View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5130-Insertion-7 (Length: 645)

Name: NF5130-Insertion-7
Description: NF5130
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5130-Insertion-7
NF5130-Insertion-7
[»] chr6 (19 HSPs)
chr6 (161-595)||(7974797-7975239)
chr6 (8-86)||(7975314-7975392)
chr6 (593-645)||(13196775-13196827)
chr6 (593-645)||(23834497-23834549)
chr6 (593-645)||(33682903-33682955)
chr6 (592-645)||(14032579-14032632)
chr6 (593-645)||(27563226-27563277)
chr6 (592-645)||(28360547-28360600)
chr6 (592-626)||(29096179-29096213)
chr6 (590-631)||(5295351-5295392)
chr6 (195-247)||(12352594-12352646)
chr6 (592-631)||(21717657-21717696)
chr6 (592-631)||(21725493-21725532)
chr6 (590-620)||(7428729-7428759)
chr6 (590-620)||(24514582-24514612)
chr6 (593-626)||(9100779-9100812)
chr6 (591-620)||(14595420-14595449)
chr6 (593-630)||(19726004-19726041)
chr6 (195-247)||(18677634-18677686)
[»] chr8 (20 HSPs)
chr8 (590-645)||(31568520-31568575)
chr8 (591-645)||(31573741-31573795)
chr8 (592-645)||(1805180-1805233)
chr8 (593-645)||(36798813-36798865)
chr8 (592-645)||(18682213-18682267)
chr8 (592-645)||(18727775-18727829)
chr8 (593-645)||(9273884-9273936)
chr8 (593-645)||(2374073-2374125)
chr8 (590-635)||(22055167-22055212)
chr8 (590-629)||(21322995-21323034)
chr8 (590-629)||(22176637-22176676)
chr8 (592-630)||(22064329-22064367)
chr8 (592-630)||(29644331-29644369)
chr8 (590-635)||(22049649-22049694)
chr8 (593-626)||(23771202-23771235)
chr8 (595-624)||(44430780-44430809)
chr8 (593-629)||(8415675-8415711)
chr8 (590-630)||(22026718-22026758)
chr8 (592-620)||(23373770-23373798)
chr8 (195-247)||(39038609-39038661)
[»] chr5 (13 HSPs)
chr5 (590-645)||(17265494-17265549)
chr5 (593-645)||(22174549-22174601)
chr5 (592-645)||(17271976-17272029)
chr5 (592-645)||(21678952-21679005)
chr5 (592-626)||(24931635-24931669)
chr5 (592-632)||(6728995-6729035)
chr5 (195-247)||(14404600-14404652)
chr5 (593-629)||(22759946-22759982)
chr5 (591-629)||(758993-759031)
chr5 (590-620)||(22466094-22466124)
chr5 (593-631)||(22509896-22509934)
chr5 (593-631)||(30344891-30344929)
chr5 (592-630)||(34828399-34828437)
[»] chr4 (19 HSPs)
chr4 (590-645)||(53749439-53749494)
chr4 (592-645)||(636465-636518)
chr4 (593-645)||(15797410-15797462)
chr4 (593-645)||(41800638-41800690)
chr4 (593-645)||(42700664-42700716)
chr4 (590-645)||(51602759-51602816)
chr4 (594-645)||(51608640-51608693)
chr4 (593-645)||(14508626-14508678)
chr4 (592-636)||(14479863-14479907)
chr4 (591-629)||(16220630-16220668)
chr4 (592-630)||(16750270-16750308)
chr4 (592-630)||(23120993-23121031)
chr4 (593-630)||(11171989-11172026)
chr4 (592-629)||(17000911-17000948)
chr4 (593-629)||(14062313-14062349)
chr4 (593-629)||(15154090-15154126)
chr4 (556-595)||(17480931-17480971)
chr4 (593-645)||(20939681-20939733)
chr4 (591-631)||(23725547-23725587)
[»] chr3 (23 HSPs)
chr3 (590-645)||(8743595-8743650)
chr3 (592-645)||(13908953-13909006)
chr3 (593-645)||(4676602-4676654)
chr3 (593-645)||(8761765-8761817)
chr3 (590-645)||(41180049-41180104)
chr3 (592-645)||(41174913-41174966)
chr3 (593-645)||(13939413-13939465)
chr3 (590-645)||(13945896-13945951)
chr3 (590-645)||(44779822-44779877)
chr3 (591-645)||(44774639-44774693)
chr3 (593-645)||(16323569-16323621)
chr3 (590-642)||(16383588-16383640)
chr3 (593-624)||(4679409-4679440)
chr3 (592-635)||(17706554-17706597)
chr3 (593-631)||(11851471-11851509)
chr3 (593-631)||(20187027-20187065)
chr3 (593-630)||(13435099-13435136)
chr3 (591-620)||(14649018-14649047)
chr3 (591-620)||(45221533-45221562)
chr3 (195-247)||(5026976-5027028)
chr3 (593-629)||(12254522-12254558)
chr3 (593-645)||(17199756-17199808)
chr3 (195-247)||(39925683-39925735)
[»] chr2 (16 HSPs)
chr2 (590-645)||(12571746-12571801)
chr2 (590-645)||(12578228-12578283)
chr2 (592-645)||(27296704-27296757)
chr2 (590-629)||(27790343-27790382)
chr2 (585-630)||(26883518-26883563)
chr2 (593-629)||(27785125-27785161)
chr2 (590-629)||(23296908-23296947)
chr2 (556-595)||(31525041-31525080)
chr2 (195-319)||(20726980-20727104)
chr2 (592-620)||(8891-8919)
chr2 (592-620)||(8688167-8688195)
chr2 (593-629)||(19792020-19792056)
chr2 (593-629)||(24942795-24942831)
chr2 (593-629)||(25036836-25036872)
chr2 (593-629)||(25040943-25040979)
chr2 (592-620)||(29280310-29280338)
[»] scaffold1156 (1 HSPs)
scaffold1156 (592-645)||(5-58)
[»] chr7 (18 HSPs)
chr7 (592-645)||(807685-807738)
chr7 (593-645)||(11632627-11632679)
chr7 (590-645)||(23202202-23202257)
chr7 (590-645)||(23508329-23508384)
chr7 (590-645)||(18049916-18049972)
chr7 (593-645)||(20580629-20580681)
chr7 (590-645)||(23073646-23073702)
chr7 (593-645)||(18056396-18056449)
chr7 (590-645)||(14145889-14145944)
chr7 (587-620)||(10308747-10308780)
chr7 (593-645)||(14431404-14431456)
chr7 (593-629)||(35963481-35963517)
chr7 (592-631)||(15338235-15338274)
chr7 (593-630)||(1612017-1612054)
chr7 (593-630)||(14321332-14321369)
chr7 (591-620)||(38827089-38827118)
chr7 (592-620)||(11395449-11395477)
chr7 (592-620)||(16089390-16089418)
[»] scaffold0124 (2 HSPs)
scaffold0124 (593-645)||(9046-9098)
scaffold0124 (593-645)||(44716-44767)
[»] scaffold0015 (2 HSPs)
scaffold0015 (593-645)||(60447-60499)
scaffold0015 (593-629)||(172550-172586)
[»] scaffold0013 (1 HSPs)
scaffold0013 (593-645)||(111362-111414)
[»] scaffold0596 (1 HSPs)
scaffold0596 (592-645)||(239-292)
[»] scaffold0211 (1 HSPs)
scaffold0211 (593-645)||(29718-29770)
[»] scaffold0076 (1 HSPs)
scaffold0076 (593-645)||(61323-61375)
[»] scaffold0039 (1 HSPs)
scaffold0039 (593-645)||(94338-94390)
[»] scaffold1914 (1 HSPs)
scaffold1914 (590-645)||(208-263)
[»] scaffold0001 (3 HSPs)
scaffold0001 (592-645)||(178860-178914)
scaffold0001 (593-645)||(525473-525526)
scaffold0001 (593-630)||(494729-494766)
[»] scaffold0100 (1 HSPs)
scaffold0100 (593-645)||(218-271)
[»] chr1 (8 HSPs)
chr1 (593-645)||(27279616-27279669)
chr1 (592-629)||(2341759-2341796)
chr1 (195-319)||(21198439-21198563)
chr1 (590-632)||(19858558-19858600)
chr1 (591-620)||(21704591-21704620)
chr1 (592-620)||(20032744-20032772)
chr1 (592-620)||(23067456-23067484)
chr1 (593-629)||(29555182-29555218)
[»] scaffold0014 (1 HSPs)
scaffold0014 (593-645)||(456-508)
[»] scaffold1311 (1 HSPs)
scaffold1311 (593-645)||(1725-1777)
[»] scaffold0004 (2 HSPs)
scaffold0004 (195-319)||(113021-113145)
scaffold0004 (195-247)||(353741-353793)
[»] scaffold0005 (2 HSPs)
scaffold0005 (590-629)||(264496-264535)
scaffold0005 (593-629)||(258134-258170)
[»] scaffold0546 (1 HSPs)
scaffold0546 (592-629)||(10498-10535)
[»] scaffold0109 (1 HSPs)
scaffold0109 (592-629)||(1266-1303)
[»] scaffold0149 (1 HSPs)
scaffold0149 (590-629)||(39076-39115)
[»] scaffold0074 (1 HSPs)
scaffold0074 (590-629)||(16338-16377)
[»] scaffold0067 (3 HSPs)
scaffold0067 (590-629)||(48179-48218)
scaffold0067 (590-629)||(57213-57252)
scaffold0067 (590-629)||(63599-63638)
[»] scaffold0046 (1 HSPs)
scaffold0046 (590-645)||(79106-79161)
[»] scaffold0003 (2 HSPs)
scaffold0003 (592-631)||(194501-194540)
scaffold0003 (591-624)||(136775-136808)
[»] scaffold0679 (1 HSPs)
scaffold0679 (590-620)||(40-70)
[»] scaffold0326 (1 HSPs)
scaffold0326 (593-631)||(16990-17028)
[»] scaffold0235 (2 HSPs)
scaffold0235 (590-620)||(7476-7506)
scaffold0235 (590-620)||(17690-17720)
[»] scaffold0098 (1 HSPs)
scaffold0098 (590-620)||(26727-26757)
[»] scaffold0053 (1 HSPs)
scaffold0053 (590-620)||(81215-81245)
[»] scaffold0025 (1 HSPs)
scaffold0025 (593-635)||(16186-16228)
[»] scaffold0609 (1 HSPs)
scaffold0609 (591-620)||(626-655)
[»] scaffold0220 (1 HSPs)
scaffold0220 (593-630)||(9755-9792)
[»] scaffold0213 (1 HSPs)
scaffold0213 (593-630)||(6672-6709)
[»] scaffold0160 (1 HSPs)
scaffold0160 (592-629)||(7568-7605)
[»] scaffold0126 (1 HSPs)
scaffold0126 (592-629)||(37797-37834)
[»] scaffold0097 (1 HSPs)
scaffold0097 (195-319)||(30809-30933)
[»] scaffold0063 (1 HSPs)
scaffold0063 (593-630)||(13407-13444)
[»] scaffold0023 (1 HSPs)
scaffold0023 (593-630)||(21191-21228)
[»] scaffold0021 (1 HSPs)
scaffold0021 (592-629)||(140728-140765)
[»] scaffold0706 (1 HSPs)
scaffold0706 (593-629)||(4067-4103)
[»] scaffold0303 (1 HSPs)
scaffold0303 (195-247)||(21277-21329)
[»] scaffold0258 (1 HSPs)
scaffold0258 (592-620)||(24930-24958)
[»] scaffold0155 (1 HSPs)
scaffold0155 (592-620)||(196-224)
[»] scaffold0031 (1 HSPs)
scaffold0031 (195-247)||(89138-89190)
[»] scaffold0011 (2 HSPs)
scaffold0011 (593-629)||(151778-151814)
scaffold0011 (593-629)||(257898-257934)


Alignment Details
Target: chr6 (Bit Score: 324; Significance: 0; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 324; E-Value: 0
Query Start/End: Original strand, 161 - 595
Target Start/End: Complemental strand, 7975239 - 7974797
Alignment:
Q  161 tttattatgttccggcccaaaacaataggatatgcgtctagtcccaaaggaaaagtaccttgagattttaactaaccaagtttttaatacaggatgagtt 260  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| ||| |||||||||||||||||| |    
T  7975239 tttattatgttccggcccaaaacaataggatatgcatctagtcccaaaggaaaagcaccttgagattttaactaatcaaatttttaatacaggatgagct 7975140  T
