View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5130-Insertion-8 (Length: 642)

Name: NF5130-Insertion-8
Description: NF5130
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5130-Insertion-8
NF5130-Insertion-8
[»] chr3 (78 HSPs)
chr3 (166-509)||(20498098-20498439)
chr3 (166-509)||(996062-996403)
chr3 (166-485)||(19253715-19254033)
chr3 (166-509)||(10139122-10139464)
chr3 (167-509)||(37820453-37820794)
chr3 (170-485)||(6589455-6589770)
chr3 (166-509)||(3206181-3206514)
chr3 (166-509)||(35337622-35337963)
chr3 (166-485)||(40246732-40247050)
chr3 (166-485)||(33807798-33808120)
chr3 (227-485)||(54625540-54625798)
chr3 (166-485)||(29448858-29449178)
chr3 (216-485)||(44762037-44762306)
chr3 (269-485)||(3999645-3999861)
chr3 (166-485)||(25418254-25418572)
chr3 (161-484)||(52114413-52114734)
chr3 (275-479)||(33996547-33996751)
chr3 (227-470)||(51699495-51699737)
chr3 (277-485)||(53929128-53929336)
chr3 (275-485)||(6035053-6035263)
chr3 (216-478)||(36674137-36674399)
chr3 (170-477)||(29029898-29030203)
chr3 (216-478)||(44906520-44906782)
chr3 (166-450)||(22057651-22057933)
chr3 (216-478)||(11431463-11431725)
chr3 (356-485)||(5825139-5825268)
chr3 (213-431)||(1440006-1440224)
chr3 (269-478)||(17946278-17946487)
chr3 (225-478)||(40897090-40897343)
chr3 (350-478)||(18749683-18749811)
chr3 (350-478)||(32580247-32580375)
chr3 (355-478)||(34484037-34484160)
chr3 (350-485)||(27899415-27899540)
chr3 (216-478)||(50903247-50903512)
chr3 (355-478)||(54628920-54629043)
chr3 (278-478)||(26107260-26107460)
chr3 (397-485)||(6131233-6131321)
chr3 (315-465)||(51737746-51737896)
chr3 (355-478)||(31646293-31646414)
chr3 (350-478)||(48379228-48379356)
chr3 (270-478)||(52617978-52618180)
chr3 (350-478)||(52810449-52810577)
chr3 (374-485)||(1439894-1440005)
chr3 (216-419)||(10660472-10660675)
chr3 (315-474)||(20833028-20833187)
chr3 (216-408)||(23753463-23753655)
chr3 (221-475)||(44276331-44276571)
chr3 (269-478)||(10728658-10728857)
chr3 (351-485)||(52079999-52080117)
chr3 (359-453)||(55235264-55235359)
chr3 (268-478)||(37454850-37455050)
chr3 (269-478)||(39038030-39038229)
chr3 (350-478)||(39842501-39842619)
chr3 (350-478)||(50762067-50762185)
chr3 (350-467)||(6975817-6975924)
chr3 (315-413)||(539476-539574)
chr3 (432-485)||(33807680-33807733)
chr3 (166-249)||(12734076-12734158)
chr3 (421-478)||(45862983-45863040)
chr3 (213-257)||(6131440-6131484)
chr3 (410-478)||(15492874-15492942)
chr3 (350-406)||(23535890-23535946)
chr3 (422-477)||(12103733-12103789)
chr3 (216-251)||(10728833-10728868)
chr3 (165-204)||(33996771-33996810)
chr3 (163-202)||(52079878-52079917)
chr3 (221-251)||(6975733-6975763)
chr3 (166-204)||(16010751-16010789)
chr3 (221-251)||(18749554-18749584)
chr3 (221-251)||(27240435-27240465)
chr3 (221-251)||(34484222-34484252)
chr3 (221-251)||(50762242-50762272)
chr3 (221-251)||(51737919-51737949)
chr3 (221-251)||(54628827-54628857)
chr3 (221-250)||(3999796-3999825)
chr3 (221-250)||(33996692-33996721)
chr3 (221-250)||(53929279-53929308)
chr3 (213-258)||(53929345-53929390)
[»] chr7 (68 HSPs)
chr7 (167-509)||(973074-973416)
chr7 (166-509)||(40996624-40996967)
chr7 (166-509)||(18914710-18915052)
chr7 (166-509)||(30440686-30441028)
chr7 (167-484)||(43581090-43581406)
chr7 (166-485)||(44343395-44343713)
chr7 (166-485)||(12893298-12893616)
chr7 (167-509)||(47914157-47914498)
chr7 (221-509)||(34695217-34695505)
chr7 (167-509)||(47879059-47879400)
chr7 (169-509)||(20275238-20275577)
chr7 (213-485)||(7719259-7719532)
chr7 (168-485)||(32142916-32143235)
chr7 (166-509)||(34008905-34009245)
chr7 (308-485)||(7718361-7718538)
chr7 (178-485)||(7113358-7113660)
chr7 (308-509)||(39219352-39219552)
chr7 (216-485)||(10068398-10068668)
chr7 (216-478)||(23101230-23101492)
chr7 (216-478)||(29614770-29615032)
chr7 (216-478)||(28342279-28342541)
chr7 (216-478)||(39784031-39784293)
chr7 (216-478)||(9882243-9882504)
chr7 (167-417)||(31638766-31639015)
chr7 (221-457)||(12963638-12963874)
chr7 (354-455)||(43679491-43679592)
chr7 (169-466)||(727405-727692)
chr7 (269-478)||(3022911-3023120)
chr7 (216-475)||(33382569-33382828)
chr7 (224-478)||(18838329-18838583)
chr7 (216-478)||(7993074-7993336)
chr7 (277-478)||(8675326-8675527)
chr7 (269-485)||(12740358-12740573)
chr7 (350-478)||(28034811-28034939)
chr7 (356-475)||(43187366-43187485)
chr7 (221-478)||(19251476-19251723)
chr7 (275-485)||(9179871-9180071)
chr7 (231-485)||(3797066-3797310)
chr7 (355-454)||(25805763-25805862)
chr7 (370-478)||(37972873-37972981)
chr7 (309-475)||(44256775-44256941)
chr7 (359-478)||(19810874-19810983)
chr7 (216-419)||(37327859-37328062)
chr7 (216-478)||(40460723-40460975)
chr7 (370-478)||(41827390-41827498)
chr7 (268-475)||(44121919-44122116)
chr7 (166-300)||(8078285-8078418)
chr7 (308-441)||(10676463-10676596)
chr7 (350-450)||(32883848-32883948)
chr7 (350-478)||(509722-509840)
chr7 (165-258)||(43679358-43679451)
chr7 (216-421)||(46405494-46405699)
chr7 (216-408)||(17001099-17001291)
chr7 (216-419)||(39028029-39028232)
chr7 (355-466)||(1470252-1470362)
chr7 (266-478)||(29585497-29585698)
chr7 (275-475)||(33892269-33892459)
chr7 (166-258)||(34695121-34695212)
chr7 (390-468)||(10617024-10617102)
chr7 (167-258)||(39219561-39219651)
chr7 (268-475)||(44623295-44623492)
chr7 (350-408)||(47066770-47066828)
chr7 (355-414)||(447854-447913)
chr7 (216-251)||(29893055-29893090)
chr7 (221-251)||(48117784-48117814)
chr7 (221-250)||(7718512-7718541)
chr7 (446-478)||(17001049-17001081)
chr7 (223-251)||(43187576-43187604)
[»] chr6 (22 HSPs)
chr6 (166-509)||(6197453-6197795)
chr6 (166-484)||(2300738-2301055)
chr6 (167-485)||(1391513-1391830)
chr6 (166-485)||(29076485-29076805)
chr6 (166-485)||(29111458-29111779)
chr6 (216-509)||(28002602-28002895)
chr6 (216-478)||(31895633-31895895)
chr6 (166-479)||(7051733-7052045)
chr6 (216-478)||(34773346-34773608)
chr6 (216-478)||(14262439-14262701)
chr6 (308-478)||(7497105-7497274)
chr6 (316-478)||(34759056-34759218)
chr6 (355-478)||(31067569-31067682)
chr6 (350-478)||(30385075-30385191)
chr6 (370-478)||(4200443-4200541)
chr6 (270-450)||(656957-657122)
chr6 (436-485)||(2238668-2238717)
chr6 (355-399)||(3848286-3848330)
chr6 (444-484)||(11113733-11113773)
chr6 (221-251)||(30385248-30385278)
chr6 (221-251)||(34759242-34759272)
chr6 (221-250)||(656991-657020)
[»] chr5 (35 HSPs)
chr5 (166-485)||(21146956-21147274)
chr5 (167-485)||(33656040-33656359)
chr5 (167-509)||(27458925-27459265)
chr5 (216-479)||(139211-139474)
chr5 (269-479)||(5272924-5273134)
chr5 (316-509)||(7016714-7016907)
chr5 (178-509)||(32157869-32158204)
chr5 (167-451)||(6460682-6460965)
chr5 (308-465)||(849177-849334)
chr5 (216-478)||(13925869-13926131)
chr5 (216-478)||(14000111-14000373)
chr5 (216-475)||(4550266-4550525)
chr5 (269-485)||(1152102-1152318)
chr5 (350-478)||(39852417-39852545)
chr5 (359-478)||(7947579-7947698)
chr5 (314-485)||(9689694-9689864)
chr5 (213-445)||(14465266-14465497)
chr5 (216-478)||(4240468-4240720)
chr5 (227-478)||(5949058-5949298)
chr5 (216-485)||(22746235-22746496)
chr5 (216-478)||(40013718-40013970)
chr5 (216-408)||(37013852-37014044)
chr5 (359-419)||(1461203-1461263)
chr5 (166-258)||(7016923-7017014)
chr5 (166-249)||(43319135-43319218)
chr5 (275-485)||(9220716-9220916)
chr5 (169-331)||(5273114-5273276)
chr5 (30-83)||(39546072-39546125)
chr5 (169-255)||(9689553-9689637)
chr5 (213-250)||(849166-849203)
chr5 (221-251)||(1152294-1152324)
chr5 (221-251)||(5949094-5949124)
chr5 (221-250)||(16894052-16894081)
chr5 (168-258)||(16894086-16894174)
chr5 (223-251)||(1461329-1461357)
[»] chr2 (38 HSPs)
chr2 (165-509)||(16269580-16269923)
chr2 (166-485)||(24776245-24776563)
chr2 (166-509)||(31170602-31170944)
chr2 (168-509)||(14198555-14198894)
chr2 (221-509)||(20605180-20605468)
chr2 (165-509)||(35316951-35317294)
chr2 (166-509)||(12407270-12407612)
chr2 (167-509)||(22551741-22552082)
chr2 (166-509)||(305443-305787)
chr2 (166-465)||(1789332-1789630)
chr2 (166-509)||(43847536-43847878)
chr2 (225-485)||(5093049-5093309)
chr2 (178-479)||(32125152-32125455)
chr2 (163-485)||(44765662-44765974)
chr2 (308-509)||(9120157-9120358)
chr2 (216-478)||(28844494-28844756)
chr2 (216-478)||(33135562-33135823)
chr2 (269-478)||(10657398-10657607)
chr2 (216-460)||(26788723-26788969)
chr2 (355-478)||(18177345-18177468)
chr2 (355-478)||(25288237-25288360)
chr2 (216-478)||(28740302-28740554)
chr2 (221-419)||(7026548-7026746)
chr2 (166-329)||(20605042-20605204)
chr2 (166-417)||(26601270-26601520)
chr2 (367-478)||(43078653-43078764)
chr2 (216-485)||(10125302-10125563)
chr2 (356-478)||(13833441-13833553)
chr2 (350-478)||(3463745-3463863)
chr2 (216-408)||(3574786-3574978)
chr2 (166-292)||(9120058-9120183)
chr2 (356-419)||(379016-379079)
chr2 (216-392)||(215320-215496)
chr2 (350-408)||(6224626-6224684)
chr2 (421-478)||(6224576-6224633)
chr2 (350-399)||(21370638-21370687)
chr2 (421-476)||(215249-215303)
chr2 (171-204)||(5093319-5093352)
[»] chr4 (71 HSPs)
chr4 (166-485)||(41881082-41881402)
chr4 (166-509)||(25331019-25331361)
chr4 (166-479)||(1044698-1045007)
chr4 (166-479)||(22201903-22202215)
chr4 (177-484)||(32950837-32951143)
chr4 (166-509)||(30009653-30009995)
chr4 (213-509)||(34228559-34228854)
chr4 (168-485)||(1112784-1113099)
chr4 (216-485)||(55302780-55303049)
chr4 (167-455)||(28541587-28541874)
chr4 (167-485)||(37046450-37046769)
chr4 (166-508)||(39479332-39479675)
chr4 (167-509)||(24130957-24131289)
chr4 (216-485)||(7007310-7007580)
chr4 (213-464)||(19740929-19741180)
chr4 (269-478)||(12112935-12113144)
chr4 (168-485)||(46635648-46635959)
chr4 (169-508)||(31314719-31315043)
chr4 (308-485)||(42786713-42786890)
chr4 (350-507)||(41320881-41321038)
chr4 (221-509)||(3436535-3436823)
chr4 (216-478)||(5441341-5441603)
chr4 (216-478)||(27767993-27768255)
chr4 (216-478)||(54341081-54341343)
chr4 (167-455)||(7249795-7250090)
chr4 (216-478)||(37828409-37828671)
chr4 (309-456)||(25446080-25446227)
chr4 (213-441)||(23464889-23465117)
chr4 (213-428)||(25504696-25504911)
chr4 (166-484)||(40537161-40537463)
chr4 (269-465)||(53275829-53276025)
chr4 (227-478)||(51320869-51321120)
chr4 (269-485)||(9163066-9163274)
chr4 (221-478)||(54853475-54853732)
chr4 (353-485)||(27454078-27454210)
chr4 (350-478)||(48261198-48261326)
chr4 (315-478)||(32322127-32322290)
chr4 (356-476)||(44770862-44770982)
chr4 (315-475)||(37915863-37916023)
chr4 (216-478)||(30967316-30967568)
chr4 (266-479)||(39307259-39307472)
chr4 (269-478)||(23987204-23987403)
chr4 (269-478)||(36479249-36479447)
chr4 (221-478)||(12913165-12913413)
chr4 (391-478)||(8711978-8712065)
chr4 (356-478)||(56445362-56445474)
chr4 (391-485)||(24736447-24736541)
chr4 (216-421)||(29649731-29649936)
chr4 (350-478)||(41725196-41725321)
chr4 (356-441)||(28371001-28371086)
chr4 (216-408)||(49834890-49835082)
chr4 (410-485)||(11090435-11090510)
chr4 (315-484)||(28483935-28484093)
chr4 (166-250)||(42786655-42786739)
chr4 (350-479)||(41581795-41581923)
chr4 (221-475)||(50018193-50018437)
chr4 (370-476)||(20021424-20021531)
chr4 (350-475)||(5800049-5800164)
chr4 (350-408)||(32684065-32684123)
chr4 (315-478)||(49501526-49501681)
chr4 (315-478)||(49507591-49507746)
chr4 (216-300)||(20021281-20021365)
chr4 (166-300)||(41320638-41320769)
chr4 (411-475)||(36727960-36728023)
chr4 (222-258)||(49469264-49469300)
chr4 (221-251)||(9163060-9163090)
chr4 (429-475)||(32684018-32684064)
chr4 (221-251)||(41320804-41320834)
chr4 (444-477)||(55047641-55047674)
chr4 (385-477)||(12193135-12193227)
chr4 (221-249)||(37915811-37915839)
[»] chr1 (57 HSPs)
chr1 (165-479)||(35279553-35279866)
chr1 (221-509)||(19451784-19452072)
chr1 (166-509)||(21222030-21222371)
chr1 (166-509)||(45759985-45760328)
chr1 (169-509)||(47654327-47654669)
chr1 (163-509)||(49198245-49198588)
chr1 (166-509)||(28824349-28824690)
chr1 (166-509)||(50192526-50192869)
chr1 (166-485)||(6304252-6304572)
chr1 (166-450)||(730031-730314)
chr1 (167-485)||(35679128-35679445)
chr1 (166-479)||(49417966-49418278)
chr1 (227-466)||(45535886-45536125)
chr1 (221-509)||(47780646-47780935)
chr1 (216-478)||(6312505-6312767)
chr1 (221-485)||(29556040-29556305)
chr1 (355-479)||(31572203-31572327)
chr1 (216-478)||(25612088-25612350)
chr1 (216-478)||(29396395-29396657)
chr1 (216-478)||(48177469-48177731)
chr1 (221-475)||(51701516-51701770)
chr1 (350-475)||(32588963-32589088)
chr1 (172-456)||(48524208-48524490)
chr1 (166-485)||(33025394-33025703)
chr1 (350-478)||(9577439-9577567)
chr1 (216-478)||(15835060-15835322)
chr1 (269-485)||(37014640-37014856)
chr1 (216-477)||(46327973-46328234)
chr1 (216-478)||(9322507-9322769)
chr1 (216-478)||(28387400-28387662)
chr1 (166-372)||(22183252-22183457)
chr1 (166-342)||(953701-953876)
chr1 (224-408)||(18798430-18798614)
chr1 (216-478)||(29219219-29219469)
chr1 (350-478)||(38536106-38536224)
chr1 (350-478)||(38558324-38558442)
chr1 (216-474)||(5495117-5495365)
chr1 (216-399)||(49230817-49231000)
chr1 (358-417)||(955823-955882)
chr1 (355-475)||(48668795-48668905)
chr1 (166-258)||(19452077-19452168)
chr1 (350-441)||(51085860-51085951)
chr1 (213-300)||(14494137-14494224)
chr1 (167-258)||(47780502-47780592)
chr1 (216-342)||(8141271-8141397)
chr1 (375-477)||(38319996-38320098)
chr1 (358-408)||(31622536-31622586)
chr1 (350-451)||(47784451-47784542)
chr1 (275-475)||(45272577-45272765)
chr1 (429-477)||(18798615-18798663)
chr1 (448-508)||(48524805-48524865)
chr1 (221-251)||(18798469-18798499)
chr1 (166-204)||(28541386-28541424)
chr1 (221-251)||(38536281-38536311)
chr1 (221-251)||(38558499-38558529)
chr1 (221-251)||(47784407-47784437)
chr1 (421-449)||(955876-955904)
[»] chr8 (45 HSPs)
chr8 (170-485)||(26374429-26374741)
chr8 (166-509)||(2704794-2705136)
chr8 (166-509)||(42735252-42735594)
chr8 (167-509)||(7506874-7507215)
chr8 (166-485)||(23115168-23115485)
chr8 (215-485)||(42938116-42938386)
chr8 (166-509)||(5576595-5576938)
chr8 (6-165)||(43399869-43400028)
chr8 (269-509)||(24501788-24502028)
chr8 (169-509)||(41478989-41479318)
chr8 (169-509)||(43959549-43959878)
chr8 (167-509)||(42937250-42937582)
chr8 (272-484)||(10392237-10392449)
chr8 (216-478)||(14782141-14782403)
chr8 (216-478)||(44725816-44726078)
chr8 (166-473)||(32711305-32711599)
chr8 (216-475)||(18958736-18958995)
chr8 (269-478)||(9288463-9288672)
chr8 (216-478)||(19717887-19718149)
chr8 (216-478)||(10295386-10295649)
chr8 (355-478)||(4403184-4403307)
chr8 (216-475)||(39467477-39467735)
chr8 (350-478)||(43166696-43166824)
chr8 (216-478)||(26856004-26856267)
chr8 (216-478)||(18305977-18306229)
chr8 (357-479)||(4950021-4950143)
chr8 (216-478)||(7466273-7466525)
chr8 (221-478)||(32497468-32497715)
chr8 (358-478)||(39189822-39189940)
chr8 (358-465)||(13478269-13478376)
chr8 (269-419)||(16362187-16362337)
chr8 (356-464)||(8410416-8410526)
chr8 (216-408)||(4031334-4031526)
chr8 (216-478)||(42305801-42306053)
chr8 (275-408)||(31623692-31623825)
chr8 (315-478)||(37857156-37857309)
chr8 (166-329)||(8543408-8543574)
chr8 (177-255)||(26373705-26373782)
chr8 (165-258)||(24214817-24214909)
chr8 (421-485)||(9770439-9770503)
chr8 (166-251)||(24502004-24502088)
chr8 (221-300)||(43166832-43166911)
chr8 (213-247)||(32497418-32497452)
chr8 (221-250)||(24501963-24501992)
chr8 (227-300)||(39189955-39190028)
[»] scaffold0400 (1 HSPs)
scaffold0400 (213-509)||(15009-15305)
[»] scaffold0365 (1 HSPs)
scaffold0365 (213-509)||(15652-15948)
[»] scaffold0037 (1 HSPs)
scaffold0037 (166-479)||(100100-100412)
[»] scaffold0004 (2 HSPs)
scaffold0004 (266-485)||(102081-102302)
scaffold0004 (167-204)||(102026-102063)
[»] scaffold0151 (2 HSPs)
scaffold0151 (308-509)||(38581-38781)
scaffold0151 (167-250)||(38755-38837)
[»] scaffold0276 (1 HSPs)
scaffold0276 (221-484)||(540-803)
[»] scaffold0113 (2 HSPs)
scaffold0113 (269-485)||(38895-39111)
scaffold0113 (166-251)||(39087-39171)
[»] scaffold0110 (1 HSPs)
scaffold0110 (216-478)||(39624-39886)
[»] scaffold0543 (1 HSPs)
scaffold0543 (216-478)||(10498-10760)
[»] scaffold0054 (1 HSPs)
scaffold0054 (357-478)||(36914-37035)
[»] scaffold1504 (2 HSPs)
scaffold1504 (350-478)||(936-1063)
scaffold1504 (221-251)||(848-878)
[»] scaffold0042 (1 HSPs)
scaffold0042 (355-478)||(58083-58206)
[»] scaffold0922 (1 HSPs)
scaffold0922 (221-415)||(4143-4337)
[»] scaffold0306 (2 HSPs)
scaffold0306 (269-478)||(13873-14072)
scaffold0306 (216-251)||(13862-13897)
[»] scaffold0152 (4 HSPs)
scaffold0152 (269-419)||(21304-21454)
scaffold0152 (216-251)||(21430-21465)
scaffold0152 (446-478)||(21255-21287)
scaffold0152 (446-478)||(28510-28542)
[»] scaffold0347 (1 HSPs)
scaffold0347 (410-485)||(14892-14967)
[»] scaffold0839 (1 HSPs)
scaffold0839 (379-465)||(3712-3798)
[»] scaffold0651 (1 HSPs)
scaffold0651 (169-300)||(8654-8784)
[»] scaffold0007 (1 HSPs)
scaffold0007 (358-451)||(199905-199998)
[»] scaffold0010 (2 HSPs)
scaffold0010 (221-251)||(233722-233752)
scaffold0010 (221-251)||(234570-234600)


Alignment Details
Target: chr3 (Bit Score: 203; Significance: 1e-110; HSPs: 78)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 203; E-Value: 1e-110
Query Start/End: Original strand, 166 - 509
Target Start/End: Original strand, 20498098 - 20498439
Alignment:
Q  166 ggggtgtatttgatcatgattctaagggattttaaaagannnnnnnnatcatgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnn 265  Q
    |||||||||| ||||||||||||||||||||||||||||        ||||||| ||||||||||||||||||||||||||||||||||||||           
T  20498098 ggggtgtattggatcatgattctaagggattttaaaagacttttt--atcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaa 20498195  T
Q  266 gttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaa 365  Q
    |||||||||||||||||||| ||||||||||||||       ||||| |||||||||||||||| | ||||||||||       ||||||||||||||||    
T  20498196 gttttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaa 20498295  T
Q  366 aatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 465  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20498296 aatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 20498395  T
Q  466 catgagatttcttatgattgnnnnnnncttttaagattttacta 509  Q
    |||||||||||||| |||||       |||||||||||||||||    
T  20498396 catgagatttcttaggattgtttttttcttttaagattttacta 20498439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 166 - 509
Target Start/End: Complemental strand, 996403 - 996062
Alignment:
Q  166 ggggtgtatttgatcatgattctaagggattttaaaagannnnnnnnatcatgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnn 265  Q
    |||||||||| ||||||||||||||||||||||||||||        ||||||| |||||||||||||||||||||||||||||||||||||            
T  996403 ggggtgtattggatcatgattctaagggattttaaaagactttttt-atcatgaaaaagtcttgtggtattcaatcaagactctttccaatt-aaaaaaa 996306  T
Q  266 gttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaa 365  Q
    || ||||||||||||||||| ||||||| ||||||       ||||| |||||||||||||||||| ||||||||||       ||||||||||||||||    
T  996305 gtcttgtgttattcaatcaagattctttatcatttcaaaaaagtcttgtggtattcaatcaagattcttaatcacttaaaaaaagtctagtggtattcaa 996206  T
Q  366 aatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 465  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  996205 aatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 996106  T
Q  466 catgagatttcttatgattgnnnnnnncttttaagattttacta 509  Q
    |||||||||||||| |||||       |||||||||||||||||    
T  996105 catgagatttcttaggattgtttttttcttttaagattttacta 996062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 166 - 485
Target Start/End: Original strand, 19253715 - 19254033
Alignment:
Q  166 ggggtgtatttgatcatgattctaagggattttaaaagannnnnnnnatcatgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnn 265  Q
    ||||| |||| ||||||||||||||||||||||||||||        ||||||| ||||||||||||||||||||||||||||||||||||||           
T  19253715 ggggtttattggatcatgattctaagggattttaaaagactttttt-atcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaa 19253813  T
Q  266 gttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaa 365  Q
    || ||||||||||||||||| ||||||||||||||       ||||| |||||||||||||||| | ||||||||||       ||||||||||||||||    
T  19253814 gtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaa 19253913  T
Q  366 aatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 465  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19253914 aatcattcaaatttcgaaggattgtttaataaataagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 19254013  T
Q  466 catgagatttcttatgattg 485  Q
    |||||||||||||| |||||    
T  19254014 catgagatttcttaggattg 19254033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 183; E-Value: 1e-98
Query Start/End: Original strand, 166 - 509
Target Start/End: Complemental strand, 10139464 - 10139122
Alignment:
Q  166 ggggtgtatttgatcatgattctaagggattttaaaagannnnnnnnatcatgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnn 265  Q
    ||||||||||  ||||||||||||||||||||||||| |        ||||||| ||||||||||||||||||||||||||||||||||||||           
T  10139464 ggggtgtattgaatcatgattctaagggattttaaaatactttttt-atcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaa 10139366  T
Q  266 gttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaa 365  Q
    || ||||||||||||||||| |||| || ||||||       ||||| |||||||||||||||| | ||||||||||       ||||||||||||||||    
T  10139365 gtcttgtgttattcaatcaagattccttatcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaa 10139266  T
Q  366 aatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 465  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10139265 aatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 10139166  T
Q  466 catgagatttcttatgattgnnnnnnncttttaagattttacta 509  Q
    |||||||||||||| |||||       |||||||||||||||||    
T  10139165 catgagatttcttaggattgtttttttcttttaagattttacta 10139122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 182; E-Value: 4e-98
Query Start/End: Original strand, 167 - 509
Target Start/End: Complemental strand, 37820794 - 37820453
Alignment:
Q  167 gggtgtatttgatcatgattctaagggattttaaaagannnnnnnnatcatgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnng 266  Q
    |||| |||| ||| ||||||||||||||||||||||||        ||||||| ||||||||||||||||||||||||||||||||||||||       |    
T  37820794 gggtatattggataatgattctaagggattttaaaagactttttt-atcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaag 37820696  T
Q  267 ttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaa 366  Q
    | ||||||||||||||||| ||||||||||||||        |||| |||||||||||||||||| ||||||||||       |||||||||||||||||    
T  37820695 tcttgtgttattcaatcaagattctttgtcatttaaaaaaattcttgtggtattcaatcaagattcttaatcacttaaaaaaagtctagtggtattcaaa 37820596  T
Q  367 atcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaac 466  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  37820595 atcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttccagtgaaattttagcatgaaaaagtctttcataaaaac 37820496  T
Q  467 atgagatttcttatgattgnnnnnnncttttaagattttacta 509  Q
    ||||||||||||| |||||       |||||||||||||||||    
T  37820495 atgagatttcttaagattgtttttttcttttaagattttacta 37820453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 169; E-Value: 3e-90
Query Start/End: Original strand, 170 - 485
Target Start/End: Original strand, 6589455 - 6589770
Alignment:
Q  170 tgtatttgatcatgattctaagggattttaaaagannnnnnnnatcatgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnngttt 269  Q
    |||||| |||||||||||||||||| |||||||||        ||||||| |||||||||||||||||||| ||||||||||| |||||       || |    
T  6589455 tgtattggatcatgattctaagggactttaaaagactttttttatcatgaaaaagtcttgtggtattcaattaagactctttctaatttaaaaaaagtct 6589554  T
Q  270 tgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatc 369  Q
    |||||||||||||||| |||| |||||||||       ||||| |||||||||||||||| | ||||||| ||       ||||||||||||||||||||    
T  6589555 tgtgttattcaatcaatattccttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcatttaaaaaaagtctagtggtattcaaaatc 6589654  T
Q  370 attcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatg 469  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6589655 attcaaatttcgaagaattatttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatg 6589754  T
Q  470 agatttcttatgattg 485  Q
    |||||||||| |||||    
T  6589755 agatttcttaggattg 6589770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 165; E-Value: 6e-88
Query Start/End: Original strand, 166 - 509
Target Start/End: Complemental strand, 3206514 - 3206181
Alignment:
Q  166 ggggtgtatttgatcatgattctaagggattttaaaagannnnnnnnatcatgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnn 265  Q
    |||||||||| ||||||||||||||||||||||||||||        ||||||| ||||||||||||||||||||||||||||||| ||||||           
T  3206514 ggggtgtattggatcatgattctaagggattttaaaagactttttt-atcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttaaaaaaa 3206416  T
Q  266 gttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaa 365  Q
    || ||||| ||||||||||| |||||||   |          ||||| |||||||||||||||| | ||||||||||       ||||||||||||||||    
T  3206415 gtcttgtggtattcaatcaagattctttaaaa---------agtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaa 3206325  T
Q  366 aatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 465  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  3206324 aatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcaagaaaaagtctttcatgaaaa 3206225  T
Q  466 catgagatttcttatgattgnnnnnnncttttaagattttacta 509  Q
    ||||||||||||||||||||       |||||||||||||||||    
T  3206224 catgagatttcttatgattgtttttttcttttaagattttacta 3206181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 166 - 509
Target Start/End: Original strand, 35337622 - 35337963
Alignment:
Q  166 ggggtgtatttga-tcatgattctaagggattttaaaagannnnnnnnatcatgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnn 264  Q
    ||||||||||||| ||||||||||||||||||||||||||        || |||| ||||||||||||||||||||||||||||||||||||||          
T  35337622 ggggtgtatttgaatcatgattctaagggattttaaaagactttttt-attatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaa 35337720  T
Q  265 ngttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattca 364  Q
     || ||||||||||||||||| |||| |||||||||       ||||| |||||||||||||||| | ||||||||||       |||||||||||||||    
T  35337721 agtcttgtgttattcaatcaagattccttgtcattttaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattca 35337820  T
Q  365 aaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaa 464  Q
    |||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  35337821 aaaaaattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagt-tttcatgaaa 35337919  T
Q  465 acatgagatttcttatgattgnnnnnnncttttaagattttacta 509  Q
    ||||||||||| ||| |||||       |||||||||||||||||    
T  35337920 acatgagattt-ttaggattgtttttttcttttaagattttacta 35337963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 157; E-Value: 4e-83
Query Start/End: Original strand, 166 - 485
Target Start/End: Original strand, 40246732 - 40247050
Alignment:
Q  166 ggggtgtatttgatcatgattctaagggattttaaaagannnnnnnnatcatgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnn 265  Q
    |||||||||| ||||||||||||||| |||||||||| |        ||| ||| ||||||||||||||||||||||||||||||||   |||           
T  40246732 ggggtgtattggatcatgattctaagagattttaaaa-aacttttttatcgtgaaaaagtcttgtggtattcaatcaagactctttctggtttaaaaaaa 40246830  T
Q  266 gttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaa 365  Q
     | ||||||||||||||||| ||||||||||||||       || || |||||||||||||||| ||||||||| ||       ||||||||||||||||    
T  40246831 atcttgtgttattcaatcaagattctttgtcatttaaaaaaagttttgtggtattcaatcaagactattaatcagttaaaaaaagtctagtggtattcaa 40246930  T
Q  366 aatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 465  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  40246931 aatcattcaaatttggaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttggcatgaaaaagtctttcatgaaaa 40247030  T
Q  466 catgagatttcttatgattg 485  Q
    ||||||||| ||||||||||    
T  40247031 catgagattccttatgattg 40247050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 166 - 485
Target Start/End: Complemental strand, 33808120 - 33807798
Alignment:
Q  166 ggggtgtatttgatcatgattctaagggattttaaaagannnnnnnnatcatgataaagtcttgtggt---attcaatcaagactctttccaatttnnnn 262  Q
    ||||||||||  |||||||||||||||||||||||||||        ||||| | |||||||||||||   |||||||||| | ||||| ||||||        
T  33808120 ggggtgtattgaatcatgattctaagggattttaaaagactttttt-atcataaaaaagtcttgtggtggtattcaatcaaaattcttttcaatttaaaa 33808022  T
Q  263 nnngttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnn-gtctagtggtat 361  Q
       || |||||||||||||| || ||||||||||||||       ||||| |||||||||||||||| | ||||||||||        ||||||||||||    
T  33808021 aaagtcttgtgttattcaattaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaagtctagtggtat 33807922  T
Q  362 tcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatg 461  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33807921 tcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatg 33807822  T
Q  462 aaaacatgagatttcttatgattg 485  Q
    |||||||||||||||||| |||||    
T  33807821 aaaacatgagatttcttaggattg 33807798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 148; E-Value: 9e-78
Query Start/End: Original strand, 227 - 485
Target Start/End: Original strand, 54625540 - 54625798
Alignment:
Q  227 ttgtggtattcaatcaagactctttccaatttnnnnnnngttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatca 326  Q
    |||| |||||||||||||||||||||||||||       || ||||||||||||||||| |||| |||||||||        |||| | |||||||||||    
T  54625540 ttgtagtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaatattcgttgtcatttaaaaaaaatcttgttgtattcaatca 54625639  T
Q  327 agattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattt 426  Q
    ||| | ||||||||||       ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54625640 agactcttaatcacttaaaaaaagtctagtggtattcaaaattattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattt 54625739  T
Q  427 tctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttatgattg 485  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||    
T  54625740 tctagtgaaattttagcatgaaaaagtttttcatgaaaacatgagatttcttaagattg 54625798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 166 - 485
Target Start/End: Complemental strand, 29449178 - 29448858
Alignment:
Q  166 ggggtgtatttgatcatgattctaagggattttaaaagannnnnnnnatcatgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnn 265  Q
    |||||||||| |||||||||| |||||||||||||||||        || |||| ||| ||||||||||||||||||| ||||||||||| ||           
T  29449178 ggggtgtattagatcatgattataagggattttaaaagactttttt-attatgaaaaaatcttgtggtattcaatcaatactctttccaaatttaaaaaa 29449080  T
Q  266 --gttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattc 363  Q
      || ||||||||||||||||| |||| |||||||||       ||||| || ||||||||||||| | | ||||||||       ||||||||||||||    
T  29449079 aagtcttgtgttattcaatcaagattccttgtcatttacaaaaagtcttgtgatattcaatcaagactctcaatcacttaaaaaaagtctagtggtattc 29448980  T
Q  364 aaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaa 463  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||    
T  29448979 aaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtaaaattttagcataaaaaagtctttcatgaa 29448880  T
Q  464 aacatgagatttcttatgattg 485  Q
    |||||||||||||||| |||||    
T  29448879 aacatgagatttcttaggattg 29448858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 216 - 485
Target Start/End: Complemental strand, 44762306 - 44762037
Alignment:
Q  216 atgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnngttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatg 315  Q
    |||| ||||||||||||||||||||||||||||||| ||||||       || ||||||||||||||||| ||||||||||||||       ||| | |     
T  44762306 atgaaaaagtcttgtggtattcaatcaagactcttttcaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcatgta 44762207  T
Q  316 gtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggatt 415  Q
    |||||||||||||| | ||||||||||       ||||||||||||| ||||| |||||| |||||||||||||||||||||||||||||||||||||||    
T  44762206 gtattcaatcaagactcttaatcacttaaaaaaagtctagtggtatttaaaattattcaagtttcgaaggattgtttaataaatcagattttgatggatt 44762107  T
Q  416 ttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttatgattg 485  Q
    |||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  44762106 ttgtgggattttttagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaagattg 44762037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 143; E-Value: 8e-75
Query Start/End: Original strand, 269 - 485
Target Start/End: Complemental strand, 3999861 - 3999645
Alignment:
Q  269 ttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaat 368  Q
    ||||||||||||||||| ||||||||||||||       ||||| |||||||||||||||| | ||||||||||        ||||||||||||||||||    
T  3999861 ttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaatctagtggtattcaaaat 3999762  T
Q  369 cattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 468  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||    
T  3999761 cattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagaatgaaaaagtctttcataaaaacat 3999662  T
Q  469 gagatttcttatgattg 485  Q
    ||||||||||| |||||    
T  3999661 gagatttcttaggattg 3999645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 166 - 485
Target Start/End: Original strand, 25418254 - 25418572
Alignment:
Q  166 ggggtgtatttgatcatgattctaagggattttaaaagannnnnnnnatcatgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnn 265  Q
    ||||| |||| ||||||||||||||| |||||||||| |        ||||||| ||  | ||||||||||||||||| |||||||||| |||           
T  25418254 ggggtttattggatcatgattctaagagattttaaaa-aatttttttatcatgaaaattttttgtggtattcaatcaaaactctttccattttaaaaaaa 25418352  T
Q  266 gttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaa 365  Q
    || ||||||||||||||||| ||||||||||||||       ||||| |||||||||||||||| | ||||||||||        ||||| |||||||||    
T  25418353 gtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagacttttaatcacttacaaaaaatctagcggtattcaa 25418452  T
Q  366 aatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 465  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||    
T  25418453 aatcattcaaatttgaaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttggcatgaaaaagtatttcatgaaaa 25418552  T
Q  466 catgagatttcttatgattg 485  Q
    ||||||||| |||| |||||    
T  25418553 catgagattccttaggattg 25418572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 161 - 484
Target Start/End: Original strand, 52114413 - 52114734
Alignment:
Q  161 atttaggggtgtatttgatcatgattctaagggattttaaaagannnnnnnnatcatgataaagtcttgtggtattcaatcaagactctttccaatttnn 260  Q
    ||||||||||||| | |||||||||||||||| |||||||||||        |||||||||||||||||||||||||||||||  || ||| ||||||      
T  52114413 atttaggggtgtactggatcatgattctaaggaattttaaaagattttttt-atcatgataaagtcttgtggtattcaatcaa--ctattttcaatttaa 52114509  T
Q  261 nnnnngttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnn-gtctagtggt 359  Q
          | ||||||||||||| ||| ||||||||||||||       ||||| |||||||||||||||| | ||||||||||        ||||||||||    
T  52114510 aaaaaatcttgtgttattcaaccaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagacttttaatcacttaaaaaaaagtctagtggt 52114609  T
Q  360 attcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttca 459  Q
    ||||||||| |||||||||||| |||||||||||||||||||||||||||| |||||||||| |||||||||| |||||||||||||||||| |||||      
T  52114610 attcaaaataattcaaatttcgcaggattgtttaataaatcagattttgatagattttgtggaattttctagtaaaattttagcatgaaaaaatcttttg 52114709  T
Q  460 tgaaaacatgagatttcttatgatt 484  Q
    |||||||||||||||||||| ||||    
T  52114710 tgaaaacatgagatttcttaggatt 52114734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 275 - 479
Target Start/End: Complemental strand, 33996751 - 33996547
Alignment:
Q  275 tattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattca 374  Q
    ||||||||||| ||||||||||||||       ||||| |||||||||||||||| | ||||||||||        || |||||||||||||||||||||    
T  33996751 tattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaatccagtggtattcaaaatcattca 33996652  T
Q  375 aatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatt 474  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| || |||||||||||||    
T  33996651 aatttcgaaggattgtttaataaatcagattttgatggattttgagggattttctagtgaaattttagcatgaaaaagtcttttataaaaacatgagatt 33996552  T
Q  475 tctta 479  Q
    |||||    
T  33996551 tctta 33996547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 227 - 470
Target Start/End: Complemental strand, 51699737 - 51699495
Alignment:
Q  227 ttgtggtattcaatcaagactctttccaatttnnnnnnngttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatca 326  Q
    ||||||||||||||||||||||||| ||||||       || |||| |||||||||||| ||||||||||||||        |||| |||||||||||||    
T  51699737 ttgtggtattcaatcaagactcttttcaatttaaaaaaagtcttgtattattcaatcaagattctttgtcatttaaaaaaaatcttgtggtattcaatca 51699638  T
Q  327 agattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattt 426  Q
    ||| | ||||||||||        ||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||||    
T  51699637 agactcttaatcacttaaaaaaa-tctagtggtattcaaaatcattcaaatttcgaaggattggttaataaataagattttgatgaattttgtgggattt 51699539  T
Q  427 tctagtgaaattttagcatgaaaaagtctttcatgaaaacatga 470  Q
