View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5129-Insertion-6 (Length: 212)
Name: NF5129-Insertion-6
Description: NF5129
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5129-Insertion-6 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 201; Significance: 1e-110; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 8 - 212
Target Start/End: Original strand, 38310736 - 38310940
Alignment:
| Q |
8 |
aaaagtgcttcttttacgtgattgcttgcatagtaagcacatgtatttgttaggtagcataaatgcagcctcaatttgcacttacatttgtgtgctatcc |
107 |
Q |
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| T |
38310736 |
aaaagtgcttcttttacgtgattgcttgcatagtaagcacatgtatttgttaggtagcataaatgcagcctcaatttgcacttacatttgtgtgctatca |
38310835 |
T |
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| Q |
108 |
ccatttttactatttaattaatgttcatgtgctacctagttcgcataataaatttagcaaccaaagctttgaatgtgactgccattaataccttctcttg |
207 |
Q |
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| T |
38310836 |
ccatttttactatttaattaatgttcatgtgctacctagttcgcataataaatttagcaaccaaagctttgaatgtgactgccattaataccttctcttg |
38310935 |
T |
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| Q |
208 |
catag |
212 |
Q |
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| T |
38310936 |
catag |
38310940 |
T |
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