Q  261 taaacctttagaaaaagacgagaactcttcaaacaaaactatcatttatagaagagtctttaatatcacctctgttgaaaccttgagattatacccaaaa 360  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  7975139 taaacctttagaaaaagacgagaacttttcaaacaaaactatcatttatagaagagtctttaatatcacctctcttaaaaccttgagattatacccaaaa 7975040  T
Q  361 tattacaaataaaagaaataagagattataccaaatgtattaatataaaacaaattgaagcactagttcataatacaactcaattatgtagtataaaagt 460  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||     
T  7975039 tattacaaataaaagaaatacgagattataccaaatgtattaatataaaacaaattgaagcacaagttcataatacaactcaactatgtagtataaaagg 7974940  T
Q  461 ctctcaa-aaaatataagtgtaaaaataataagagtgatgaataannnnnnngttatattgtaaaaaatataagtatagatactatat-------ataaa 552  Q
    ||||||| |||||||||||||||||||||||||||| ||||||||       ||||||||||||||||||||||||||||||||||||       |||||    
T  7974939 ctctcaaaaaaatataagtgtaaaaataataagagttatgaataatttttttgttatattgtaaaaaatataagtatagatactatatataaagaataaa 7974840  T
Q  553 gagtccacaagttctatctcaactgacaaaatgccaaaattgt 595  Q
    |||||||||||| ||| |||||||||||||||||| |||||||    
T  7974839 gagtccacaagtcctacctcaactgacaaaatgccgaaattgt 7974797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 8 - 86
Target Start/End: Complemental strand, 7975392 - 7975314
Alignment:
Q  8 gaattgtgatctttaaaacgtttaaaaaataggcacttaagaaatattataacaaaaacaaagtacttcgaaaagtttc 86  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||    
T  7975392 gaattgtgatctttaaaacgtttaaaaaataggcacttaagaaatattataacaaaaaaaaagtacttctaaaagtttc 7975314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 593 - 645
Target Start/End: Original strand, 13196775 - 13196827
Alignment:
Q  593 tgtaacaccccgtttcccaaaatcaatttaattataattataaaatcagagtt 645  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13196775 tgtaacaccccgtttcccaaaatcaatttaattataattataaaatcagagtt 13196827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 593 - 645
Target Start/End: Original strand, 23834497 - 23834549
Alignment:
Q  593 tgtaacaccccgtttcccaaaatcaatttaattataattataaaatcagagtt 645  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23834497 tgtaacaccccgtttcccaaaatcaatttaattataattataaaatcagagtt 23834549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 593 - 645
Target Start/End: Complemental strand, 33682955 - 33682903
Alignment:
Q  593 tgtaacaccccgtttcccaaaatcaatttaattataattataaaatcagagtt 645  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33682955 tgtaacaccccgtttcccaaaatcaatttaattataattataaaatcagagtt 33682903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 592 - 645
Target Start/End: Original strand, 14032579 - 14032632
Alignment:
Q  592 ttgtaacaccccgtttcccaaaatcaatttaattataattataaaatcagagtt 645  Q
    |||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  14032579 ttgtaacaccccgtttcccaaaatcaatttaattatagatataaaatcagagtt 14032632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 593 - 645
Target Start/End: Complemental strand, 27563277 - 27563226
Alignment:
Q  593 tgtaacaccccgtttcccaaaatcaatttaattataattataaaatcagagtt 645  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  27563277 tgtaacaccccgtttcccaaaatcaatttaattataa-tataaaatcagagtt 27563226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 592 - 645
Target Start/End: Complemental strand, 28360600 - 28360547
Alignment:
Q  592 ttgtaacaccccgtttccc-aaaatcaatttaattataattataaaatcagagtt 645  Q
    ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||    
T  28360600 ttgtaacaccccgtttcccaaaaatcaatttaattataa-tataaaatcagagtt 28360547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 592 - 626
Target Start/End: Original strand, 29096179 - 29096213
Alignment:
Q  592 ttgtaacaccccgtttcccaaaatcaatttaatta 626  Q
    |||||||||||||||||||||||||||||||||||    
T  29096179 ttgtaacaccccgtttcccaaaatcaatttaatta 29096213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 590 - 631
Target Start/End: Complemental strand, 5295392 - 5295351
Alignment:
Q  590 aattgtaacaccccgtttcccaaaatcaatttaattataatt 631  Q
    ||||||||||||||||||||||||||||||| ||| ||||||    
T  5295392 aattgtaacaccccgtttcccaaaatcaattaaataataatt 5295351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 195 - 247
Target Start/End: Complemental strand, 12352646 - 12352594
Alignment:
Q  195 cgtctagtcccaaaggaaaagtaccttgagattttaactaaccaagtttttaa 247  Q
    ||||||||||| |||||||||| |||||||||||| ||||||| || ||||||    
T  12352646 cgtctagtccccaaggaaaagtcccttgagattttcactaacctagcttttaa 12352594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 592 - 631
Target Start/End: Complemental strand, 21717696 - 21717657
Alignment:
Q  592 ttgtaacaccccgtttcccaaaatcaatttaattataatt 631  Q
    ||||||||||||||||||||||||||||| ||| ||||||    
T  21717696 ttgtaacaccccgtttcccaaaatcaattaaataataatt 21717657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 592 - 631
Target Start/End: Complemental strand, 21725532 - 21725493
Alignment:
Q  592 ttgtaacaccccgtttcccaaaatcaatttaattataatt 631  Q
    ||||||||||||||||||||||||||||| ||| ||||||    
T  21725532 ttgtaacaccccgtttcccaaaatcaattaaataataatt 21725493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 590 - 620
Target Start/End: Original strand, 7428729 - 7428759
Alignment:
Q  590 aattgtaacaccccgtttcccaaaatcaatt 620  Q
    |||||||||||||||||||||||||||||||    
T  7428729 aattgtaacaccccgtttcccaaaatcaatt 7428759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 590 - 620
Target Start/End: Complemental strand, 24514612 - 24514582
Alignment:
Q  590 aattgtaacaccccgtttcccaaaatcaatt 620  Q
    |||||||||||||||||||||||||||||||    
T  24514612 aattgtaacaccccgtttcccaaaatcaatt 24514582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 593 - 626
Target Start/End: Complemental strand, 9100812 - 9100779
Alignment:
Q  593 tgtaacaccccgtttcccaaaatcaatttaatta 626  Q
    |||||||||||||| |||||||||||||||||||    
T  9100812 tgtaacaccccgttccccaaaatcaatttaatta 9100779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 591 - 620
Target Start/End: Complemental strand, 14595449 - 14595420
Alignment:
Q  591 attgtaacaccccgtttcccaaaatcaatt 620  Q
    ||||||||||||||||||||||||||||||    
T  14595449 attgtaacaccccgtttcccaaaatcaatt 14595420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 593 - 630
Target Start/End: Original strand, 19726004 - 19726041
Alignment:
Q  593 tgtaacaccccgtttcccaaaatcaatttaattataat 630  Q
    |||||||||||||||||||||||||||| ||| |||||    
T  19726004 tgtaacaccccgtttcccaaaatcaattaaataataat 19726041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 195 - 247
Target Start/End: Complemental strand, 18677686 - 18677634
Alignment:
Q  195 cgtctagtcccaaaggaaaagtaccttgagattttaactaaccaagtttttaa 247  Q
    ||||||||||| |||||||||  |||||||||||| ||||||| || ||||||    
T  18677686 cgtctagtccccaaggaaaagccccttgagattttcactaacctagcttttaa 18677634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 56; Significance: 7e-23; HSPs: 20)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 590 - 645
Target Start/End: Complemental strand, 31568575 - 31568520
Alignment:
Q  590 aattgtaacaccccgtttcccaaaatcaatttaattataattataaaatcagagtt 645  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31568575 aattgtaacaccccgtttcccaaaatcaatttaattataattataaaatcagagtt 31568520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 591 - 645
Target Start/End: Complemental strand, 31573795 - 31573741
Alignment:
Q  591 attgtaacaccccgtttcccaaaatcaatttaattataattataaaatcagagtt 645  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31573795 attgtaacaccccgtttcccaaaatcaatttaattataattataaaatcagagtt 31573741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 592 - 645
Target Start/End: Complemental strand, 1805233 - 1805180
Alignment:
Q  592 ttgtaacaccccgtttcccaaaatcaatttaattataattataaaatcagagtt 645  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1805233 ttgtaacaccccgtttcccaaaatcaatttaattataattataaaatcagagtt 1805180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 593 - 645
Target Start/End: Original strand, 36798813 - 36798865
Alignment:
Q  593 tgtaacaccccgtttcccaaaatcaatttaattataattataaaatcagagtt 645  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36798813 tgtaacaccccgtttcccaaaatcaatttaattataattataaaatcagagtt 36798865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 592 - 645
Target Start/End: Complemental strand, 18682267 - 18682213
Alignment:
Q  592 ttgtaacaccccgtttcccaaaatcaatttaattat-aattataaaatcagagtt 645  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  18682267 ttgtaacaccccgtttcccaaaatcaatttaattataaattataaaatcagagtt 18682213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 592 - 645
Target Start/End: Complemental strand, 18727829 - 18727775
Alignment:
Q  592 ttgtaacaccccgtttcccaaaatcaatttaattat-aattataaaatcagagtt 645  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  18727829 ttgtaacaccccgtttcccaaaatcaatttaattataaattataaaatcagagtt 18727775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 593 - 645
Target Start/End: Complemental strand, 9273936 - 9273884
Alignment:
Q  593 tgtaacaccccgtttcccaaaatcaatttaattataattataaaatcagagtt 645  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  9273936 tgtaacaccccgtttcccataatcaatttaattataatcataaaatcagagtt 9273884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 593 - 645
Target Start/End: Complemental strand, 2374125 - 2374073
Alignment:
Q  593 tgtaacaccccgtttccc-aaaatcaatttaattataattataaaatcagagtt 645  Q
    |||||||||||||||||| ||||||||||||||||||| |||||||||||||||    
T  2374125 tgtaacaccccgtttcccaaaaatcaatttaattataa-tataaaatcagagtt 2374073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 590 - 635
Target Start/End: Original strand, 22055167 - 22055212
Alignment:
Q  590 aattgtaacaccccgtttcccaaaatcaatttaattataattataa 635  Q
    ||||||||||||||||||||||||||||||| ||| ||||| ||||    
T  22055167 aattgtaacaccccgtttcccaaaatcaattaaataataataataa 22055212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 590 - 629
Target Start/End: Complemental strand, 21323034 - 21322995
Alignment:
Q  590 aattgtaacaccccgtttcccaaaatcaatttaattataa 629  Q
    ||||||||||||||||| ||||||||||||||||| ||||    
T  21323034 aattgtaacaccccgttacccaaaatcaatttaataataa 21322995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 590 - 629
Target Start/End: Complemental strand, 22176676 - 22176637
Alignment:
Q  590 aattgtaacaccccgtttcccaaaatcaatttaattataa 629  Q
    ||||||||||||||||| ||||||||||||||||| ||||    
T  22176676 aattgtaacaccccgttacccaaaatcaatttaataataa 22176637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 592 - 630
Target Start/End: Complemental strand, 22064367 - 22064329
Alignment:
Q  592 ttgtaacaccccgtttcccaaaatcaatttaattataat 630  Q
    ||||||||||||||||||||||||||||| ||| |||||    
T  22064367 ttgtaacaccccgtttcccaaaatcaattaaataataat 22064329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 592 - 630
Target Start/End: Complemental strand, 29644369 - 29644331
Alignment:
Q  592 ttgtaacaccccgtttcccaaaatcaatttaattataat 630  Q
    ||||||||||||||||||||||||||||| ||| |||||    
T  29644369 ttgtaacaccccgtttcccaaaatcaattaaataataat 29644331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 590 - 635
Target Start/End: Original strand, 22049649 - 22049694
Alignment:
Q  590 aattgtaacaccccgtttcccaaaatcaatttaattataattataa 635  Q
    |||||||||||||| |||||||||||||||| ||| ||||| ||||    
T  22049649 aattgtaacaccccatttcccaaaatcaattaaataataataataa 22049694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 593 - 626
Target Start/End: Original strand, 23771202 - 23771235
Alignment:
Q  593 tgtaacaccccgtttcccaaaatcaatttaatta 626  Q
    ||||||||||||||| ||||||||||||||||||    
T  23771202 tgtaacaccccgttttccaaaatcaatttaatta 23771235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 595 - 624
Target Start/End: Original strand, 44430780 - 44430809
Alignment:
Q  595 taacaccccgtttcccaaaatcaatttaat 624  Q
    ||||||||||||||||||||||||||||||    
T  44430780 taacaccccgtttcccaaaatcaatttaat 44430809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 593 - 629
Target Start/End: Complemental strand, 8415711 - 8415675
Alignment:
Q  593 tgtaacaccccgtttcccaaaatcaatttaattataa 629  Q
    ||||||||||||||| |||||||||||||||| ||||    
T  8415711 tgtaacaccccgttttccaaaatcaatttaataataa 8415675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 590 - 630
Target Start/End: Complemental strand, 22026758 - 22026718
Alignment:
Q  590 aattgtaacaccccgtttcccaaaatcaatttaattataat 630  Q
    ||||||||||||| ||||||||||||||||| ||| |||||    
T  22026758 aattgtaacaccctgtttcccaaaatcaattaaataataat 22026718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 592 - 620
Target Start/End: Original strand, 23373770 - 23373798
Alignment:
Q  592 ttgtaacaccccgtttcccaaaatcaatt 620  Q
    |||||||||||||||||||||||||||||    
T  23373770 ttgtaacaccccgtttcccaaaatcaatt 23373798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 195 - 247
Target Start/End: Complemental strand, 39038661 - 39038609
Alignment:
Q  195 cgtctagtcccaaaggaaaagtaccttgagattttaactaaccaagtttttaa 247  Q
    ||||||||||| |||||||||  |||||||||||| ||||||| || ||||||    
T  39038661 cgtctagtccccaaggaaaagccccttgagattttcactaacctagcttttaa 39038609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 56; Significance: 7e-23; HSPs: 13)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 590 - 645
Target Start/End: Complemental strand, 17265549 - 17265494
Alignment:
Q  590 aattgtaacaccccgtttcccaaaatcaatttaattataattataaaatcagagtt 645  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17265549 aattgtaacaccccgtttcccaaaatcaatttaattataattataaaatcagagtt 17265494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 593 - 645
Target Start/End: Original strand, 22174549 - 22174601
Alignment:
Q  593 tgtaacaccccgtttcccaaaatcaatttaattataattataaaatcagagtt 645  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22174549 tgtaacaccccgtttcccaaaatcaatttaattataattataaaatcagagtt 22174601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 592 - 645
Target Start/End: Complemental strand, 17272029 - 17271976
Alignment:
Q  592 ttgtaacaccccgtttcccaaaatcaatttaattataattataaaatcagagtt 645  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  17272029 ttgtaacaccccgtttcccaaaatcaatttaattataattataaaatcaaagtt 17271976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 592 - 645
Target Start/End: Complemental strand, 21679005 - 21678952
Alignment:
Q  592 ttgtaacaccccgtttcccaaaatcaatttaattataattataaaatcagagtt 645  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  21679005 ttgtaacaccccgtttcccaaaatcaatttaattatagttataaaatcagagtt 21678952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 592 - 626
Target Start/End: Complemental strand, 24931669 - 24931635
Alignment:
Q  592 ttgtaacaccccgtttcccaaaatcaatttaatta 626  Q
    |||||||||||||||||||||||||||||||||||    
T  24931669 ttgtaacaccccgtttcccaaaatcaatttaatta 24931635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 592 - 632
Target Start/End: Complemental strand, 6729035 - 6728995
Alignment:
Q  592 ttgtaacaccccgtttcccaaaatcaatttaattataatta 632  Q
    ||||||||||||||| ||||||||||||||||| |||||||    
T  6729035 ttgtaacaccccgttacccaaaatcaatttaataataatta 6728995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 195 - 247
Target Start/End: Original strand, 14404600 - 14404652
Alignment:
Q  195 cgtctagtcccaaaggaaaagtaccttgagattttaactaaccaagtttttaa 247  Q
    ||||||||||| |||||||||| |||||||||||| ||||||| || ||||||    
T  14404600 cgtctagtccccaaggaaaagtcccttgagattttcactaacctagcttttaa 14404652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 593 - 629
Target Start/End: Complemental strand, 22759982 - 22759946
Alignment:
Q  593 tgtaacaccccgtttcccaaaatcaatttaattataa 629  Q
    |||||||||||||||||||||||||||||||| ||||    
T  22759982 tgtaacaccccgtttcccaaaatcaatttaataataa 22759946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 591 - 629
Target Start/End: Complemental strand, 759031 - 758993
Alignment:
Q  591 attgtaacaccccgtttcccaaaatcaatttaattataa 629  Q
    ||||||||||||||||| |||||||||||||||| ||||    
T  759031 attgtaacaccccgttttccaaaatcaatttaataataa 758993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 590 - 620
Target Start/End: Original strand, 22466094 - 22466124
Alignment:
Q  590 aattgtaacaccccgtttcccaaaatcaatt 620  Q
    |||||||||||||||||||||||||||||||    
T  22466094 aattgtaacaccccgtttcccaaaatcaatt 22466124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 593 - 631
Target Start/End: Complemental strand, 22509934 - 22509896
Alignment:
Q  593 tgtaacaccccgtttcccaaaatcaatttaattataatt 631  Q
    |||||||||||||||||||||||||||| ||| ||||||    
T  22509934 tgtaacaccccgtttcccaaaatcaattaaataataatt 22509896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 593 - 631
Target Start/End: Complemental strand, 30344929 - 30344891
Alignment:
Q  593 tgtaacaccccgtttcccaaaatcaatttaattataatt 631  Q
    |||||||||||||||||||||||||||| ||| ||||||    
T  30344929 tgtaacaccccgtttcccaaaatcaattaaataataatt 30344891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 592 - 630
Target Start/End: Original strand, 34828399 - 34828437
Alignment:
Q  592 ttgtaacaccccgtttcccaaaatcaatttaattataat 630  Q
    ||||||||||||||||||||||||||||| ||| |||||    
T  34828399 ttgtaacaccccgtttcccaaaatcaattaaataataat 34828437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 56; Significance: 7e-23; HSPs: 19)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 590 - 645
Target Start/End: Complemental strand, 53749494 - 53749439
Alignment:
Q  590 aattgtaacaccccgtttcccaaaatcaatttaattataattataaaatcagagtt 645  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53749494 aattgtaacaccccgtttcccaaaatcaatttaattataattataaaatcagagtt 53749439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 592 - 645
Target Start/End: Complemental strand, 636518 - 636465
Alignment:
Q  592 ttgtaacaccccgtttcccaaaatcaatttaattataattataaaatcagagtt 645  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  636518 ttgtaacaccccgtttcccaaaatcaatttaattataattataaaatcagagtt 636465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 593 - 645