    ||||||||||||||||||||||||| |||||| |||||||||||    
T  51699538 tctagtgaaattttagcatgaaaaaatctttcgtgaaaacatga 51699495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 277 - 485
Target Start/End: Complemental strand, 53929336 - 53929128
Alignment:
Q  277 ttcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaa 376  Q
    ||||||||| ||||||||||||||       ||||| |||||||||||||||| | ||||||||||       ||||||||||||||||||||||| |||    
T  53929336 ttcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcatttaaa 53929237  T
Q  377 tttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttc 476  Q
    | ||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||     
T  53929236 tatcgaacgattgtttaataaataagattttgatggattttgtaggattttctagtgaaattttagcatgaaaaaatctttaatgaaaacatgagatttt 53929137  T
Q  477 ttatgattg 485  Q
    ||| |||||    
T  53929136 ttaggattg 53929128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 275 - 485
Target Start/End: Complemental strand, 6035263 - 6035053
Alignment:
Q  275 tattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattca 374  Q
    ||||||||||| | ||||||||||||       |||||  ||||||||||||||||| || |||||||       |||| ||| ||||||||||||||||    
T  6035263 tattcaatcaagagtctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatcacttaaaaaaagtctcgtgatattcaaaatcattca 6035164  T
Q  375 aatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatt 474  Q
    |||||||||| | |||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  6035163 aatttcgaagcaatgtttaataaattagattttgatggattttgtgggattttctagtaaaattttagcatgaaaaagtctttcataaaaacatgagatt 6035064  T
Q  475 tcttatgattg 485  Q
    ||||| |||||    
T  6035063 tcttaagattg 6035053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 216 - 478
Target Start/End: Complemental strand, 36674399 - 36674137
Alignment:
Q  216 atgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnngttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatg 315  Q
    |||| ||||||||||||||||||||||||||| ||| ||||||       || ||||| ||||||||||| | ||||||||||||       |||||  |    
T  36674399 atgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgag 36674300  T
Q  316 gtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggatt 415  Q
    |||||||||||||| | || |||| ||       |||| ||||||||||||||||||||||||| |||||||||||||||||||  ||||||||||||||    
T  36674299 gtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggatt 36674200  T
Q  416 ttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 478  Q
    |||||||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||    
T  36674199 ttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 36674137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 170 - 477
Target Start/End: Original strand, 29029898 - 29030203
Alignment:
Q  170 tgtatttgatcatgattctaagggattttaaaagannnnnnnnatcatgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnngttt 269  Q
    |||||| ||||||||||||||||||||||||||||        ||||||| ||| | |||||||||||||||||||||| ||| ||||        || |    
T  29029898 tgtattggatcatgattctaagggattttaaaagacttttat-atcatgaaaaaatattgtggtattcaatcaagactcattctaattaagaaaaagtct 29029996  T
Q  270 tgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatc 369  Q
    ||||||||||||| || | ||||||||||||       ||||| |||||||||||||||| | ||||||||||       |||| |||||||||||||||    
T  29029997 tgtgttattcaattaagactctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaa-gtcttgtggtattcaaaatc 29030095  T
Q  370 attcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatg 469  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| ||||||    | ||| |||||||||||    
T  29030096 attcaaattttgaaggattgtttaataaatcagattttgatggattttgtggaattttctaatgaaattttaacatgaattttttttttatgaaaacatg 29030195  T
Q  470 agatttct 477  Q
    ||||||||    
T  29030196 agatttct 29030203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 216 - 478
Target Start/End: Complemental strand, 44906782 - 44906520
Alignment:
Q  216 atgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnngttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatg 315  Q
    |||| ||||||||||||||||||||||||||| ||| ||| ||       || ||||| ||||||||||| | ||||||||||||       |||||  |    
T  44906782 atgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgag 44906683  T
Q  316 gtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggatt 415  Q
    |||||||||||||| | || |||||||       |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||    
T  44906682 gtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaatt 44906583  T
Q  416 ttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 478  Q
    |||||||||||| ||||| ||||||| || ||||| |||||||||||||| ||||||||||||    
T  44906582 ttgtgggattttgtagtgtaattttaacaagaaaatgtctttcatgaaaagatgagatttctt 44906520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 166 - 450
Target Start/End: Original strand, 22057651 - 22057933
Alignment:
Q  166 ggggtgtatttgatcatgattctaagggattttaaaagannnnnnnnatcatgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnn 265  Q
    |||||||||| ||||||||||||||||||||||||||||        ||||||| ||||| |||||||||||||||     ||||||||||||           
T  22057651 ggggtgtattggatcatgattctaagggattttaaaagactttttttatcatgaaaaagtattgtggtattcaatcgt---tctttccaatttaaaaaaa 22057747  T
Q  266 gttttgtgttattcaatcaaaattctttgtcatttnnnnnnngt-cttatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattca 364  Q
    || ||||||||||||||||| ||||||||||||||          ||| |||||||| ||||||| | || |||||||        |||||||||||| |    
T  22057748 gtcttgtgttattcaatcaagattctttgtcatttaaaaaaaaaacttgtggtattccatcaagactcttgatcacttaaaaaaaatctagtggtattta 22057847  T
Q  365 aaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaa 450  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  22057848 aaatcattcaaatttcgatggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttaacatgaaaa 22057933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 216 - 478
Target Start/End: Original strand, 11431463 - 11431725
Alignment:
Q  216 atgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnngttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatg 315  Q
    |||| ||||||||||||||||||||||||||| ||| ||||||       || ||||| |||||||| || | ||||||||||||       |||||  |    
T  11431463 atgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaataaagactctttgtcattttaaaaaagtcttgag 11431562  T
Q  316 gtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggatt 415  Q
    |||||||||||||| | || |||| ||       |||| |||||||||||||||||| ||||||||||||||||||||||||||  ||||||| ||||||    
T  11431563 gtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcatttaaatttcgaaggattgtttaataaattggattttggtggatt 11431662  T
Q  416 ttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 478  Q
    |||||||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||    
T  11431663 ttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 11431725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 356 - 485
Target Start/End: Original strand, 5825139 - 5825268
Alignment:
Q  356 tggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtct 455  Q
    |||||||||||||||||||||||| |||||||||||||||||||  ||||||||| |||||||||||||||| |||||||||| ||||||||||||| ||    
T  5825139 tggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatagattttgtgggattttttagtgaaattctagcatgaaaaaggct 5825238  T
Q  456 ttcatgaaaacatgagatttcttatgattg 485  Q
    ||||||||||||||||||||||||||||||    
T  5825239 ttcatgaaaacatgagatttcttatgattg 5825268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 213 - 431
Target Start/End: Complemental strand, 1440224 - 1440006
Alignment:
Q  213 atcatgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnngttttgtgttattcaatcaaaattctttgtcatttnnnnnnn-gtct 311  Q
    ||||||| ||||||||||||||||||||||||||| ||| ||||||       || ||||||||||||||||| ||||||||||||||        || |    
T  1440224 atcatgaaaaagtcttgtggtattcaatcaagactattttcaatttaaaaaa-gtcttgtgttattcaatcaagattctttgtcatttaaaaaaaagttt 1440126  T
Q  312 tatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 411  Q
    | |||||||||||||||| | ||||||||||       ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  1440125 tgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttccaaggattgtttaataaatcagattttgatg 1440026  T
Q  412 gattttgtgggattttctag 431  Q
    |||||| |||||||||||||    
T  1440025 gattttatgggattttctag 1440006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 269 - 478
Target Start/End: Original strand, 17946278 - 17946487
Alignment:
Q  269 ttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaat 368  Q
    ||||| ||||||||||| ||||||||||||||       |||||  ||||||||||||||| | || |||||||       |||| ||| ||||||||||    
T  17946278 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcgtgatattcaaaat 17946377  T
Q  369 cattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 468  Q
    |||||||||||| ||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| ||    
T  17946378 cattcaaatttcaaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 17946477  T
Q  469 gagatttctt 478  Q
    ||||||||||    
T  17946478 gagatttctt 17946487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 225 - 478
Target Start/End: Original strand, 40897090 - 40897343
Alignment:
Q  225 tcttgtggtattcaatcaagactctttccaatttnnnnnnngttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaat 324  Q
    ||||||||||||||||||||| | ||| ||| ||       || ||||| |||||| |||| | ||||||||||||       |||||  ||||||||||    
T  40897090 tcttgtggtattcaatcaagattttttgcaacttaaaaaaagtcttgtggtattcattcaagactctttgtcattttaaaaaagtcttgaggtattcaat 40897189  T
Q  325 caagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggat 424  Q
    ||||| | || |||||||       ||||  ||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  40897190 caagacttttcatcacttaaaaaaagtcttatggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggat 40897289  T
Q  425 tttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 478  Q
    ||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||    
T  40897290 tttatagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 40897343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 350 - 478
Target Start/End: Original strand, 18749683 - 18749811
Alignment:
Q  350 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 449  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || ||||    
T  18749683 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 18749782  T
Q  450 aagtctttcatgaaaacatgagatttctt 478  Q
    |||||||||||||||| ||||||||||||    
T  18749783 aagtctttcatgaaaagatgagatttctt 18749811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 350 - 478
Target Start/End: Original strand, 32580247 - 32580375
Alignment:
Q  350 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 449  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| |||||||| ||||| ||||||| || ||||    
T  32580247 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgagggattttgtagtgtaattttaacaagaaa 32580346  T
Q  450 aagtctttcatgaaaacatgagatttctt 478  Q
    |||||||||||||||| ||||||||||||    
T  32580347 aagtctttcatgaaaagatgagatttctt 32580375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 355 - 478
Target Start/End: Complemental strand, 34484160 - 34484037
Alignment:
Q  355 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 454  Q
    |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || |||||| ||    
T  34484160 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaaatc 34484061  T
Q  455 tttcatgaaaacatgagatttctt 478  Q
    ||||||||||| ||||||||||||    
T  34484060 tttcatgaaaagatgagatttctt 34484037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 350 - 485
Target Start/End: Original strand, 27899415 - 27899540
Alignment:
Q  350 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 449  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||          | |||||||||||||||||||||||||||||    
T  27899415 gtctggtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg----------taggattttctagtgaaattttagcatgaaa 27899504  T
Q  450 aagtctttcatgaaaacatgagatttcttatgattg 485  Q
    ||||||||||||||||||||| ||||||||||||||    
T  27899505 aagtctttcatgaaaacatgaaatttcttatgattg 27899540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 216 - 478
Target Start/End: Complemental strand, 50903512 - 50903247
Alignment:
Q  216 atgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnngttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatg 315  Q
    |||| ||||||||||||||||||||||||||| ||| ||| ||       || ||||| ||||||||||| | ||||||||||||       |||||| |    
T  50903512 atgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttaag 50903413  T
Q  316 gtattcaatcaagattattaatcacttnnnnnnn---gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatgg 412  Q
    |||||||||||||| | || |||| ||          |||| ||||||||||||||||||||||||  |||||||||||||||||||  |||||||||||    
T  50903412 gtattcaatcaagactttttatcatttaaaaaaaaaagtcttgtggtattcaaaatcattcaaattaagaaggattgtttaataaattggattttgatgg 50903313  T
Q  413 attttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 478  Q
    ||||||||||||||| ||||| ||||||| || |||||| ||||| ||||||| ||||||||||||    
T  50903312 attttgtgggattttgtagtgtaattttaacaagaaaaaatcttttatgaaaatatgagatttctt 50903247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 355 - 478
Target Start/End: Original strand, 54628920 - 54629043
Alignment:
Q  355 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 454  Q
    |||||||||||||||||||||||||| ||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || |||||||||    
T  54628920 gtggtattcaaaatcattcaaatttcaaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtc 54629019  T
Q  455 tttcatgaaaacatgagatttctt 478  Q
    |||||| |||| ||||||||||||    
T  54629020 tttcataaaaagatgagatttctt 54629043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 278 - 478
Target Start/End: Original strand, 26107260 - 26107460
Alignment:
Q  278 tcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaat 377  Q
    |||||||| ||||||||||||||       |||||  ||||||||||||||| | || |||| ||       |||| |||||||||||||||||||||||    
T  26107260 tcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcaattaaaaaaagtcttgtggtattcaaaatcattcaaat 26107359  T
Q  378 ttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttct 477  Q
    ||||||||||||||||||||||  ||||||||||||||||||| |||||| ||||| ||||||| || |||||||| |||||| |||| |||||||||||    
T  26107360 ttcgaaggattgtttaataaattggattttgatggattttgtgtgattttgtagtgtaattttaacaagaaaaagtatttcataaaaagatgagatttct 26107459  T
Q  478 t 478  Q
    |    
T  26107460 t 26107460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 397 - 485
Target Start/End: Complemental strand, 6131321 - 6131233
Alignment:
Q  397 aatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttatgattg 485  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  6131321 aatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 6131233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 315 - 465
Target Start/End: Complemental strand, 51737896 - 51737746
Alignment:
Q  315 ggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggat 414  Q
    ||||||||||||||| | || |||||||       |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  51737896 ggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggat 51737797  T
Q  415 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 465  Q
    ||||||||||||| | ||| ||||||| || ||||||||||||||| ||||    
T  51737796 tttgtgggattttgttgtgtaattttaacaagaaaaagtctttcataaaaa 51737746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 355 - 478
Target Start/End: Complemental strand, 31646414 - 31646293
Alignment:
Q  355 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 454  Q
    ||||||||||||||||||||||||||||| ||||||||||| |||  |||||||||||||||||||||||||| ||||| ||||||| || |||||||||    
T  31646414 gtggtattcaaaatcattcaaatttcgaaagattgtttaatgaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtc 31646315  T
Q  455 tttcatgaaaacatgagatttctt 478  Q
    ||||||||||  ||||||||||||    
T  31646314 tttcatgaaa--atgagatttctt 31646293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 350 - 478
Target Start/End: Original strand, 48379228 - 48379356
Alignment:
Q  350 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 449  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||| ||||| |||||||  | ||||    
T  48379228 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaataagaaa 48379327  T
Q  450 aagtctttcatgaaaacatgagatttctt 478  Q
    | |||||||||||||| || |||||||||    
T  48379328 atgtctttcatgaaaagatcagatttctt 48379356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 270 - 478
Target Start/End: Complemental strand, 52618180 - 52617978
Alignment:
Q  270 tgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatc 369  Q
    |||| ||||||||||| | ||||||||||||       |||||  ||||||||||||||| | || |||||||       |||| |||||||||||||||    
T  52618180 tgtgatattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatc 52618081  T
Q  370 attcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatg 469  Q
    ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||      || ||||||||||| |||| |||    
T  52618080 attcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttt------aacaagtctttcataaaaagatg 52617987  T
Q  470 agatttctt 478  Q
    |||||||||    
T  52617986 agatttctt 52617978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 350 - 478
Target Start/End: Original strand, 52810449 - 52810577
Alignment:
Q  350 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 449  Q
    |||| ||||||||||||||||||||||||| ||| |||||||||||||||   ||||||||||||||||||||||||| ||| | ||||||| || ||||    
T  52810449 gtcttgtggtattcaaaatcattcaaattttgaatgattgtttaataaattgaattttgatggattttgtgggattttgtagcgtaattttaacaagaaa 52810548  T
Q  450 aagtctttcatgaaaacatgagatttctt 478  Q
    || ||||||||||||| ||||||||||||    
T  52810549 aaatctttcatgaaaagatgagatttctt 52810577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 374 - 485
Target Start/End: Complemental strand, 1440005 - 1439894
Alignment:
Q  374 aaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagat 473  Q
    |||||| ||||||||||||||||||| |||||||||| ||||||||||||||||||||| ||||||| | |||||||||||||||| |||||||||||||    
T  1440005 aaatttggaaggattgtttaataaattagattttgatagattttgtgggattttctagtaaaattttggtatgaaaaagtctttcacgaaaacatgagat 1439906  T
Q  474 ttcttatgattg 485  Q
    || ||| |||||    
T  1439905 tttttaggattg 1439894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 216 - 419
Target Start/End: Original strand, 10660472 - 10660675
Alignment:
Q  216 atgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnngttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatg 315  Q
    |||| ||||||||||||||||||||||||||| ||| ||||||       || ||||| ||||||||||| | ||||||||||||       |||||  |    
T  10660472 atgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgag 10660571  T
Q  316 gtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggatt 415  Q
    |||||||||||||| | || |||| ||       || | |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  10660572 gtattcaatcaagacttttcatcatttaaaaaaagtattgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggatt 10660671  T
Q  416 ttgt 419  Q
    ||||    
T  10660672 ttgt 10660675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 315 - 474
Target Start/End: Original strand, 20833028 - 20833187
Alignment:
Q  315 ggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggat 414  Q
    ||||||||||||||| | || |||||||       |||| ||||||||||||||||||||||||  |||||||||||||||||||  |||||||||||||    
T  20833028 ggtattcaatcaagaattttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaattcggaaggattgtttaataaattggattttgatggat 20833127  T
Q  415 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatt 474  Q
    |||||| |||||  ||||| ||||||| || |||||||| ||||||||||| || |||||    
T  20833128 tttgtgagatttattagtgtaattttaacaagaaaaagtatttcatgaaaagataagatt 20833187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 216 - 408
Target Start/End: Complemental strand, 23753655 - 23753463
Alignment:
Q  216 atgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnngttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatg 315  Q
    |||| ||||||||||||||||||||||||||| ||| ||||||       || ||||| ||||||||||| ||||||||||||||       |||||  |    
T  23753655 atgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgag 23753556  T
Q  316 gtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg 408  Q
    |||||||||||||| | || |||| ||       |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  23753555 gtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 23753463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 221 - 475
Target Start/End: Original strand, 44276331 - 44276571
Alignment:
Q  221 aaagtcttgtggtattcaatcaagactctttccaatttnnnnnnngttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtatt 320  Q
    |||||| ||||||||||||| ||||||||||  |||||       || ||||| |||||||| |||| ||||||||||||       |||||  ||||||    
T  44276331 aaagtcatgtggtattcaattaagactctttgtaatttaaaaaaagtcttgtggtattcaattaaaactctttgtcattttaaaaaagtcttgaggtatt 44276430  T
Q  321 caatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtg 420  Q
    ||||||||||| || |||||||       ||||  |||||||||||||||||||||||    |||||||||||||||||          |||||||||||    
T  44276431 caatcaagatttttcatcacttaaaaaaagtctcatggtattcaaaatcattcaaatt----aggattgtttaataaat----------tggattttgtg 44276516  T
Q  421 ggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagattt 475  Q
    ||||||||||||||||||||| || |||||| ||||||||||| |||||||||||    
T  44276517 ggattttctagtgaaattttaacaagaaaaaatctttcatgaagacatgagattt 44276571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 269 - 478
Target Start/End: Complemental strand, 10728857 - 10728658
Alignment:
Q  269 ttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaat 368  Q
    ||||| ||||||||||| | ||||||||||||       |||||  ||||||||||||||| | || |||||||       |||| |||||||| |||||    
T  10728857 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttacaaaaagtcttgtggtatttaaaat 10728758  T
Q  369 cattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 468  Q
    ||||||||||| |||||||||||||||||||  |||||||||||||||||          ||||| ||||||| || |||||||||||||||||||| ||    
T  10728757 cattcaaatttggaaggattgtttaataaattggattttgatggattttg----------tagtgtaattttaacaagaaaaagtctttcatgaaaagat 10728668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 351 - 485
Target Start/End: Original strand, 52079999 - 52080117
Alignment:
Q  351 tctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaa 450  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||          ||||||||||||||||||| |||||||||||||||||||    
T  52079999 tctagtggtattcaaaatcattcaaattttgaaggattgtttaataaatca----------gattttgtgggattttctaatgaaattttagcatgaaaa 52080088  T
Q  451 agtctttcatgaaaacatgagatttcttatgattg 485  Q
    |||      |||||||||||||||||||| |||||    
T  52080089 agt------tgaaaacatgagatttcttaggattg 52080117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 359 - 453
Target Start/End: Original strand, 55235264 - 55235359
Alignment:
Q  359 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatgga-ttttgtgggattttctagtgaaattttagcatgaaaaagt 453  Q
    ||||||||||||||||||||||||| |||||||||||||||  | |||||||||| ||||||||||||||||| |||||||||||||| |||||||    
T  55235264 tattcaaaatcattcaaatttcgaaagattgtttaataaattggtttttgatggatttttgtgggattttctaatgaaattttagcataaaaaagt 55235359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 268 - 478
Target Start/End: Original strand, 37454850 - 37455050
Alignment:
Q  268 tttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaa 367  Q
    |||||| ||||||||||| ||||||||||||||       |||||  | ||||||||||||| | || |||| ||       |||| |||||||||||||    
T  37454850 tttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgagatattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaa 37454949  T
Q  368 tcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaaca 467  Q
    |||||||||||||||| |||||||||||||||          || ||||||||||||||| ||||| ||||||| || |||||||| ||||||||||| |    
T  37454950 tcattcaaatttcgaatgattgtttaataaat----------tgaattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaaga 37455039  T
Q  468 tgagatttctt 478  Q
    |||||||||||    
T  37455040 tgagatttctt 37455050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 269 - 478
Target Start/End: Original strand, 39038030 - 39038229
Alignment:
Q  269 ttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaat 368  Q
    ||||| ||||||||||| | ||||||||||||       |||||  ||||||||||||||| | || |||||||       |||| ||||||| ||||||    
T  39038030 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcactttaaaaaagtcttgtggtatccaaaat 39038129  T
Q  369 cattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 468  Q
    |||||||||||||||| ||||||||||||||  |||||||||||||||||          ||||| ||||||| || ||||||||||||||| |||| ||    
T  39038130 cattcaaatttcgaagaattgtttaataaattggattttgatggattttg----------tagtgtaattttaacaagaaaaagtctttcataaaaagat 39038219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 350 - 478
Target Start/End: Complemental strand, 39842619 - 39842501
Alignment:
Q  350 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 449  Q
    |||| ||| |||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||||          || || ||||||| || ||||    
T  39842619 gtctcgtgatattcaaaatcattcaaatttcgaagaattgtttaataaattagattttgacggattttg----------taatgtaattttaacaagaaa 39842530  T
Q  450 aagtctttcatgaaaacatgagatttctt 478  Q
    |||||||||||||||| ||||||||||||    
T  39842529 aagtctttcatgaaaagatgagatttctt 39842501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 350 - 478
Target Start/End: Complemental strand, 50762185 - 50762067
Alignment:
Q  350 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 449  Q
    |||| ||||||||||||||||||| ||||||||| |||||||| ||||||  |||||||||||||||||          ||||| ||||||| || ||||    
T  50762185 gtcttgtggtattcaaaatcattctaatttcgaatgattgtttgataaattggattttgatggattttg----------tagtgtaattttaacaagaaa 50762096  T
Q  450 aagtctttcatgaaaacatgagatttctt 478  Q
    |||||||||||||||| ||||||||||||    
T  50762095 aagtctttcatgaaaagatgagatttctt 50762067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 350 - 467
Target Start/End: Original strand, 6975817 - 6975924
Alignment:
Q  350 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 449  Q
    |||| |||||||||||||||||||||||||||||| ||| |||| |||||          |||| |||||||||||||||||| |||||| |||||||||    
T  6975817 gtcttgtggtattcaaaatcattcaaatttcgaagaattatttactaaat----------tggaatttgtgggattttctagtaaaatttgagcatgaaa 6975906  T
Q  450 aagtctttcatgaaaaca 467  Q
     |||||||||||||||||    
T  6975907 cagtctttcatgaaaaca 6975924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 315 - 413
Target Start/End: Complemental strand, 539574 - 539476
Alignment:
Q  315 ggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatgga 413  Q
    ||||||||||||||||| || |||| ||       |||| |||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||    
T  539574 ggtattcaatcaagatttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattatttaataaattggattttgatgga 539476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 432 - 485
Target Start/End: Complemental strand, 33807733 - 33807680
Alignment:
Q  432 tgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttatgattg 485  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  33807733 tgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 33807680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 166 - 249
Target Start/End: Complemental strand, 12734158 - 12734076
Alignment:
Q  166 ggggtgtatttgatcatgattctaagggattttaaaagannnnnnnnatcatgataaagtcttgtggtattcaatcaagactct 249  Q
    |||||||||| ||||||||||||||||||||||||||||        ||||||| |||||||||||||||||||||||||||||    
T  12734158 ggggtgtattggatcatgattctaagggattttaaaaga-cttttttatcatgaaaaagtcttgtggtattcaatcaagactct 12734076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 421 - 478
Target Start/End: Original strand, 45862983 - 45863040
Alignment:
Q  421 ggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 478  Q
    ||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||    
T  45862983 ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 45863040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 213 - 257
Target Start/End: Complemental strand, 6131484 - 6131440
Alignment:
Q  213 atcatgataaagtcttgtggtattcaatcaagactctttccaatt 257  Q
    ||||||| ||||| |||||||||||||||||||||||||||||||    
T  6131484 atcatgaaaaagttttgtggtattcaatcaagactctttccaatt 6131440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 410 - 478
Target Start/End: Complemental strand, 15492942 - 15492874
Alignment:
Q  410 tggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 478  Q
    |||||||||| |||| |||||||||||||||| || |||||| |||||||||||  ||| |||||||||    
T  15492942 tggattttgtaggatattctagtgaaattttaacaagaaaaaatctttcatgaagtcataagatttctt 15492874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 350 - 406
Target Start/End: Complemental strand, 23535946 - 23535890
Alignment:
Q  350 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattt 406  Q
    |||| ||||||||||||||||||||||||| ||||||| ||||||| ||| ||||||    
T  23535946 gtcttgtggtattcaaaatcattcaaatttagaaggatcgtttaattaattagattt 23535890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 422 - 477
Target Start/End: Original strand, 12103733 - 12103789
Alignment:
Q  422 gattttctagtgaaattttagcatgaaaaagtctttcatgaaaaca-tgagatttct 477  Q
    |||||||||||||||||||| || ||| |||||||||||||| ||| ||||||||||    
T  12103733 gattttctagtgaaattttaacaagaataagtctttcatgaagacattgagatttct 12103789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 251
Target Start/End: Complemental strand, 10728868 - 10728833
Alignment:
Q  216 atgataaagtcttgtggtattcaatcaagactcttt 251  Q
    |||| |||||||||||||||||||||||||||||||    
T  10728868 atgaaaaagtcttgtggtattcaatcaagactcttt 10728833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 165 - 204
Target Start/End: Complemental strand, 33996810 - 33996771
Alignment:
Q  165 aggggtgtatttgatcatgattctaagggattttaaaaga 204  Q
    ||||||||||| |||||||||||||||||||||| |||||    
T  33996810 aggggtgtattggatcatgattctaagggattttgaaaga 33996771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 163 - 202
Target Start/End: Original strand, 52079878 - 52079917
Alignment:
Q  163 ttaggggtgtatttgatcatgattctaagggattttaaaa 202  Q
    ||||||||||||| ||||||||||||||| ||||||||||    
T  52079878 ttaggggtgtattggatcatgattctaagtgattttaaaa 52079917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 221 - 251
Target Start/End: Original strand, 6975733 - 6975763
Alignment:
Q  221 aaagtcttgtggtattcaatcaagactcttt 251  Q
    |||||||||||||||||||||||||||||||    
T  6975733 aaagtcttgtggtattcaatcaagactcttt 6975763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 166 - 204
Target Start/End: Original strand, 16010751 - 16010789
Alignment:
Q  166 ggggtgtatttgatcatgattctaagggattttaaaaga 204  Q
    |||||||||| |||||| |||||||||||||||||||||    
T  16010751 ggggtgtattggatcataattctaagggattttaaaaga 16010789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 221 - 251
Target Start/End: Original strand, 18749554 - 18749584
Alignment:
Q  221 aaagtcttgtggtattcaatcaagactcttt 251  Q
    |||||||||||||||||||||||||||||||    
T  18749554 aaagtcttgtggtattcaatcaagactcttt 18749584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 221 - 251
Target Start/End: Complemental strand, 27240465 - 27240435
Alignment:
Q  221 aaagtcttgtggtattcaatcaagactcttt 251  Q
    |||||||||||||||||||||||||||||||    
T  27240465 aaagtcttgtggtattcaatcaagactcttt 27240435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 221 - 251
Target Start/End: Complemental strand, 34484252 - 34484222
Alignment:
Q  221 aaagtcttgtggtattcaatcaagactcttt 251  Q
    |||||||||||||||||||||||||||||||    
T  34484252 aaagtcttgtggtattcaatcaagactcttt 34484222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 221 - 251
Target Start/End: Complemental strand, 50762272 - 50762242
Alignment:
Q  221 aaagtcttgtggtattcaatcaagactcttt 251  Q
    |||||||||||||||||||||||||||||||    
T  50762272 aaagtcttgtggtattcaatcaagactcttt 50762242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 221 - 251
Target Start/End: Complemental strand, 51737949 - 51737919
Alignment:
Q  221 aaagtcttgtggtattcaatcaagactcttt 251  Q
    |||||||||||||||||||||||||||||||    
T  51737949 aaagtcttgtggtattcaatcaagactcttt 51737919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 221 - 251
Target Start/End: Original strand, 54628827 - 54628857
Alignment:
Q  221 aaagtcttgtggtattcaatcaagactcttt 251  Q
    |||||||||||||||||||||||||||||||    
T  54628827 aaagtcttgtggtattcaatcaagactcttt 54628857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 250
Target Start/End: Complemental strand, 3999825 - 3999796
Alignment:
Q  221 aaagtcttgtggtattcaatcaagactctt 250  Q
    ||||||||||||||||||||||||||||||    
T  3999825 aaagtcttgtggtattcaatcaagactctt 3999796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 250
Target Start/End: Complemental strand, 33996721 - 33996692
Alignment:
Q  221 aaagtcttgtggtattcaatcaagactctt 250  Q
    ||||||||||||||||||||||||||||||    
T  33996721 aaagtcttgtggtattcaatcaagactctt 33996692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 250
Target Start/End: Complemental strand, 53929308 - 53929279
Alignment:
Q  221 aaagtcttgtggtattcaatcaagactctt 250  Q
    ||||||||||||||||||||||||||||||    
T  53929308 aaagtcttgtggtattcaatcaagactctt 53929279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 258
Target Start/End: Complemental strand, 53929390 - 53929345
Alignment:
Q  213 atcatgataaagtcttgtggtattcaatcaagactctttccaattt 258  Q
    ||||||| ||| | ||||||||||||||||||||||||| ||||||    
T  53929390 atcatgaaaaaattttgtggtattcaatcaagactcttttcaattt 53929345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 195; Significance: 1e-106; HSPs: 68)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 167 - 509
Target Start/End: Original strand, 973074 - 973416
Alignment:
Q  167 gggtgtatttgatcatgattctaagggattttaaaagannnnnnnnatcatgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnng 266  Q
    ||||||||| ||||||||||||||||||||||||||||        ||||||| ||||||||||||||||||||||||||||||||||||||       |    
T  973074 gggtgtattggatcatgattctaagggattttaaaagattttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaag 973173  T
Q  267 ttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaa 366  Q
    ||||||||||||||||||| ||||||||||||||       ||||| |||||||||||||||| | ||||||||||        | ||||||||||||||    
T  973174 ttttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaatttagtggtattcaaa 973273  T
Q  367 atcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaac 466  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  973274 atcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcaagaaaaagtctttcatgaaaac 973373  T
Q  467 atgagatttcttatgattgnnnnnnncttttaagattttacta 509  Q
    ||||||||||||| |||||       |||||||||||||||||    
T  973374 atgagatttcttaggattgtttttttcttttaagattttacta 973416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 184; E-Value: 3e-99
Query Start/End: Original strand, 166 - 509
Target Start/End: Complemental strand, 40996967 - 40996624
Alignment:
Q  166 ggggtgtatttgatcatgattctaagggattttaaaagannnnnnnnatcatgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnn 265  Q
    |||||||||| |||||||||||||||||||||||||| |        ||||||| | ||||||||||||||||||||||||||||||||||||           
T  40996967 ggggtgtattggatcatgattctaagggattttaaaatattttttttatcatgaaagagtcttgtggtattcaatcaagactctttccaatttaaaaaaa 40996868  T
Q  266 gttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaa 365  Q
    || | ||||||||||||||| ||||||||||||||       ||||| |||||||||||||||| | |||||| |||       ||||||||||||||||    
T  40996867 gtctcgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcgcttaaaaaaagtctagtggtattcaa 40996768  T
Q  366 aatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 465  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  40996767 aatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtaggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 40996668  T
Q  466 catgagatttcttatgattgnnnnnnncttttaagattttacta 509  Q
    |||||||||||||| |||||       |||||||||||||||||    
T  40996667 catgagatttcttaggattgtttttttcttttaagattttacta 40996624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 183; E-Value: 1e-98
Query Start/End: Original strand, 166 - 509
Target Start/End: Complemental strand, 18915052 - 18914710
Alignment:
Q  166 ggggtgtatttgatcatgattctaagggattttaaaagannnnnnnnatcatgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnn 265  Q
    |||||||||| |||||||  |||||||||||||||||||        ||||||| ||||||||||||||||||||||||||||||||||||||           
T  18915052 ggggtgtattggatcatgtatctaagggattttaaaagactttttt-atcatgaaaaagtcttgtggtattcaatcaagactctttccaattttaaaaaa 18914954  T
Q  266 gttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaa 365  Q
    || |||||||||||||||||||||||||||| |||       ||||| |||||||||||||||| | ||||||||||       ||||||||||||||||    
