View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5129_high_6 (Length: 294)
Name: NF5129_high_6
Description: NF5129
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5129_high_6 |
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Alignment Details
Target: chr5 (Bit Score: 270; Significance: 1e-151; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 1 - 274
Target Start/End: Complemental strand, 314362 - 314089
Alignment:
| Q |
1 |
acgcggcaacaagtgaaggagaagatgtcgatggagggaagcgatgataatcgatggcagtcttacaacaccgtttacactagcgcgaaagcaggaatgg |
100 |
Q |
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| T |
314362 |
acgcggcaacaagtgaaagagaagatgtcgatggagggaagcgatgataatcgatggcagtcttacaacaccgtttacactagcgcgaaagcaggaatgg |
314263 |
T |
|
| Q |
101 |
aaggtgttgacaaagaaaaagtacaaaggattgtttatgaaatgagcaaaggatccaaatattttcagaatgaggaaaggaaggagtcttttatcaaata |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
314262 |
aaggtgttgacaaagaaaaagtacaaaggattgtttatgaaatgagcaaaggatccaaatattttcagaatgaggaaaggaaggagtcttttatcaaata |
314163 |
T |
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| Q |
201 |
caaagttcaaaacatgcgtcttcacttttcaaaccttacacactctgatttatcacattatcaaaaggtaacat |
274 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
314162 |
caaagttcaaaacatgcgtcttcacttttcaaaccttacacactctgatttatcacattatcaaaaggtaacat |
314089 |
T |
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