Target Start/End: Original strand, 15797410 - 15797462
Alignment:
Q  593 tgtaacaccccgtttcccaaaatcaatttaattataattataaaatcagagtt 645  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15797410 tgtaacaccccgtttcccaaaatcaatttaattataattataaaatcagagtt 15797462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 593 - 645
Target Start/End: Complemental strand, 41800690 - 41800638
Alignment:
Q  593 tgtaacaccccgtttcccaaaatcaatttaattataattataaaatcagagtt 645  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41800690 tgtaacaccccgtttcccaaaatcaatttaattataattataaaatcagagtt 41800638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 593 - 645
Target Start/End: Original strand, 42700664 - 42700716
Alignment:
Q  593 tgtaacaccccgtttcccaaaatcaatttaattataattataaaatcagagtt 645  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42700664 tgtaacaccccgtttcccaaaatcaatttaattataattataaaatcagagtt 42700716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 590 - 645
Target Start/End: Complemental strand, 51602816 - 51602759
Alignment:
Q  590 aattgtaacaccccgtttcccaaaatcaatttaattat-aattat-aaaatcagagtt 645  Q
    |||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||    
T  51602816 aattgtaacaccccgtttcccaaaatcaatttaattataaattataaaaatcagagtt 51602759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 594 - 645
Target Start/End: Complemental strand, 51608693 - 51608640
Alignment:
Q  594 gtaacaccccgtttcccaaaatcaatttaattat-aattat-aaaatcagagtt 645  Q
    |||||||||||||||||||||||||||||||||| |||||| ||||||||||||    
T  51608693 gtaacaccccgtttcccaaaatcaatttaattataaattataaaaatcagagtt 51608640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 593 - 645
Target Start/End: Complemental strand, 14508678 - 14508626
Alignment:
Q  593 tgtaacaccccgtttcccaaaatcaatttaattataattataaaatcagagtt 645  Q
    ||||||||||||||||||||||||| |||||| |||| ||||| |||||||||    
T  14508678 tgtaacaccccgtttcccaaaatcactttaataataaatataatatcagagtt 14508626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 592 - 636
Target Start/End: Original strand, 14479863 - 14479907
Alignment:
Q  592 ttgtaacaccccgtttcccaaaatcaatttaattataattataaa 636  Q
    ||||||||||||||| ||||||||||||| ||| |||||||||||    
T  14479863 ttgtaacaccccgttgcccaaaatcaattaaatgataattataaa 14479907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 591 - 629
Target Start/End: Original strand, 16220630 - 16220668
Alignment:
Q  591 attgtaacaccccgtttcccaaaatcaatttaattataa 629  Q
    |||||||||||||||| ||||||||||||||||| ||||    
T  16220630 attgtaacaccccgttacccaaaatcaatttaataataa 16220668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 592 - 630
Target Start/End: Original strand, 16750270 - 16750308
Alignment:
Q  592 ttgtaacaccccgtttcccaaaatcaatttaattataat 630  Q
    ||||||||||||||||||||||||||||| ||| |||||    
T  16750270 ttgtaacaccccgtttcccaaaatcaattaaataataat 16750308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 592 - 630
Target Start/End: Original strand, 23120993 - 23121031
Alignment:
Q  592 ttgtaacaccccgtttcccaaaatcaatttaattataat 630  Q
    ||||||||||||||||||||||||||||| ||| |||||    
T  23120993 ttgtaacaccccgtttcccaaaatcaattaaataataat 23121031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 593 - 630
Target Start/End: Complemental strand, 11172026 - 11171989
Alignment:
Q  593 tgtaacaccccgtttcccaaaatcaatttaattataat 630  Q
    |||||||||||||||||||||||||||| ||| |||||    
T  11172026 tgtaacaccccgtttcccaaaatcaattaaataataat 11171989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 592 - 629
Target Start/End: Complemental strand, 17000948 - 17000911
Alignment:
Q  592 ttgtaacaccccgtttcccaaaatcaatttaattataa 629  Q
    ||||||||||||||||||||||||||||| ||| ||||    
T  17000948 ttgtaacaccccgtttcccaaaatcaattaaataataa 17000911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 593 - 629
Target Start/End: Original strand, 14062313 - 14062349
Alignment:
Q  593 tgtaacaccccgtttcccaaaatcaatttaattataa 629  Q
    |||||||||||||| ||||||||||||||||| ||||    
T  14062313 tgtaacaccccgttacccaaaatcaatttaataataa 14062349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 593 - 629
Target Start/End: Complemental strand, 15154126 - 15154090
Alignment:
Q  593 tgtaacaccccgtttcccaaaatcaatttaattataa 629  Q
    |||||||||||||| ||||||||||||||||| ||||    
T  15154126 tgtaacaccccgttacccaaaatcaatttaataataa 15154090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 556 - 595
Target Start/End: Original strand, 17480931 - 17480971
Alignment:
Q  556 tccacaagttctatctcaactgac-aaaatgccaaaattgt 595  Q
    ||||||||||||| |||||||||| ||||||||||||||||    
T  17480931 tccacaagttctagctcaactgacaaaaatgccaaaattgt 17480971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 593 - 645
Target Start/End: Original strand, 20939681 - 20939733
Alignment:
Q  593 tgtaacaccccgtttcccaaaatcaatttaattataattataaaatcagagtt 645  Q
    ||||||||||||||||||||||||| |||| |  ||| ||||| |||||||||    
T  20939681 tgtaacaccccgtttcccaaaatcactttattactaaatataatatcagagtt 20939733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 591 - 631
Target Start/End: Complemental strand, 23725587 - 23725547
Alignment:
Q  591 attgtaacaccccgtttcccaaaatcaatttaattataatt 631  Q
    |||||||||||||||||||| ||||||||| ||| ||||||    
T  23725587 attgtaacaccccgtttccccaaatcaattaaataataatt 23725547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 56; Significance: 7e-23; HSPs: 23)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 590 - 645
Target Start/End: Complemental strand, 8743650 - 8743595
Alignment:
Q  590 aattgtaacaccccgtttcccaaaatcaatttaattataattataaaatcagagtt 645  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8743650 aattgtaacaccccgtttcccaaaatcaatttaattataattataaaatcagagtt 8743595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 592 - 645
Target Start/End: Original strand, 13908953 - 13909006
Alignment:
Q  592 ttgtaacaccccgtttcccaaaatcaatttaattataattataaaatcagagtt 645  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13908953 ttgtaacaccccgtttcccaaaatcaatttaattataattataaaatcagagtt 13909006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 593 - 645
Target Start/End: Original strand, 4676602 - 4676654
Alignment:
Q  593 tgtaacaccccgtttcccaaaatcaatttaattataattataaaatcagagtt 645  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4676602 tgtaacaccccgtttcccaaaatcaatttaattataattataaaatcagagtt 4676654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 593 - 645
Target Start/End: Complemental strand, 8761817 - 8761765
Alignment:
Q  593 tgtaacaccccgtttcccaaaatcaatttaattataattataaaatcagagtt 645  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8761817 tgtaacaccccgtttcccaaaatcaatttaattataattataaaatcagagtt 8761765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 590 - 645
Target Start/End: Original strand, 41180049 - 41180104
Alignment:
Q  590 aattgtaacaccccgtttcccaaaatcaatttaattataattataaaatcagagtt 645  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  41180049 aattgtaacaccccgtttcccaaaattaatttaattataattataaaatcagagtt 41180104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 592 - 645
Target Start/End: Original strand, 41174913 - 41174966
Alignment:
Q  592 ttgtaacaccccgtttcccaaaatcaatttaattataattataaaatcagagtt 645  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  41174913 ttgtaacaccccgtttcccaaaattaatttaattataattataaaatcagagtt 41174966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 593 - 645
Target Start/End: Original strand, 13939413 - 13939465
Alignment:
Q  593 tgtaacaccccgtttcccaaaatcaatttaattataattataaaatcagagtt 645  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  13939413 tgtaacacctcgtttcccaaaatcaatttaattataattataaaatcagagtt 13939465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 590 - 645
Target Start/End: Original strand, 13945896 - 13945951
Alignment:
Q  590 aattgtaacaccccgtttcccaaaatcaatttaattataattataaaatcagagtt 645  Q
    ||||||||||| |||||||||||||| |||||||||||||||||||||||||||||    
T  13945896 aattgtaacacgccgtttcccaaaataaatttaattataattataaaatcagagtt 13945951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 590 - 645
Target Start/End: Original strand, 44779822 - 44779877
Alignment:
Q  590 aattgtaacaccccgtttccc-aaaatcaatttaattataattataaaatcagagtt 645  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||    
T  44779822 aattgtaacaccccgtttcccaaaaatcaatttaattataa-tataaaatcagagtt 44779877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 591 - 645
Target Start/End: Original strand, 44774639 - 44774693
Alignment:
Q  591 attgtaacaccccgtttccc-aaaatcaatttaattataattataaaatcagagtt 645  Q
    |||||||||||||||||||| ||||||||||||||||||| |||||||||||||||    
T  44774639 attgtaacaccccgtttcccaaaaatcaatttaattataa-tataaaatcagagtt 44774693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 593 - 645
Target Start/End: Complemental strand, 16323621 - 16323569
Alignment:
Q  593 tgtaacaccccgtttcccaaaatcaatttaattataattataaaatcagagtt 645  Q
    ||||||||||||||||||||||||| |||||| |||| ||||| |||||||||    