T  18914953 gtcttgtgttattcaatcaaaattctttgtcctttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaa 18914854  T
Q  366 aatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 465  Q
    ||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18914853 aatcattcaaatttcaaaggtttgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 18914754  T
Q  466 catgagatttcttatgattgnnnnnnncttttaagattttacta 509  Q
    |||||||||||||| |||||       |||||||||||||||||    
T  18914753 catgagatttcttaggattgtttttttcttttaagattttacta 18914710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 183; E-Value: 1e-98
Query Start/End: Original strand, 166 - 509
Target Start/End: Original strand, 30440686 - 30441028
Alignment:
Q  166 ggggtgtatttgatcatgattctaagggattttaaaagannnnnnnnatcatgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnn 265  Q
    |||||||||| ||||||||||||||||||||||||||||        ||||||| ||| ||||||||||||||||||||||||||||||||||           
T  30440686 ggggtgtattggatcatgattctaagggattttaaaagactttttt-atcatgaaaaaatcttgtggtattcaatcaagactctttccaatttaaaaaaa 30440784  T
Q  266 gttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaa 365  Q
    || ||||||||||||||||| ||||||||||||||        |||| |||||||||||||||| | ||||||||||       ||||||||||||||||    
T  30440785 gtcttgtgttattcaatcaagattctttgtcatttaaaaaaaatcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaa 30440884  T
Q  366 aatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 465  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  30440885 aatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagtatgaaaaagtctttcgtgaaaa 30440984  T
Q  466 catgagatttcttatgattgnnnnnnncttttaagattttacta 509  Q
    |||||||||||||| |||||       |||||||||||||||||    
T  30440985 catgagatttcttaggattgtttttttcttttaagattttacta 30441028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 182; E-Value: 4e-98
Query Start/End: Original strand, 167 - 484
Target Start/End: Complemental strand, 43581406 - 43581090
Alignment:
Q  167 gggtgtatttgatcatgattctaagggattttaaaagannnnnnnnatcatgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnng 266  Q
    ||||||||| |||||||||||||| | |||||||||||        ||||||| ||||||||||||||||||||||||||||||||||||||       |    
T  43581406 gggtgtattggatcatgattctaaagaattttaaaagactttttt-atcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaag 43581308  T
Q  267 ttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaa 366  Q
    | ||||||||||||||||| ||||||||||||||       ||||| | |||||||||||||| | ||||||||||       |||||||||||||||||    
T  43581307 tcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgttgtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaa 43581208  T
Q  367 atcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaac 466  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43581207 atcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaac 43581108  T
Q  467 atgagatttcttatgatt 484  Q
    ||||||||||||| ||||    
T  43581107 atgagatttcttaggatt 43581090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 180; E-Value: 7e-97
Query Start/End: Original strand, 166 - 485
Target Start/End: Complemental strand, 44343713 - 44343395
Alignment:
Q  166 ggggtgtatttgatcatgattctaagggattttaaaagannnnnnnnatcatgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnn 265  Q
    |||||||||| ||||||||||||||||||||||||||||        ||||||| ||||||||||||||||||||||||||||||||||||||           
T  44343713 ggggtgtattggatcatgattctaagggattttaaaagactttttt-atcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaa 44343615  T
Q  266 gttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaa 365  Q
    || ||||||||||||||||| ||||||||||||||       ||||| || ||||||||||||| | ||||||||||       || |||||||||| ||    
T  44343614 gtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtgatattcaatcaagactcttaatcacttaaaaaaagtttagtggtatttaa 44343515  T
Q  366 aatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 465  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  44343514 aatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcacgaaaa 44343415  T
Q  466 catgagatttcttatgattg 485  Q
    |||||||||||||| |||||    
T  44343414 catgagatttcttaggattg 44343395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 173; E-Value: 1e-92
Query Start/End: Original strand, 166 - 485
Target Start/End: Original strand, 12893298 - 12893616
Alignment:
Q  166 ggggtgtatttgatcatgattctaagggattttaaaagannnnnnnnatcatgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnn 265  Q
    |||||||||| |||||||||||||||| |||||||||||         |||||| ||||||||||||||||||||||||||||||||||||||           
T  12893298 ggggtgtattggatcatgattctaaggtattttaaaagatttttttt-tcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaa 12893396  T
Q  266 gttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaa 365  Q
    || ||||||||||||||||| ||||||||||||||       ||||| ||||||| |||||||| | ||||||||||       ||||| ||||||||||    
T  12893397 gtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtatttaatcaagactcttaatcacttaaaaaaagtctaatggtattcaa 12893496  T
Q  366 aatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 465  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  12893497 aatcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtgagattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 12893596  T
Q  466 catgagatttcttatgattg 485  Q
    |||||||||||||| |||||    
T  12893597 catgagatttcttaggattg 12893616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 170; E-Value: 7e-91
Query Start/End: Original strand, 167 - 509
Target Start/End: Original strand, 47914157 - 47914498
Alignment:
Q  167 gggtgtatttgatcatgattctaagggattttaaaagannnnnnnnatcatgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnng 266  Q
    |||||||||  |||||||||||||||||||||||||||        || |||| ||||||||||||||||||||||| ||||||| ||||||       |    
T  47914157 gggtgtattgaatcatgattctaagggattttaaaagacttattt-ataatgaaaaagtcttgtggtattcaatcaatactcttttcaattttaaaaaag 47914255  T
Q  267 ttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaa 366  Q
    | ||||||||||||||||| ||||||||||||||       ||| | |||||||||||||||| | ||||||||||       |||||||| ||||||||    
T  47914256 tcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtgatattcaaa 47914355  T
Q  367 atcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaac 466  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47914356 atcattcaaatttcgaaggattgtttaataaataagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaac 47914455  T
Q  467 atgagatttcttatgattgnnnnnnncttttaagattttacta 509  Q
    ||||||||||||| |||||       |||||||||||||||||    
T  47914456 atgagatttcttaagattgtttttttcttttaagattttacta 47914498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 165; E-Value: 6e-88
Query Start/End: Original strand, 221 - 509
Target Start/End: Original strand, 34695217 - 34695505
Alignment:
Q  221 aaagtcttgtggtattcaatcaagactctttccaatttnnnnnnngttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtatt 320  Q
    ||||||||||||||||||||||||||||||||||||||       || ||||||||||||||||| |||| |||||||||       || || |||||||    
T  34695217 aaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattccttgtcatttaaaaaaagttttgtggtatt 34695316  T
Q  321 caatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtg 420  Q
    ||||||||| | ||||||||||       ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34695317 caatcaagactcttaatcacttaaaaaaagtccagtggtattcaaaaccattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtg 34695416  T
Q  421 ggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttatgattgnnnnnnncttttaagattttacta 509  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||       |||||||||||||||||    
T  34695417 ggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttcttttaagattttacta 34695505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 162; E-Value: 4e-86
Query Start/End: Original strand, 167 - 509
Target Start/End: Original strand, 47879059 - 47879400
Alignment:
Q  167 gggtgtatttgatcatgattctaagggattttaaaagannnnnnnnatcatgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnng 266  Q
    |||||||||  |||||||||||||||||||||||||||        || |||| ||||||||||||||||||||||| ||||||| ||||||       |    
T  47879059 gggtgtattgaatcatgattctaagggattttaaaagacttattt-ataatgaaaaagtcttgtggtattcaatcaatactcttttcaattttaaaaaag 47879157  T
Q  267 ttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaa 366  Q
    | ||||||||||||||||| ||||||||||||||       ||| | |||||||||||||||| | ||||||||||       |||||||| ||||||||    
T  47879158 tcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtgatattcaaa 47879257  T
Q  367 atcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaac 466  Q
    |||||||||||||  |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  47879258 atcattcaaatttaaaaggattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaac 47879357  T
Q  467 atgagatttcttatgattgnnnnnnncttttaagattttacta 509  Q
    ||||||||||||| |||||       |||||||||||||||||    
T  47879358 atgagatttcttaagattgtttttttcttttaagattttacta 47879400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 160; E-Value: 6e-85
Query Start/End: Original strand, 169 - 509
Target Start/End: Complemental strand, 20275577 - 20275238
Alignment:
Q  169 gtgtatttgatcatgattctaagggattttaaaagannnnnnnnatcatgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnngtt 268  Q
    ||||||| ||||||||||||||||||||||||||||        |||||||  |||||||||||||||||||||||| ||||||||||||       ||     
T  20275577 gtgtattggatcatgattctaagggattttaaaagactttttt-atcatgaataagtcttgtggtattcaatcaagattctttccaatttaaaaaaagtc 20275479  T
Q  269 ttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaat 368  Q
    ||| ||||||||||||| |||| |||||||||       |||||||||||||||||||||| | ||||||||||       ||||  |||||||||||||    
T  20275478 ttgggttattcaatcaagattccttgtcatttaaaaaaagtcttatggtattcaatcaagactcttaatcacttaaaaaaagtcttatggtattcaaaat 20275379  T
Q  369 cattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 468  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||| |||    
T  20275378 cattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtctgtcatgaaagcat 20275279  T
Q  469 gagatttcttatgattgnnnnnnncttttaagattttacta 509  Q
    |||||||||||  ||||       |||||||||||||||||    
T  20275278 gagatttcttagcattgtttttttcttttaagattttacta 20275238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 213 - 485
Target Start/End: Complemental strand, 7719532 - 7719259
Alignment:
Q  213 atcatgataaagtcttgtggtattcaatcaa-gactctttccaatttnnnnnnngttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtct 311  Q
    ||||||| ||| ||||||||||||||||||| |||||||||||||||       || ||||||||||||||||| ||| ||||||||||       ||||    
T  7719532 atcatgaaaaattcttgtggtattcaatcaaagactctttccaatttaaaaaaagtcttgtgttattcaatcaatattatttgtcatttaaaaaaagtct 7719433  T
Q  312 tatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 411  Q
    | |||||||||||||||| | ||||||||||        ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  7719432 tgtggtattcaatcaagactcttaatcacttaaaaaaaatctagtggtattcaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatg 7719333  T
Q  412 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttatgattg 485  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  7719332 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 7719259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 150; E-Value: 6e-79
Query Start/End: Original strand, 168 - 485
Target Start/End: Complemental strand, 32143235 - 32142916
Alignment:
Q  168 ggtgtatttgatcatgattctaagggattttaaaagannnnnnnnatcatgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnngt 267  Q
    |||||||| ||||||||||||||||||||||||||||        ||||||| ||||||||||| |||||||||||||||||||| |||||       ||    
T  32143235 ggtgtattggatcatgattctaagggattttaaaagactttttttatcatgaaaaagtcttgtgatattcaatcaagactctttctaatttaaaaaaagt 32143136  T
Q  268 tttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnn--gtctagtggtattcaa 365  Q
     |||||||||||||| ||  || ||||||||||       ||||||||||||| |||||||| | ||||||||||         |||  |||||||||||    
T  32143135 cttgtgttattcaataaattttttttgtcatttaaaaaaagtcttatggtattgaatcaagactcttaatcacttcaaaaaaaagtcacgtggtattcaa 32143036  T
Q  366 aatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 465  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  32143035 aatcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtcttccataaaaa 32142936  T
Q  466 catgagatttcttatgattg 485  Q
    |||||||||||||| |||||    
T  32142935 catgagatttcttaagattg 32142916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 166 - 509
Target Start/End: Original strand, 34008905 - 34009245
Alignment:
Q  166 ggggtgtatttgatcatgattctaagggattttaaaagannnnnnnnatcatgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnn 265  Q
    |||||||||| ||||||||||||||||||||||||||||        ||||||| |||||||   ||||||||||||||||||||| ||||||           
T  34008905 ggggtgtattggatcatgattctaagggattttaaaagattttttt-atcatgaaaaagtct---ggtattcaatcaagactcttttcaatttaaaaaaa 34009000  T
Q  266 gttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnngtc-tagtggtattca 364  Q
    || ||||||||||||||||| ||| ||||||||||       ||||| |||||||||||||| | | ||||||||||       ||| ||||||||||||    
T  34009001 gtcttgtgttattcaatcaagattatttgtcatttaaaaaaagtcttgtggtattcaatcaacactcttaatcacttaaaaaaagtcctagtggtattca 34009100  T
Q  365 aaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaa 464  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | |||||||||||| ||||||||||||| ||||    
T  34009101 aaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtggaattttctaataaaattttagcataaaaaagtctttcaagaaa 34009200  T
Q  465 acatgagatttcttatgattgnnnnnnncttttaagattttacta 509  Q
    ||||||||||||||| |||||       |||||||||||||||||    
T  34009201 acatgagatttcttaggattgtttttttcttttaagattttacta 34009245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 308 - 485
Target Start/End: Complemental strand, 7718538 - 7718361
Alignment:
Q  308 gtcttatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttt 407  Q
    ||||| |||||||||||||||| | ||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7718538 gtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttt 7718439  T
Q  408 gatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttatgattg 485  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||    
T  7718438 gatggattttgtgggattttctagtgaaattttagcatgaaaaaatctttcatgaaaacatgagatttcttaggattg 7718361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 178 - 485
Target Start/End: Original strand, 7113358 - 7113660
Alignment:
Q  178 atcatgattctaagggattttaaaagannnnnnnnatcatgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnngttttgtgttat 277  Q
    |||||||||||||||||||||||||||        ||||||| ||||| || |||||||||||||||||||||||||||||       || |||||||||    
T  7113358 atcatgattctaagggattttaaaagactttttttatcatgacaaagtatt-tggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttat 7113456  T
Q  278 tcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaat 377  Q
    ||||| || ||| ||| ||||||       || || |||||||||||    | | ||||||||||       ||| ||||||||||||||| ||||||||    
T  7113457 tcaattaagattttttatcatttaaaaaaagttttgtggtattcaat----acttttaatcacttaaaaaaagtccagtggtattcaaaataattcaaat 7113552  T
Q  378 ttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttct 477  Q
    |||| |||||||||||||||||||||||||||| ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||| ||||||    
T  7113553 ttcgcaggattgtttaataaatcagattttgatagattttgtgggattttctaggaaaattttagcatgaaaaagtctttcatgaaaacatgaaatttct 7113652  T
Q  478 tatgattg 485  Q
    || |||||    
T  7113653 taggattg 7113660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 308 - 509
Target Start/End: Complemental strand, 39219552 - 39219352
Alignment:
Q  308 gtcttatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttt 407  Q
    ||||| || ||||||||||||| | ||||||||||       ||||| |||||||||||||||||||||||| || | ||||||||||||||||||||||    
T  39219552 gtcttgtgttattcaatcaagactcttaatcacttaaaaaaagtctattggtattcaaaatcattcaaattttgatg-attgtttaataaatcagatttt 39219454  T
Q  408 gatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttatgattgnnnnnnncttttaagattttac 507  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||       |||||||||||||||    
T  39219453 gatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcataaaaacatgagatttcttaggattgtttttttcttttaagattttac 39219354  T
Q  508 ta 509  Q
    ||    
T  39219353 ta 39219352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 216 - 485
Target Start/End: Original strand, 10068398 - 10068668
Alignment:
Q  216 atgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnngttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttat- 314  Q
    |||| ||||||||||| ||||||||||| ||||||| ||||||       || ||||| |||| |||||| | |||||| |||||       |||||       
T  10068398 atgaaaaagtcttgtgatattcaatcaaaactctttgcaatttaaaaaaagtcttgtggtatttaatcaagactctttgccattttaaaaaagtctttga 10068497  T
Q  315 ggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggat 414  Q
    ||||||||||||||||| || |||||||       |||| ||||||||||||||||||||||||| ||||||||||||||||||| | ||||||||||||    
T  10068498 ggtattcaatcaagatttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattaaattttgatggat 10068597  T
Q  415 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttatgattg 485  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||| ||| |||||    
T  10068598 tttgtgggattttctagtgaaattttagcatgaaaaagtatttcataaaaacatgagatttgttaggattg 10068668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 216 - 478
Target Start/End: Original strand, 23101230 - 23101492
Alignment:
Q  216 atgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnngttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatg 315  Q
    |||| ||||||||||||||||||||||||| | ||| ||||||       || ||||| ||||||||||| | ||||||||||||       |||||  |    
T  23101230 atgaaaaagtcttgtggtattcaatcaagaatttttgcaatttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgag 23101329  T
Q  316 gtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggatt 415  Q
    |||||||||||||| | || |||| ||       |||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  23101330 gtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggatt 23101429  T
Q  416 ttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 478  Q
    |||||||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||    
T  23101430 ttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 23101492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 216 - 478
Target Start/End: Complemental strand, 29615032 - 29614770
Alignment:
Q  216 atgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnngttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatg 315  Q
    |||| ||||||||||||||||||||||||||| ||| ||||||       || ||||| ||||||||||| | ||||||||||||       |||||  |    
T  29615032 atgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgag 29614933  T
Q  316 gtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggatt 415  Q
    |||||||||||||| | || |||| ||       |||| ||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  29614932 gtattcaatcaagacttttcatcatttaaaaaaagtcttgtgatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggatt 29614833  T
Q  416 ttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 478  Q
    |||||||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||    
T  29614832 ttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 29614770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 216 - 478
Target Start/End: Original strand, 28342279 - 28342541
Alignment:
Q  216 atgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnngttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatg 315  Q
    |||| ||||||||||||||||||||||||| | ||| ||||||       || ||||| ||||||||||| | ||||||||||||       |||||  |    
T  28342279 atgaaaaagtcttgtggtattcaatcaagattttttgcaatttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgag 28342378  T
Q  316 gtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggatt 415  Q
    |||||||||| ||| | || |||| ||       |||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  28342379 gtattcaatcgagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggatt 28342478  T
Q  416 ttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 478  Q
    |||||||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||    
T  28342479 ttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 28342541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 216 - 478
Target Start/End: Original strand, 39784031 - 39784293
Alignment:
Q  216 atgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnngttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatg 315  Q
    |||| |||||| |||||||||||||||||||| ||| ||||||       || ||||| ||||||||||| | ||||||||||||       |||||  |    
T  39784031 atgaaaaagtcatgtggtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgag 39784130  T
Q  316 gtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggatt 415  Q
    |||||||||||||| | || |||| ||       |||| |||||||||||||||||| ||||||||||||||||||||||||||  ||||||||||||||    
T  39784131 gtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcatttaaatttcgaaggattgtttaataaattggattttgatggatt 39784230  T
Q  416 ttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 478  Q
    |||||||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||    
T  39784231 ttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 39784293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 216 - 478
Target Start/End: Complemental strand, 9882504 - 9882243
Alignment:
Q  216 atgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnngttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatg 315  Q
    |||| |||||||| |||||||||||||||||| ||| ||||||       |||||||| ||||||||||| | ||||||||||||       |||||  |    
T  9882504 atgaaaaagtcttatggtattcaatcaagactttttgcaatttaaaaaaagttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgag 9882405  T
Q  316 gtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggatt 415  Q
    |||||||||||||| | || |||||||       |||| ||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||    
T  9882404 gtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggatt 9882305  T
Q  416 ttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 478  Q
    |||||||||||| ||||| |||||||  | ||||||||||||||| |||| ||||||||||||    
T  9882304 ttgtgggattttgtagtgtaattttaagaagaaaaagtctttcat-aaaaaatgagatttctt 9882243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 167 - 417
Target Start/End: Original strand, 31638766 - 31639015
Alignment:
Q  167 gggtgtatttgatcatgattctaagggattttaaaagannnnnnnnatcatgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnng 266  Q
    |||||||||  |||||||||||||| ||||||||||||        ||||||| |||||| |||||||||||||||||||||||| ||||||       |    
T  31638766 gggtgtattgaatcatgattctaagagattttaaaagactttttt-atcatgaaaaagtcatgtggtattcaatcaagactcttttcaatttaaaaaaag 31638864  T
Q  267 ttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaa 366  Q
    | ||||||||||||||||||||||||||||||||        |  | |||||||| ||||||| | ||||||||||       |||||||||||||||||    
T  31638865 tcttgtgttattcaatcaaaattctttgtcatttaaaaaaacttgtgtggtattctatcaagactcttaatcacttaaaaaaagtctagtggtattcaaa 31638964  T
Q  367 atcattcaaatttcgaaggattgtttaataaatcagattttgatggatttt 417  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31638965 atcattcaaatttcgaaggattgtttaataaatcagattttgatggatttt 31639015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 221 - 457
Target Start/End: Original strand, 12963638 - 12963874
Alignment:
Q  221 aaagtcttgtggtattcaatcaagactctttccaatttnnnnnnngttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtatt 320  Q
    |||||||||||||| |||||||||||||||| ||| ||       || ||||| ||||||||||| | ||||||||||||       |||||  | ||||    
T  12963638 aaagtcttgtggtactcaatcaagactctttgcaacttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgagatatt 12963737  T
Q  321 caatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtg 420  Q
    ||||||||||| || || ||||       |||| ||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  12963738 caatcaagatttttcattacttaaaaaaagtctcgtggtatccaaaatcattcaaatttcgaaggattgtttaataaattagattttgatggattttgtg 12963837  T
Q  421 ggattttctagtgaaattttagcatgaaaaagtcttt 457  Q
    |||||||||||||||||||||| | ||||||||||||    
T  12963838 ggattttctagtgaaattttagtaagaaaaagtcttt 12963874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 354 - 455
Target Start/End: Original strand, 43679491 - 43679592
Alignment:
Q  354 agtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagt 453  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43679491 agtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagt 43679590  T
Q  454 ct 455  Q
    ||    
T  43679591 ct 43679592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 169 - 466
Target Start/End: Original strand, 727405 - 727692
Alignment:
Q  169 gtgtatttgatcatgattctaagggattttaaaagannnnnnnnatcatgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnngtt 268  Q
    ||||||| |||||||||||||| |||||||||| ||        ||||||| ||||||||| ||||||||||||||||||||| ||||||       ||     
T  727405 gtgtattggatcatgattctaatggattttaaatgactttttt-atcatgaaaaagtcttgcggtattcaatcaagactcttttcaatttaaaaaaagtc 727503  T
Q  269 ttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnng-tctagtggtattcaaaa 367  Q
    ||||||||||||||||||||||||||||||||       ||||| || ||||||||||| | | || |||||||         |||||| ||||||||||    
T  727504 ttgtgttattcaatcaaaattctttgtcatttaaaaaaagtcttgtgatattcaatcaaaactctttatcacttaaaaaaaaatctagtagtattcaaaa 727603  T
Q  368 tcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaac 466  Q
    ||||||||||||| ||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  727604 tcattcaaatttcaaaggattgtttaataaatcagatt----------ttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaac 727692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 269 - 478
Target Start/End: Original strand, 3022911 - 3023120
Alignment:
Q  269 ttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaat 368  Q
    ||||| ||||||||||| | | ||||||||||       |||||  ||||||||||||||||| || |||||||       |||| ||||||||||||||    
T  3022911 ttgtggtattcaatcaagactttttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatcacttaaaaaaagtcttgtggtattcaaaat 3023010  T
Q  369 cattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 468  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || |||||||| ||||||||||| ||    
T  3023011 cattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtttttcatgaaaagat 3023110  T
Q  469 gagatttctt 478  Q
    ||||||||||    
T  3023111 gagatttctt 3023120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 216 - 475
Target Start/End: Original strand, 33382569 - 33382828
Alignment:
Q  216 atgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnngttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatg 315  Q
    |||| |||||||| |||||||||||||||||| ||| ||| ||       |  ||||| ||||||||||| | ||||||||||||       |||||  |    
T  33382569 atgaaaaagtcttatggtattcaatcaagactttttgcaacttaaaaaaagccttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgag 33382668  T
Q  316 gtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggatt 415  Q
    |||||||||||||| | || |||||||       ||||  ||||||||||||||||| ||||||||||||||||||||||||||  ||||||||||||||    
T  33382669 gtattcaatcaagacttttcatcacttaaaaaaagtctcatggtattcaaaatcatttaaatttcgaaggattgtttaataaattggattttgatggatt 33382768  T
Q  416 ttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagattt 475  Q
    |||||||||||| ||||| ||||||| || |||||||||||| ||||||| |||||||||    
T  33382769 ttgtgggattttgtagtgtaattttaacaagaaaaagtcttttatgaaaagatgagattt 33382828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 224 - 478
Target Start/End: Original strand, 18838329 - 18838583
Alignment:
Q  224 gtcttgtggtattcaatcaagactctttccaatttnnnnnnngttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaa 323  Q
    |||||||||||||||||||||||| ||| ||| ||        | ||||| ||||||||||| | ||||||| ||||       |||||  |||||||||    
T  18838329 gtcttgtggtattcaatcaagactttttgcaacttaaaaaaaatattgtggtattcaatcaagactctttgtaattttaaaaaagtcttgaggtattcaa 18838428  T
Q  324 tcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtggga 423  Q
    |||||| | || ||| |||       |||| ||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||||||||    
T  18838429 tcaagacttttcatcgcttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaagattgtttaataaattggattttgatggattttgtggga 18838528  T
Q  424 ttttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 478  Q
    |||| ||||| ||||||| || |||||||| ||||||||||| ||||||||||||    
T  18838529 ttttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttctt 18838583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 216 - 478
Target Start/End: Original strand, 7993074 - 7993336
Alignment:
Q  216 atgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnngttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatg 315  Q
    |||| ||||||||||||||||||||||||||| ||| ||| ||       || | ||| ||||||||||| | |||||| |||||       |||||  |    
T  7993074 atgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtctcgtggtattcaatcaagactctttgccattttaaaaaagtcttgag 7993173  T
Q  316 gtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggatt 415  Q
    |||||||||||| | | || |||||||       ||||  ||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||    
T  7993174 gtattcaatcaaaacttttcatcacttaaaaaaagtcttatggtattcaaaatcattcaaatttcgaaggattgtttaataaattgaattttgatggatt 7993273  T
Q  416 ttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 478  Q
     ||||||||||| ||||| ||||||| || |||||||||||||||||||| || |||||||||    
T  7993274 gtgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagataagatttctt 7993336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 277 - 478
Target Start/End: Original strand, 8675326 - 8675527
Alignment:
Q  277 ttcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaa 376  Q
    ||||||||||| ||||||||||||       |||||  ||||||||||||||| | || |||||||       |||| |||||||||||||||||| |||    
T  8675326 ttcaatcaaaactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcatttaaa 8675425  T
Q  377 tttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttc 476  Q
     ||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || |||||| ||||| ||||||| ||||||||||    
T  8675426 cttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaaatcttttatgaaaagatgagatttc 8675525  T
Q  477 tt 478  Q
    ||    
T  8675526 tt 8675527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 269 - 485
Target Start/End: Original strand, 12740358 - 12740573
Alignment:
Q  269 ttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaat 368  Q
    ||||| ||||||||||| ||||||||||||||       |||||  |||||| |||||||||| || |||| ||       |||| ||||||||||||||    
T  12740358 ttgtggtattcaatcaagattctttgtcatttttaaaaagtcttgaggtatttaatcaagatttttcatcatttaaaaaaagtctcgtggtattcaaaat 12740457  T
Q  369 cattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 468  Q
    |||||||||||| ||||||||||||||||||  ||||||||| |||||||||||||||| ||||| ||||||| || || |||||||||||| |||| ||    
T  12740458 cattcaaatttcaaaggattgtttaataaatg-gattttgatagattttgtgggattttatagtgtaattttaacaagagaaagtctttcataaaaagat 12740556  T
Q  469 gagatttcttatgattg 485  Q
    ||||||||||| |||||    
T  12740557 gagatttcttaagattg 12740573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 350 - 478
Target Start/End: Complemental strand, 28034939 - 28034811
Alignment:
Q  350 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 449  Q
    |||| |||||||||||||| ||||||||||| ||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| ||  |||    
T  28034939 gtcttgtggtattcaaaattattcaaatttcaaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaaaaaa 28034840  T
Q  450 aagtctttcatgaaaacatgagatttctt 478  Q
    |||||||||||||||| ||||||||||||    
T  28034839 aagtctttcatgaaaagatgagatttctt 28034811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 356 - 475
Target Start/End: Complemental strand, 43187485 - 43187366
Alignment:
Q  356 tggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtct 455  Q
    |||||||||||||||||||||||| |||| ||||||||||||||  |||||||||| ||||||| ||||||||||||||||||||| || ||||||||||    
T  43187485 tggtattcaaaatcattcaaattttgaagcattgtttaataaattggattttgatgaattttgtcggattttctagtgaaattttaacaagaaaaagtct 43187386  T
Q  456 ttcatgaaaacatgagattt 475  Q
    |||||||| |||||||||||    
T  43187385 ttcatgaagacatgagattt 43187366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 221 - 478
Target Start/End: Original strand, 19251476 - 19251723
Alignment:
Q  221 aaagtcttgtggtattcaatcaagactctttccaatttnnnnnnngttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtatt 320  Q
    |||||||||| |||||||||||||||||||| ||| ||       || ||||| ||||||||||| | ||||||||||||       |||||  ||||||    
T  19251476 aaagtcttgtagtattcaatcaagactctttgcaacttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtatt 19251575  T
Q  321 caatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtg 420  Q
    ||||||| ||| || |||||||       |||| |||||||||||||||||||||||||||||||||||||||||||||          |||||||||      
T  19251576 caatcaaaatttttcatcacttaaaaaaagtctcgtggtattcaaaatcattcaaatttcgaaggattgtttaataaat----------tggattttgat 19251665  T
Q  421 ggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 478  Q
    ||||||||| ||||||||||||||  |||||||||||||||||||| ||| |||||||    
T  19251666 ggattttcttgtgaaattttagcaataaaaagtctttcatgaaaacctgaaatttctt 19251723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 275 - 485
Target Start/End: Original strand, 9179871 - 9180071
Alignment:
Q  275 tattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattca 374  Q
    ||||||||||| ||||||||||||||       || || | |||||||||||||| | || |||||||       |||| ||||||| |||||||| | |    
T  9179871 tattcaatcaagattctttgtcatttaaaaaaagttttgtcgtattcaatcaagactcttcatcacttaaaaaaagtcttgtggtatacaaaatcactta 9179970  T
Q  375 aatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatt 474  Q
    |||| ||||||||||||||||||||          |||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||    
T  9179971 aattccgaaggattgtttaataaat----------tggattttgtgggattttctagtgaatttttagcataaaaaagtctttcatgaaaacatgagatt 9180060  T
Q  475 tcttatgattg 485  Q
    ||||| |||||    
T  9180061 tcttaggattg 9180071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 231 - 485
Target Start/End: Complemental strand, 3797310 - 3797066
Alignment:
Q  231 ggtattcaatcaagactctttccaatttnnnnnnngttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagat 330  Q
    ||||||||||||||||||||| ||||||       ||  | || ||||||||||| | ||||||||||||       |||||  |||||||||||||||     
T  3797310 ggtattcaatcaagactctttgcaatttaaaaaaagtcatctgatattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagac 3797211  T
Q  331 tattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttcta 430  Q
    | || |||||||       |||| ||||||||||| |||||| |||||| ||||||||||||||||||| |||||||||         ||||||||||||    
T  3797210 ttttcatcacttaaaaaaagtcttgtggtattcaagatcattaaaattttgaaggattgtttaataaattagattttga---------tgggattttcta 3797120  T
Q  431 gtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttatgattg 485  Q
    ||||||||||||||||||||||||||| | |||||||| |||||||||| |||||    
T  3797119 gtgaaattttagcatgaaaaagtcttttaagaaaacat-agatttcttaggattg 3797066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 355 - 454
Target Start/End: Original strand, 25805763 - 25805862
Alignment:
Q  355 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 454  Q
    ||||||||||||||||||||||||||| |||||||||||||||||   ||| |||||||||||||||||||||||| | |||||||||||||||||||||    
T  25805763 gtggtattcaaaatcattcaaatttcgtaggattgtttaataaattgaattatgatggattttgtgggattttctaataaaattttagcatgaaaaagtc 25805862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 370 - 478
Target Start/End: Complemental strand, 37972981 - 37972873
Alignment:
Q  370 attcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatg 469  Q
    ||||||||||||||||||| ||||||||||  ||||||||||||||||| |||||||| ||||| ||||||| || |||||||||||||||||||| |||    
T  37972981 attcaaatttcgaaggattatttaataaattggattttgatggattttgcgggattttatagtgtaattttaacaagaaaaagtctttcatgaaaagatg 37972882  T
Q  470 agatttctt 478  Q
    ||| |||||    
T  37972881 agacttctt 37972873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 309 - 475
Target Start/End: Complemental strand, 44256941 - 44256775
Alignment:
Q  309 tcttatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg 408  Q
    ||||| ||||||||||||||| | || |||||||       || | ||||||||||||||||||||||||||||| |||||||||||||||  ||||| |    
T  44256941 tcttaaggtattcaatcaagacttttcatcacttaaaaaaagtatcgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggatttgg 44256842  T
Q  409 atggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagattt 475  Q
    ||| ||||||| |||||||  |||| ||||||| || |||||||| |||||| |||| |||||||||    
T  44256841 atgaattttgttggattttgcagtgtaattttaacaagaaaaagtttttcatcaaaatatgagattt 44256775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 359 - 478
Target Start/End: Original strand, 19810874 - 19810983
Alignment:
Q  359 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttc 458  Q
    |||||||||||||||||||||| || |||||||||||||||          |||||||||||| ||||||||||||||||||||||| |||| |||||||    
T  19810874 tattcaaaatcattcaaatttcaaatgattgtttaataaat----------tggattttgtggaattttctagtgaaattttagcataaaaatgtctttc 19810963  T
Q  459 atgaaaacatgagatttctt 478  Q
    ||||||||||||||||||||    
T  19810964 atgaaaacatgagatttctt 19810983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 216 - 419
Target Start/End: Original strand, 37327859 - 37328062
Alignment:
Q  216 atgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnngttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatg 315  Q
    |||| ||||||||||||||||||||||||||| ||| ||| ||       || ||||| ||||||||||| | ||||||||||||       |||||  |    
T  37327859 atgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgag 37327958  T
Q  316 gtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggatt 415  Q
    |||||||||||||| | || || ||||       |||| |||||||||||||||||||||||||| ||||||||||||||||||   |||||||||||||    
T  37327959 gtattcaatcaagacttttcattacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcaaaggattgtttaataaattgaattttgatggatt 37328058  T
Q  416 ttgt 419  Q
    ||||    
T  37328059 ttgt 37328062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 216 - 478
Target Start/End: Complemental strand, 40460975 - 40460723
Alignment:
Q  216 atgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnngttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatg 315  Q
    |||| ||||| |||||||||| |||||||||| ||| ||||||       || ||||| |||||||| || | ||||||||||||       |||||  |    
T  40460975 atgaaaaagttttgtggtatttaatcaagactttttgcaatttaaaaaatgtcttgtgatattcaattaagactctttgtcattttaaaaaagtcttgag 40460876  T
Q  316 gtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggatt 415  Q
     ||||||||||||| | || |||||||       |||| ||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||    
T  40460875 atattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggatt 40460776  T
Q  416 ttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 478  Q
    |||          ||||| ||||||| || |||||| ||||||||||||| ||||||||||||    
T  40460775 ttg----------tagtgtaattttaacaagaaaaaatctttcatgaaaatatgagatttctt 40460723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 370 - 478
Target Start/End: Original strand, 41827390 - 41827498
Alignment:
Q  370 attcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatg 469  Q
    ||||||| || |||||||||||||||||||  |||||||||||||||||||||||| | ||||| ||||||| || ||||| |||||||||||||| |||    
T  41827390 attcaaaatttgaaggattgtttaataaattggattttgatggattttgtgggattgtgtagtgtaattttaacaagaaaatgtctttcatgaaaatatg 41827489  T
Q  470 agatttctt 478  Q
    |||||||||    
T  41827490 agatttctt 41827498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 268 - 475
Target Start/End: Complemental strand, 44122116 - 44121919
Alignment:
Q  268 tttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaa 367  Q
    |||||| ||||||||||| | ||||||||||||       |||||  ||||||||||||||| | || |||||||        ||| |||||||||||||    
T  44122116 tttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaaatcttgtggtattcaaaa 44122017  T
Q  368 tcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaaca 467  Q
    ||||||||||||||||||||||||||||||||  |||||||||||||||||          ||||| ||||||| || |||||||||||| ||||||| |    
T  44122016 tcattcaaatttcgaaggattgtttaataaattggattttgatggattttg----------tagtgtaattttaacaagaaaaagtctttaatgaaaaga 44121927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 166 - 300
Target Start/End: Original strand, 8078285 - 8078418
Alignment:
Q  166 ggggtgtatttgatcatgattctaagggattttaaaagannnnnnnnatcatgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnn 265  Q
    |||||||||| ||||||||||||||||||||||||||||        ||||| | ||||||||||||||||||||||||||||||||||||||           
T  8078285 ggggtgtattggatcatgattctaagggattttaaaagactttttt-atcataaaaaagtcttgtggtattcaatcaagactctttccaattttaaaaaa 8078383  T
Q  266 gttttgtgttattcaatcaaaattctttgtcattt 300  Q
      |||||||||||||||||| ||||||||||||||    
T  8078384 aatttgtgttattcaatcaagattctttgtcattt 8078418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 308 - 441
Target Start/End: Complemental strand, 10676596 - 10676463
Alignment:
Q  308 gtcttatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttt 407  Q
    ||||| |||||||||||||||| | || |||||||       ||||  | ||||||||||||||||||||||||||||||||||||||||||  |||||     
T  10676596 gtcttgtggtattcaatcaagacttttcatcacttaaaaaaagtctcattgtattcaaaatcattcaaatttcgaaggattgtttaataaattggatttg 10676497  T
Q  408 gatggattttgtgggattttctagtgaaatttta 441  Q
    |||||||||| ||| ||||||| |||||||||||    
T  10676496 gatggattttatggaattttcttgtgaaatttta 10676463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 350 - 450
Target Start/End: Original strand, 32883848 - 32883948
Alignment:
Q  350 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 449  Q
    |||| ||||||||||||||||||||||||||||| ||||||||| |||||  ||||||||||||||| |||||||||| ||||| ||||||| || ||||    
T  32883848 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttattaaattggattttgatggatttcgtgggattttgtagtgtaattttaacaagaaa 32883947  T
Q  450 a 450  Q
    |    
T  32883948 a 32883948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 350 - 478
Target Start/End: Original strand, 509722 - 509840
Alignment:
Q  350 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 449  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||          |||||  |||||| || ||||    
T  509722 gtcttgtggtattcaaaatcattcaaatttcgaacgattgtttaataaattggattttgatggattttg----------tagtgggattttaacaagaaa 509811  T
Q  450 aagtctttcatgaaaacatgagatttctt 478  Q
    |||||||||||||||| ||||||||||||    
T  509812 aagtctttcatgaaaagatgagatttctt 509840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 165 - 258
Target Start/End: Original strand, 43679358 - 43679451
Alignment:
Q  165 aggggtgtatttgatcatgattctaagggattttaaaagannnnnnnnatcatgataaagtcttgtggtattcaatcaagactctttccaattt 258  Q
    |||| |||||| ||||||||||||||||||||||||||||        ||||||| ||||||||||||||||||||||||||||||||||||||    
T  43679358 agggatgtattggatcatgattctaagggattttaaaagattttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaattt 43679451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 216 - 421
Target Start/End: Complemental strand, 46405699 - 46405494
Alignment:
Q  216 atgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnngttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatg 315  Q
    |||| |||||| |||||||||||||||||||| ||| ||| ||        | ||| | ||||||||||| | |||||||| |||       |||||  |    
T  46405699 atgaaaaagtcatgtggtattcaatcaagactttttgcaacttaaaaaaaatcttgcggtattcaatcaagactctttgtcgttttaaaaaagtcttgag 46405600  T
Q  316 gtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggatt 415  Q
    |||||||||||||| | || |||||||       |||| |||||||||||||||||||||||||| || |||||||||||||||  ||||||||||||||    
T  46405599 gtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcaaatgattgtttaataaattggattttgatggatt 46405500  T
Q  416 ttgtgg 421  Q
    ||||||    
T  46405499 ttgtgg 46405494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 216 - 408
Target Start/End: Complemental strand, 17001291 - 17001099
Alignment:
Q  216 atgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnngttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatg 315  Q
    |||| ||||||||||||||||||||||||||| ||| ||| ||       || ||||| ||||||||||| | ||||||||||||       |||||  |    
T  17001291 atgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagactctttgtcatttttaaaaagtcttgag 17001192  T
Q  316 gtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg 408  Q
    ||||||||| |||| | || |||||||        | | |||||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  17001191 gtattcaataaagacttttcatcacttaaaaaaaatatcgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 17001099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 216 - 419
Target Start/End: Original strand, 39028029 - 39028232
Alignment:
Q  216 atgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnngttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatg 315  Q
    |||| ||||||||||||||||||||||||||| ||| ||| ||        | ||||| ||||||||||| | ||||||||||||       |||||  |    
T  39028029 atgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaaaatcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgag 39028128  T
Q  316 gtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggatt 415  Q
     ||||||||||||| | || |||||||       |||| ||| ||||||||||| |||||||| |||| |||||||||||||||  ||||||||||||||    
T  39028129 atattcaatcaagacttttcatcacttaaaaaaagtcttgtgttattcaaaatcgttcaaattacgaaagattgtttaataaattggattttgatggatt 39028228  T
Q  416 ttgt 419  Q
    ||||    
T  39028229 ttgt 39028232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 355 - 466
Target Start/End: Complemental strand, 1470362 - 1470252
Alignment:
Q  355 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 454  Q
    ||||||||||||||| |||||||||  ||| |||||||||| ||| |||||||||| | ||||||||||||||||  | |||||||||||||||||| ||    
T  1470362 gtggtattcaaaatcgttcaaattttaaagcattgtttaatgaattagattttgatag-ttttgtgggattttctgataaaattttagcatgaaaaaatc 1470264  T
Q  455 tttcatgaaaac 466  Q
    |||  |||||||    
T  1470263 ttttttgaaaac 1470252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 266 - 478
Target Start/End: Original strand, 29585497 - 29585698
Alignment:
Q  266 gttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaa 365  Q
    |||||||| ||||||||||| ||||||||||||||       |||||  ||||||||||||| | | ||| ||||||       ||||  ||||||||||    
T  29585497 gttttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaaaactttta-tcacttaaaaaaagtcttctggtattcaa 29585595  T
Q  366 aatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 465  Q
    |||||||||||||| ||||||||||||||||| |  ||||||||||||||||||          |||| ||||||| || ||||||||||||||| ||||    
T  29585596 aatcattcaaattttgaaggattgtttaataatttggattttgatggattttgt----------agtgtaattttaacaagaaaaagtctttcataaaaa 29585685  T
Q  466 catgagatttctt 478  Q
     |||| |||||||    
T  29585686 gatgaaatttctt 29585698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 275 - 475
Target Start/End: Complemental strand, 33892459 - 33892269
Alignment:
Q  275 tattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattca 374  Q
    ||||||||||| | ||||||||||||       |||||  ||||||||||||||| | || |||||||       |||| ||||||||||||||||||||    
T  33892459 tattcaatcaacactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaacaaagtcttgtggtattcaaaatcattca 33892360  T
Q  375 aatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatt 474  Q
    ||||||||| ||||||| |||||||  |||||| ||| ||||||          ||||| ||||||| || ||||||||||||||| |||| ||||||||    
T  33892359 aatttcgaatgattgttaaataaattggatttttatgaattttg----------tagtgtaattttaacaagaaaaagtctttcattaaaagatgagatt 33892270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 166 - 258
Target Start/End: Original strand, 34695121 - 34695212
Alignment:
Q  166 ggggtgtatttgatcatgattctaagggattttaaaagannnnnnnnatcatgataaagtcttgtggtattcaatcaagactctttccaattt 258  Q
    ||||||||||  |||||||||||||||||||||||||||        || |||| ||||||||||||||||||||||||||||||||||||||    
T  34695121 ggggtgtattgaatcatgattctaagggattttaaaagactttttt-attatgaaaaagtcttgtggtattcaatcaagactctttccaattt 34695212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 390 - 468
Target Start/End: Original strand, 10617024 - 10617102
Alignment:
Q  390 tttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 468  Q
    |||||||||| |||||||||||||||||||| ||||||||||||| ||||||| |  || ||||||||||| |||||||    
T  10617024 tttaataaattagattttgatggattttgtgagattttctagtgatattttagtaataacaagtctttcataaaaacat 10617102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 167 - 258
Target Start/End: Complemental strand, 39219651 - 39219561
Alignment:
Q  167 gggtgtatttgatcatgattctaagggattttaaaagannnnnnnnatcatgataaagtcttgtggtattcaatcaagactctttccaattt 258  Q
    ||||||||| |||||| ||||||||| |||||||||||        ||||||| ||||||||||||||||||||||||||||||||||||||    
T  39219651 gggtgtattggatcataattctaaggaattttaaaagactttttt-atcatgaaaaagtcttgtggtattcaatcaagactctttccaattt 39219561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 268 - 475
Target Start/End: Complemental strand, 44623492 - 44623295
Alignment:
Q  268 tttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaa 367  Q
    |||||| ||||||||||| | ||||||||||||       ||||| ||||||| |||||||| | || |||||||       |||| ||| |||||||||    
T  44623492 tttgtgatattcaatcaagactctttgtcatttaaaaaaagtcttgtggtatttaatcaagactcttcatcactttaaaaaggtctcgtgatattcaaaa 44623393  T
Q  368 tcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaaca 467  Q
    ||||||| ||||| || || ||||||||||||          || ||||||||| |||||||||||||||||||| |||||||||||| |||| |||| |    
T  44623392 tcattcatatttctaaagactgtttaataaat----------tgaattttgtggaattttctagtgaaattttagaatgaaaaagtctctcataaaaata 44623303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 350 - 408
Target Start/End: Original strand, 47066770 - 47066828
Alignment:
Q  350 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg 408  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  47066770 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 47066828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 355 - 414
Target Start/End: Original strand, 447854 - 447913
Alignment:
Q  355 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggat 414  Q
    |||||||| |||||||||||||||||||| ||||||||||| |||  |||||||||||||    
T  447854 gtggtatttaaaatcattcaaatttcgaatgattgtttaattaattggattttgatggat 447913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 251
Target Start/End: Original strand, 29893055 - 29893090
Alignment:
Q  216 atgataaagtcttgtggtattcaatcaagactcttt 251  Q
    |||| |||||||||||||||||||||||||||||||    
T  29893055 atgaaaaagtcttgtggtattcaatcaagactcttt 29893090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 221 - 251
Target Start/End: Complemental strand, 48117814 - 48117784
Alignment:
Q  221 aaagtcttgtggtattcaatcaagactcttt 251  Q
    |||||||||||||||||||||||||||||||    
T  48117814 aaagtcttgtggtattcaatcaagactcttt 48117784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 250
Target Start/End: Complemental strand, 7718541 - 7718512
Alignment:
Q  221 aaagtcttgtggtattcaatcaagactctt 250  Q
    ||||||||||||||||||||||||||||||    
T  7718541 aaagtcttgtggtattcaatcaagactctt 7718512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 446 - 478
Target Start/End: Complemental strand, 17001081 - 17001049
Alignment:
Q  446 gaaaaagtctttcatgaaaacatgagatttctt 478  Q
    |||||||||||||||||||| ||||||||||||    
T  17001081 gaaaaagtctttcatgaaaatatgagatttctt 17001049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 223 - 251
Target Start/End: Complemental strand, 43187604 - 43187576
Alignment:
Q  223 agtcttgtggtattcaatcaagactcttt 251  Q
    |||||||||||||||||||||||||||||    
T  43187604 agtcttgtggtattcaatcaagactcttt 43187576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 192; Significance: 1e-104; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 166 - 509
Target Start/End: Complemental strand, 6197795 - 6197453
Alignment:
Q  166 ggggtgtatttgatcatgattctaagggattttaaaagannnnnnnnatcatgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnn 265  Q
    |||||||||| |||||||||||||||||||||||||| |        ||||||| |||||| |||||||||||||||||||||||||||||||           
T  6197795 ggggtgtattggatcatgattctaagggattttaaaa-aacttttttatcatgaaaaagtcgtgtggtattcaatcaagactctttccaatttaaaaaaa 6197697  T
Q  266 gttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaa 365  Q
    || ||||||||||||||||| ||||||||||||||       ||||| |||||||||||||||| | ||||||||||       ||||||||||||||||    
T  6197696 gtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaa 6197597  T
Q  366 aatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 465  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6197596 aatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 6197497  T
Q  466 catgagatttcttatgattgnnnnnnncttttaagattttacta 509  Q
    |||||||||||||| |||||       |||||||||||||||||    
T  6197496 catgagatttcttaggattgtttttttcttttaagattttacta 6197453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 175; E-Value: 7e-94
Query Start/End: Original strand, 166 - 484
Target Start/End: Complemental strand, 2301055 - 2300738
Alignment:
Q  166 ggggtgtatttgatcatgattctaagggattttaaaagannnnnnnnatcatgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnn 265  Q
    |||||||||| ||||||||||||||||||||||||||||        ||||||| ||||||||||||||||||||||||||||||| ||||||           
T  2301055 ggggtgtattggatcatgattctaagggattttaaaagactttttt-atcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttaaaaaaa 2300957  T
Q  266 gttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaa 365  Q
    || ||||||||||||||||| ||||||||||||||       ||||| |||||||||||||||| | || |||||||       ||||| ||||||| ||    
T  2300956 gtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttgatcacttaaaaaaagtctactggtattgaa 2300857  T
Q  366 aatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 465  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2300856 aatcattcaaatttcgaaggattgtttaataaataagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 2300757  T
Q  466 catgagatttcttatgatt 484  Q
    |||||||||||||| ||||    
T  2300756 catgagatttcttaggatt 2300738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 171; E-Value: 2e-91
Query Start/End: Original strand, 167 - 485
Target Start/End: Original strand, 1391513 - 1391830
Alignment:
Q  167 gggtgtatttgatcatgattctaagggattttaaaagannnnnnnnatcatgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnng 266  Q
    ||||||||| |||||||||||||| |||||||||| ||        ||||||| ||||||||||||||||||||||||||||||||||||||       |    
T  1391513 gggtgtattggatcatgattctaaaggattttaaatgactttttt-atcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaag 1391611  T
Q  267 ttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaa 366  Q
    | ||||||||||||||||| |||| |||||||||       ||||| |||||||||||||||| | ||||||||||       |||||||||||||||||    
T  1391612 tcttgtgttattcaatcaagattcattgtcatttaaataaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaa 1391711  T
Q  367 atcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaac 466  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  1391712 atcattcaaatttggaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttggcatgaaaaagtctttcatgaaaac 1391811  T
Q  467 atgagatttcttatgattg 485  Q
    |||||||| |||| |||||    
T  1391812 atgagattccttaggattg 1391830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 162; E-Value: 4e-86
Query Start/End: Original strand, 166 - 485
Target Start/End: Original strand, 29076485 - 29076805
Alignment:
Q  166 ggggtgtatttgatcatgattctaagggattttaaaagannnnnnnnatcatgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnn 265  Q
    |||||||||| ||||||||||||||| ||||||||||||        ||||||| ||||||||||| ||||||||||||||||||||||||||           
T  29076485 ggggtgtattggatcatgattctaagagattttaaaagactttttttatcatgaaaaagtcttgtgatattcaatcaagactctttccaatttaaataaa 29076584  T
Q  266 gttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnn-gtctagtggtattca 364  Q
    || ||||||||||||||||| ||||||||||||||       ||||| |||||||||||| ||||| ||||||||||        ||||||| |||||||    
T  29076585 gtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatctagattcttaatcacttaaaaaaaagtctagtagtattca 29076684  T
Q  365 aaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaa 464  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| |||||||| |||    
T  29076685 aaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttataggattttctagtgaaattttagcatgaaaaaatctttcataaaa 29076784  T
Q  465 acatgagatttcttatgattg 485  Q
    ||||||||||| ||| |||||    
T  29076785 acatgagattttttaggattg 29076805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 160; E-Value: 6e-85
Query Start/End: Original strand, 166 - 485
Target Start/End: Original strand, 29111458 - 29111779
Alignment:
Q  166 ggggtgtatttgatcatgattctaagggattttaaaagannnnnnnnatcatgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnn 265  Q
    |||||||||| ||||||||||||||| ||||||||||||        ||||||| ||||||||||| ||||||||||||||||||||||||||           
T  29111458 ggggtgtattggatcatgattctaagagattttaaaagactttttttatcatgaaaaagtcttgtgatattcaatcaagactctttccaatttaaataaa 29111557  T
Q  266 gttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnn--gtctagtggtattc 363  Q
    || ||||||||||||||||| ||||||||||||||       ||||| |||||||||||| ||||| ||||||||||         ||||||| ||||||    
T  29111558 gtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatctagattcttaatcacttaaaaaaaaagtctagtagtattc 29111657  T
Q  364 aaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaa 463  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| |||||||| ||    
T  29111658 aaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttataggattttctagtgaaattttagcatgaaaaaatctttcataaa 29111757  T
Q  464 aacatgagatttcttatgattg 485  Q
    |||||||||||| ||| |||||    
T  29111758 aacatgagattttttaggattg 29111779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 138; E-Value: 8e-72
Query Start/End: Original strand, 216 - 509
Target Start/End: Original strand, 28002602 - 28002895
Alignment:
Q  216 atgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnngttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatg 315  Q
    |||| ||| |||||| |||||||||||||||||||||||||||       || |||| |||||||||||| ||| ||||||||||       ||||| ||    
T  28002602 atgaaaaaatcttgtcgtattcaatcaagactctttccaatttaaaaaaagtcttgtcttattcaatcaagattttttgtcatttaaaaaaagtcttctg 28002701  T
Q  316 gtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggatt 415  Q
    |||||||||||||| | ||||||||||       |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  28002702 gtattcaatcaagactcttaatcacttaaaaaaagtctagtgatattcaaaatcattcaaatttggaaggattgtttaataaatcagattttgatggatt 28002801  T
Q  416 ttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttatgattgnnnnnnncttttaagattttacta 509  Q
    |||||  ||||||||||||||||||||||||||||||||||||||||||||||||   |||||| |||||       |||||||||||||||||    
T  28002802 ttgtgaaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaagcttcttaggattgtttttttcttttaagattttacta 28002895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 216 - 478
Target Start/End: Original strand, 31895633 - 31895895
Alignment:
Q  216 atgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnngttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatg 315  Q
    |||| ||||||||||||||||||||||||||| ||| ||||||       || ||||| ||||||||||| | ||||||||||||       |||||       
T  31895633 atgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaa 31895732  T
Q  316 gtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggatt 415  Q
    |||||||||||||| | || |||| ||       |||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  31895733 gtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggatt 31895832  T
Q  416 ttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 478  Q
    |||||||||||||||||| ||||||| || |||||||||||||||||||| ||||||||||||    
T  31895833 ttgtgggattttctagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 31895895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 166 - 479
Target Start/End: Original strand, 7051733 - 7052045
Alignment:
Q  166 ggggtgtatttgatcatgattctaagggattttaaaagannnnnnnnatcatgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnn 265  Q
    ||||||| |||||| | ||||||||| ||||||||||||        ||||||| ||||||||||| ||||||||||||||||||| ||| ||           
T  7051733 ggggtgtgtttgattaggattctaagagattttaaaagactttttt-atcatgaaaaagtcttgtgatattcaatcaagactctttgcaacttaaaaaaa 7051831  T
Q  266 gttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaa 365  Q
    || ||||| ||| | ||||| ||||||||||||||       ||||| |||||| ||||||||| | || |||||||       |||  ||| |||||||    
T  7051832 gtcttgtggtatacgatcaagattctttgtcatttaaaaaaagtcttgtggtatacaatcaagactcttcatcacttaaaaaaagtcgtgtgatattcaa 7051931  T
Q  366 aatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 465  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||| |||||||||||| |||||||||||||||||||| |||||| |||     
T  7051932 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtaggattttctagtaaaattttagcatgaaaaagtttttcataaaat 7052031  T
Q  466 catgagatttctta 479  Q
    ||||||||||||||    
T  7052032 catgagatttctta 7052045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 216 - 478
Target Start/End: Original strand, 34773346 - 34773608
Alignment:
Q  216 atgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnngttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatg 315  Q
    |||| ||||||||||||||||||||||||||| ||| ||||||       || ||||| ||||||||||| | ||||||||||||       |||||  |    
T  34773346 atgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgag 34773445  T
Q  316 gtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggatt 415  Q
    |||||||||||||| | || |||| ||        ||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  34773446 gtattcaatcaagacttttcatcatttaaaaaaaatcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggatt 34773545  T
Q  416 ttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 478  Q
    ||||||||||||  |||| ||||||| || |||||||||||||||||||| ||||||||||||    
T  34773546 ttgtgggattttgcagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 34773608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 216 - 478
Target Start/End: Complemental strand, 14262701 - 14262439
Alignment:
Q  216 atgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnngttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatg 315  Q
    |||| ||| ||||||||||||||||||||| | ||| ||| ||       || ||||| ||||||||||| | ||||||||||||       |||||  |    
T  14262701 atgaaaaaatcttgtggtattcaatcaagattttttgcaacttaaaaaaagtcttgtggtattcaatcaagactctttgtcatttttaaaaagtcttgag 14262602  T
Q  316 gtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggatt 415  Q
    |||||||||||||||| || |||| ||       |||| |||||||||||||||||| ||||||||||||||||||||||||||  ||||||||||||||    
T  14262601 gtattcaatcaagatttttcatcatttaaaaaaagtcttgtggtattcaaaatcatttaaatttcgaaggattgtttaataaattggattttgatggatt 14262502  T
Q  416 ttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 478  Q
    |||||||||||| ||||| ||||||| || |||||||||||||||||||| ||| ||||||||    
T  14262501 ttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgggatttctt 14262439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 308 - 478
Target Start/End: Original strand, 7497105 - 7497274
Alignment:
Q  308 gtcttatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttt 407  Q
    ||||| |||||||||||||||||| || |||||||       |||| |||||||||||||||||||||||||||||||| ||||||||||||  ||||||    
T  7497105 gtcttgtggtattcaatcaagatttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggagtgtttaataaattggatttt 7497204  T
Q  408 gatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 478  Q
    |||||||||||| ||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||    
T  7497205 gatggattttgt-ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 7497274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 316 - 478
Target Start/End: Complemental strand, 34759218 - 34759056
Alignment:
Q  316 gtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggatt 415  Q
    |||||||||||||| | || |||||||       |||| |||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||||    
T  34759218 gtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttccaaggattgtttaataaattggattttgatggatt 34759119  T
Q  416 ttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 478  Q
    |||||||||||| ||||| ||||||| || |||||| ||||||||||||| ||||||||||||    
T  34759118 ttgtgggattttgtagtgtaattttaacaagaaaaaatctttcatgaaaagatgagatttctt 34759056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 355 - 478
Target Start/End: Original strand, 31067569 - 31067682
Alignment:
Q  355 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 454  Q
    |||||||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||| ||||| ||||||| || |||||||||    
T  31067569 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtc 31067658  T
Q  455 tttcatgaaaacatgagatttctt 478  Q
    |||||| |||| ||||||||||||    
T  31067659 tttcataaaaagatgagatttctt 31067682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 350 - 478
Target Start/End: Complemental strand, 30385191 - 30385075
Alignment:
Q  350 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 449  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||| ||||| ||||||| ||  | |    
T  30385191 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaaca--aca 30385104  T
Q  450 aagtctttcatgaaaacatgagatttctt 478  Q
    |||||||||||||||| ||||||||||||    
T  30385103 aagtctttcatgaaaagatgagatttctt 30385075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 370 - 478
Target Start/End: Complemental strand, 4200541 - 4200443
Alignment:
Q  370 attcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatg 469  Q
    ||||||||||||||||||||||||||||||  |||||||||||||||||          ||||| ||||||| || |||||||||||||||||||| |||    
T  4200541 attcaaatttcgaaggattgtttaataaattggattttgatggattttg----------tagtgtaattttaacaagaaaaagtctttcatgaaaagatg 4200452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 270 - 450
Target Start/End: Original strand, 656957 - 657122
Alignment:
Q  270 tgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatc 369  Q
    |||||||||||||||| |||||||| |||||       ||||| |||||||||||||||| | ||||||||||       |||||||||||||| |||||    
T  656957 tgtgttattcaatcaagattctttg-catttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattctaaatc 657055  T
Q  370 attcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaa 450  Q
    |||||||||           ||||||||||| |||| |||||||||||||||||||   ||||||||||||| ||||||||    
T  657056 attcaaatt-----------tttaataaatctgattctgatggattttgtgggatt---tagtgaaattttatcatgaaaa 657122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 436 - 485
Target Start/End: Original strand, 2238668 - 2238717
Alignment:
Q  436 attttagcatgaaaaagtctttcatgaaaacatgagatttcttatgattg 485  Q
    ||||||| |||||||| ||||||||||||||||||||||||||| |||||    
T  2238668 attttagtatgaaaaaatctttcatgaaaacatgagatttcttaagattg 2238717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 355 - 399
Target Start/End: Original strand, 3848286 - 3848330
Alignment:
Q  355 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaat 399  Q
    |||||||||||||||||| |||||| ||| |||||||||||||||    
T  3848286 gtggtattcaaaatcatttaaattttgaatgattgtttaataaat 3848330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 444 - 484
Target Start/End: Complemental strand, 11113773 - 11113733
Alignment:
Q  444 atgaaaaagtctttcatgaaaacatgagatttcttatgatt 484  Q
    ||||||| |||||||||||||||||||||||||||| ||||    
T  11113773 atgaaaacgtctttcatgaaaacatgagatttcttaggatt 11113733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 221 - 251
Target Start/End: Complemental strand, 30385278 - 30385248
Alignment:
Q  221 aaagtcttgtggtattcaatcaagactcttt 251  Q
    |||||||||||||||||||||||||||||||    
T  30385278 aaagtcttgtggtattcaatcaagactcttt 30385248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 221 - 251
Target Start/End: Complemental strand, 34759272 - 34759242
Alignment:
Q  221 aaagtcttgtggtattcaatcaagactcttt 251  Q
    |||||||||||||||||||||||||||||||    
T  34759272 aaagtcttgtggtattcaatcaagactcttt 34759242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 250
Target Start/End: Original strand, 656991 - 657020
Alignment:
Q  221 aaagtcttgtggtattcaatcaagactctt 250  Q
    ||||||||||||||||||||||||||||||    
T  656991 aaagtcttgtggtattcaatcaagactctt 657020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 192; Significance: 1e-104; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 166 - 485
Target Start/End: Original strand, 21146956 - 21147274
Alignment:
Q  166 ggggtgtatttgatcatgattctaagggattttaaaagannnnnnnnatcatgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnn 265  Q
    |||||||||| ||||||||||||||||||||||||||||        ||||||| |||||| |||||||||||||||||||||||||||||||           
T  21146956 ggggtgtattggatcatgattctaagggattttaaaagactttttt-atcatgaaaaagtcgtgtggtattcaatcaagactctttccaatttaaaaaaa 21147054  T
Q  266 gttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaa 365  Q
    || ||||||||||||||||| ||||||||||||||       ||||| |||||||||||||||| | ||||||||||       ||||||||||||||||    
T  21147055 gtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaa 21147154  T
Q  366 aatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 465  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21147155 aatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 21147254  T
Q  466 catgagatttcttatgattg 485  Q
    |||||||||||||| |||||    
T  21147255 catgagatttcttaggattg 21147274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 166; E-Value: 2e-88
Query Start/End: Original strand, 167 - 485
Target Start/End: Complemental strand, 33656359 - 33656040
Alignment:
Q  167 gggtgtatttgatcatgattctaagggattttaaaagannnnnnnnatcatgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnng 266  Q
    ||||||||| |||||||||| |||||||||||||||||        ||||||| ||||||||||||||||||||||||||||||| ||||||       |    
T  33656359 gggtgtattggatcatgattttaagggattttaaaagattttttt-atcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttaaaaaaag 33656261  T
Q  267 ttttgtgttattcaatcaaaattcttt--gtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattca 364  Q
    | ||||||||||||||||| |||||||  |||||||       ||||| |||||||||||||||| | ||||||||||        |||| |||||||||    
T  33656260 tcttgtgttattcaatcaagattctttttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaatctaatggtattca 33656161  T
Q  365 aaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaa 464  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33656160 aaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaa 33656061  T
Q  465 acatgagatttcttatgattg 485  Q
    | ||||||||||||| |||||    
T  33656060 atatgagatttcttaggattg 33656040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 167 - 509
Target Start/End: Complemental strand, 27459265 - 27458925
Alignment:
Q  167 gggtgtatttgatcatgattctaagggattttaaaagannnnnnnnatcatgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnng 266  Q
    ||||||||| |||||||||||||| ||||||||||| |        ||||||| ||||||| || |||||||||||||||||||||||||||       |    
T  27459265 gggtgtattggatcatgattctaacggattttaaaa-aacttttttatcatgaaaaagtctcgtagtattcaatcaagactctttccaatttaaaaaaag 27459167  T
Q  267 ttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaa 366  Q
    | |||||||||||||| || ||||||||||||||       ||||| | |||||||||||||| | ||||||||||       |||||||||||||||||    
T  27459166 tcttgtgttattcaattaagattctttgtcatttaaaaaaagtcttgtagtattcaatcaagactcttaatcacttaaaaaa-gtctagtggtattcaaa 27459068  T
Q  367 atcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaac 466  Q
    |||||||| |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||    
T  27459067 atcattcagattttgaaggattgtttaataaattagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaaatcattcatgaaaac 27458968  T
Q  467 atgagatttcttatgattgnnnnnnncttttaagattttacta 509  Q
    |||| |||||||| |||||       |||||||||||||||||    
T  27458967 atgatatttcttaggattgtttttttcttttaagattttacta 27458925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 216 - 479
Target Start/End: Original strand, 139211 - 139474
Alignment:
Q  216 atgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnngttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatg 315  Q
    |||| |||||||| | |||||||||||||||||||| ||||||       |||||||||||||||||||| ||||||||||||||       ||| | ||    
T  139211 atgaaaaagtcttttagtattcaatcaagactcttttcaatttaaaaaaagttttgtgttattcaatcaagattctttgtcatttaaaaaaagtcatgtg 139310  T
Q  316 gtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggatt 415  Q
    |||||||||||||| | ||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  139311 gtattcaatcaagacttttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaaccagattttgatggatt 139410  T
Q  416 ttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 479  Q
    |||| |||||||| ||||||||||||  ||||||||||||||||| ||||||||||||||||||    
T  139411 ttgttggattttccagtgaaattttaatatgaaaaagtctttcataaaaacatgagatttctta 139474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 269 - 479
Target Start/End: Complemental strand, 5273134 - 5272924
Alignment:
Q  269 ttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaat 368  Q
    ||||| ||||||||||| ||||||||||||||       |||||||||||||||||||||| | ||||||| ||       |||||||||||||||||||    
T  5273134 ttgtgctattcaatcaagattctttgtcatttaaaaaaagtcttatggtattcaatcaagactcttaatcatttaaaaaaagtctagtggtattcaaaat 5273035  T
Q  369 cattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 468  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  5273034 cattcaaatttcgaatgattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcataaaaacat 5272935  T
Q  469 gagatttctta 479  Q
