View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5129_high_4 (Length: 321)
Name: NF5129_high_4
Description: NF5129
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5129_high_4 |
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Alignment Details
Target: chr8 (Bit Score: 284; Significance: 1e-159; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 284; E-Value: 1e-159
Query Start/End: Original strand, 24 - 307
Target Start/End: Original strand, 33203121 - 33203404
Alignment:
| Q |
24 |
gttgtgctacgaaccgaggtccgttctcgagctttgtcgtagccctagcccagaaaagaaaccatctcaacaagaacaagaacataatccagaagtggaa |
123 |
Q |
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| T |
33203121 |
gttgtgctacgaaccgaggtccgttctcgagctttgtcgtagccctagcccagaaaagaaaccatctcaacaagaacaagaacataatccagaagtggaa |
33203220 |
T |
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| Q |
124 |
caagaggatcatgcttccttgccaaatttggattggtgggattccatcatgaaagatttaggtttacaagacgactcttcaactcccataatacccctct |
223 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33203221 |
caagaggatcatgcttccttgccaaatttggattggtgggattccatcatgaaagatttaggtttacaagacgactcttcaactcccataatacccctct |
33203320 |
T |
|
| Q |
224 |
tgaaaaacaccaataatacctcagaaatttaccctaacccttctcaagatcaatttgatcaaactcaagacttcacttctctgt |
307 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33203321 |
tgaaaaacaccaataatacctcagaaatttaccctaacccttctcaagatcaatttgatcaaactcaagacttcacttctctgt |
33203404 |
T |
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