T  16323621 tgtaacaccccgtttcccaaaatcactttaataataaatataatatcagagtt 16323569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 590 - 642
Target Start/End: Complemental strand, 16383640 - 16383588
Alignment:
Q  590 aattgtaacaccccgtttcccaaaatcaatttaattataattataaaatcaga 642  Q
    |||||||||||||||||||||||||||| || ||| |||| ||||| ||||||    
T  16383640 aattgtaacaccccgtttcccaaaatcacttcaataataaatataatatcaga 16383588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 593 - 624
Target Start/End: Complemental strand, 4679440 - 4679409
Alignment:
Q  593 tgtaacaccccgtttcccaaaatcaatttaat 624  Q
    ||||||||||||||||||||||||||||||||    
T  4679440 tgtaacaccccgtttcccaaaatcaatttaat 4679409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 592 - 635
Target Start/End: Original strand, 17706554 - 17706597
Alignment:
Q  592 ttgtaacaccccgtttcccaaaatcaatttaattataattataa 635  Q
    ||||||||||||||||||||||||||||| ||| ||||| ||||    
T  17706554 ttgtaacaccccgtttcccaaaatcaattaaataataataataa 17706597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 593 - 631
Target Start/End: Complemental strand, 11851509 - 11851471
Alignment:
Q  593 tgtaacaccccgtttcccaaaatcaatttaattataatt 631  Q
    |||||||||||||||||||||||||||| ||| ||||||    
T  11851509 tgtaacaccccgtttcccaaaatcaattaaataataatt 11851471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 593 - 631
Target Start/End: Original strand, 20187027 - 20187065
Alignment:
Q  593 tgtaacaccccgtttcccaaaatcaatttaattataatt 631  Q
    |||||||||||||||||||||||||||| ||| ||||||    
T  20187027 tgtaacaccccgtttcccaaaatcaattaaataataatt 20187065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 593 - 630
Target Start/End: Original strand, 13435099 - 13435136
Alignment:
Q  593 tgtaacaccccgtttcccaaaatcaatttaattataat 630  Q
    |||||||||||||||||||||||||||| ||| |||||    
T  13435099 tgtaacaccccgtttcccaaaatcaattaaataataat 13435136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 591 - 620
Target Start/End: Complemental strand, 14649047 - 14649018
Alignment:
Q  591 attgtaacaccccgtttcccaaaatcaatt 620  Q
    ||||||||||||||||||||||||||||||    
T  14649047 attgtaacaccccgtttcccaaaatcaatt 14649018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 591 - 620
Target Start/End: Complemental strand, 45221562 - 45221533
Alignment:
Q  591 attgtaacaccccgtttcccaaaatcaatt 620  Q
    ||||||||||||||||||||||||||||||    
T  45221562 attgtaacaccccgtttcccaaaatcaatt 45221533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 195 - 247
Target Start/End: Original strand, 5026976 - 5027028
Alignment:
Q  195 cgtctagtcccaaaggaaaagtaccttgagattttaactaaccaagtttttaa 247  Q
    ||||||||||| |||||||||  |||||||||||| ||||||| || ||||||    
T  5026976 cgtctagtccccaaggaaaagccccttgagattttcactaacctagcttttaa 5027028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 593 - 629
Target Start/End: Original strand, 12254522 - 12254558
Alignment:
Q  593 tgtaacaccccgtttcccaaaatcaatttaattataa 629  Q
    |||||||||||||| ||||||||||||||||| ||||    
T  12254522 tgtaacaccccgttacccaaaatcaatttaataataa 12254558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 593 - 645
Target Start/End: Complemental strand, 17199808 - 17199756
Alignment:
Q  593 tgtaacaccccgtttcccaaaatcaatttaattataattataaaatcagagtt 645  Q
    ||||||||||||||||||| |||  | ||||| |||||||||| |||||||||    
T  17199808 tgtaacaccccgtttcccataatacaattaataataattataacatcagagtt 17199756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 195 - 247
Target Start/End: Complemental strand, 39925735 - 39925683
Alignment:
Q  195 cgtctagtcccaaaggaaaagtaccttgagattttaactaaccaagtttttaa 247  Q
    ||||||||||| |||||||||  |||||||||||| ||||||| || ||||||    
T  39925735 cgtctagtccccaaggaaaagccccttgagattttcactaacctagcttttaa 39925683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 56; Significance: 7e-23; HSPs: 16)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 590 - 645
Target Start/End: Original strand, 12571746 - 12571801
Alignment:
Q  590 aattgtaacaccccgtttcccaaaatcaatttaattataattataaaatcagagtt 645  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12571746 aattgtaacaccccgtttcccaaaatcaatttaattataattataaaatcagagtt 12571801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 590 - 645
Target Start/End: Original strand, 12578228 - 12578283
Alignment:
Q  590 aattgtaacaccccgtttcccaaaatcaatttaattataattataaaatcagagtt 645  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12578228 aattgtaacaccccgtttcccaaaatcaatttaattataattataaaatcagagtt 12578283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 592 - 645
Target Start/End: Complemental strand, 27296757 - 27296704
Alignment:
Q  592 ttgtaacaccccgtttcccaaaatcaatttaattataattataaaatcagagtt 645  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  27296757 ttgtaacaccccgtttcccaaaatcaatttaattataattataatatcagagtt 27296704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 590 - 629
Target Start/End: Original strand, 27790343 - 27790382
Alignment:
Q  590 aattgtaacaccccgtttcccaaaatcaatttaattataa 629  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  27790343 aattgtaacaccccgtttcccaaaatcaatttaattataa 27790382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 585 - 630
Target Start/End: Original strand, 26883518 - 26883563
Alignment:
Q  585 gccaaaattgtaacaccccgtttcccaaaatcaatttaattataat 630  Q
    |||||||||||||||||||||||||||||||||||| ||| |||||    
T  26883518 gccaaaattgtaacaccccgtttcccaaaatcaattaaatgataat 26883563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 593 - 629
Target Start/End: Original strand, 27785125 - 27785161
Alignment:
Q  593 tgtaacaccccgtttcccaaaatcaatttaattataa 629  Q
    |||||||||||||||||||||||||||||||||||||    
T  27785125 tgtaacaccccgtttcccaaaatcaatttaattataa 27785161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 590 - 629
Target Start/End: Original strand, 23296908 - 23296947
Alignment:
Q  590 aattgtaacaccccgtttcccaaaatcaatttaattataa 629  Q
    ||||||||||||||||| ||||||||||||||||| ||||    
T  23296908 aattgtaacaccccgttacccaaaatcaatttaataataa 23296947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 556 - 595
Target Start/End: Complemental strand, 31525080 - 31525041
Alignment:
Q  556 tccacaagttctatctcaactgacaaaatgccaaaattgt 595  Q
    ||||||||||||| |||||||||||||||||| |||||||    
T  31525080 tccacaagttctagctcaactgacaaaatgccgaaattgt 31525041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 195 - 319
Target Start/End: Original strand, 20726980 - 20727104
Alignment:
Q  195 cgtctagtcccaaaggaaaagtaccttgagattttaactaaccaagtttttaatacaggatgag-tttaaacctttagaaaaagacgagaactcttcaaa 293  Q
    ||||||||||| |||||||||  |||||||||||| ||||||| || |||||| || |||| || |   |||||||| ||| |  |||| ||||||||||    
T  20726980 cgtctagtccccaaggaaaagccccttgagattttcactaacctagcttttaa-acgggataagctagtaacctttacaaataagcgagcactcttcaaa 20727078  T
Q  294 caaaactatcatttatagaagagtct 319  Q
    |||||| ||| ||| || ||||||||    
T  20727079 caaaacaatcctttgtaaaagagtct 20727104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 592 - 620
Target Start/End: Original strand, 8891 - 8919
Alignment:
Q  592 ttgtaacaccccgtttcccaaaatcaatt 620  Q
    |||||||||||||||||||||||||||||    
T  8891 ttgtaacaccccgtttcccaaaatcaatt 8919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 592 - 620
Target Start/End: Original strand, 8688167 - 8688195
Alignment:
Q  592 ttgtaacaccccgtttcccaaaatcaatt 620  Q
    |||||||||||||||||||||||||||||    
T  8688167 ttgtaacaccccgtttcccaaaatcaatt 8688195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 593 - 629
Target Start/End: Complemental strand, 19792056 - 19792020
Alignment:
Q  593 tgtaacaccccgtttcccaaaatcaatttaattataa 629  Q
    |||||||||||||| ||||||||||||||||| ||||    
T  19792056 tgtaacaccccgttacccaaaatcaatttaataataa 19792020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 593 - 629
Target Start/End: Original strand, 24942795 - 24942831
Alignment:
Q  593 tgtaacaccccgtttcccaaaatcaatttaattataa 629  Q
    |||||||||||||| ||||||||||||||||| ||||    
T  24942795 tgtaacaccccgttacccaaaatcaatttaataataa 24942831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 593 - 629
Target Start/End: Complemental strand, 25036872 - 25036836
Alignment:
Q  593 tgtaacaccccgtttcccaaaatcaatttaattataa 629  Q
    ||||| |||||||||||||||||||||||||| ||||    
T  25036872 tgtaataccccgtttcccaaaatcaatttaataataa 25036836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 593 - 629
Target Start/End: Complemental strand, 25040979 - 25040943
Alignment:
Q  593 tgtaacaccccgtttcccaaaatcaatttaattataa 629  Q
    ||||| |||||||||||||||||||||||||| ||||    
T  25040979 tgtaataccccgtttcccaaaatcaatttaataataa 25040943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 592 - 620
Target Start/End: Original strand, 29280310 - 29280338
Alignment:
Q  592 ttgtaacaccccgtttcccaaaatcaatt 620  Q
    |||||||||||||||||||||||||||||    
T  29280310 ttgtaacaccccgtttcccaaaatcaatt 29280338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1156 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold1156
Description:

Target: scaffold1156; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 592 - 645
Target Start/End: Complemental strand, 58 - 5
Alignment:
Q  592 ttgtaacaccccgtttcccaaaatcaatttaattataattataaaatcagagtt 645  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  58 ttgtaacaccccgtttcccaaaatcaatttaattataattataaaatcagagtt 5  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 54; Significance: 1e-21; HSPs: 18)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 592 - 645
Target Start/End: Complemental strand, 807738 - 807685
Alignment:
Q  592 ttgtaacaccccgtttcccaaaatcaatttaattataattataaaatcagagtt 645  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  807738 ttgtaacaccccgtttcccaaaatcaatttaattataattataaaatcagagtt 807685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 593 - 645
Target Start/End: Complemental strand, 11632679 - 11632627
Alignment:
Q  593 tgtaacaccccgtttcccaaaatcaatttaattataattataaaatcagagtt 645  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11632679 tgtaacaccccgtttcccaaaatcaatttaattataattataaaatcagagtt 11632627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 590 - 645
Target Start/End: Complemental strand, 23202257 - 23202202
Alignment:
Q  590 aattgtaacaccccgtttcccaaaatcaatttaattataattataaaatcagagtt 645  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  23202257 aattgtaacaccccgtttcccaaattcaatttaattataattataaaatcagagtt 23202202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 590 - 645
Target Start/End: Complemental strand, 23508384 - 23508329
Alignment:
Q  590 aattgtaacaccccgtttcccaaaatcaatttaattataattataaaatcagagtt 645  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  23508384 aattgtaacaccccgtttcccaaattcaatttaattataattataaaatcagagtt 23508329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 590 - 645
Target Start/End: Complemental strand, 18049972 - 18049916
Alignment:
Q  590 aattgtaacaccccgtttcccaaaa-tcaatttaattataattataaaatcagagtt 645  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  18049972 aattgtaacaccccgtttcccaaaaatcaatttaattataattataaaatcagagtt 18049916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 593 - 645
Target Start/End: Complemental strand, 20580681 - 20580629
Alignment:
Q  593 tgtaacaccccgtttcccaaaatcaatttaattataattataaaatcagagtt 645  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  20580681 tgtaacaccccgtttcccaaaatcaatttaattataattatagaatcagagtt 20580629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 590 - 645
Target Start/End: Original strand, 23073646 - 23073702
Alignment:
Q  590 aattgtaacaccccgtttcccaaaatcaatttaattat-aattataaaatcagagtt 645  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  23073646 aattgtaacaccccgtttcccaaaatcaatttaattataaattataaaatcagagtt 23073702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 593 - 645
Target Start/End: Complemental strand, 18056449 - 18056396
Alignment:
Q  593 tgtaacaccccgtttcccaaaa-tcaatttaattataattataaaatcagagtt 645  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  18056449 tgtaacaccccgtttcccaaaaatcaatttaattataattataaaatcagagtt 18056396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 590 - 645
Target Start/End: Original strand, 14145889 - 14145944
Alignment:
Q  590 aattgtaacaccccgtttcccaaaatcaatttaattataattataaaatcagagtt 645  Q
    ||||||||||||||||||||||||||||||| ||| |||| ||||| || ||||||    
T  14145889 aattgtaacaccccgtttcccaaaatcaattaaataataaatataacattagagtt 14145944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 587 - 620
Target Start/End: Complemental strand, 10308780 - 10308747
Alignment:
Q  587 caaaattgtaacaccccgtttcccaaaatcaatt 620  Q
    ||||||||||||||||||||||||||||||||||    
T  10308780 caaaattgtaacaccccgtttcccaaaatcaatt 10308747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 593 - 645
Target Start/End: Original strand, 14431404 - 14431456
Alignment:
Q  593 tgtaacaccccgtttcccaaaatcaatttaattataattataaaatcagagtt 645  Q
    |||||||||||||||| ||||||||||| ||| |||| ||||| |||||||||    
T  14431404 tgtaacaccccgtttctcaaaatcaattaaataataaatataacatcagagtt 14431456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 593 - 629
Target Start/End: Complemental strand, 35963517 - 35963481
Alignment:
Q  593 tgtaacaccccgtttcccaaaatcaatttaattataa 629  Q
    |||||||||||||||||||||||||||| ||||||||    
T  35963517 tgtaacaccccgtttcccaaaatcaattaaattataa 35963481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 592 - 631
Target Start/End: Original strand, 15338235 - 15338274
Alignment:
Q  592 ttgtaacaccccgtttcccaaaatcaatttaattataatt 631  Q
    ||||||||||||||||||||||||||||| ||| ||||||    
T  15338235 ttgtaacaccccgtttcccaaaatcaattaaataataatt 15338274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 593 - 630
Target Start/End: Original strand, 1612017 - 1612054
Alignment:
Q  593 tgtaacaccccgtttcccaaaatcaatttaattataat 630  Q
    |||||||||||||||||||||||||||| ||| |||||    
T  1612017 tgtaacaccccgtttcccaaaatcaattaaataataat 1612054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 593 - 630
Target Start/End: Complemental strand, 14321369 - 14321332
Alignment:
Q  593 tgtaacaccccgtttcccaaaatcaatttaattataat 630  Q
    |||||||||||||||||||||||||||| ||| |||||    
T  14321369 tgtaacaccccgtttcccaaaatcaattaaataataat 14321332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 591 - 620
Target Start/End: Original strand, 38827089 - 38827118
Alignment:
Q  591 attgtaacaccccgtttcccaaaatcaatt 620  Q
    ||||||||||||||||||||||||||||||    
T  38827089 attgtaacaccccgtttcccaaaatcaatt 38827118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 592 - 620
Target Start/End: Complemental strand, 11395477 - 11395449
Alignment:
Q  592 ttgtaacaccccgtttcccaaaatcaatt 620  Q
    |||||||||||||||||||||||||||||    
T  11395477 ttgtaacaccccgtttcccaaaatcaatt 11395449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 592 - 620
Target Start/End: Original strand, 16089390 - 16089418
Alignment:
Q  592 ttgtaacaccccgtttcccaaaatcaatt 620  Q
    |||||||||||||||||||||||||||||    
T  16089390 ttgtaacaccccgtttcccaaaatcaatt 16089418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 53; Significance: 4e-21; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 593 - 645
Target Start/End: Complemental strand, 9098 - 9046
Alignment:
Q  593 tgtaacaccccgtttcccaaaatcaatttaattataattataaaatcagagtt 645  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9098 tgtaacaccccgtttcccaaaatcaatttaattataattataaaatcagagtt 9046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 593 - 645
Target Start/End: Complemental strand, 44767 - 44716
Alignment:
Q  593 tgtaacaccccgtttcccaaaatcaatttaattataattataaaatcagagtt 645  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  44767 tgtaacaccccgtttcccaaaatcaatttaattataattat-aaatcagagtt 44716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 53; Significance: 4e-21; HSPs: 2)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 593 - 645
Target Start/End: Complemental strand, 60499 - 60447
Alignment:
Q  593 tgtaacaccccgtttcccaaaatcaatttaattataattataaaatcagagtt 645  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  60499 tgtaacaccccgtttcccaaaatcaatttaattataattataaaatcagagtt 60447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 593 - 629
Target Start/End: Complemental strand, 172586 - 172550
Alignment:
Q  593 tgtaacaccccgtttcccaaaatcaatttaattataa 629  Q
    |||||||||||||| ||||||||||||||||| ||||    
T  172586 tgtaacaccccgttacccaaaatcaatttaataataa 172550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 53; Significance: 4e-21; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 593 - 645
Target Start/End: Original strand, 111362 - 111414
Alignment:
Q  593 tgtaacaccccgtttcccaaaatcaatttaattataattataaaatcagagtt 645  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  111362 tgtaacaccccgtttcccaaaatcaatttaattataattataaaatcagagtt 111414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0596 (Bit Score: 50; Significance: 3e-19; HSPs: 1)
Name: scaffold0596
Description:

Target: scaffold0596; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 592 - 645
Target Start/End: Complemental strand, 292 - 239
Alignment:
Q  592 ttgtaacaccccgtttcccaaaatcaatttaattataattataaaatcagagtt 645  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  292 ttgtaacatcccgtttcccaaaatcaatttaattataattataaaatcagagtt 239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 593 - 645
Target Start/End: Original strand, 29718 - 29770
Alignment:
Q  593 tgtaacaccccgtttcccaaaatcaatttaattataattataaaatcagagtt 645  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  29718 tgtaacaccccgttttccaaaatcaatttaattataattataaaatcagagtt 29770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 593 - 645
Target Start/End: Original strand, 61323 - 61375
Alignment:
Q  593 tgtaacaccccgtttcccaaaatcaatttaattataattataaaatcagagtt 645  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  61323 tgtaacaccccggttcccaaaatcaatttaattataattataaaatcagagtt 61375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 593 - 645
Target Start/End: Original strand, 94338 - 94390