    |||||||||||    
T  5272934 gagatttctta 5272924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 316 - 509
Target Start/End: Complemental strand, 7016907 - 7016714
Alignment:
Q  316 gtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggatt 415  Q
    |||||||||||||| | ||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7016907 gtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggatt 7016808  T
Q  416 ttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttatgattgnnnnnnncttttaagattttacta 509  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||  ||||       |||||||||||||||||    
T  7016807 ttgtgggattttctagtgaaattttagcatgaaaaagtctttcataaaaacatgagatttcttagaattgtttttttcttttaagattttacta 7016714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 178 - 509
Target Start/End: Complemental strand, 32158204 - 32157869
Alignment:
Q  178 atcatgattctaagggattttaaaagannnnnnnnatcatgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnn-gttttgtgtta 276  Q
    ||||||||||||||| |||||||||||        ||||||| ||||||||||||||||||||||||||||||| ||||||        || ||||||||    
T  32158204 atcatgattctaaggaattttaaaagactttttt-atcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttaaaaaaaagtcttgtgtta 32158106  T
Q  277 ttcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnn-gtctagtggtattcaaaatcattcaa 375  Q
    ||||||||| ||||||||||||||       ||||| ||||||||||||||||    |||||||||        ||||||||||||||||||||||||||    
T  32158105 ttcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagacccctaatcacttaaaaaaaagtctagtggtattcaaaatcattcaa 32158006  T
Q  376 atttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaa---agtctttcatgaaaacatgaga 472  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||||||||| |||||   ||||||||||||||||||||||    
T  32158005 atttcgaaggattgtttaataaattagattttgacggattttgtgggattttctagtaaaattttagcacgaaaaaatagtctttcatgaaaacatgaga 32157906  T
Q  473 tttcttatgattgnnnnnnncttttaagattttacta 509  Q
    |||||||  ||||       |||||||||||||||||    
T  32157905 tttcttaaaattgttcttttcttttaagattttacta 32157869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 167 - 451
Target Start/End: Original strand, 6460682 - 6460965
Alignment:
Q  167 gggtgtatttgatcatgattctaagggattttaaaagannnnnnnnatcatgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnng 266  Q
    |||||||||  |||||||||||||||||||||||||||        || |||| ||||||||||||||||||||||||||||||||||| ||       |    
T  6460682 gggtgtattgaatcatgattctaagggattttaaaagattttttt-ataatgaaaaagtcttgtggtattcaatcaagactctttccaacttaaaaaaag 6460780  T
Q  267 ttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaa 366  Q
    | || |||||||||||||| ||||||||||||||       ||| | | |||||||||||||| | ||||||| ||        ||||||||||||||||    
T  6460781 tcttatgttattcaatcaagattctttgtcatttaaaaaaagtcatgtcgtattcaatcaagactcttaatcatttaaaaaaaatctagtggtattcaaa 6460880  T
Q  367 atcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaa 451  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||    
T  6460881 atcattcaaatttcgaaggtttgtttaataaatcagattttgatggattttgagggattttctagtgaaattttatcatgaaaaa 6460965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 308 - 465
Target Start/End: Original strand, 849177 - 849334
Alignment:
Q  308 gtcttatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttt 407  Q
    ||||| |||||||||||||||| | ||||||||||       ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  849177 gtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctaatggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttt 849276  T
Q  408 gatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 465  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  849277 gatagattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 849334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 216 - 478
Target Start/End: Original strand, 13925869 - 13926131
Alignment:
Q  216 atgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnngttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatg 315  Q
    |||| |||||||||||||||| |||||||||| ||| ||| ||       |||||||| ||||||||||| | ||||||||||||       |||||  |    
T  13925869 atgaaaaagtcttgtggtatttaatcaagactttttgcaacttaaaaaaagttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgag 13925968  T
Q  316 gtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggatt 415  Q
    |||||||||||||||| || || ||||       |||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  13925969 gtattcaatcaagatttttcattacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggatt 13926068  T
Q  416 ttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 478  Q
    |||||||||||| ||||| ||||||| || |||||||||||||| ||||| |||| |||||||    
T  13926069 ttgtgggattttgtagtgtaattttaacaagaaaaagtctttcaagaaaagatgatatttctt 13926131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 216 - 478
Target Start/End: Complemental strand, 14000373 - 14000111
Alignment:
Q  216 atgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnngttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatg 315  Q
    |||| ||||||||||||||||||||||||||| ||| ||||||        | ||||| ||||||||||| | ||||||||||||       |||||  |    
T  14000373 atgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaaatcttgtggtattcaatcaagactctttgtcatttttaaaaagtcttgag 14000274  T
Q  316 gtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggatt 415  Q
    |||||||||||||| | || |||| ||       |||| ||||||||||||||||||||||||| |||||||||||||||||||  ||||||||||||||    
T  14000273 gtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggatt 14000174  T
Q  416 ttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 478  Q
    |||||||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||    
T  14000173 ttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 14000111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 216 - 475
Target Start/End: Complemental strand, 4550525 - 4550266
Alignment:
Q  216 atgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnngttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatg 315  Q
    |||| ||||||||||||||||||||||||||| ||| ||| ||       || ||||| ||||||||||| | ||||||||||||       | |||  |    
T  4550525 atgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaacaaaggcttgag 4550426  T
Q  316 gtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggatt 415  Q
    |||||||||||||| | || |||||||       |||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  4550425 gtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggatt 4550326  T
Q  416 ttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagattt 475  Q
    |||||| ||||| ||||| ||||||| || |||| ||||||||||||||| |||||||||    
T  4550325 ttgtggaattttgtagtgtaattttaacaagaaagagtctttcatgaaaagatgagattt 4550266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 269 - 485
Target Start/End: Complemental strand, 1152318 - 1152102
Alignment:
Q  269 ttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaat 368  Q
    ||||| ||||||||||| | ||||||||||||       |||||  ||||||||||||||| | || |||||||       |||| ||||||||||||||    
T  1152318 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactttttatcacttaaaaaaagtcttgtggtattcaaaat 1152219  T
Q  369 cattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 468  Q
    |||||||||||||| ||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || |||||||||||| ||||||| ||    
T  1152218 cattcaaatttcgagggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtcttttatgaaaagat 1152119  T
Q  469 gagatttcttatgattg 485  Q
    ||||||||||| |||||    
T  1152118 gagatttcttaagattg 1152102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 350 - 478
Target Start/End: Original strand, 39852417 - 39852545
Alignment:
Q  350 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 449  Q
    |||| ||||||||||||||||||||||||||||||||||||||| |||||  |||||||||||||||| ||||||||| ||||| ||||||| || ||||    
T  39852417 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttactaaattggattttgatggattttatgggattttgtagtgtaattttaacaagaaa 39852516  T
Q  450 aagtctttcatgaaaacatgagatttctt 478  Q
    |||||||||||||||| ||||||||||||    
T  39852517 aagtctttcatgaaaagatgagatttctt 39852545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 359 - 478
Target Start/End: Complemental strand, 7947698 - 7947579
Alignment:
Q  359 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttc 458  Q
    |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||| ||||| ||||| ||||||| || |||||||||||||    
T  7947698 tattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtggaattttgtagtgtaattttaacaagaaaaagtctttc 7947599  T
Q  459 atgaaaacatgagatttctt 478  Q
    ||||||| | ||||||||||    
T  7947598 atgaaaagaagagatttctt 7947579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 314 - 485
Target Start/End: Original strand, 9689694 - 9689864
Alignment:
Q  314 tggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatgga 413  Q
    |||||||||||||||| | || |||||||       |||| |||||||| ||||||||| |||||||||| |||||||| |||||| |||||||||||||    
T  9689694 tggtattcaatcaagactcttcatcacttaaaaaaagtcttgtggtatttaaaatcatt-aaatttcgaatgattgtttgataaattagattttgatgga 9689792  T
Q  414 ttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttatgattg 485  Q
    || |||| |||||||| || ||||||||  ||||||||||||||||| ||||||| ||||||||||||||||    
T  9689793 ttgtgtgagattttcttgtaaaattttattatgaaaaagtctttcataaaaacataagatttcttatgattg 9689864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 213 - 445
Target Start/End: Complemental strand, 14465497 - 14465266
Alignment:
Q  213 atcatgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnngttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtctt 312  Q
    ||||||| |||||||||||||||||||| || ||||||||||||||       || | | || |||||||||| | ||||||||||||       || ||    
T  14465497 atcatgaaaaagtcttgtggtattcaattaaaactctttccaatttaaaaaaagtctggggt-attcaatcaagactctttgtcatttaaaaaaagtttt 14465399  T
Q  313 atggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatgg 412  Q
     |||||||||||||||| | || ||| |||       |||| ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||     
T  14465398 ctggtattcaatcaagactcttcatcgcttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaagattgtttaataaatcggattttgatga 14465299  T
Q  413 attttgtgggattttctagtgaaattttagcat 445  Q
    ||||||||| |||||||||| | ||||||||||    
T  14465298 attttgtggaattttctagtaatattttagcat 14465266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 216 - 478
Target Start/End: Complemental strand, 4240720 - 4240468
Alignment:
Q  216 atgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnngttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatg 315  Q
    |||| ||||| ||||||||||||||||||||| ||| ||| ||        | ||||| ||||||||||| | ||||||||||||       |||||  |    
T  4240720 atgaaaaagttttgtggtattcaatcaagactttttgcaacttaaaaaaaatcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgag 4240621  T
Q  316 gtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggatt 415  Q
    |||||||||||||| | || |||||||       |||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  4240620 gtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggatt 4240521  T
Q  416 ttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 478  Q
    |||          ||||| ||||||| || |||||||||||||||||| | ||||||||||||    
T  4240520 ttg----------tagtgtaattttaacaagaaaaagtctttcatgaatagatgagatttctt 4240468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 227 - 478
Target Start/End: Original strand, 5949058 - 5949298
Alignment:
Q  227 ttgtggtattcaatcaagactctttccaatttnnnnnnngttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatca 326  Q
    ||||||||||||||||| ||| ||| ||| ||       || ||||| ||||||||||| | ||||||||||||       |||||  ||||||||||||    
T  5949058 ttgtggtattcaatcaaaactttttgcaacttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatca 5949157  T
Q  327 agattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattt 426  Q
    | ||| || |||||||        ||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||            
T  5949158 aaatttttcatcacttaaaaaaa-tcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttg-------- 5949248  T
Q  427 tctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 478  Q
      ||||| ||||||| || |||||||||||||||||||| ||||||||||||    
T  5949249 --tagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 5949298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 216 - 485
Target Start/End: Original strand, 22746235 - 22746496
Alignment:
Q  216 atgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnngttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatg 315  Q
    |||| ||||||||||||||||| || |||||| ||| ||| ||       || ||||| ||||||||||||| ||||||||||||       |||||  |    
T  22746235 atgaaaaagtcttgtggtattcgattaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaaaactctttgtcattttaaaaaagtcttgag 22746334  T
Q  316 gtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggatt 415  Q
    |||||||||||| | | || |||||||       |||| ||| ||||||||||||||||||||||||| |||||||||||||||   |||||||||||||    
T  22746335 gtattcaatcaaaacttttcatcacttaaaaaaagtcttgtgatattcaaaatcattcaaatttcgaatgattgtttaataaattgaattttgatggatt 22746434  T
Q  416 ttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttatgattg 485  Q
    ||||||||        || ||||||| || |||||| ||||||||||||| || |||||||||| |||||    
T  22746435 ttgtggga--------tgtaattttaacaagaaaaactctttcatgaaaagataagatttcttaagattg 22746496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 216 - 478
Target Start/End: Complemental strand, 40013970 - 40013718
Alignment:
Q  216 atgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnngttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatg 315  Q
    |||| ||||||||||| ||||||||||||||| ||| ||||||       || ||||| ||||||||||| | ||||||||||||       |||||  |    
T  40013970 atgaaaaagtcttgtgatattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgag 40013871  T
Q  316 gtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggatt 415  Q
    |||||||||||||| | || |||| ||        ||| ||| ||||||||||||||||||||||||||||||||||||| |||  |||||| |||||||    
T  40013870 gtattcaatcaagacttttcatcatttaaaaaaaatcttgtgttattcaaaatcattcaaatttcgaaggattgtttaatcaattggattttaatggatt 40013771  T
Q  416 ttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 478  Q
    |||          ||||| ||||||| || |||||||||||||||||||| ||||||||||||    
T  40013770 ttg----------tagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 40013718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 216 - 408
Target Start/End: Original strand, 37013852 - 37014044
Alignment:
Q  216 atgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnngttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatg 315  Q
    |||| ||||||||||||||||||||||||||| ||| ||| ||       || ||||| ||||||||||| | ||||||||||||       |||||  |    
T  37013852 atgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagactctttgtcatttttaaaaagtcttgag 37013951  T
Q  316 gtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg 408  Q
    |||||||||||||| | || |||||||       |||| | ||||||||||||||||||||||||||||| |||||||||||||  |||||||    
T  37013952 gtattcaatcaagacttttcatcacttaaaaaaagtcttgcggtattcaaaatcattcaaatttcgaagggttgtttaataaattggattttg 37014044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 359 - 419
Target Start/End: Complemental strand, 1461263 - 1461203
Alignment:
Q  359 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgt 419  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  1461263 tattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgt 1461203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 166 - 258
Target Start/End: Complemental strand, 7017014 - 7016923
Alignment:
Q  166 ggggtgtatttgatcatgattctaagggattttaaaagannnnnnnnatcatgataaagtcttgtggtattcaatcaagactctttccaattt 258  Q
    |||||||||| ||||||||||||||||||||||||||||        ||||||| ||||||||||||||||||||||||||||||| ||||||    
T  7017014 ggggtgtattggatcatgattctaagggattttaaaagactttttt-atcatgaaaaagtcttgtggtattcaatcaagactcttttcaattt 7016923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 166 - 249
Target Start/End: Original strand, 43319135 - 43319218
Alignment:
Q  166 ggggtgtatttgatcatgattctaagggattttaaaagannnnnnnnatcatgataaagtcttgtggtattcaatcaagactct 249  Q
    |||||||||| ||||||||||||||||||||||||||||        ||||||| |||||||||||||||||||||||||||||    
T  43319135 ggggtgtattggatcatgattctaagggattttaaaagactttttttatcatgaaaaagtcttgtggtattcaatcaagactct 43319218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 275 - 485
Target Start/End: Complemental strand, 9220916 - 9220716
Alignment:
Q  275 tattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattca 374  Q
    ||||||||||||| ||||||||||||       ||||| || ||||||||||||| | || |||||||       ||||  || ||||||||||||||||    
T  9220916 tattcaatcaaaactctttgtcatttagaaaaagtcttgtgatattcaatcaagactctttatcacttaaaaaaagtcttatgatattcaaaatcattca 9220817  T
Q  375 aatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatt 474  Q
    |||||| |||||||||||||| ||| ||| ||||          | ||||||| |||| |||||||| || ||||||||||||| ||||||||||| |||    
T  9220816 aatttctaaggattgtttaatgaattagaatttg----------taggattttatagtaaaattttaacacgaaaaagtctttcgtgaaaacatgatatt 9220727  T
Q  475 tcttatgattg 485  Q
    ||||| |||||    
T  9220726 tcttaggattg 9220716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 169 - 331
Target Start/End: Complemental strand, 5273276 - 5273114
Alignment:
Q  169 gtgtatttgatcatgattctaagggattttaaaagannnnnnnnatcatgataaag-tcttgtggtattcaatcaagactctttccaatttnnnnnnngt 267  Q
    ||||||| |||||||||| |||||||||||||||||        ||||||| |||  ||||||||||||||||||||| ||||||||||||       ||    
T  5273276 gtgtattggatcatgattttaagggattttaaaagactttttt-atcatgaaaaaaatcttgtggtattcaatcaagattctttccaatttaaaaaaagt 5273178  T
Q  268 tttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagatt 331  Q
     ||||||||||||||||| ||| ||||||||||       ||||| || |||||||||||||||    
T  5273177 cttgtgttattcaatcaagattttttgtcatttaaaaaaagtcttgtgctattcaatcaagatt 5273114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 83
Target Start/End: Original strand, 39546072 - 39546125
Alignment:
Q  30 atgtgcttaatttcatgcatgttattgtgatctattctatttatctatgaattt 83  Q
    ||||| |||||||||||||| ||| |||||||||||||||||||||||||||||    
T  39546072 atgtgtttaatttcatgcatattagtgtgatctattctatttatctatgaattt 39546125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 169 - 255
Target Start/End: Original strand, 9689553 - 9689637
Alignment:
Q  169 gtgtatttgatcatgattctaagggattttaaaagannnnnnnnatcatgataaagtcttgtggtattcaatcaagactctttccaa 255  Q
    ||||||| ||| |||||||||||||||||||| |||        || |||| |||||||||||||||||||||||||||||||||||    
T  9689553 gtgtattggattatgattctaagggattttaatagacttttt--attatgaaaaagtcttgtggtattcaatcaagactctttccaa 9689637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 213 - 250
Target Start/End: Original strand, 849166 - 849203
Alignment:
Q  213 atcatgataaagtcttgtggtattcaatcaagactctt 250  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  849166 atcatgaaaaagtcttgtggtattcaatcaagactctt 849203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 221 - 251
Target Start/End: Complemental strand, 1152324 - 1152294
Alignment:
Q  221 aaagtcttgtggtattcaatcaagactcttt 251  Q
    |||||||||||||||||||||||||||||||    
T  1152324 aaagtcttgtggtattcaatcaagactcttt 1152294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 221 - 251
Target Start/End: Original strand, 5949094 - 5949124
Alignment:
Q  221 aaagtcttgtggtattcaatcaagactcttt 251  Q
    |||||||||||||||||||||||||||||||    
T  5949094 aaagtcttgtggtattcaatcaagactcttt 5949124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 250
Target Start/End: Complemental strand, 16894081 - 16894052
Alignment:
Q  221 aaagtcttgtggtattcaatcaagactctt 250  Q
    ||||||||||||||||||||||||||||||    
T  16894081 aaagtcttgtggtattcaatcaagactctt 16894052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 168 - 258
Target Start/End: Complemental strand, 16894174 - 16894086
Alignment:
Q  168 ggtgtatttgatcatgattctaagggattttaaaagannnnnnnnatcatgataaagtcttgtggtattcaatcaagactctttccaattt 258  Q
    |||||||| |||||| |||||||||||||||||||||        ||||| | ||| ||||||||||||||||||| | ||||||||||||    
T  16894174 ggtgtattggatcataattctaagggattttaaaaga-cttttttatcat-aaaaattcttgtggtattcaatcaaaattctttccaattt 16894086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 223 - 251
Target Start/End: Complemental strand, 1461357 - 1461329
Alignment:
Q  223 agtcttgtggtattcaatcaagactcttt 251  Q
    |||||||||||||||||||||||||||||    
T  1461357 agtcttgtggtattcaatcaagactcttt 1461329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 192; Significance: 1e-104; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 165 - 509
Target Start/End: Original strand, 16269580 - 16269923
Alignment:
Q  165 aggggtgtatttgatcatgattctaagggattttaaaagannnnnnnnatcatgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnn 264  Q
    ||||||||||| ||||||||||||||||||||||||||||        || |||| ||||||||||||||||||||||||||||||||||||||          
T  16269580 aggggtgtattggatcatgattctaagggattttaaaagactttttt-attatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaa 16269678  T
Q  265 ngttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattca 364  Q
     || ||||||||||||||||| ||||||||||||||       ||||| |||||||||||||||| | ||||||||||       |||||||||||||||    
T  16269679 agtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattca 16269778  T
Q  365 aaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaa 464  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  16269779 aaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttatagtgaaattttagcatgaaaaagtctttcatgaaa 16269878  T
Q  465 acatgagatttcttatgattgnnnnnnncttttaagattttacta 509  Q
    ||||||||||||||| |||||       |||||||||||||||||    
T  16269879 acatgagatttcttaggattgtttttttcttttaagattttacta 16269923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 166 - 485
Target Start/End: Original strand, 24776245 - 24776563
Alignment:
Q  166 ggggtgtatttgatcatgattctaagggattttaaaagannnnnnnnatcatgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnn 265  Q
    |||||||||| ||||||||||||||||||||||||||||        ||||||| |||||||||||||||||||||||||||||||| |||||           
T  24776245 ggggtgtattggatcatgattctaagggattttaaaagactttttt-atcatgaaaaagtcttgtggtattcaatcaagactctttctaatttaaaaaaa 24776343  T
Q  266 gttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaa 365  Q
    || ||||||||||||||||| ||||||||||||||       ||||| |||||||||||||||| | ||||||||||       ||||||||||||||||    
T  24776344 gtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaa 24776443  T
Q  366 aatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 465  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24776444 aatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 24776543  T
Q  466 catgagatttcttatgattg 485  Q
    |||||||||||||| |||||    
T  24776544 catgagatttcttaggattg 24776563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 166 - 509
Target Start/End: Complemental strand, 31170944 - 31170602
Alignment:
Q  166 ggggtgtatttgatcatgattctaagggattttaaaagannnnnnnnatcatgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnn 265  Q
    |||||||||| ||||||||||||||||||||||||||||        ||||||| ||||||||||| ||||||||||||||||||||||||||           
T  31170944 ggggtgtattggatcatgattctaagggattttaaaagactttttt-atcatgaaaaagtcttgtgatattcaatcaagactctttccaatttaaaaaaa 31170846  T
Q  266 gttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaa 365  Q
    || ||||||||||||||||| ||||||||||||||       ||||| |||||||||||||||| | ||||||||||       ||||||||||||||||    
T  31170845 gtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaa 31170746  T
Q  366 aatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 465  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31170745 aatcattcaaatttccaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 31170646  T
Q  466 catgagatttcttatgattgnnnnnnncttttaagattttacta 509  Q
    |||||||||||||| |||||       |||||||||||||||||    
T  31170645 catgagatttcttaggattgtttttttcttttaagattttacta 31170602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 184; E-Value: 3e-99
Query Start/End: Original strand, 168 - 509
Target Start/End: Complemental strand, 14198894 - 14198555
Alignment:
Q  168 ggtgtatttgatcatgattctaagggattttaaaagannnnnnnnatcatgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnngt 267  Q
    |||||||| ||||||||||||||||||||||||||||        ||||||| |||||||||||||||||||||||||||||||| |||||       ||    
T  14198894 ggtgtattggatcatgattctaagggattttaaaagactttttt-atcatgaaaaagtcttgtggtattcaatcaagactctttctaatttaaaaaa-gt 14198797  T
Q  268 tttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaa 367  Q
     ||||||||||||||||||||||||||||||||       ||||| |||||||||||||||| | ||||||||||       ||| ||||||||||||||    
T  14198796 cttgtgttattcaatcaaaattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtccagtggtattcaaaa 14198697  T
Q  368 tcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaaca 467  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  14198696 tcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaattctttcatgaaaaca 14198597  T
Q  468 tgagatttcttatgattgnnnnnnncttttaagattttacta 509  Q
    |||||||||||| |||||       |||||||||||||||||    
T  14198596 tgagatttcttaggattgtttttttcttttaagattttacta 14198555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 177; E-Value: 4e-95
Query Start/End: Original strand, 221 - 509
Target Start/End: Original strand, 20605180 - 20605468
Alignment:
Q  221 aaagtcttgtggtattcaatcaagactctttccaatttnnnnnnngttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtatt 320  Q
    ||||||||||||||||||||||||||||||||||||||       || ||||||||||||||||| ||||||||||||||       ||||| |||||||    
T  20605180 aaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtatt 20605279  T
Q  321 caatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtg 420  Q
    ||||||||| | ||||||||||       ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  20605280 caatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattaaaatttcgaaggattgtttaataaatcagattttgatggattttgtg 20605379  T
Q  421 ggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttatgattgnnnnnnncttttaagattttacta 509  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||       |||||||||||||||||    
T  20605380 ggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttcttttaagattttacta 20605468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 177; E-Value: 4e-95
Query Start/End: Original strand, 165 - 509
Target Start/End: Original strand, 35316951 - 35317294
Alignment:
Q  165 aggggtgtatttgatcatgattctaagggattttaaaagannnnnnnnatcatgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnn 264  Q
    |||||||||||  ||||||||||||||||||||||||| |        ||||||| ||||||||||||||||||||||||||||||||||||||          
T  35316951 aggggtgtattgaatcatgattctaagggattttaaaa-aacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaa 35317049  T
Q  265 ngttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattca 364  Q
     |||||||||||||||||||| ||||||||||||||       ||||| |  ||||||||||||| | ||||||||||       |||||||||||||||    
T  35317050 agttttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtaatattcaatcaagactcttaatcacttaaaaaaagtctagtggtattca 35317149  T
Q  365 aaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaa 464  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  35317150 aaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaa 35317249  T
Q  465 acatgagatttcttatgattgnnnnnnncttttaagattttacta 509  Q
    |||| ||||||||||  ||||       |||||||||||||||||    
T  35317250 acataagatttcttaacattgtttttttcttttaagattttacta 35317294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 175; E-Value: 7e-94
Query Start/End: Original strand, 166 - 509
Target Start/End: Original strand, 12407270 - 12407612
Alignment:
Q  166 ggggtgtatttgatcatgattctaagggattttaaaagannnnnnnnatcatgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnn 265  Q
    |||||||||| ||||||||||||||| ||||||||||||        ||||||| ||||||||||||||||||||||||| ||||| ||||||           
T  12407270 ggggtgtattggatcatgattctaagagattttaaaagactttttt-atcatgaaaaagtcttgtggtattcaatcaagattcttttcaattttaaaaaa 12407368  T
Q  266 gttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaa 365  Q
    || ||||||||||||||||| ||||||||||||||       ||||| |||||||||||| ||| | ||||||||||       ||||||||||||||||    
T  12407369 gtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcgagactcttaatcacttaaaaaaagtctagtggtattcaa 12407468  T
Q  366 aatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 465  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  12407469 aatcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttaccatgaaaaagtctttcatgaaaa 12407568  T
Q  466 catgagatttcttatgattgnnnnnnncttttaagattttacta 509  Q
    |||||||||||||| |||||       |||||||||||||||||    
T  12407569 catgagatttcttaagattgtttttttcttttaagattttacta 12407612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 170; E-Value: 7e-91
Query Start/End: Original strand, 167 - 509
Target Start/End: Complemental strand, 22552082 - 22551741
Alignment:
Q  167 gggtgtatttgatcatgattctaagggattttaaaagannnnnnnnatcatgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnng 266  Q
    ||||||||| ||||||||||||||||||||||||||||        ||||||| ||||||||||||||||||||||||| | ||||||||||       |    
T  22552082 gggtgtattggatcatgattctaagggattttaaaagactttttt-atcatgaaaaagtcttgtggtattcaatcaagattttttccaatttaaaaaaag 22551984  T
Q  267 ttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaa 366  Q
    | ||||||||||||||||| ||||||||||||||       ||||| |||||||||||||||| | ||||||||||       |||||||||||||||||    
T  22551983 tcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagacttttaatcacttaaaaaaagtctagtggtattcaaa 22551884  T
Q  367 atcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaac 466  Q
    || |||||||||||||| ||||||||| ||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  22551883 attattcaaatttcgaatgattgtttattaaattaaattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtatttcatgaaaac 22551784  T
Q  467 atgagatttcttatgattgnnnnnnncttttaagattttacta 509  Q
    |||||||||||||||||||       |||||||||||||||||    
T  22551783 atgagatttcttatgattgttttttccttttaagattttacta 22551741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 169; E-Value: 3e-90
Query Start/End: Original strand, 166 - 509
Target Start/End: Complemental strand, 305787 - 305443
Alignment:
Q  166 ggggtgtatttgatcatgattctaagggattttaaaagannnnnnnnatcatgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnn 265  Q
    |||||||||| ||||||||||||||| ||||||||||||        ||||||| ||||||||||||||||||||||||||||||||||||||           
T  305787 ggggtgtattggatcatgattctaagcgattttaaaagactttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaa 305688  T
Q  266 -gttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattca 364  Q
     || ||||||||||||||||| ||| ||||||||||       ||||| |||||||||||||||| | ||||||||||       |||||||||||||||    
T  305687 agtcttgtgttattcaatcaagattatttgtcatttgaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattca 305588  T
Q  365 aaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaa 464  Q
    ||||||||||||||| ||| |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||    
T  305587 aaatcattcaaattttgaatgattgtttaataaatcagatttcgatggattttgtgagattttctagtgaaattttagaatgaaaaagtctttcatgaaa 305488  T
Q  465 acatgagatttcttatgattgnnnnnnncttttaagattttacta 509  Q
    ||||||||||||||| |||||       |||||||||||||||||    
T  305487 acatgagatttcttaggattgtttatttcttttaagattttacta 305443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 166 - 465
Target Start/End: Original strand, 1789332 - 1789630
Alignment:
Q  166 ggggtgtatttgatcatgattctaagggattttaaaagannnnnnnnatcatgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnn 265  Q
    |||||||||| ||||||||||||||| ||||||||||||        ||||| | ||||||||||||||||||||||| ||||||||||||||           
T  1789332 ggggtgtattggatcatgattctaagagattttaaaagattttttt-atcataaaaaagtcttgtggtattcaatcaaaactctttccaatttaaaaaaa 1789430  T
Q  266 gttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaa 365  Q
    || ||||||||||||||||| ||||||||||||||       |||||||| ||||||||||| | | ||||||||||       ||||||||||||||||    
T  1789431 gtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttatgatattcaatcaaaactcttaatcacttaaaaaaagtctagtggtattcaa 1789530  T
Q  366 aatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 465  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  1789531 aatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttcatcaaaa 1789630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 155; E-Value: 6e-82
Query Start/End: Original strand, 166 - 509
Target Start/End: Original strand, 43847536 - 43847878
Alignment:
Q  166 ggggtgtatttgatcatgattctaagggattttaaaagannnnnnnnatcatgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnn 265  Q
    |||||||||| |||||||  |||||||||||||||||||        ||| ||| |||||||| | |||||||| ||| ||||||||||||||           
T  43847536 ggggtgtattagatcatgtatctaagggattttaaaagactttttt-atcgtgaaaaagtcttctagtattcaagcaaaactctttccaatttaaaaaaa 43847634  T
Q  266 gttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaa 365  Q
    || ||||||||||||||||| ||||||||||||||       ||||| |||||||||||||||| | ||||||||||       ||||||| ||||||||    
T  43847635 gtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagttgtattcaa 43847734  T
Q  366 aatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 465  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||    
T  43847735 aatcattcaaatttcgaaggattgtttaataaatcagaatttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctgtcatgaaaa 43847834  T
Q  466 catgagatttcttatgattgnnnnnnncttttaagattttacta 509  Q
    |||||||||||||| |||||       |||||||||||||||||    
T  43847835 catgagatttcttaggattgtttttttcttttaagattttacta 43847878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 225 - 485
Target Start/End: Complemental strand, 5093309 - 5093049
Alignment:
Q  225 tcttgtggtattcaatcaagactctttccaatttnnnnnnngttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaat 324  Q
    ||||||||||||||||||||||||||||||||||       || ||||||||||||||||| ||||||||||||||       ||||| |||||||||||    
T  5093309 tcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaat 5093210  T
Q  325 caagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggat 424  Q
    |||||   ||||||||||       ||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  5093209 caagacgcttaatcacttaaaaaaagtctagtagtattcaaaatcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggat 5093110  T
Q  425 tttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttatgattg 485  Q
    |||||| ||||||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  5093109 tttctaatgaaattttagcatgaaaaagtctttcataaaaacatgagatttcttaggattg 5093049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 178 - 479
Target Start/End: Original strand, 32125152 - 32125455
Alignment:
Q  178 atcatgattctaagggattttaaaagannnnnnnnatcatgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnngttttgtgttat 277  Q
    ||||||||| |||||||||||||||||        || |||| ||||||||||||||||||||||||||||||| ||||||       || |||||||||    
T  32125152 atcatgattttaagggattttaaaagactttttt-ataatgaaaaagtcttgtggtattcaatcaagactcttttcaatttaaaaaaagtcttgtgttat 32125250  T
Q  278 tcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaat---cacttnnnnnnngtctagtggtattcaaaatcattca 374  Q
    |||||||||||||||||||||||       ||| | |||||||||||||||| | |||||   || ||       ||| |||||||||||||||||||||    
T  32125251 tcaatcaaaattctttgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaatgatcatttaaaaaaagtcaagtggtattcaaaatcattca 32125350  T
Q  375 aatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatt 474  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||    
T  32125351 aatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtaaaattttagcatgaaaaagtctttcatgaaaatatgagatt 32125450  T
Q  475 tctta 479  Q
    |||||    
T  32125451 tctta 32125455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 163 - 485
Target Start/End: Original strand, 44765662 - 44765974
Alignment:
Q  163 ttaggggtgtatttgatcatgattctaagggattttaaaagannnnnnnnatcatgataaagtcttgtggtattcaatcaagactctttccaatttnnnn 262  Q
    |||| |||||||| ||||||||||||||||||||||||||||        ||||||| ||||||||||||||||||||||| ||||||||||||||        
T  44765662 ttagaggtgtattggatcatgattctaagggattttaaaagactttttt-atcatgaaaaagtcttgtggtattcaatcaaaactctttccaatttaaaa 44765760  T
Q  263 nnngttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtatt 362  Q
       || ||||||||||||||||| ||||||||||||||       ||||| |||||||||||| ||| | ||||||||||       |||||||||||||    
T  44765761 aaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcgagactcttaatcacttaaaaaaagtctagtggtatt 44765860  T
Q  363 caaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatga 462  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||         ||||||||    
T  44765861 caaaatcattcaaatttcgaaagattgtttaataaataagattttgatggattttgtgggattttctagtgaaattttagcat---------tttcatga 44765951  T
Q  463 aaacatgagatttcttatgattg 485  Q