Alignment:
Q  593 tgtaacaccccgtttcccaaaatcaatttaattataattataaaatcagagtt 645  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  94338 tgtaacaccccgtttcctaaaatcaatttaattataattataaaatcagagtt 94390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1914 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold1914
Description:

Target: scaffold1914; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 590 - 645
Target Start/End: Complemental strand, 263 - 208
Alignment:
Q  590 aattgtaacaccccgtttcccaaaatcaatttaattataattataaaatcagagtt 645  Q
    ||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||    
T  263 aattgtaacaccccgttccccaaaatcaatttaattatatttataaaatcagagtt 208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 47; Significance: 2e-17; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 592 - 645
Target Start/End: Complemental strand, 178914 - 178860
Alignment:
Q  592 ttgtaacaccccgtttcccaaaatcaatttaattataattat-aaaatcagagtt 645  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  178914 ttgtaacaccccgtttcccaaaatcaatttaattataattataaaaatcagagtt 178860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 593 - 645
Target Start/End: Original strand, 525473 - 525526
Alignment:
Q  593 tgtaacaccccgtttcccaaaatcaatttaattataattat-aaaatcagagtt 645  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  525473 tgtaacaccccgtttcccaaaatcaatttaattataattataaaaatcagagtt 525526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 593 - 630
Target Start/End: Complemental strand, 494766 - 494729
Alignment:
Q  593 tgtaacaccccgtttcccaaaatcaatttaattataat 630  Q
    |||||||||||||||||||||||||||| ||| |||||    
T  494766 tgtaacaccccgtttcccaaaatcaattaaataataat 494729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 46; Significance: 6e-17; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 593 - 645
Target Start/End: Complemental strand, 271 - 218
Alignment:
Q  593 tgtaacaccccgtttcccaaaatcaatttaattataattat-aaaatcagagtt 645  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  271 tgtaacaccccgtttcccaaaatcaatttaattataattataaaaatcagagtt 218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 46; Significance: 6e-17; HSPs: 8)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 593 - 645
Target Start/End: Original strand, 27279616 - 27279669
Alignment:
Q  593 tgtaacaccccgtttccc-aaaatcaatttaattataattataaaatcagagtt 645  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  27279616 tgtaacaccccgtttccccaaaatcaatttaattataattataaaatcagagtt 27279669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 592 - 629
Target Start/End: Complemental strand, 2341796 - 2341759
Alignment:
Q  592 ttgtaacaccccgtttcccaaaatcaatttaattataa 629  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  2341796 ttgtaacaccccgtttcccaaaatcaatttaataataa 2341759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 195 - 319
Target Start/End: Complemental strand, 21198563 - 21198439
Alignment:
Q  195 cgtctagtcccaaaggaaaagtaccttgagattttaactaaccaagtttttaatacaggatgag-tttaaacctttagaaaaagacgagaactcttcaaa 293  Q
    ||||||||||| |||||||||  |||||||||||| ||||||| || |||||| || |||| || |   |||||||| ||| |  |||| ||||||||||    
T  21198563 cgtctagtccccaaggaaaagccccttgagattttcactaacctagcttttaa-acgggataagctagtaacctttacaaatatgcgagcactcttcaaa 21198465  T
Q  294 caaaactatcatttatagaagagtct 319  Q
    |||||| ||| ||| |||||||||||    
T  21198464 caaaacaatcctttgtagaagagtct 21198439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 590 - 632
Target Start/End: Original strand, 19858558 - 19858600
Alignment:
Q  590 aattgtaacaccccgtttcccaaaatcaatttaattataatta 632  Q
    ||||||||||||||||| ||||||||||||| ||| |||||||    
T  19858558 aattgtaacaccccgttacccaaaatcaattaaataataatta 19858600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 591 - 620
Target Start/End: Original strand, 21704591 - 21704620
Alignment:
Q  591 attgtaacaccccgtttcccaaaatcaatt 620  Q
    ||||||||||||||||||||||||||||||    
T  21704591 attgtaacaccccgtttcccaaaatcaatt 21704620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 592 - 620
Target Start/End: Complemental strand, 20032772 - 20032744
Alignment:
Q  592 ttgtaacaccccgtttcccaaaatcaatt 620  Q
    |||||||||||||||||||||||||||||    
T  20032772 ttgtaacaccccgtttcccaaaatcaatt 20032744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 592 - 620
Target Start/End: Complemental strand, 23067484 - 23067456
Alignment:
Q  592 ttgtaacaccccgtttcccaaaatcaatt 620  Q
    |||||||||||||||||||||||||||||    
T  23067484 ttgtaacaccccgtttcccaaaatcaatt 23067456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 593 - 629
Target Start/End: Complemental strand, 29555218 - 29555182
Alignment:
Q  593 tgtaacaccccgtttcccaaaatcaatttaattataa 629  Q
    |||||||||||||| ||||||||||||||||| ||||    
T  29555218 tgtaacaccccgttacccaaaatcaatttaataataa 29555182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 593 - 645
Target Start/End: Complemental strand, 508 - 456
Alignment:
Q  593 tgtaacaccccgtttcccaaaatcaatttaattataattataaaatcagagtt 645  Q
    ||||||||||||||||||||| |||||||||||||| ||||||||||||||||    
T  508 tgtaacaccccgtttcccaaattcaatttaattatatttataaaatcagagtt 456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1311 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold1311
Description:

Target: scaffold1311; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 593 - 645
Target Start/End: Original strand, 1725 - 1777
Alignment:
Q  593 tgtaacaccccgtttcccaaaatcaatttaattataattataaaatcagagtt 645  Q
    |||||||||||||||||||||||||||||||| |||| ||||| |||||||||    
T  1725 tgtaacaccccgtttcccaaaatcaatttaataataaatataatatcagagtt 1777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 38; Significance: 0.000000000004; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 195 - 319
Target Start/End: Original strand, 113021 - 113145
Alignment:
Q  195 cgtctagtcccaaaggaaaagtaccttgagattttaactaaccaagtttttaatacaggatgag-tttaaacctttagaaaaagacgagaactcttcaaa 293  Q
    ||||||||||| |||||||||| |||||||||||| ||||||| || |||||| || |||| || |   |||||||| ||| |  |||| ||||||||||    
T  113021 cgtctagtccccaaggaaaagtcccttgagattttcactaacctagcttttaa-acgggataagctagtaacctttataaataagcgagcactcttcaaa 113119  T
Q  294 caaaactatcatttatagaagagtct 319  Q
    |||||| ||| ||| |||||||||||    
T  113120 caaaacaatcctttgtagaagagtct 113145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 195 - 247
Target Start/End: Original strand, 353741 - 353793
Alignment:
Q  195 cgtctagtcccaaaggaaaagtaccttgagattttaactaaccaagtttttaa 247  Q
    ||||||||||| |||||||||  |||||||||||| ||||||| || ||||||    
T  353741 cgtctagtccccaaggaaaagccccttgagattttcactaacctagcttttaa 353793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 36; Significance: 0.00000000006; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 590 - 629
Target Start/End: Original strand, 264496 - 264535
Alignment:
Q  590 aattgtaacaccccgtttcccaaaatcaatttaattataa 629  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  264496 aattgtaacaccccgtttcccaaaatcaatttaataataa 264535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 593 - 629
Target Start/End: Original strand, 258134 - 258170
Alignment:
Q  593 tgtaacaccccgtttcccaaaatcaatttaattataa 629  Q
    |||||||||||||||||||||||||||||||| ||||    
T  258134 tgtaacaccccgtttcccaaaatcaatttaataataa 258170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0546 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0546
Description:

Target: scaffold0546; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 592 - 629
Target Start/End: Complemental strand, 10535 - 10498
Alignment:
Q  592 ttgtaacaccccgtttcccaaaatcaatttaattataa 629  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  10535 ttgtaacaccccgtttcccaaaatcaatttaataataa 10498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 592 - 629
Target Start/End: Original strand, 1266 - 1303
Alignment:
Q  592 ttgtaacaccccgtttcccaaaatcaatttaattataa 629  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  1266 ttgtaacaccccgtttcccaaaatcaatttaataataa 1303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 590 - 629
Target Start/End: Original strand, 39076 - 39115
Alignment:
Q  590 aattgtaacaccccgtttcccaaaatcaatttaattataa 629  Q
    ||||||||||||||||| ||||||||||||||||| ||||    
T  39076 aattgtaacaccccgttacccaaaatcaatttaataataa 39115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 590 - 629
Target Start/End: Original strand, 16338 - 16377
Alignment:
Q  590 aattgtaacaccccgtttcccaaaatcaatttaattataa 629  Q
    ||||||||||||||||| ||||||||||||||||| ||||    
T  16338 aattgtaacaccccgttacccaaaatcaatttaataataa 16377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 32; Significance: 0.00000001; HSPs: 3)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 590 - 629
Target Start/End: Complemental strand, 48218 - 48179
Alignment:
Q  590 aattgtaacaccccgtttcccaaaatcaatttaattataa 629  Q
    ||||||||||||||||| ||||||||||||||||| ||||    
T  48218 aattgtaacaccccgttacccaaaatcaatttaataataa 48179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 590 - 629