    ||||||||||||||||| |||||    
T  44765952 aaacatgagatttcttaggattg 44765974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 308 - 509
Target Start/End: Original strand, 9120157 - 9120358
Alignment:
Q  308 gtcttatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttt 407  Q
    ||||| || ||||||||||||||| ||||||||||        ||||||| |||||||||||||||| ||||  |||||||||||||||||| |||||||    
T  9120157 gtcttgtgttattcaatcaagattcttaatcacttaaaaaaaatctagtgatattcaaaatcattcagattttaaaggattgtttaataaattagatttt 9120256  T
Q  408 gatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttatgattgnnnnnnncttttaagattttac 507  Q
    ||||||||||||||||||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||| |||||       |||||||||||||||    
T  9120257 gatggattttgtgggattttctagtgaaattttagtatggaaaaatctttcatgaaaacatgagatttcttaggattgtttttttcttttaagattttac 9120356  T
Q  508 ta 509  Q
    ||    
T  9120357 ta 9120358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 216 - 478
Target Start/End: Original strand, 28844494 - 28844756
Alignment:
Q  216 atgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnngttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatg 315  Q
    |||| ||||||||||||||||||||||||||| ||| ||| ||       || ||||| ||||||||||| | ||||||||||||       |||||  |    
T  28844494 atgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgag 28844593  T
Q  316 gtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggatt 415  Q
    |||||||||||||| | || |||||||       |||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  28844594 gtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattagattttgatggatt 28844693  T
Q  416 ttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 478  Q
    |||||| ||||| ||||| |||||||  | ||||||||||||||| |||| ||||||||||||    
T  28844694 ttgtggaattttgtagtgtaattttaataagaaaaagtctttcataaaaagatgagatttctt 28844756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 216 - 478
Target Start/End: Original strand, 33135562 - 33135823
Alignment:
Q  216 atgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnngttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatg 315  Q
    |||| |||||||| |||||||||||||||||| ||| ||||||       || ||||| ||||||||||| | ||||||||||||       |||||  |    
T  33135562 atgaaaaagtcttatggtattcaatcaagactttttgcaatttaaaaaaagtattgtggtattcaatcaagactctttgtcattttaaaaaagtcttgag 33135661  T
Q  316 gtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggatt 415  Q
    |||||||||||||| | || |||||||       |||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  33135662 gtattcaatcaagacttttcatcacttaaaaaaagtctcgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggatt 33135761  T
Q  416 ttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 478  Q
    |||||||||||| ||||| ||||||| || ||||||||||||||| |||| ||||||||||||    
T  33135762 ttgtgggattttgtagtgtaattttaacaagaaaaagtctttcat-aaaaaatgagatttctt 33135823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 269 - 478
Target Start/End: Original strand, 10657398 - 10657607
Alignment:
Q  269 ttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaat 368  Q
    ||||| ||||||||||| || |||||||||||       || ||  ||||||||||||||| | || |||||||       |||| ||||||||||||||    
T  10657398 ttgtggtattcaatcaagatcctttgtcattttaaaaaagttttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaat 10657497  T
Q  369 cattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 468  Q
    ||||||||||||||| |||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || |||||||| ||||||||||| ||    
T  10657498 cattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagat 10657597  T
Q  469 gagatttctt 478  Q
    || |||||||    
T  10657598 gaaatttctt 10657607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 216 - 460
Target Start/End: Original strand, 26788723 - 26788969
Alignment:
Q  216 atgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnngttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatg 315  Q
    |||| ||||||||||||||||||||||||||| ||| ||||||       || ||||| ||||||||||| | ||||||||||||       |||||  |    
T  26788723 atgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgag 26788822  T
Q  316 gtattcaatcaagattattaatcacttnnnnnnn--gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatgga 413  Q
    |||||||||||||| | || |||| |          |||| ||||||||||||||||||||||||| |||||||||||||||||||  ||||||||||||    
T  26788823 gtattcaatcaagacttttcatcattcaaaaaaaaagtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatgga 26788922  T
Q  414 ttttgtgggattttctagtgaaattttagcatgaaaaagtctttcat 460  Q
    |||||||||||||| ||||| ||||||| || |||||||||||||||    
T  26788923 ttttgtgggattttgtagtgtaattttaacaagaaaaagtctttcat 26788969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 355 - 478
Target Start/End: Original strand, 18177345 - 18177468
Alignment:
Q  355 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 454  Q
    ||||||||||||||||||||||||||||||||||||||||| |||  |||||||||||||||||||||||||| ||||| ||||||| || |||||||||    
T  18177345 gtggtattcaaaatcattcaaatttcgaaggattgtttaattaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtc 18177444  T
Q  455 tttcatgaaaacatgagatttctt 478  Q
    ||| || |||| ||||||||||||    
T  18177445 tttaataaaaagatgagatttctt 18177468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 355 - 478
Target Start/End: Original strand, 25288237 - 25288360
Alignment:
Q  355 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 454  Q
    |||||||||||||||||||||||||||||||||||||||||||||  |||||||||| ||||||||||||||| ||||| ||||||| || || || |||    
T  25288237 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgggattttgtagtgtaattttaacaagagaacgtc 25288336  T
Q  455 tttcatgaaaacatgagatttctt 478  Q
    ||||||||||| ||||||||||||    
T  25288337 tttcatgaaaagatgagatttctt 25288360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 216 - 478
Target Start/End: Complemental strand, 28740554 - 28740302
Alignment:
Q  216 atgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnngttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatg 315  Q
    |||| ||||||||||||||||||||||| ||| ||| ||| ||       || ||||| ||||||||||| | ||||||||||||       |||||  |    
T  28740554 atgaaaaagtcttgtggtattcaatcaaaactttttgcaacttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgag 28740455  T
Q  316 gtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggatt 415  Q
    |||||||||||||| | || |||||||       |||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  28740454 gtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggatt 28740355  T
Q  416 ttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 478  Q
    |||||          ||| ||||||| || ||||||||||||||| |||| ||||||||||||    
T  28740354 ttgtg----------gtgtaattttaacaagaaaaagtctttcataaaaagatgagatttctt 28740302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 221 - 419
Target Start/End: Original strand, 7026548 - 7026746
Alignment:
Q  221 aaagtcttgtggtattcaatcaagactctttccaatttnnnnnnngttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtatt 320  Q
    ||||||||||||||||||||||||||| ||| ||||||       || ||||| ||||||||||| | ||||||||||||       |||||  ||||||    
T  7026548 aaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtatt 7026647  T
Q  321 caatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgt 419  Q
    ||||||||| | || |||| ||       |||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  7026648 caatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgt 7026746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 166 - 329
Target Start/End: Original strand, 20605042 - 20605204
Alignment:
Q  166 ggggtgtatttgatcatgattctaagggattttaaaagannnnnnnnatcatgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnn 265  Q
    |||||||||| ||||||||||||||||||||||||||||        ||||||| ||||||||||||||||||||||||||||||||||||||           
T  20605042 ggggtgtattggatcatgattctaagggattttaaaagacttttta-atcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaa 20605140  T
Q  266 gttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaaga 329  Q
    || ||||||||||||||||| ||||||||||||||       ||||| ||||||||||||||||    
T  20605141 gtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaaga 20605204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 166 - 417
Target Start/End: Complemental strand, 26601520 - 26601270
Alignment:
Q  166 ggggtgtatttgatcatgattctaagggattttaaaagannnnnnnnatcatgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnn 265  Q
    |||||||||| ||||||| |||||| |||||||||||||        || || | ||||||||||||||||||||||| |||||||| |||||           
T  26601520 ggggtgtattggatcatgtttctaaaggattttaaaagactttttt-attattaaaaagtcttgtggtattcaatcaaaactctttctaatttaaaaaaa 26601422  T
Q  266 gttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaa 365  Q
    ||||||||||||| |||||| | |||||||||||        ||||| | |||||||||||||| | ||||||||||       |||  |||||||||||    
T  26601421 gttttgtgttatttaatcaagactctttgtcattaaaaaaaagtcttgtagtattcaatcaagactcttaatcacttaaaaaaagtcacgtggtattcaa 26601322  T
Q  366 aatcattcaaatttcgaaggattgtttaataaatcagattttgatggatttt 417  Q
    |||||||||||||||||| | ||||||||||||||||||||||  |||||||    
T  26601321 aatcattcaaatttcgaatgtttgtttaataaatcagattttgtgggatttt 26601270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 367 - 478
Target Start/End: Original strand, 43078653 - 43078764
Alignment:
Q  367 atcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaac 466  Q
    ||||||||||||||||| |||||||||||||||  |||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||||| ||||     
T  43078653 atcattcaaatttcgaatgattgtttaataaattggattttcatggattttgtgggattttatagtgtaattttaacatgaaaaagtctttcataaaaag 43078752  T
Q  467 atgagatttctt 478  Q
    || |||||||||    
T  43078753 ataagatttctt 43078764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 216 - 485
Target Start/End: Complemental strand, 10125563 - 10125302
Alignment:
Q  216 atgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnngttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatg 315  Q
    |||| ||||||| |||  |||||||||||||||||| ||||||       |||||||| ||||||||||| | ||||||||||||       ||||| ||    
T  10125563 atgaaaaagtctcgtgacattcaatcaagactctttgcaatttaaaaaaagttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttttg 10125464  T
Q  316 g--tattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatgga 413  Q
       ||||||||||| | | || |||||||       ||||  || |||||||||||||||||||||| ||||||||||||||||||          || |    
T  10125463 agatattcaatcaaaacttttcatcacttaaaaaaagtctcatgatattcaaaatcattcaaatttcaaaggattgtttaataaat----------tgaa 10125374  T
Q  414 ttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttatgattg 485  Q
    |||||||||||||| ||||||||||||| || ||||||||||||||| |||||| ||||||||||| |||||    
T  10125373 ttttgtgggattttttagtgaaattttaacaagaaaaagtctttcataaaaacacgagatttcttaagattg 10125302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 356 - 478
Target Start/End: Complemental strand, 13833553 - 13833441
Alignment:
Q  356 tggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtct 455  Q
    |||||||||||||||||||||||| |||||||||||||||||||          |||||||||||||||||| ||||| ||||||| || ||||||||||    
T  13833553 tggtattcaaaatcattcaaattttgaaggattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtct 13833464  T
Q  456 ttcatgaaaacatgagatttctt 478  Q
    ||||||| || ||||||||||||    
T  13833463 ttcatgacaagatgagatttctt 13833441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 350 - 478
Target Start/End: Original strand, 3463745 - 3463863
Alignment:
Q  350 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 449  Q
    |||| |||||||| |||||||||||| |||| ||||||||||||||||||  |||||||||||||||||          ||||| ||||||| || ||||    
T  3463745 gtcttgtggtatttaaaatcattcaattttcaaaggattgtttaataaattggattttgatggattttg----------tagtgtaattttaacaagaaa 3463834  T
Q  450 aagtctttcatgaaaacatgagatttctt 478  Q
    |||||||||||||||| ||||||||||||    
T  3463835 aagtctttcatgaaaatatgagatttctt 3463863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 216 - 408
Target Start/End: Original strand, 3574786 - 3574978
Alignment:
Q  216 atgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnngttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatg 315  Q
    |||| ||||| ||||||||||||||||||||| ||| ||| ||       |||||||| ||||||||||| | |  |||||||||       |||||  |    
T  3574786 atgaaaaagttttgtggtattcaatcaagactttttgcaacttaaaaaaagttttgtggtattcaatcaagactaattgtcattttaaaaaagtcttgag 3574885  T
Q  316 gtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg 408  Q
    |||||||||||||| | || |||||||       |||| ||| |||||||||||||||||||||||||||||||||||||||||  |||||||    
T  3574886 gtattcaatcaagacttttcatcacttaaaaaaagtcttgtgatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 3574978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 166 - 292
Target Start/End: Original strand, 9120058 - 9120183
Alignment:
Q  166 ggggtgtatttgatcatgattctaagggattttaaaagannnnnnnnatcatgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnn 265  Q
    |||||||||| ||||||||||||||||||||||||||||        ||||||| ||| || |||||||||||||||||||||||||||||||           
T  9120058 ggggtgtattggatcatgattctaagggattttaaaagactttttt-atcatgaaaaaatcatgtggtattcaatcaagactctttccaattttaaaaaa 9120156  T
Q  266 gttttgtgttattcaatcaaaattctt 292  Q
    || ||||||||||||||||| ||||||    
T  9120157 gtcttgtgttattcaatcaagattctt 9120183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 356 - 419
Target Start/End: Original strand, 379016 - 379079
Alignment:
Q  356 tggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgt 419  Q
    |||||||||||||||||||||||| |||||||||||||||||||  ||||||||| ||||||||    
T  379016 tggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatagattttgt 379079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 216 - 392
Target Start/End: Complemental strand, 215496 - 215320
Alignment:
Q  216 atgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnngttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatg 315  Q
    |||| ||||||||||||||||||||||||||| ||| ||| ||       || ||||| ||||||||||| | ||||||||| ||       |||||  |    
T  215496 atgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagactctttgtcaattttaaaaagtcttgag 215397  T
Q  316 gtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgttt 392  Q
    |||||||||||||| | || |||||||       |||| |||||||||||||||||||||| ||| |||||||||||    
T  215396 gtattcaatcaagacttttcatcacttaaaaaaagtctcgtggtattcaaaatcattcaaacttcaaaggattgttt 215320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 350 - 408
Target Start/End: Complemental strand, 6224684 - 6224626
Alignment:
Q  350 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg 408  Q
    |||| |||||||||||||| ||||||||||||||||||| ||||||||||  |||||||    
T  6224684 gtcttgtggtattcaaaattattcaaatttcgaaggattatttaataaattggattttg 6224626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 421 - 478
Target Start/End: Complemental strand, 6224633 - 6224576
Alignment:
Q  421 ggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 478  Q
    ||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||    
T  6224633 ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 6224576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 350 - 399
Target Start/End: Complemental strand, 21370687 - 21370638
Alignment:
Q  350 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaat 399  Q
    |||| ||||||||||||||||||||||||| |||| ||||||| ||||||    
T  21370687 gtcttgtggtattcaaaatcattcaaattttgaagtattgtttgataaat 21370638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 421 - 476
Target Start/End: Complemental strand, 215303 - 215249
Alignment:
Q  421 ggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttc 476  Q
    ||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||    
T  215303 ggattttgtagtgtaattttaaca-gaaaaagtctttcatgaaaagatgagatttc 215249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 171 - 204
Target Start/End: Complemental strand, 5093352 - 5093319
Alignment:
Q  171 gtatttgatcatgattctaagggattttaaaaga 204  Q
    ||||| ||||||||||||||||||||||||||||    
T  5093352 gtattggatcatgattctaagggattttaaaaga 5093319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 186; Significance: 1e-100; HSPs: 71)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 166 - 485
Target Start/End: Complemental strand, 41881402 - 41881082
Alignment:
Q  166 ggggtgtatttgatcatgattctaagggattttaaaagannnnnnnnatcatgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnn 265  Q
    |||||||||| |||||||||| |||||||||||||||||        ||||||| ||||||||||||||||||||||||||||||||||||||           
T  41881402 ggggtgtattggatcatgattttaagggattttaaaagactttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaattttaaaaaa 41881303  T
Q  266 gttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnn-gtctagtggtattca 364  Q
    || ||||||||||||||||| ||||||||||||||       ||||| |||||||||||||||| | ||||||||||        || ||||||||||||    
T  41881302 gtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaagtttagtggtattca 41881203  T
Q  365 aaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaa 464  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41881202 aaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaa 41881103  T
Q  465 acatgagatttcttatgattg 485  Q
    ||||||||||||||| |||||    
T  41881102 acatgagatttcttaggattg 41881082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 183; E-Value: 1e-98
Query Start/End: Original strand, 166 - 509
Target Start/End: Original strand, 25331019 - 25331361
Alignment:
Q  166 ggggtgtatttgatcatgattctaagggattttaaaagannnnnnnnatcatgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnn 265  Q
    |||||||||| ||||||||||||||  ||||||||||||        ||||||| ||||||||||||||||||||||||||||||||||||||           
T  25331019 ggggtgtattggatcatgattctaaaagattttaaaagactttttt-atcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaa 25331117  T
Q  266 gttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaa 365  Q
    || ||||||||||||||||| ||||||||||||||       ||||| |||||||||||||||| | ||||||||||       |||||||| |||||||    
T  25331118 gtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtgatattcaa 25331217  T
Q  366 aatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 465  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25331218 aatcattcaaatttcaaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 25331317  T
Q  466 catgagatttcttatgattgnnnnnnncttttaagattttacta 509  Q
    |||||||||||||| |||||       |||||||||||||||||    
T  25331318 catgagatttcttaggattgtttttttcttttaagattttacta 25331361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 168; E-Value: 1e-89
Query Start/End: Original strand, 166 - 479
Target Start/End: Original strand, 1044698 - 1045007
Alignment:
Q  166 ggggtgtatttgatcatgattctaagggattttaaaagannnnnnnnatcatgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnn 265  Q
    |||||||||| ||||||||||||||||||||||||||||        ||||||| ||||||||||||||||||||||||||||||||||||||           
T  1044698 ggggtgtattggatcatgattctaagggattttaaaagattttttt-atcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaa- 1044795  T
Q  266 gttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaa 365  Q
    || ||||||||||||||||| |||| |||||||||       ||||| |||||||||||||||| | ||||||||||       ||||||||||||||||    
T  1044796 gtcttgtgttattcaatcaagattccttgtcatttaaaaa--gtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaa 1044893  T
Q  366 aatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 465  Q
    || ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1044894 aaccattcaactttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 1044993  T
Q  466 catgagatttctta 479  Q
    ||| ||||||||||    
T  1044994 cataagatttctta 1045007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 166; E-Value: 2e-88
Query Start/End: Original strand, 166 - 479
Target Start/End: Original strand, 22201903 - 22202215
Alignment:
Q  166 ggggtgtatttgatcatgattctaagggattttaaaagannnnnnnnatcatgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnn 265  Q
    |||||||||| ||||||||||||||||||||||||||||        ||||||| ||||||||||| ||||||||||||||||||||||||||           
T  22201903 ggggtgtattggatcatgattctaagggattttaaaagactttttt-atcatgaaaaagtcttgtgatattcaatcaagactctttccaatttaaaaaaa 22202001  T
Q  266 gttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaa 365  Q
    || ||||||||||||||||| ||||||||||||||       ||||| |||||||||||||||| | ||||||||||       ||||||||||||||||    
T  22202002 gtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaa 22202101  T
Q  366 aatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 465  Q
    ||||||| ||||||| || ||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22202102 aatcattaaaatttcaaaagattgtttaataaataaaattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 22202201  T
Q  466 catgagatttctta 479  Q
    ||| ||||||||||    
T  22202202 cattagatttctta 22202215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 177 - 484
Target Start/End: Complemental strand, 32951143 - 32950837
Alignment:
Q  177 gatcatgattctaagggattttaaaagannnnnnnnatcatgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnngttttgtgtta 276  Q
    ||||||||||||||||||||||||||||        || |||| ||||||||||||||||||||||||||||||| ||||||       || ||||||||    
T  32951143 gatcatgattctaagggattttaaaagactttttt-ataatgaaaaagtcttgtggtattcaatcaagactcttttcaatttaaaaaaagtcttgtgtta 32951045  T
Q  277 ttcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaa 376  Q
    ||||||||| ||| ||||||||||       ||| | |||||||||||||||| | ||||||||||       |||||||||||||||||||||||||||    
T  32951044 ttcaatcaagattatttgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaa 32950945  T
Q  377 tttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttc 476  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  32950944 tttcgaaggattgtttaataaatcagattttgatgaattttgtgggattttctagtgaaattttagcatgaaaaattctttcatgaaaacatgagatttc 32950845  T
Q  477 ttatgatt 484  Q
    ||| ||||    
T  32950844 ttaagatt 32950837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 166 - 509
Target Start/End: Complemental strand, 30009995 - 30009653
Alignment:
Q  166 ggggtgtatttgatcatgattctaagggattttaaaagannnnnnnnatcatgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnn 265  Q
    |||||||||| ||||||||||||||||||||||||||||        || |||| |||||||| | |||||||||||||||||||||||||||           
T  30009995 ggggtgtattggatcatgattctaagggattttaaaagacattttt-attatgaaaaagtcttattgtattcaatcaagactctttccaatttaaaaaaa 30009897  T
Q  266 gttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaa 365  Q
    || |||||||||| |||||||||||||| ||||||       ||| | |||||||||||||||| | ||||||||||       ||||||||||||||||    
T  30009896 gtcttgtgttatttaatcaaaattctttatcatttaaaaaaagtcctgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaa 30009797  T
Q  366 aatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 465  Q
    ||||||| ||||||  || |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  30009796 aatcatttaaattttaaatgattgtttaataaatcagattttgatggattttgtgggattttctagtaaaattttagcatgaaaaagtctttcatgaaaa 30009697  T
Q  466 catgagatttcttatgattgnnnnnnncttttaagattttacta 509  Q
    |||||||||||||| |||||       |||||||||||||||||    
T  30009696 catgagatttcttaagattgtttttttcttttaagattttacta 30009653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 157; E-Value: 4e-83
Query Start/End: Original strand, 213 - 509
Target Start/End: Complemental strand, 34228854 - 34228559
Alignment:
Q  213 atcatgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnngttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtctt 312  Q
    ||||||| ||||||||||||||||||||||||||||||| ||||||       || | ||||||||||||||| ||||||||||||||       ||| |    
T  34228854 atcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttaaaaaaagtct-gtgttattcaatcaagattctttgtcatttaaaaaaagtcat 34228756  T
Q  313 atggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatgg 412  Q
     |||||||||||||| ||| ||||||||||       ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||    
T  34228755 gtggtattcaatcaaaattcttaatcacttaaaaaaagtctagtggtattcaaaatcattgaaatttcgaatgattgtttaataaatcagattttgatgg 34228656  T
Q  413 attttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttatgattgnnnnnnncttttaagattttacta 509  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||       |||||||||||||||||    
T  34228655 attttgtaggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaagattgtttttttcttttaagattttacta 34228559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 168 - 485
Target Start/End: Original strand, 1112784 - 1113099
Alignment:
Q  168 ggtgtatttgatcatgattctaagggattttaaaagannnnnnnnatcatgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnngt 267  Q
    |||||||| |||||||||||||||  |||||||||||        ||||||| ||||||||||| ||||||||||||||||||||| ||||       ||    
T  1112784 ggtgtattggatcatgattctaag--attttaaaagactttttttatcatgaaaaagtcttgtgttattcaatcaagactctttccgatttaaaaaaagt 1112881  T
Q  268 tttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaa 367  Q
     |||| |||||||||||| ||||||||||||||       ||||| |||||||||||||||| | ||||||||||       ||||||||||||||||||    
T  1112882 attgtattattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaa 1112981  T
Q  368 tcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaaca 467  Q
    ||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| |||||||||||||||||||||||||    
T  1112982 tcattcaaatttcaaatgattgtttaataaatcagattttgatggattttgtgggatttcctagtaaaattttaacatgaaaaagtctttcatgaaaaca 1113081  T
Q  468 tgagatttcttatgattg 485  Q
    |||||||||||| |||||    
T  1113082 tgagatttcttaggattg 1113099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 155; E-Value: 6e-82
Query Start/End: Original strand, 216 - 485
Target Start/End: Original strand, 55302780 - 55303049
Alignment:
Q  216 atgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnngttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatg 315  Q
    |||| ||||| || |||||||||||||||||||||| ||||||       || ||||||| ||||||||| ||||||||||||||       ||| | ||    
T  55302780 atgaaaaagtgttatggtattcaatcaagactcttttcaatttaaaaaaagtcttgtgtttttcaatcaagattctttgtcattttaaaaaagtcatgtg 55302879  T
Q  316 gtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggatt 415  Q
    |||||||||||||| | ||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  55302880 gtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggata 55302979  T
Q  416 ttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttatgattg 485  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  55302980 ttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaagattg 55303049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 167 - 455
Target Start/End: Original strand, 28541587 - 28541874
Alignment:
Q  167 gggtgtatttgatcatgattctaagggattttaaaagannnnnnnnatcatgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnng 266  Q
    ||||||||| ||||||||||||||||||||||||||||        || |||| ||||||||||||||||||||||||||||||| ||||||       |    
T  28541587 gggtgtattggatcatgattctaagggattttaaaagacattttt-attatgaaaaagtcttgtggtattcaatcaagactcttttcaatttaaaaaaag 28541685  T
Q  267 ttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaa 366  Q
    | ||||||||||||||||| ||||||||||||||       ||||  |||||||||||||||| | ||||||||||       |||||||||||||||||    
T  28541686 tcttgtgttattcaatcaagattctttgtcatttaaaaaaagtctcgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaa 28541785  T
Q  367 atcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtct 455  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  28541786 atcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtct 28541874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 167 - 485
Target Start/End: Complemental strand, 37046769 - 37046450
Alignment:
Q  167 gggtgtatttgatcatgattctaagggattttaaaagannnnnnnnatcatgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnng 266  Q
    ||||||||| |||||||||||||||| |||||||||||        ||||| | ||||||||||||||||||||||||||||||| ||||||       |    
T  37046769 gggtgtattggatcatgattctaaggaattttaaaagatattttt-atcataaaaaagtcttgtggtattcaatcaagactcttttcaatttaaaaaaag 37046671  T
Q  267 ttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnn-gtctagtggtattcaa 365  Q
    | ||||||||||||||||| ||||||||||||||       || || |||||||||||||||| | ||||||||||        |||||||| |||| ||    
T  37046670 tcttgtgttattcaatcaagattctttgtcatttaaaaaaagttttgtggtattcaatcaagactcttaatcacttaaaaaaaagtctagtgatatttaa 37046571  T
Q  366 aatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtg-aaattttagcatgaaaaagtctttcatgaaa 464  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  37046570 aatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtggaattttctagtgaaaattttagcatgaaaaagtctttcatgaaa 37046471  T
Q  465 acatgagatttcttatgattg 485  Q
    | ||||||||||||| |||||    
T  37046470 atatgagatttcttaggattg 37046450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 145; E-Value: 5e-76
Query Start/End: Original strand, 166 - 508
Target Start/End: Complemental strand, 39479675 - 39479332
Alignment:
Q  166 ggggtgtatttgatcatgattctaagggattttaaaagannnnnnnnatcatgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnn 265  Q
    |||||||||| |||||||||| ||||  |||||||||||        ||||| | ||||||||||||||||||||||||||||||| ||||||           
T  39479675 ggggtgtattggatcatgattttaagaaattttaaaagactttttt-atcataaaaaagtcttgtggtattcaatcaagactcttttcaatttaaaaaaa 39479577  T
Q  266 gttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnn--gtctagtggtattc 363  Q
    || ||||||||||||||||| |||| |||||||||       ||||| |||||||||||||||| | ||||||||||         | || |||||||||    
T  39479576 gtcttgtgttattcaatcaagattccttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaaagacttgtggtattc 39479477  T
Q  364 aaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaa 463  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  39479476 aaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcaggaaaaagtctttcatgaa 39479377  T
Q  464 aacatgagatttcttatgattgnnnnnnncttttaagattttact 508  Q
    | |||||||||||||| |||||       ||||||||||||||||    
T  39479376 agcatgagatttcttaggattgtttttttcttttaagattttact 39479332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 167 - 509
Target Start/End: Complemental strand, 24131289 - 24130957
Alignment:
Q  167 gggtgtatttgatcatgattctaagggattttaaaagannnnnnnnatcatgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnng 266  Q
    ||||||||| ||||||||||||||||||||||||||||        ||||||| ||||||||||||||||||||||||||||||||||||||       |    
T  24131289 gggtgtattggatcatgattctaagggattttaaaagactttttt-atcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaag 24131191  T
Q  267 ttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaa 366  Q
    | ||||||||||||||||| ||||||||||||||       ||||| |||||||||||||||| | ||||||||||       |||||||||||||||||    
T  24131190 tcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaa 24131091  T
Q  367 atcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatg-aaaaagtctttcatgaaaa 465  Q
              ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| |||||||||||||    
T  24131090 ----------tttcgaatgattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttaggatgaaaaaaatctttcatgaaaa 24131001  T
Q  466 catgagatttcttatgattgnnnnnnncttttaagattttacta 509  Q
    |||||||||||||| |||||       |||||||||||||||||    
T  24131000 catgagatttcttaggattgtttttttcttttaagattttacta 24130957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 140; E-Value: 5e-73
Query Start/End: Original strand, 216 - 485
Target Start/End: Original strand, 7007310 - 7007580
Alignment:
Q  216 atgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnn-gttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttat 314  Q
    |||| ||||| ||||||||||||||||||||||||| ||||||        || ||||||||||||||||| ||||| ||||||||       ||| | |    
T  7007310 atgaaaaagttttgtggtattcaatcaagactcttttcaatttaaaaaaaagtcttgtgttattcaatcaagattctctgtcatttaaaaaaagtcatgt 7007409  T
Q  315 ggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggat 414  Q
    ||||||||||||||| | ||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  7007410 ggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatgaat 7007509  T
Q  415 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttatgattg 485  Q
    ||||||||||||||||||||||||||||||||||||  | ||||||||||||||||||||||||| |||||    
T  7007510 tttgtgggattttctagtgaaattttagcatgaaaatttttttcatgaaaacatgagatttcttaagattg 7007580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 213 - 464
Target Start/End: Complemental strand, 19741180 - 19740929
Alignment:
Q  213 atcatgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnngttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtctt 312  Q
    ||||||| ||| ||||||||||||||||||||||||||||||||||       || ||||||||||||||||| ||||||||||||||       ||| |    
T  19741180 atcatgaaaaaatcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttataaaaagtcat 19741081  T
Q  313 atggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatgg 412  Q
     ||||||||| |||||| | ||||||||||       |||| |||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||    
T  19741080 gtggtattcagtcaagacttttaatcacttaaaaaaagtcttgtggtattaaaaatcattcaaatttcgaaggattgtttaataaattagattttgatgg 19740981  T
Q  413 attttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaa 464  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  19740980 attttgtgggattttctagtgaaattttagcttgaaaaagtctttcatgaaa 19740929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 269 - 478
Target Start/End: Original strand, 12112935 - 12113144
Alignment:
Q  269 ttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaat 368  Q
    ||||||||||||||||| ||||||||||||||       ||||| |||||||||||||| | | ||||||||||       ||||| |||||||||||||    
T  12112935 ttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaaaactcttaatcacttaaaaaaagtctaatggtattcaaaat 12113034  T
Q  369 cattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 468  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  12113035 cattcaaatttcgaaggattgtttaataaatcagattttaatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 12113134  T
Q  469 gagatttctt 478  Q
    ||||||||||    
T  12113135 gagatttctt 12113144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 168 - 485
Target Start/End: Complemental strand, 46635959 - 46635648
Alignment:
Q  168 ggtgtatttgatcatgattctaagggattttaaaagannnnnnnnatcatgataaa-gtcttgtggtattcaatcaagactctttccaatttnnnnnnng 266  Q
    |||||||| ||||||||||||||| ||||||||||||        ||||||| ||| |||||||||||||||||||||||||||||||||||            
T  46635959 ggtgtattggatcatgattctaagagattttaaaagactttttt-atcatgaaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaaa 46635861  T
Q  267 ttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaa 366  Q
    | |||| |||||||||||| ||||||||||||||       ||||| |||||||||||||||| | ||||||||||       || |||| |||||||||    
T  46635860 tcttgtattattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtttagtagtattcaaa 46635761  T
Q  367 atcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaac 466  Q
    ||||||||||||||||||||||||||||||||| |||||      |||||||||||||||| |||||||||||||||||||||||||||||||| |||||    
T  46635760 atcattcaaatttcgaaggattgtttaataaataagatt------gattttgtgggattttttagtgaaattttagcatgaaaaagtctttcataaaaac 46635667  T
Q  467 atgagatttcttatgattg 485  Q
    ||||||||||||| |||||    
T  46635666 atgagatttcttaggattg 46635648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 169 - 508
Target Start/End: Complemental strand, 31315043 - 31314719
Alignment:
Q  169 gtgtatttgatcatgattctaagggattttaaaagannnnnnnnatcatgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnngtt 268  Q
    ||||||| ||||||||||||||||||||||||||||        ||||||| ||||| ||||||||||||||||||||| ||| ||||||       ||     
T  31315043 gtgtattggatcatgattctaagggattttaaaagattttttt-atcatgaaaaagtattgtggtattcaatcaagacttttttcaatttaaaaaaagtc 31314945  T
Q  269 ttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaat 368  Q
    |||||||||| |||||| ||||||||||||||       ||||| ||||||||||    || | ||||||||||       |||||||||||||||||||    
T  31314944 ttgtgttatttaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaa----gactcttaatcacttaaaaaaagtctagtggtattcaaaat 31314849  T
Q  369 cattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 468  Q
    ||||||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31314848 cattcaaatttcgaaggattgtttaataaatcagattttg----------tgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 31314759  T
Q  469 gagatttcttatgattgnnnnnnncttttaagattttact 508  Q
    ||||||||||| |||||       ||||||||||||||||    
T  31314758 gagatttcttaggattgtttttttcttttaagattttact 31314719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 308 - 485
Target Start/End: Original strand, 42786713 - 42786890
Alignment:
Q  308 gtcttatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttt 407  Q
    ||||| |||||||||||||||| | ||||||| ||       |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  42786713 gtcttgtggtattcaatcaagactcttaatcatttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcatatttt 42786812  T
Q  408 gatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttatgattg 485  Q
    |||||||||||||| ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||    
T  42786813 gatggattttgtggaattttctagtgaaattttatcataaaaaagtctttcatgaaaacatgagatttcttatgattg 42786890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 350 - 507
Target Start/End: Original strand, 41320881 - 41321038
Alignment:
Q  350 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 449  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  41320881 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggatgttctagtgaaattttagtatgaaa 41320980  T
Q  450 aagtctttcatgaaaacatgagatttcttatgattgnnnnnnncttttaagattttac 507  Q
    ||||||||||| |||||||||||||||||| |||||       |||||||||||||||    
T  41320981 aagtctttcataaaaacatgagatttcttaagattgattttttcttttaagattttac 41321038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 221 - 509
Target Start/End: Original strand, 3436535 - 3436823
Alignment:
Q  221 aaagtcttgtggtattcaatcaagactctttccaatttnnnnnnngttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtatt 320  Q
    ||||||||||||||||||||||| ||||||| ||||||        | ||||||||||||||||| ||| |||||| |||        |||| || ||||    
T  3436535 aaagtcttgtggtattcaatcaaaactcttttcaatttaaaaaaaatattgtgttattcaatcaagattttttgtcgtttaaaaaaaatcttgtgatatt 3436634  T
Q  321 caatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtg 420  Q
    ||||||||| | ||||||| ||        |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  3436635 caatcaagactcttaatcatttaaaaaaaatctaatggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatgaattttgtg 3436734  T
Q  421 ggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttatgattgnnnnnnncttttaagattttacta 509  Q
    ||||||| ||||||||||||| ||||||||||| |||||||||||||| ||||||||||  ||||       |||||||||||||||||    
T  3436735 ggattttgtagtgaaattttaacatgaaaaagtttttcatgaaaacataagatttcttagaattgtttttttcttttaagattttacta 3436823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 216 - 478
Target Start/End: Original strand, 5441341 - 5441603
Alignment:
Q  216 atgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnngttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatg 315  Q
    |||| ||||||||||||||||||||||||||| ||| ||||||       || ||||| ||||||||||| | ||||||||||||       |||||  |    
T  5441341 atgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgag 5441440  T
Q  316 gtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggatt 415  Q
    |||||||||||||| | || |||| ||       |||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  5441441 gtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggatt 5441540  T
Q  416 ttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 478  Q
    |||||||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||    
T  5441541 ttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 5441603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 216 - 478
Target Start/End: Original strand, 27767993 - 27768255
Alignment:
Q  216 atgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnngttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatg 315  Q
    |||| ||||||||||||||||||||||||| | ||| ||||||       || ||||| ||||||||||| | ||||||||||||       |||||  |    
T  27767993 atgaaaaagtcttgtggtattcaatcaagattttttgcaatttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgag 27768092  T
Q  316 gtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggatt 415  Q
    |||||||||||||| | || |||| ||       |||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  27768093 gtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggatt 27768192  T
Q  416 ttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 478  Q
    |||||||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||    
T  27768193 ttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 27768255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 216 - 478
Target Start/End: Original strand, 54341081 - 54341343
Alignment:
Q  216 atgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnngttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatg 315  Q
    |||| ||||||||||||||||||||||||||| ||| ||||||       || || || ||||||||||| | ||||||||||||       |||||  |    
T  54341081 atgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaagtcttatggtattcaatcaagactctttgtcattttaaaaaagtcttgag 54341180  T
Q  316 gtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggatt 415  Q
    |||||||||||||| | || |||| ||       |||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  54341181 gtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggatt 54341280  T
Q  416 ttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 478  Q
    |||||||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||    
T  54341281 ttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 54341343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 167 - 455
Target Start/End: Complemental strand, 7250090 - 7249795
Alignment:
Q  167 gggtgtatttgatcatgattctaagggattttaaaagannnnnnnnatcatgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnn- 265  Q
    ||||||||| |||||||||||||||| |||||||||||        ||||||| ||| ||||||||||||||||||||||||||| ||||||            
T  7250090 gggtgtattggatcatgattctaaggaattttaaaagactttttt-atcatgaaaaaatcttgtggtattcaatcaagactcttttcaatttaaaaaaaa 7249992  T
Q  266 gttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnn-------gtctagtgg 358  Q
    || ||||||||||||||||| |||||| |||||||        |||| |||||||| ||||||| | || || ||||              |||||||||    
T  7249991 gtcttgtgttattcaatcaagattcttagtcatttaaaaaatatcttgtggtattcgatcaagactcttgataacttaaaaaaaaaaaaaagtctagtgg 7249892  T
Q  359 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtct 455  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7249891 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtct 7249795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 216 - 478
Target Start/End: Complemental strand, 37828671 - 37828409
Alignment:
Q  216 atgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnngttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatg 315  Q
    |||| ||||||||||||||||||||||||||| ||| ||| ||        | ||||| ||||||||||| | ||||||||||||       |||||  |    
T  37828671 atgaaaaagtcttgtggtattcaatcaagactttttgcaaattaaaaaaaatcttgtggtattcaatcaagactctttgtcatttttaaaaagtcttgag 37828572  T
Q  316 gtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggatt 415  Q
    |||||||||||||||| || |||| ||       |||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  37828571 gtattcaatcaagatttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggatt 37828472  T
Q  416 ttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 478  Q
    |||||||||||| ||||| |||||||  | |||||||||||||||||||| ||||||||||||    
T  37828471 ttgtgggattttgtagtgtaattttaaaaagaaaaagtctttcatgaaaagatgagatttctt 37828409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 309 - 456
Target Start/End: Original strand, 25446080 - 25446227
Alignment:
Q  309 tcttatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg 408  Q
    |||| |||||||||||||||| | ||||||||||       |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  25446080 tcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaatgattgtttaataaatcagattttg 25446179  T
Q  409 atggattttgtgggattttctagtgaaattttagcatgaaaaagtctt 456  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  25446180 atggattttgtgggattttttagtgaaattttagcatgaaaaagtctt 25446227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 213 - 441
Target Start/End: Original strand, 23464889 - 23465117
Alignment:
Q  213 atcatgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnngttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtctt 312  Q
    ||||||| |||||||||||||||||||||||||||||||||||| |       || |||| |||||||||||| |||| |||||||||       || ||    
T  23464889 atcatgaaaaagtcttgtggtattcaatcaagactctttccaatataaaaaaagtcttgtattattcaatcaagattccttgtcatttaaaaaaagtttt 23464988  T
Q  313 atggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatgg 412  Q
     |  ||||||||||||| | ||||||||||       |||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  23464989 gtaatattcaatcaagactcttaatcacttaaaataagtctagtggtattcaaaaccattcaaatttcgaaggattgtttaataaatcagaatttgatgg 23465088  T
Q  413 attttgtgggattttctagtgaaatttta 441  Q
    |||||||||||||||||||| ||||||||    
T  23465089 attttgtgggattttctagttaaatttta 23465117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 213 - 428
Target Start/End: Complemental strand, 25504911 - 25504696
Alignment:
Q  213 atcatgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnngttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtctt 312  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||       || ||||||||||||||||| ||||||  ||||||        ||||    
T  25504911 atcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattcttgatcatttaaaaaaattctt 25504812  T
Q  313 atggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatgg 412  Q
     || ||||||||||||| | ||||||||||       ||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25504811 gtgatattcaatcaagactcttaatcacttaaaaaaagtccagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatgg 25504712  T
Q  413 attttgtgggattttc 428  Q
    ||||||||||||||||    
T  25504711 attttgtgggattttc 25504696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 166 - 484
Target Start/End: Complemental strand, 40537463 - 40537161
Alignment:
Q  166 ggggtgtatttgatcatgattctaagggattttaaaagannnnnnnnatcatgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnn 265  Q
    |||||||||| |||||||||| |||||||||||||||||        ||||| | |||||||||||||||||||| ||||||||||| |||||           
T  40537463 ggggtgtattggatcatgattgtaagggattttaaaagacttttgt-atcataaaaaagtcttgtggtattcaattaagactctttctaatttaaaaaaa 40537365  T
Q  266 gttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaa 365  Q
    || ||||||||||||||||| | ||||||||||||       ||||| |||||||||||||| | | ||||||||||       ||     |||||||||    
T  40537364 gtcttgtgttattcaatcaagactctttgtcatttaaaaaaagtcttgtggtattcaatcaaaactcttaatcacttaaaaaatgt-----ggtattcaa 40537270  T
Q  366 aatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 465  Q
    ||||||| |||||||||| |||||||||||||||| |||||||||||||||||||          |||||||||||||||||||||||||||||||||||    
T  40537269 aatcatttaaatttcgaatgattgtttaataaatctgattttgatggattttgtg----------gtgaaattttagcatgaaaaagtctttcatgaaaa 40537180  T
Q  466 catgagatttcttatgatt 484  Q
    |||||||||||||| ||||    
T  40537179 catgagatttcttaggatt 40537161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 269 - 465
Target Start/End: Original strand, 53275829 - 53276025
Alignment:
Q  269 ttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaat 368  Q
    |||||||||||||| || ||| ||||||||||       ||||| | |||||||||||||||| ||||||||||       |||||||| |||| |||||    
T  53275829 ttgtgttattcaataaagattatttgtcatttaaaaaaagtcttgtagtattcaatcaagatttttaatcacttaaaaaaagtctagtgatatttaaaat 53275928  T
Q  369 cattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 465  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||||||||||| ||||    
T  53275929 cattcaaatttcgaaggattgtgtaataaatcagattttgatggattttgtgagattttctaataaaattttagcatgaaaaagtctttcattaaaa 53276025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 227 - 478
Target Start/End: Original strand, 51320869 - 51321120
Alignment:
Q  227 ttgtggtattcaatcaagactctttccaatttnnnnnnngttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatca 326  Q
    ||||||||||||||||||||| ||| ||| ||       |||||||| ||||||||||| | ||||||||||||       |||||  ||||||||||||    
T  51320869 ttgtggtattcaatcaagactttttgcaacttaaaaaaagttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatca 51320968  T
Q  327 agattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattt 426  Q
    ||| | || |||||||       |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||  ||||    
T  51320969 agacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgtaattt 51321068  T
Q  427 tctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 478  Q
    | ||||| ||||||| || |||||||| ||||||||||| ||||||||||||    
T  51321069 tatagtgtaattttaacaagaaaaagtttttcatgaaaagatgagatttctt 51321120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 269 - 485
Target Start/End: Original strand, 9163066 - 9163274
Alignment:
Q  269 ttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaat 368  Q
    ||||| ||||||||||| | ||||||||||||       ||||| |||||||||||||||||| || ||||| |       |||| ||| ||||||||||    
T  9163066 ttgtggtattcaatcaagactctttgtcatttaaaaaaagtcttgtggtattcaatcaagatttttcatcacataaaaaaagtcttgtgatattcaaaat 9163165  T
Q  369 cattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 468  Q
    ||||||||||||||||||||||||||||||| | ||||||||||||||||||| ||||||||||||||||||||||||||        ||||||||||||    
T  9163166 cattcaaatttcgaaggattgtttaataaattaaattttgatggattttgtggaattttctagtgaaattttagcatgaa--------tcatgaaaacat 9163257  T
Q  469 gagatttcttatgattg 485  Q
    |||||||||||||||||    
T  9163258 gagatttcttatgattg 9163274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 221 - 478
Target Start/End: Complemental strand, 54853732 - 54853475
Alignment:
Q  221 aaagtcttgtggtattcaatcaagactctttccaatttnnnnnnngttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtatt 320  Q
    ||||||||||||||||||||||||||| ||| ||| ||       || ||||| ||||||||||| | ||||| ||||||       |||||   |||||    
T  54853732 aaagtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagactctttttcattttaaaaaagtcttgaagtatt 54853633  T
Q  321 caatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtg 420  Q
    ||||||||| | || |||||||       |||| |||||||||||||| ||||||||||| ||||||||||||||||||  |||||||||||||||||||    
T  54853632 caatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaattattcaaatttcaaaggattgtttaataaattggattttgatggattttgtg 54853533  T
Q  421 ggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 478  Q
    ||||||| ||||| ||||||| || |||||| ||||||||||||| ||||||||||||    
T  54853532 ggattttgtagtgtaattttaacaagaaaaaatctttcatgaaaagatgagatttctt 54853475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 353 - 485
Target Start/End: Complemental strand, 27454210 - 27454078
Alignment:
Q  353 tagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaag 452  Q
    ||||||||||||||||||||||||||| ||| |||| |||||||||||||||||||||| ||||||||| |||||||||||||||||| |||||||||||    
T  27454210 tagtggtattcaaaatcattcaaattttgaaagattatttaataaatcagattttgatgaattttgtggaattttctagtgaaattttggcatgaaaaag 27454111  T
Q  453 tctttcatgaaaacatgagatttcttatgattg 485  Q
    |||||||||||||||| | |||| ||| |||||    
T  27454110 tctttcatgaaaacataatatttgttaagattg 27454078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 350 - 478
Target Start/End: Original strand, 48261198 - 48261326
Alignment:
Q  350 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 449  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || ||||    
T  48261198 gtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 48261297  T
Q  450 aagtctttcatgaaaacatgagatttctt 478  Q
    || ||||||||||||| ||||||||||||    
T  48261298 aaatctttcatgaaaatatgagatttctt 48261326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 315 - 478
Target Start/End: Original strand, 32322127 - 32322290
Alignment:
Q  315 ggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggat 414  Q
    ||||||||||||||||| || |||||||       |||| |||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||    
T  32322127 ggtattcaatcaagatttttcatcacttaaaaatagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgaattttgatggat 32322226  T
Q  415 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 478  Q
    ||||||||||||| ||||| |||||||  | ||||| ||||||||| |||| ||||||||||||    
T  32322227 tttgtgggattttgtagtgtaattttaataagaaaatgtctttcataaaaagatgagatttctt 32322290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 356 - 476
Target Start/End: Complemental strand, 44770982 - 44770862
Alignment:
Q  356 tggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtct 455  Q
    |||||||||||||||||||||||| |||||||||||||||||||  ||||||| ||||||||||||||||||||||||||||||||  | ||||||||||    
T  44770982 tggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttggtggattttgtgggattttctagtgaaattttaagaagaaaaagtct 44770883  T
Q  456 ttcatgaaaacatgagatttc 476  Q
    |||||||  ||||||||||||    
T  44770882 ttcatgacgacatgagatttc 44770862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 315 - 475
Target Start/End: Original strand, 37915863 - 37916023
Alignment:
Q  315 ggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggat 414  Q
    ||||||||||||||| | || |||||||       |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  37915863 ggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggat 37915962  T
Q  415 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagattt 475  Q
    ||||||||||||| ||||| | ||||| || ||||||||| |||||||||| || ||||||    
T  37915963 tttgtgggattttgtagtgtacttttaacaagaaaaagtcattcatgaaaagataagattt 37916023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 216 - 478
Target Start/End: Complemental strand, 30967568 - 30967316
Alignment:
Q  216 atgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnngttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatg 315  Q
    |||| ||||||||||||||||||||||||||| ||| ||||||       || ||||| ||||||||||| | ||||||||||||       || ||  |    
T  30967568 atgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagttttgag 30967469  T
Q  316 gtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggatt 415  Q
    |||||||||||||||| || |||||||       |||| |||||||||||||||||||||||||| ||||||||||||||||||          ||||||    
T  30967468 gtattcaatcaagatttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcaaaggattgtttaataaat----------tggatt 30967379  T
Q  416 ttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 478  Q
    |||||||||||| ||||| ||||||| || |||||| ||||||||||||| || |||||||||    
T  30967378 ttgtgggattttgtagtgtaattttaacaagaaaaaatctttcatgaaaaaataagatttctt 30967316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 266 - 479
Target Start/End: Complemental strand, 39307472 - 39307259
Alignment:
Q  266 gttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaa 365  Q
    |||||||| ||||||||||| ||| |||| |||||       ||||| |||||||||||||||||| || |||| ||       |||| ||||||||||     
T  39307472 gttttgtggtattcaatcaagattttttgccattttaaaaaagtcttgtggtattcaatcaagattcttcatcatttaaaaaaagtcttgtggtattcat 39307373  T
Q  366 aatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 465  Q
    ||||||||||||||| || |||| |||||| |||    |||||||| ||||||||||||||||||||||||||||| ||||||||||| | | || ||||    
T  39307372 aatcattcaaatttctaaagattatttaatgaattgagttttgatgaattttgtgggattttctagtgaaattttaacatgaaaaagtttctgataaaaa 39307273  T
Q  466 catgagatttctta 479  Q
    ||||||||||||||    
T  39307272 catgagatttctta 39307259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 269 - 478
Target Start/End: Original strand, 23987204 - 23987403
Alignment:
Q  269 ttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaat 368  Q
    ||||| ||||||||||| | ||||||||||||       |||||  ||||||||||||| | | || |||||||       |||| ||||||||||||||    
T  23987204 ttgtggtattcaatcaatactctttgtcattttaaaaaagtcttgaggtattcaatcaaaacttttcatcacttaaaaaaagtcttgtggtattcaaaat 23987303  T
Q  369 cattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 468  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||          ||||| ||||||| || |||||||||||||||||||| ||    
T  23987304 cattcaaatttcgaaggattgtttaataaattagattttgatggattttg----------tagtgtaattttaacaagaaaaagtctttcatgaaaagat 23987393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 269 - 478
Target Start/End: Complemental strand, 36479447 - 36479249
Alignment:
Q  269 ttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaat 368  Q
    ||||| ||||||||||||| ||||||||||||       |||||  |||||||||| |||||| || |||||||       |||| ||||||||||||||    
T  36479447 ttgtggtattcaatcaaaactctttgtcattttaaaaaagtcttgaggtattcaattaagatttttcatcacttaaaaaaagtctcgtggtattcaaaat 36479348  T
Q  369 cattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 468  Q
     ||||||||||||||||||| ||||||||||  ||||||||||||||||           ||||||||||||||||  ||||||||||| ||||||||||    
T  36479347 tattcaaatttcgaaggattatttaataaattggattttgatggatttt-----------tagtgaaattttagcaaaaaaaagtcttttatgaaaacat 36479259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 221 - 478
Target Start/End: Original strand, 12913165 - 12913413
Alignment:
Q  221 aaagtcttgtggtattcaatcaagactctttccaatttnnnnnnn-gttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtat 319  Q
    |||||||||||||||||||||||||||||||  |||||        || ||||| |||| ||| || | ||||||||||||       |||||  |||||    
T  12913165 aaagtcttgtggtattcaatcaagactctttataatttaaaaaaaagtcttgtggtatttaattaagactctttgtcattttaaaaaagtcttgaggtat 12913264  T
Q  320 tcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgt 419  Q
    ||||||||| || || |||| ||       ||||  |||||||||||||||||||||||| |||||||||||||||||||          ||||||||||    
T  12913265 tcaatcaagctttttcatcatttaaaaaaagtctcatggtattcaaaatcattcaaattttgaaggattgtttaataaat----------tggattttgt 12913354  T
Q  420 gggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 478  Q
    |||||||||||||||||||||| || |||||||| ||||||||| ||||||||||||||    
T  12913355 gggattttctagtgaaattttaacaagaaaaagtatttcatgaagacatgagatttctt 12913413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 391 - 478
Target Start/End: Original strand, 8711978 - 8712065
Alignment:
Q  391 ttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 478  Q
    |||||||||  |||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  8711978 ttaataaattggattttgatggattttgtgggattttatagtgaaattttagcaagaaaaagtctttcatcaaaacatgagatttctt 8712065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 356 - 478
Target Start/End: Complemental strand, 56445474 - 56445362
Alignment:
Q  356 tggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtct 455  Q
    |||||||||||||||||||||||||||| |||||||||||||||          ||||||||||||||||||||||||||| ||||||| ||||||||||    
T  56445474 tggtattcaaaatcattcaaatttcgaatgattgtttaataaat----------tggattttgtgggattttctagtgaaactttagcaagaaaaagtct 56445385  T
Q  456 ttcatgaaaacatgagatttctt 478  Q
    ||||| || ||||||||||||||    
T  56445384 ttcataaagacatgagatttctt 56445362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 391 - 485
Target Start/End: Original strand, 24736447 - 24736541
Alignment:
Q  391 ttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttatgattg 485  Q
    |||||||||  ||||||||||||||||||| |||||||||||||||||||| || ||| ||||||||||||||||||||||||||||| ||||||    
T  24736447 ttaataaattggattttgatggattttgtgagattttctagtgaaattttaacaagaagaagtctttcatgaaaacatgagatttcttgtgattg 24736541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 216 - 421
Target Start/End: Complemental strand, 29649936 - 29649731
Alignment:
Q  216 atgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnngttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatg 315  Q
    |||| ||||| ||||||||||||||||||||| ||| ||||||       || ||||| ||||  || |||| ||||||||||||       |||||  |    
T  29649936 atgaaaaagttttgtggtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattagattaaaactctttgtcattttaaaaaagtcttgag 29649837  T
Q  316 gtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggatt 415  Q
    |||||||||||||| | || |||||||       |||| ||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||    
T  29649836 gtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaagattgtttaataaattggattttgatggatt 29649737  T
Q  416 ttgtgg 421  Q
    ||||||    
T  29649736 ttgtgg 29649731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 350 - 478
Target Start/End: Original strand, 41725196 - 41725321
Alignment:
Q  350 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 449  Q
    |||| ||| ||||||||||||||||||||| ||||||||||||||   ||  |||||||||| ||||||||||||||| ||||| ||||||| || ||||    
T  41725196 gtcttgtgatattcaaaatcattcaaattttgaaggattgtttaa---attggattttgatgaattttgtgggattttatagtgtaattttaacaagaaa 41725292  T
Q  450 aagtctttcatgaaaacatgagatttctt 478  Q
    || ||||||||||||| ||||||||||||    
T  41725293 aaatctttcatgaaaagatgagatttctt 41725321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 356 - 441
Target Start/End: Original strand, 28371001 - 28371086
Alignment:
Q  356 tggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttta 441  Q
    ||||||||||||||||||||||||  ||||||||||||||||||   |||||| || |||||||||||||||||||||||||||||    
T  28371001 tggtattcaaaatcattcaaattttaaaggattgtttaataaattgaattttggtgaattttgtgggattttctagtgaaatttta 28371086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 216 - 408
Target Start/End: Complemental strand, 49835082 - 49834890
Alignment:
Q  216 atgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnngttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatg 315  Q
    |||| ||||||||||||||||||||||| ||| ||| ||| ||       || ||||| ||||||||||| | ||||||||||||       | |||  |    
T  49835082 atgaaaaagtcttgtggtattcaatcaaaactttttgcaacttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaacaaaggcttgag 49834983  T
Q  316 gtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg 408  Q
    |||||||||||||| | || |||||||       |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  49834982 gtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 49834890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 410 - 485
Target Start/End: Original strand, 11090435 - 11090510
Alignment:
Q  410 tggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttatgattg 485  Q
    |||||||||||||||||| ||||||||||||||||| ||||||||||| || |||||||||||||||||| |||||    
T  11090435 tggattttgtgggattttttagtgaaattttagcattaaaaagtctttaataaaaacatgagatttcttaggattg 11090510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 315 - 484
Target Start/End: Original strand, 28483935 - 28484093
Alignment:
Q  315 ggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggat 414  Q
    ||||||||||||||| | || |||||||       |||| |||||||||||||||||||||||||||||||||| ||||||||||          |||||    
T  28483935 ggtattcaatcaagacttttcatcacttaaaaaaagtctcgtggtattcaaaatcattcaaatttcgaaggattatttaataaat----------tggat 28484024  T
Q  415 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttatgatt 484  Q
    ||||| ||||||| ||||| || |||| || |||||||||||||||||||| | ||||||||||| ||||    
T  28484025 tttgtaggattttgtagtgtaa-tttaacaagaaaaagtctttcatgaaaagacgagatttcttaagatt 28484093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 166 - 250
Target Start/End: Original strand, 42786655 - 42786739
Alignment:
Q  166 ggggtgtatttgatcatgattctaagggattttaaaagannnnnnnnatcatgataaagtcttgtggtattcaatcaagactctt 250  Q
    |||||||||| ||||||||||||||||||||||||||||        ||||||| ||||||||||||||||||||||||||||||    
T  42786655 ggggtgtattggatcatgattctaagggattttaaaagactttttttatcatgaaaaagtcttgtggtattcaatcaagactctt 42786739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 350 - 479
Target Start/End: Complemental strand, 41581923 - 41581795
Alignment:
Q  350 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatg-aa 448  Q
    |||| |||||||| | | |||||||||||| |||  ||||||||||||||  ||||  |||  ||||||||||||||||||||||||||||| |||| ||    
T  41581923 gtctcgtggtatttagagtcattcaaattttgaataattgtttaataaattggatt--gatatattttgtgggattttctagtgaaattttaacatgaaa 41581826  T
Q  449 aaagtctttcatgaaaacatgagatttctta 479  Q
    ||| | ||||||| |||||||||||||||||    
T  41581825 aaaatatttcatgtaaacatgagatttctta 41581795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 221 - 475
Target Start/End: Original strand, 50018193 - 50018437
Alignment:
Q  221 aaagtcttgtggtattcaatcaagactctttccaatttnnnnnnngttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtatt 320  Q
    ||||||||||||||||||||||||||| ||| ||||||       || || || ||||||||||| | ||||||||||||       |||||  ||||||    
T  50018193 aaagtcttgtggtattcaatcaagactttttacaatttaaaaaaagtcttatggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtatt 50018292  T
Q  321 caatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtg 420  Q
    | ||||||| | ||  ||| ||       |||| ||||||||||| ||||||||||||| |||||||||||||||||||   ||||| ||||||||||      
T  50018293 ccatcaagacttttcttcatttaaaaaaagtcttgtggtattcaagatcattcaaattttgaaggattgtttaataaattgaattttaatggattttg-- 50018390  T
Q  421 ggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagattt 475  Q
            ||||| ||||||| || |||||||||||||| ||||| |||||||||    
T  50018391 --------tagtgtaattttaacaagaaaaagtctttcaagaaaagatgagattt 50018437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 370 - 476
Target Start/End: Original strand, 20021424 - 20021531
Alignment:
Q  370 attcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagc-atgaaaaagtctttcatgaaaacat 468  Q
    ||||||||||  |||||||||||||||||| |||||||| |||||||| ||||||||| || |||||||||| | |  ||||| ||||||||||| ||||    
T  20021424 attcaaattttaaaggattgtttaataaattagattttgctggattttatgggattttttaatgaaattttaacaaaaaaaaaatctttcatgaagacat 20021523  T
Q  469 gagatttc 476  Q
     |||||||    
T  20021524 aagatttc 20021531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 350 - 475
Target Start/End: Original strand, 5800049 - 5800164
Alignment:
Q  350 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 449  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||||||          ||||||||||| |||||| ||| | ||||||| || ||||    
T  5800049 gtcttgtggtattcaaaatcattcaaatttcaaaggattgtttaataaat----------tggattttgtgagattttgtagagtaattttaacaagaaa 5800138  T
Q  450 aagtctttcatgaaaacatgagattt 475  Q
    |||||||| ||||||| || ||||||    
T  5800139 aagtctttaatgaaaagataagattt 5800164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 350 - 408
Target Start/End: Complemental strand, 32684123 - 32684065
Alignment:
Q  350 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg 408  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  32684123 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 32684065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 315 - 478
Target Start/End: Complemental strand, 49501681 - 49501526
Alignment:
Q  315 ggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggat 414  Q
    ||||||||||||||| | || |||||||       |||| |||| |||||||||||||||||||||||| |||||||||||||||          |||||    
T  49501681 ggtattcaatcaagacttttcatcacttaaaaaatgtcttgtggcattcaaaatcattcaaatttcgaatgattgtttaataaat----------tggat 49501592  T
Q  415 tttgtgggattttctagtgaaattttagcatgaaaaagtctttc--atgaaaacatgagatttctt 478  Q
    ||||||| ||||| ||||| ||||||| || |||||||||||||  || |||| ||||||||||||    
T  49501591 tttgtggaattttgtagtgtaattttaacaagaaaaagtctttcatataaaaagatgagatttctt 49501526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 315 - 478
Target Start/End: Complemental strand, 49507746 - 49507591
Alignment:
Q  315 ggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggat 414  Q
    ||||||||||||||| | || |||||||       |||| |||| |||||||||||||||||||||||| |||||||||||||||          |||||    
T  49507746 ggtattcaatcaagacttttcatcacttaaaaaatgtcttgtggcattcaaaatcattcaaatttcgaatgattgtttaataaat----------tggat 49507657  T
Q  415 tttgtgggattttctagtgaaattttagcatgaaaaagtctttc--atgaaaacatgagatttctt 478  Q
    ||||||| ||||| ||||| ||||||| || |||||||||||||  || |||| ||||||||||||    
T  49507656 tttgtggaattttgtagtgtaattttaacaagaaaaagtctttcatataaaaagatgagatttctt 49507591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 216 - 300
Target Start/End: Original strand, 20021281 - 20021365
Alignment:
Q  216 atgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnngttttgtgttattcaatcaaaattctttgtcattt 300  Q
    |||| |||||||||||||||| |||||||||||||| ||||||       |||||||| ||||||||||| ||||||||||||||    
T  20021281 atgaaaaagtcttgtggtatttaatcaagactctttgcaatttaaaaaaagttttgtggtattcaatcaagattctttgtcattt 20021365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 166 - 300
Target Start/End: Original strand, 41320638 - 41320769
Alignment:
Q  166 ggggtgtatttgatcatgattctaagggattttaaaagannnnnnnnatcatgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnn 265  Q
    |||||||||| ||||||||||||||  ||||||||||||        || |||| ||||||  ||||||||||||||||||| ||||||||||           
T  41320638 ggggtgtattggatcatgattctaaaagattttaaaagattttttt-attatgaaaaagtc--gtggtattcaatcaagactgtttccaatttaaaaaat 41320734  T
Q  266 gttttgtgttattcaatcaaaattctttgtcattt 300  Q
    || ||||||||||||||||| ||||||||||||||    
T  41320735 gtcttgtgttattcaatcaagattctttgtcattt 41320769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 411 - 475
Target Start/End: Complemental strand, 36728023 - 36727960
Alignment:
Q  411 ggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagattt 475  Q
    ||||||||| ||||||| ||||||||||||| || |||||| ||||||||| | |||||||||||    
T  36728023 ggattttgtaggattttttagtgaaattttaacaagaaaaaatctttcatg-agacatgagattt 36727960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 222 - 258
Target Start/End: Original strand, 49469264 - 49469300
Alignment:
Q  222 aagtcttgtggtattcaatcaagactctttccaattt 258  Q
    ||||||||||||||| |||||||||||||||||||||    
T  49469264 aagtcttgtggtatttaatcaagactctttccaattt 49469300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 221 - 251
Target Start/End: Original strand, 9163060 - 9163090
Alignment:
Q  221 aaagtcttgtggtattcaatcaagactcttt 251  Q
    |||||||||||||||||||||||||||||||    
T  9163060 aaagtcttgtggtattcaatcaagactcttt 9163090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 429 - 475
Target Start/End: Complemental strand, 32684064 - 32684018
Alignment:
Q  429 tagtgaaattttagcatgaaaaagtctttcatgaaaacatgagattt 475  Q
    ||||| ||||||| || |||||||||||||||||||| |||||||||    
T  32684064 tagtgtaattttaacaagaaaaagtctttcatgaaaagatgagattt 32684018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 221 - 251
Target Start/End: Original strand, 41320804 - 41320834
Alignment:
Q  221 aaagtcttgtggtattcaatcaagactcttt 251  Q
    |||||||||||||||||||||||||||||||    
T  41320804 aaagtcttgtggtattcaatcaagactcttt 41320834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 444 - 477
Target Start/End: Complemental strand, 55047674 - 55047641
Alignment:
Q  444 atgaaaaagtctttcatgaaaacatgagatttct 477  Q
    ||||||||||||||||||||||||||| ||||||    
T  55047674 atgaaaaagtctttcatgaaaacatgatatttct 55047641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 385 - 477
Target Start/End: Original strand, 12193135 - 12193227
Alignment:
Q  385 gattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttct 477  Q
    ||||||||||||| |   |||||| |||||||||||||| | | ||||||| ||| ||||| ||||| |||| ||| ||||||  ||||||||    
T  12193135 gattgtttaataagttgaattttggtggattttgtgggaatatttagtgaattttcagcataaaaaaatcttacattaaaacacaagatttct 12193227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 221 - 249
Target Start/End: Original strand, 37915811 - 37915839
Alignment:
Q  221 aaagtcttgtggtattcaatcaagactct 249  Q
    |||||||||||||||||||||||||||||    
T  37915811 aaagtcttgtggtattcaatcaagactct 37915839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 179; Significance: 3e-96; HSPs: 57)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 179; E-Value: 3e-96
Query Start/End: Original strand, 165 - 479
Target Start/End: Original strand, 35279553 - 35279866
Alignment:
Q  165 aggggtgtatttgatcatgattctaagggattttaaaagannnnnnnnatcatgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnn 264  Q
    ||||||||||| ||||||||||||||| ||||||||||||        ||||||| ||||||||||||||||||||||||||||||||||||||          
T  35279553 aggggtgtattggatcatgattctaagagattttaaaagactttttt-atcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaa 35279651  T
Q  265 ngttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattca 364  Q
     |  ||||||||||||||||| ||||||||||||||       ||||| |||||||||||||||| ||||||||||||       |||||||||||||||    
T  35279652 agacttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactattaatcacttaaaaaaagtctagtggtattca 35279751  T
Q  365 aaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaa 464  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  35279752 aaatcatttaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttcaacatgaaaaagtctttcatgaaa 35279851  T
Q  465 acatgagatttctta 479  Q
    |||||||||||||||    
T  35279852 acatgagatttctta 35279866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 177; E-Value: 4e-95
Query Start/End: Original strand, 221 - 509
Target Start/End: Complemental strand, 19452072 - 19451784
Alignment:
Q  221 aaagtcttgtggtattcaatcaagactctttccaatttnnnnnnngttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtatt 320  Q
    ||||||||||||||||||||||||||||||||||||||       || ||||||||||||||||| ||||||||||||||       ||||| |||||||    
T  19452072 aaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtatt 19451973  T
Q  321 caatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtg 420  Q
     |||||||| | ||||||||||       |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  19451972 taatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggatcgtttaataaatcagattttgatggattttgtg 19451873  T
Q  421 ggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttatgattgnnnnnnncttttaagattttacta 509  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||    