Target Start/End: Complemental strand, 57252 - 57213
Alignment:
Q  590 aattgtaacaccccgtttcccaaaatcaatttaattataa 629  Q
    ||||||||||||||||| ||||||||||||||||| ||||    
T  57252 aattgtaacaccccgttacccaaaatcaatttaataataa 57213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 590 - 629
Target Start/End: Complemental strand, 63638 - 63599
Alignment:
Q  590 aattgtaacaccccgtttcccaaaatcaatttaattataa 629  Q
    ||||||||||||||||| ||||||||||||||||| ||||    
T  63638 aattgtaacaccccgttacccaaaatcaatttaataataa 63599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 590 - 645
Target Start/End: Complemental strand, 79161 - 79106
Alignment:
Q  590 aattgtaacaccccgtttcccaaaatcaatttaattataattataaaatcagagtt 645  Q
    |||||||||||||||||||||| |||  | ||||| |||||||||| |||||||||    
T  79161 aattgtaacaccccgtttcccataatacaattaataataattataacatcagagtt 79106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 592 - 631
Target Start/End: Original strand, 194501 - 194540
Alignment:
Q  592 ttgtaacaccccgtttcccaaaatcaatttaattataatt 631  Q
    ||||||||||||||||||||||||||||| ||| ||||||    
T  194501 ttgtaacaccccgtttcccaaaatcaattaaataataatt 194540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 591 - 624
Target Start/End: Original strand, 136775 - 136808
Alignment:
Q  591 attgtaacaccccgtttcccaaaatcaatttaat 624  Q
    ||||||||||||||||| ||||||||||||||||    
T  136775 attgtaacaccccgttttccaaaatcaatttaat 136808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0679 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0679
Description:

Target: scaffold0679; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 590 - 620
Target Start/End: Complemental strand, 70 - 40
Alignment:
Q  590 aattgtaacaccccgtttcccaaaatcaatt 620  Q
    |||||||||||||||||||||||||||||||    
T  70 aattgtaacaccccgtttcccaaaatcaatt 40  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0326
Description:

Target: scaffold0326; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 593 - 631
Target Start/End: Complemental strand, 17028 - 16990
Alignment:
Q  593 tgtaacaccccgtttcccaaaatcaatttaattataatt 631  Q
    |||||||||||||||||||||||||||| ||| ||||||    
T  17028 tgtaacaccccgtttcccaaaatcaattaaataataatt 16990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 31; Significance: 0.00000006; HSPs: 2)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 590 - 620
Target Start/End: Complemental strand, 7506 - 7476
Alignment:
Q  590 aattgtaacaccccgtttcccaaaatcaatt 620  Q
    |||||||||||||||||||||||||||||||    
T  7506 aattgtaacaccccgtttcccaaaatcaatt 7476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 590 - 620
Target Start/End: Complemental strand, 17720 - 17690
Alignment:
Q  590 aattgtaacaccccgtttcccaaaatcaatt 620  Q
    |||||||||||||||||||||||||||||||    
T  17720 aattgtaacaccccgtttcccaaaatcaatt 17690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 590 - 620
Target Start/End: Original strand, 26727 - 26757
Alignment:
Q  590 aattgtaacaccccgtttcccaaaatcaatt 620  Q
    |||||||||||||||||||||||||||||||    
T  26727 aattgtaacaccccgtttcccaaaatcaatt 26757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 590 - 620
Target Start/End: Complemental strand, 81245 - 81215
Alignment:
Q  590 aattgtaacaccccgtttcccaaaatcaatt 620  Q
    |||||||||||||||||||||||||||||||    
T  81245 aattgtaacaccccgtttcccaaaatcaatt 81215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 593 - 635
Target Start/End: Complemental strand, 16228 - 16186
Alignment:
Q  593 tgtaacaccccgtttcccaaaatcaatttaattataattataa 635  Q
    |||||||||||||||||||||||||||| ||| ||||| ||||    
T  16228 tgtaacaccccgtttcccaaaatcaattaaataataataataa 16186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0609 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 591 - 620
Target Start/End: Complemental strand, 655 - 626
Alignment:
Q  591 attgtaacaccccgtttcccaaaatcaatt 620  Q
    ||||||||||||||||||||||||||||||    
T  655 attgtaacaccccgtttcccaaaatcaatt 626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 593 - 630
Target Start/End: Original strand, 9755 - 9792
Alignment:
Q  593 tgtaacaccccgtttcccaaaatcaatttaattataat 630  Q
    |||||||||||||||||||||||||||| ||| |||||    
T  9755 tgtaacaccccgtttcccaaaatcaattaaataataat 9792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 593 - 630
Target Start/End: Complemental strand, 6709 - 6672
Alignment:
Q  593 tgtaacaccccgtttcccaaaatcaatttaattataat 630  Q
    |||||||||||||||||||||||||||| ||| |||||    
T  6709 tgtaacaccccgtttcccaaaatcaattaaataataat 6672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 592 - 629
Target Start/End: Original strand, 7568 - 7605
Alignment:
Q  592 ttgtaacaccccgtttcccaaaatcaatttaattataa 629  Q
    |||||||||||||||||||||| |||||||||| ||||    
T  7568 ttgtaacaccccgtttcccaaagtcaatttaataataa 7605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 592 - 629
Target Start/End: Original strand, 37797 - 37834
Alignment:
Q  592 ttgtaacaccccgtttcccaaaatcaatttaattataa 629  Q
    ||||||||||||||| ||||||||||||||||| ||||    
T  37797 ttgtaacaccccgttacccaaaatcaatttaataataa 37834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 195 - 319
Target Start/End: Original strand, 30809 - 30933
Alignment:
Q  195 cgtctagtcccaaaggaaaagtaccttgagattttaactaaccaagtttttaatacaggatgag-tttaaacctttagaaaaagacgagaactcttcaaa 293  Q
    ||||||||||| |||||||||  |||||||||||| ||||||| || |||||| || |||| || |   |||||||| ||| |  |||| ||||||||||    
T  30809 cgtctagtccccaaggaaaagccccttgagattttcactaacctagcttttaa-acgggataagctagtaacctttacaaataagcgagcactcttcaaa 30907  T
Q  294 caaaactatcatttatagaagagtct 319  Q
    |||||| ||| ||| || ||||||||    
T  30908 caaaacaatcctttgtaaaagagtct 30933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 593 - 630
Target Start/End: Original strand, 13407 - 13444
Alignment:
Q  593 tgtaacaccccgtttcccaaaatcaatttaattataat 630  Q
    |||||||||||||||||||||||||||| ||| |||||    
T  13407 tgtaacaccccgtttcccaaaatcaattaaataataat 13444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 593 - 630
Target Start/End: Complemental strand, 21228 - 21191
Alignment:
Q  593 tgtaacaccccgtttcccaaaatcaatttaattataat 630  Q
    |||||||||||||||||||||||||||| ||| |||||    
T  21228 tgtaacaccccgtttcccaaaatcaattaaataataat 21191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 592 - 629
Target Start/End: Original strand, 140728 - 140765
Alignment:
Q  592 ttgtaacaccccgtttcccaaaatcaatttaattataa 629  Q
    |||||||||| |||||||||||||||||||||| ||||    
T  140728 ttgtaacaccacgtttcccaaaatcaatttaataataa 140765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0706 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0706
Description:

Target: scaffold0706; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 593 - 629
Target Start/End: Complemental strand, 4103 - 4067
Alignment:
Q  593 tgtaacaccccgtttcccaaaatcaatttaattataa 629  Q
    |||||||||||||| ||||||||||||||||| ||||    
T  4103 tgtaacaccccgttacccaaaatcaatttaataataa 4067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0303 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0303
Description:

Target: scaffold0303; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 195 - 247
Target Start/End: Complemental strand, 21329 - 21277
Alignment:
Q  195 cgtctagtcccaaaggaaaagtaccttgagattttaactaaccaagtttttaa 247  Q
    ||||||||||| |||||||||  |||||||||||| ||||||| || ||||||    
T  21329 cgtctagtccccaaggaaaagccccttgagattttcactaacctagcttttaa 21277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 592 - 620
Target Start/End: Original strand, 24930 - 24958
Alignment:
Q  592 ttgtaacaccccgtttcccaaaatcaatt 620  Q
    |||||||||||||||||||||||||||||    
T  24930 ttgtaacaccccgtttcccaaaatcaatt 24958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 592 - 620
Target Start/End: Complemental strand, 224 - 196
Alignment:
Q  592 ttgtaacaccccgtttcccaaaatcaatt 620  Q
    |||||||||||||||||||||||||||||    
T  224 ttgtaacaccccgtttcccaaaatcaatt 196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 195 - 247
Target Start/End: Original strand, 89138 - 89190
Alignment:
Q  195 cgtctagtcccaaaggaaaagtaccttgagattttaactaaccaagtttttaa 247  Q
    ||||||||||| |||||||||  |||||||||||| ||||||| || ||||||    
T  89138 cgtctagtccccaaggaaaagccccttgagattttcactaacctagcttttaa 89190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 29; Significance: 0.0000009; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 593 - 629
Target Start/End: Original strand, 151778 - 151814
Alignment:
Q  593 tgtaacaccccgtttcccaaaatcaatttaattataa 629  Q
    ||||||||||||||||||||| |||||||||| ||||    
T  151778 tgtaacaccccgtttcccaaagtcaatttaataataa 151814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 593 - 629
Target Start/End: Original strand, 257898 - 257934
Alignment:
Q  593 tgtaacaccccgtttcccaaaatcaatttaattataa 629  Q
    |||||||||||||| ||||||||||||||||| ||||    
T  257898 tgtaacaccccgttacccaaaatcaatttaataataa 257934  T

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