T  19451872 ggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttatgattgtttttttcttttaagattttacta 19451784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 176; E-Value: 2e-94
Query Start/End: Original strand, 166 - 509
Target Start/End: Original strand, 21222030 - 21222371
Alignment:
Q  166 ggggtgtatttgatcatgattctaagggattttaaaagannnnnnnnatcatgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnn 265  Q
    |||||||||| |||||||||||||||||||||||||||         ||||||| ||||||||||||||||||||||||||||||| ||||||           
T  21222030 ggggtgtattggatcatgattctaagggattttaaaag-gcttttttatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttaaaaaaa 21222128  T
Q  266 gttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaa 365  Q
    |||| ||||||||||||||| ||||||||||||||       ||||| |||||||||||||||| | ||||||||||       |||||| |||||||||    
T  21222129 gttt-gtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagaggtattcaa 21222227  T
Q  366 aatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 465  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  21222228 aatcattcaaatttcgaaggattgtttaataaataagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtctttcatgaaaa 21222327  T
Q  466 catgagatttcttatgattgnnnnnnncttttaagattttacta 509  Q
    |||||||||||||| |||||       |||||||||||||||||    
T  21222328 catgagatttcttaggattgttattttcttttaagattttacta 21222371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 168; E-Value: 1e-89
Query Start/End: Original strand, 166 - 509
Target Start/End: Complemental strand, 45760328 - 45759985
Alignment:
Q  166 ggggtgtatttgatcatgattctaagggattttaaaagannnnnnnnatcatgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnn 265  Q
    |||||||||| ||||||||||||||||||||||||||||        ||||||| ||||||||||||||||||||||| ||||||| ||||||           
T  45760328 ggggtgtattggatcatgattctaagggattttaaaagattttttt-atcatgaaaaagtcttgtggtattcaatcaaaactcttttcaatttaaaaaaa 45760230  T
Q  266 gttttgtgttattcaatcaaaattctttgtca-tttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattca 364  Q
    || ||||||||||||||||| ||||||||||| |||       ||| | |||||||||||||||| | ||||||||||       |||||||||||||||    
T  45760229 gtcttgtgttattcaatcaagattctttgtcaatttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattca 45760130  T
Q  365 aaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaa 464  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||    
T  45760129 aaatcattcaaacttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtatttgatgaaa 45760030  T
Q  465 acatgagatttcttatgattgnnnnnnncttttaagattttacta 509  Q
    ||||||||||||||| |||||       |||||||||||||||||    
T  45760029 acatgagatttcttaggattgtttttttcttttaagattttacta 45759985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 167; E-Value: 4e-89
Query Start/End: Original strand, 169 - 509
Target Start/End: Complemental strand, 47654669 - 47654327
Alignment:
Q  169 gtgtatttgatcatgattctaagggattttaaaagannnnnnnnatcatgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnngt- 267  Q
    ||||||| ||||||||||||||||||||||||||||        ||||||| ||||||||||||||||| ||||||||||||||||||||       ||     
T  47654669 gtgtattggatcatgattctaagggattttaaaagactttttttatcatgaaaaagtcttgtggtattcgatcaagactctttccaatttaaaaaaagtc 47654570  T
Q  268 tttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnn-gtctagtggtattcaaa 366  Q
    |||||||||||||||||| ||||||||||||||       ||||| |||||||||||||| | | ||||||||||        |||||||||||||||||    
T  47654569 tttgtgttattcaatcaagattctttgtcatttaaaagaagtcttgtggtattcaatcaaaactcttaatcacttaaaaaaaagtctagtggtattcaaa 47654470  T
Q  367 atcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaac 466  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||    
T  47654469 attattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtggaattttctagggaaattttagcatgaaaaagtatttcatgaaaac 47654370  T
Q  467 atgagatttcttatgattgnnnnnnncttttaagattttacta 509  Q
    ||||||||||||| |||||       |||||||||||||||||    
T  47654369 atgagatttcttaggattgtttttttcttttaagattttacta 47654327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 165; E-Value: 6e-88
Query Start/End: Original strand, 163 - 509
Target Start/End: Complemental strand, 49198588 - 49198245
Alignment:
Q  163 ttaggggtgtatttgatcatgattctaagggattttaaaagannnnnnnnatcatgataaagtcttgtggtattcaatcaagactctttccaatttnnnn 262  Q
    ||||||||||||| |||||||||||||||| |||||||||||        ||||||| ||||||||||||||||||||||||||||||| ||||||        
T  49198588 ttaggggtgtattggatcatgattctaaggaattttaaaagactttttt-atcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttaaaa 49198490  T
Q  263 nnngttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtatt 362  Q
       || ||||||||||||||||| ||||||||||||||       || || ||||||||||| |||| | ||||||||||       ||  |||||||||    
T  49198489 aa-gtcttgtgttattcaatcaagattctttgtcatttaaaaaaagttttgtggtattcaat-aagactcttaatcacttaaaaaaagttcagtggtatt 49198392  T
Q  363 caaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatga 462  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49198391 caaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatga 49198292  T
Q  463 aaacatgagatttcttatgattgnnnnnnncttttaagattttacta 509  Q
    |||||||| |||||||| |||||       |||||||||||||||||    
T  49198291 aaacatgatatttcttaggattgtttttttcttttaagattttacta 49198245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 163; E-Value: 1e-86
Query Start/End: Original strand, 166 - 509
Target Start/End: Complemental strand, 28824690 - 28824349
Alignment:
Q  166 ggggtgtatttgatcatgattctaagggattttaaaagannnnnnnnatcatgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnn 265  Q
    |||||||||| ||||||||||||||||||||||||||||        ||||||| |||||||||||||||||||||||||||||||| |||||           
T  28824690 ggggtgtattggatcatgattctaagggattttaaaagactttttt-atcatgaaaaagtcttgtggtattcaatcaagactctttctaatttaaaaaaa 28824592  T
Q  266 gttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaa 365  Q
    || ||||||||||||||||| ||| ||||||||||       ||||| |||||||||||||||| | ||||||||||       |||| |||||||||||    
T  28824591 gtcttgtgttattcaatcaagattatttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaacagtcttgtggtattcaa 28824492  T
Q  366 aatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 465  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| || ||||    
T  28824491 aatcattcaaatttcgaag-attgtttaataaatcagattttgatggattttgtgggattttctagggaaattttaacatgaaaaagtcttttataaaaa 28824393  T
Q  466 catgagatttcttatgattgnnnnnnncttttaagattttacta 509  Q
    |||||||||||||| |||||       |||||||||||||||||    
T  28824392 catgagatttcttaggattgtttttttcttttaagattttacta 28824349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 160; E-Value: 6e-85
Query Start/End: Original strand, 166 - 509
Target Start/End: Complemental strand, 50192869 - 50192526
Alignment:
Q  166 ggggtgtatttgatcatgattctaagggattttaaaagannnnnnnnatcatgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnn 265  Q
    ||||||||||  ||||||||||||||| |||||||||||        || |||| ||||||||||||||||||||||||| ||||||||||||           
T  50192869 ggggtgtattgaatcatgattctaaggaattttaaaagactttttt-attatgaaaaagtcttgtggtattcaatcaagattctttccaatttaaaaaaa 50192771  T
Q  266 gttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnn-gtctagtggtattca 364  Q
     | ||||||||||||||||| |||| |||||||||       ||||| |||||||||||||||| | ||||||||||        |||||||||||||||    
T  50192770 atcttgtgttattcaatcaagattccttgtcattttaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaagtctagtggtattca 50192671  T
Q  365 aaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaa 464  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50192670 aaatcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaa 50192571  T
Q  465 acatgagatttcttatgattgnnnnnnncttttaagattttacta 509  Q
    ||||||||||| ||| |||||       |||||||||||||||||    
T  50192570 acatgagattttttaggattgtttttttcttttaagattttacta 50192526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 166 - 485
Target Start/End: Complemental strand, 6304572 - 6304252
Alignment:
Q  166 ggggtgtatttgatcatgattctaagggattttaaaagannnnnnnnatcatgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnn 265  Q
    |||||||||| |||||||||||||| |||||||||||||         |||||| ||||||||||||||||||||||||||| ||||||||||           
T  6304572 ggggtgtattggatcatgattctaaaggattttaaaagacttttttt-tcatgaaaaagtcttgtggtattcaatcaagactatttccaatttaaaaaaa 6304474  T
Q  266 -gttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagat-tattaatcacttnnnnnnngtctagtggtattc 363  Q
     ||  |||||||||||||||| ||||||||||||||       ||||| |||||||||| ||| |  | ||||||||||       ||||||||||||||    
T  6304473 agtactgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaaccaaaaactcttaatcacttaaaaaaagtctagtggtattc 6304374  T
Q  364 aaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaa 463  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6304373 aaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaa 6304274  T
Q  464 aacatgagatttcttatgattg 485  Q
    ||||||| ||||||||||||||    
T  6304273 aacatgaaatttcttatgattg 6304252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 143; E-Value: 8e-75
Query Start/End: Original strand, 166 - 450
Target Start/End: Original strand, 730031 - 730314
Alignment:
Q  166 ggggtgtatttgatcatgattctaagggattttaaaagannnnnnnnatcatgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnn 265  Q
    |||||||||| ||||||||||||||||||||||||||||         |||||| ||||||||||||||||||||||||||||||||||||||           
T  730031 ggggtgtattggatcatgattctaagggattttaaaagactttttt--tcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaa 730128  T
Q  266 gttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnn-gtctagtggtattca 364  Q
    || ||||||||||||||||| ||||||||||||||       ||||| |||||||||||||||| | ||||||||||        |||||||||||||||    
T  730129 gtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaagtctagtggtattca 730228  T
Q  365 aaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaa 450  Q
    |||||||||||||||||| | ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  730229 aaatcattcaaatttcgacgaattgtttaataaatcagattttgatggattttgtgagattttctagtgaaattttagcatgaaaa 730314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 143; E-Value: 8e-75
Query Start/End: Original strand, 167 - 485
Target Start/End: Complemental strand, 35679445 - 35679128
Alignment:
Q  167 gggtgtatttgatcatgattctaagggattttaaaagannnnnnnnatcatgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnng 266  Q
    |||||||||  ||||||||| |||||||||||||||||        || |||| |||||||||||||||||||||||| |||||| ||||||       |    
T  35679445 gggtgtattgaatcatgattttaagggattttaaaagactttttt-ataatgaaaaagtcttgtggtattcaatcaaggctcttttcaatttaaaaaaag 35679347  T
Q  267 ttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaa 366  Q
    | ||||| ||||||||||| ||||||||||||||        |||| | |||||||||||||| | ||||||||||       |||  ||||||||||||    
T  35679346 tcttgtggtattcaatcaagattctttgtcatttaaaaaaaatcttgtagtattcaatcaagactcttaatcacttaaaaaaagtcatgtggtattcaaa 35679247  T
Q  367 atcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaac 466  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||| ||    
T  35679246 atcattcaaatttcgaaggattgtttaataaatcagattttgatggatttgatgggattttctagtgaaattttagcatgaaaaagtctttcatgaagac 35679147  T
Q  467 atgagatttcttatgattg 485  Q
    ||||||||||||| |||||    
T  35679146 atgagatttcttaagattg 35679128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 166 - 479
Target Start/End: Original strand, 49417966 - 49418278
Alignment:
Q  166 ggggtgtatttgatcatgattctaagggattttaaaagannnnnnnnatcatgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnn 265  Q
    ||||| |||| ||||||||||||||| ||||||||||||        ||||||| |||||| |||| ||||||||||||||||||||||||||           
T  49417966 ggggtatattggatcatgattctaagagattttaaaagactttttt-atcatgaaaaagtcatgtgatattcaatcaagactctttccaatttagaaaaa 49418064  T
Q  266 gttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaa 365  Q
    || ||||||||||||||||| |||| |||||||||        |  | ||||||||||| |||| | ||||||||||       ||||||||||||||||    
T  49418065 gtcttgtgttattcaatcaagattcattgtcatttaaaaaaaattatgtggtattcaattaagactcttaatcacttaaaaaaagtctagtggtattcaa 49418164  T
Q  366 aatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 465  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||    
T  49418165 aatcattcaaatttcaaaggattgtttaataaatcagattttgatggattttgtgggattttctattgaaattttagcatgaaaaaatctttcatgaaaa 49418264  T
Q  466 catgagatttctta 479  Q
     |||||||||||||    
T  49418265 tatgagatttctta 49418278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 227 - 466
Target Start/End: Original strand, 45535886 - 45536125
Alignment:
Q  227 ttgtggtattcaatcaagactctttccaatttnnnnnnngttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatca 326  Q
    ||||| ||||||||||||||||||||||||||       || ||||||||||||||||| ||||||||||||||       || || |||||||||||||    
T  45535886 ttgtgatattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaatattctttgtcatttaaacaaagtgttgtggtattcaatca 45535985  T
Q  327 agattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattt 426  Q
    ||| | |||||| |||       |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  45535986 agactcttaatcgcttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaagattgtttaataaatcagattttgatggattttgtgggattt 45536085  T
Q  427 tctagtgaaattttagcatgaaaaagtctttcatgaaaac 466  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  45536086 tctagtgaaattttagcatgaaaaagtctttcatgaaaac 45536125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 221 - 509
Target Start/End: Original strand, 47780646 - 47780935
Alignment:
Q  221 aaagtcttgtggtattcaatcaagactctttccaatttnnnnnnn-gttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtat 319  Q
    ||||||||||| ||||||||||||||||||| ||||||        || ||||||||||||||||| ||| | ||||||||       ||| | ||||||    
T  47780646 aaagtcttgtgttattcaatcaagactcttttcaatttaaaaaaaagtcttgtgttattcaatcaagattatatgtcatttaaaaaaagtcatgtggtat 47780745  T
Q  320 tcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgt 419  Q
    |||||||||| | ||||||||||       |||||||| |||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||    
T  47780746 tcaatcaagactcttaatcacttaaaaaaagtctagtgatattcaaaatcattcaaaattaaaaggattgtttaataaatcagattttgatggattttgt 47780845  T
Q  420 gggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttatgattgnnnnnnncttttaagattttacta 509  Q
    |||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||| |||||       |||||||||||||||||    
T  47780846 gggattttctagtgaaattttaacatgaaaaagtttttcatgaaaacatgagatttcttaagattgtttttttcttttaagattttacta 47780935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 216 - 478
Target Start/End: Original strand, 6312505 - 6312767
Alignment:
Q  216 atgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnngttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatg 315  Q
    |||| ||||||||||||||||||||||||||| ||| ||||||       |||||||| |||||||| || | ||||||||||||       |||||  |    
T  6312505 atgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaagttttgtggtattcaattaagactctttgtcattttaaaaaagtcttgag 6312604  T
Q  316 gtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggatt 415  Q
    |||||||||||||| | || |||| ||       |||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  6312605 gtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggatt 6312704  T
Q  416 ttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 478  Q
    |||||||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||    
T  6312705 ttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 6312767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 221 - 485
Target Start/End: Original strand, 29556040 - 29556305
Alignment:
Q  221 aaagtcttgtggtattcaatcaagactctttccaatttnnnnnnngttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtatt 320  Q
    ||||| ||||||||||||||||||||||||| ||||||       || |||||||||||||| || |||| |||| ||||       ||||| || ||||    
T  29556040 aaagttttgtggtattcaatcaagactcttttcaatttaaaaaaagtcttgtgttattcaattaagattcattgttatttaaaaaaagtcttgtgttatt 29556139  T
Q  321 caatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtg 420  Q
    ||||||||| | ||||||||||        ||||||| ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||| ||    
T  29556140 caatcaagactcttaatcacttaaaaaaaatctagtgttattcaaaatcattcaaatttcgaaagattgtttaataaattagattttgatggattttatg 29556239  T
Q  421 ggattttctagtgaaattttagcatgaaaaagtctttcatgaaa-acatgagatttcttatgattg 485  Q
    |||||||||| |||||||||||| ||||||||||||| |||||| ||||||||||||||| |||||    
T  29556240 ggattttctaatgaaattttagcttgaaaaagtcttttatgaaacacatgagatttcttaggattg 29556305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 355 - 479
Target Start/End: Complemental strand, 31572327 - 31572203
Alignment:
Q  355 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 454  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||    
T  31572327 gtggtattcaaaatcatttaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttatagtgaaattttaggatgaaaaagtc 31572228  T
Q  455 tttcatgaaaacatgagatttctta 479  Q
    |||||||||| ||||||||||||||    
T  31572227 tttcatgaaatcatgagatttctta 31572203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 216 - 478
Target Start/End: Original strand, 25612088 - 25612350
Alignment:
Q  216 atgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnngttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatg 315  Q
    |||| ||| ||||||||||||||||||||||| ||| ||||||       || ||||| ||||||||||| | ||||||||||||       |||||  |    
T  25612088 atgaaaaaatcttgtggtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgag 25612187  T
Q  316 gtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggatt 415  Q
    |||||||||||||||| || |||| ||       |||| |||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||||    
T  25612188 gtattcaatcaagatttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcaaaggattgtttaataaattggattttgatggatt 25612287  T
Q  416 ttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 478  Q
    |||||||||||| ||||  ||||||| || |||||||||||||||||||| ||||||||||||    
T  25612288 ttgtgggattttgtagtataattttaacaagaaaaagtctttcatgaaaagatgagatttctt 25612350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 216 - 478
Target Start/End: Complemental strand, 29396657 - 29396395
Alignment:
Q  216 atgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnngttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatg 315  Q
    |||| ||||||||||||||||||||||||||| ||| ||||||        | || || ||||||||||| | ||||||||||||       |||||  |    
T  29396657 atgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaaatcttttggtattcaatcaagactctttgtcattttaaaaaagtcttgag 29396558  T
Q  316 gtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggatt 415  Q
    |||||||||||||| | || |||| ||       |||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  29396557 gtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggatt 29396458  T
Q  416 ttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 478  Q
    |||||||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||    
T  29396457 ttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 29396395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 216 - 478
Target Start/End: Complemental strand, 48177731 - 48177469
Alignment:
Q  216 atgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnngttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatg 315  Q
    |||| ||||||||||||||||||||||||||| ||| ||| ||        | ||||| ||||||||||| | ||||||||||||       |||||  |    
T  48177731 atgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaaaatcttgtggtattcaatcaatactctttgtcattttaaaaaagtcttgag 48177632  T
Q  316 gtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggatt 415  Q
    |||||||||||| ||| || |||||||       |||| ||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||    
T  48177631 gtattcaatcaaaatttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggatt 48177532  T
Q  416 ttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 478  Q
    |||||||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||    
T  48177531 ttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 48177469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 221 - 475
Target Start/End: Original strand, 51701516 - 51701770
Alignment:
Q  221 aaagtcttgtggtattcaatcaagactctttccaatttnnnnnnngttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtatt 320  Q
    ||||| ||||||||||||||||||||| ||| ||||||       || ||||| ||||||||||| | ||||||||||||       |||||  ||||||    
T  51701516 aaagttttgtggtattcaatcaagactttttgcaatttaaaaatagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtatt 51701615  T
Q  321 caatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtg 420  Q
    ||||||||| | || |||| ||       |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  51701616 caatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtg 51701715  T
Q  421 ggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagattt 475  Q
    ||||||| ||||| ||||||| || |||||||||||||||||||| |||||||||    
T  51701716 ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagattt 51701770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 350 - 475
Target Start/End: Complemental strand, 32589088 - 32588963
Alignment:
Q  350 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 449  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| |||    
T  32589088 gtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaatcggattttgatggattttgtgagattttctagtgaaattttagcataaaa 32588989  T
Q  450 aagtctttcatgaaaacatgagattt 475  Q
    ||||||||||||||||||||||||||    
T  32588988 aagtctttcatgaaaacatgagattt 32588963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 172 - 456
Target Start/End: Original strand, 48524208 - 48524490
Alignment:
Q  172 tatttgatcatgattctaagggattttaaaagannnnnnnnatcatgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnngttttg 271  Q
    |||| |||||||||||||||| |||||||||||        ||||| | ||||| |||  |||||||||||||||||||||||||||       || |||    
T  48524208 tattggatcatgattctaaggaattttaaaagacttttt--atcataaaaaagttttgcagtattcaatcaagactctttccaatttaaaaaaagtcttg 48524305  T
Q  272 tgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcat 371  Q
    |||||||||||||| ||| ||||||||||        || | ||||||| |||||| | | ||||||||||       |||| ||| |||||||||||||    
T  48524306 tgttattcaatcaagattttttgtcatttaaaaaaattcatgtggtatttaatcaaaactcttaatcacttaaaaaaagtcttgtgatattcaaaatcat 48524405  T
Q  372 tcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctt 456  Q
    |||||||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  48524406 tcaaattttgaaagattgtttaataaatcagtttttgatggattttgtgggattttctagtgaaattttaacatgaaaaagtctt 48524490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 166 - 485
Target Start/End: Original strand, 33025394 - 33025703
Alignment:
Q  166 ggggtgtatttgatcatgattctaagggattttaaaagannnnnnnnatcatgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnn 265  Q
    |||||||||| ||||||||||||||| || |||||||||        ||||||| ||| ||||||||||||||||||| |   ||||||||||           
T  33025394 ggggtgtattggatcatgattctaagagaatttaaaagactttttt-atcatgaaaaaatcttgtggtattcaatcaaaaaattttccaatttaaaaaaa 33025492  T
Q  266 gttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagat-tattaatcacttnnnnnnngtctagtggtattca 364  Q
    ||||||| |||||||||||| |||||||| |||||        |||| |||||||||||||| |  | ||||||||||       |||| ||||||||||    
T  33025493 gttttgtcttattcaatcaagattctttgacatttttaaaaattcttgtggtattcaatcaaaaactcttaatcacttaaaaaaagtcttgtggtattca 33025592  T
Q  365 aaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaa 464  Q
    ||||||||||||||| |||||||||||||||| ||||||||          ||||||||||||||| | |||||||||||||||||||||||||||||||    
T  33025593 aaatcattcaaattttgaaggattgtttaatacatcagatt----------ttgtgggattttctaataaaattttagcatgaaaaagtctttcatgaaa 33025682  T
Q  465 acatgagatttcttatgattg 485  Q
    |||||||||||||||||||||    
T  33025683 acatgagatttcttatgattg 33025703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 350 - 478
Target Start/End: Complemental strand, 9577567 - 9577439
Alignment:
Q  350 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 449  Q
    |||| ||| ||||||||||||||||||||| |||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  9577567 gtcttgtgatattcaaaatcattcaaatttagaaggattgtttaataaattggattttgatggattttgtgagattttctagtgaaattttagaatgaaa 9577468  T
Q  450 aagtctttcatgaaaacatgagatttctt 478  Q
    || ||||||||||||||||||||||||||    
T  9577467 aaatctttcatgaaaacatgagatttctt 9577439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 216 - 478
Target Start/End: Complemental strand, 15835322 - 15835060
Alignment:
Q  216 atgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnngttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatg 315  Q
    |||| ||||||||||||||||||||||||||| ||| ||||||       || ||||| ||||||||||| | ||||||||||||       |||||  |    
T  15835322 atgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgag 15835223  T
Q  316 gtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggatt 415  Q
    |||||||||||||| |  | |||| ||        ||| |||||||||||||||||||||||| | ||||||||||||||||||  ||||||||||||||    
T  15835222 gtattcaatcaagacttctcatcatttaaaaaaaatcttgtggtattcaaaatcattcaaattgcaaaggattgtttaataaattggattttgatggatt 15835123  T
Q  416 ttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 478  Q
    || ||||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||    
T  15835122 ttatgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 15835060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 269 - 485
Target Start/End: Complemental strand, 37014856 - 37014640
Alignment:
Q  269 ttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaat 368  Q
    ||||| |||||||| || | ||||||||||||       ||||| |||||||||||||| ||| || |||||||       |||| ||| ||||||||||    
T  37014856 ttgtggtattcaattaagactctttgtcatttagaagaagtcttgtggtattcaatcaatattcttcatcacttaaaaaaagtcttgtgatattcaaaat 37014757  T
Q  369 cattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 468  Q
    |||||||||||| || |||||||| ||||||   ||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| |||||||    
T  37014756 cattcaaatttctaaagattgttttataaattgaattttgatggattttgtcggattttctagtgaaattttagcatgaaaaagtctctcataaaaacat 37014657  T
Q  469 gagatttcttatgattg 485  Q
    ||||||||||| |||||    
T  37014656 gagatttcttaagattg 37014640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 216 - 477
Target Start/End: Original strand, 46327973 - 46328234
Alignment:
Q  216 atgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnngttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatg 315  Q
    |||| ||||||||||| ||||||||||| ||| ||| ||| ||       || ||||| ||||||||||| | ||||||||||||       |||||  |    
T  46327973 atgaaaaagtcttgtgttattcaatcaaaactttttgcaacttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgag 46328072  T
Q  316 gtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggatt 415  Q
    |||||||||||||| | || |||||||       |||| ||||||||||||||||||||||||||||||||||||||||| |||  ||||||||||||||    
T  46328073 gtattcaatcaagacttttcatcacttacaaaaagtctcgtggtattcaaaatcattcaaatttcgaaggattgtttaattaattggattttgatggatt 46328172  T
Q  416 ttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttct 477  Q
    |||||||||||| ||||| ||||||| || ||||||||||||||| |||| || ||||||||    
T  46328173 ttgtgggattttgtagtgtaattttaacaagaaaaagtctttcataaaaagataagatttct 46328234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 216 - 478
Target Start/End: Complemental strand, 9322769 - 9322507
Alignment:
Q  216 atgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnngttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatg 315  Q
    |||| ||||||||||||||||||||||||||| ||| ||||||         |||||| ||||||||||| | ||||||||||||       |||||  |    
T  9322769 atgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaaaatttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgag 9322670  T
Q  316 gtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggatt 415  Q
    |||||| ||||||| | || |||| ||       |||  ||||||||||||||||||||||||| |||||||||||||||||||   |||||||||||||    
T  9322669 gtattcgatcaagacttttcatcatttaaaaaaagtcctgtggtattcaaaatcattcaaatttagaaggattgtttaataaattgaattttgatggatt 9322570  T
Q  416 ttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 478  Q
    || ||||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||    
T  9322569 ttatgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 9322507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 216 - 478
Target Start/End: Complemental strand, 28387662 - 28387400
Alignment:
Q  216 atgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnngttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatg 315  Q
    |||| |||||||| |||||||||||||||||| ||| ||||||       || || || ||||||||||| ||||||||||||||       |||||  |    
T  28387662 atgaaaaagtcttatggtattcaatcaagactttttgcaatttaaaaaaagtcttttggtattcaatcaagattctttgtcattttaaaaaagtcttgag 28387563  T
Q  316 gtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggatt 415  Q
    |||||||||||||| | || |||| ||        ||| |||||||||||| ||||||||||||||||||||||||||||||||  ||||||||||||||    
T  28387562 gtattcaatcaagacttttcatcatttaaaaaaaatcttgtggtattcaaattcattcaaatttcgaaggattgtttaataaattggattttgatggatt 28387463  T
Q  416 ttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 478  Q
    |||||||||||| ||||  ||||||| ||  |||||||||||||| |||| ||||||||||||    
T  28387462 ttgtgggattttgtagtttaattttaacaaaaaaaagtctttcataaaaagatgagatttctt 28387400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 166 - 372
Target Start/End: Original strand, 22183252 - 22183457
Alignment:
Q  166 ggggtgtatttgatcatgattctaagggattttaaaagannnnnnnnatcatgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnn 265  Q
    |||||||||| |||||||||||||| |||||||||||||        ||||||| ||||||||||||||||||||||||||||||||||||||           
T  22183252 ggggtgtattggatcatgattctaaaggattttaaaagactttttt-atcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaa 22183350  T
Q  266 gttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaa 365  Q
    |||||||||||||||||||| ||||||||||||||       ||||| |||||||||||||||||| ||||||||||       ||||||||||||||||    
T  22183351 gttttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagattcttaatcacttaaaaaaagtctagtggtattcaa 22183450  T
Q  366 aatcatt 372  Q
    |||||||    
T  22183451 aatcatt 22183457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 166 - 342
Target Start/End: Original strand, 953701 - 953876
Alignment:
Q  166 ggggtgtatttgatcatgattctaagggattttaaaagannnnnnnnatcatgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnn 265  Q
    |||||||||| ||||||||||||||||||||||||||||        ||||||| ||||||||||||||||||||||||||||||||||||||           
T  953701 ggggtgtattggatcatgattctaagggattttaaaagactttttt-atcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaa 953799  T
Q  266 gttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcactt 342  Q
    || ||||||||||||||||| ||||||||||||||       ||||| |||||||| ||||||| | ||||||||||    
T  953800 gtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcgatcaagactcttaatcactt 953876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 224 - 408
Target Start/End: Original strand, 18798430 - 18798614
Alignment:
Q  224 gtcttgtggtattcaatcaagactctttccaatttnnnnnnngttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaa 323  Q
    |||||||||||||||||||||||| ||| ||| ||       || ||||| ||||||||||| | ||||||||||||       |||||  |||||||||    
T  18798430 gtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 18798529  T
Q  324 tcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg 408  Q
    |||||| | || |||| ||       |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  18798530 tcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 18798614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 216 - 478
Target Start/End: Original strand, 29219219 - 29219469
Alignment:
Q  216 atgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnngttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatg 315  Q
    |||| ||||||||||||||||||||||||||| ||| ||| ||       || ||||| ||||||||||| | |||  |||||||       |||||  |    
T  29219219 atgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagactct--gtcattttaaaaaagtcttgag 29219316  T
Q  316 gtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggatt 415  Q
     ||||||||||||| | || |||||||       |||| ||||||||||||||||||||||||  |||||||||||||||||||  ||||||||||||||    
T  29219317 atattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaattaagaaggattgtttaataaattggattttgatggatt 29219416  T
Q  416 ttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 478  Q
    |||          ||||| ||||||| || |||||||| ||||||||||| ||||||||||||    
T  29219417 ttg----------tagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttctt 29219469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 350 - 478
Target Start/End: Complemental strand, 38536224 - 38536106
Alignment:
Q  350 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 449  Q
    |||| |||||||||||||| ||||||||||| ||||||||||||||||||  |||||||||||||||||          ||||| ||||||| || ||||    
T  38536224 gtcttgtggtattcaaaattattcaaatttcaaaggattgtttaataaattggattttgatggattttg----------tagtgtaattttaacaagaaa 38536135  T
Q  450 aagtctttcatgaaaacatgagatttctt 478  Q
    |||||||||||||||| ||||||||||||    
T  38536134 aagtctttcatgaaaagatgagatttctt 38536106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 350 - 478
Target Start/End: Complemental strand, 38558442 - 38558324
Alignment:
Q  350 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 449  Q
    |||| |||||||||||||| ||||||||||| ||||||||||||||||||  |||||||||||||||||          ||||| ||||||| || ||||    
T  38558442 gtcttgtggtattcaaaattattcaaatttcaaaggattgtttaataaattggattttgatggattttg----------tagtgtaattttaacaagaaa 38558353  T
Q  450 aagtctttcatgaaaacatgagatttctt 478  Q
    |||||||||||||||| ||||||||||||    
T  38558352 aagtctttcatgaaaagatgagatttctt 38558324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 216 - 474
Target Start/End: Complemental strand, 5495365 - 5495117
Alignment:
Q  216 atgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnngttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatg 315  Q
    |||| |||||| |||||||||||||||||||| ||| ||| ||       || ||||| |||||||| || | ||||||||||||       |||||  |    
T  5495365 atgaaaaagtcatgtggtattcaatcaagactttttgcaacttaaaggaagtcttgtggtattcaattaagactctttgtcattttaaaaaagtcttgag 5495266  T
Q  316 gtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggatt 415  Q
    |||||||||||||| | || |||||||       |||| |||||||||||||||||| ||||||| ||||||| ||||||||||          ||||||    
T  5495265 gtattcaatcaagacttttcatcacttaaaaaaagtctcgtggtattcaaaatcatttaaatttcaaaggattatttaataaat----------tggatt 5495176  T
Q  416 ttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatt 474  Q
    |||||||||||| ||||| ||||||| || ||||||||| || ||||||| ||||||||    
T  5495175 ttgtgggattttgtagtgtaattttaacaagaaaaagtcctttatgaaaagatgagatt 5495117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 216 - 399
Target Start/End: Original strand, 49230817 - 49231000
Alignment:
Q  216 atgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnngttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatg 315  Q
    |||| |||||| |||||||||||||||||||| ||| ||| ||       || ||||| ||||||||||| | ||||||||||||       |||||  |    
T  49230817 atgaaaaagtcatgtggtattcaatcaagactttttgcaaattaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgag 49230916  T
Q  316 gtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaat 399  Q
    |||||||||||||| | || |||||||       |||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  49230917 gtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattatttaataaat 49231000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 358 - 417
Target Start/End: Original strand, 955823 - 955882
Alignment:
Q  358 gtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggatttt 417  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  955823 gtattcaaaatcattcaaatttcgaagggttgtttaataaatcagattttgatggatttt 955882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 355 - 475
Target Start/End: Complemental strand, 48668905 - 48668795
Alignment:
Q  355 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 454  Q
    |||||||||||||| |||||||||||||| |||||||||||||||          |||||||||||||||| | ||||| ||||||| || |||||||||    
T  48668905 gtggtattcaaaattattcaaatttcgaaagattgtttaataaat----------tggattttgtgggattctgtagtgtaattttaacaagaaaaagtc 48668816  T
Q  455 tttcatgaaaacatgagattt 475  Q
    ||||||||||| |||||||||    
T  48668815 tttcatgaaaagatgagattt 48668795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 166 - 258
Target Start/End: Complemental strand, 19452168 - 19452077
Alignment:
Q  166 ggggtgtatttgatcatgattctaagggattttaaaagannnnnnnnatcatgataaagtcttgtggtattcaatcaagactctttccaattt 258  Q
    |||||||||| ||||||||||||||||||||||||||||        ||| ||| ||||||||||||||||||||||||||||||||||||||    
T  19452168 ggggtgtattggatcatgattctaagggattttaaaagactttttt-atcttgaaaaagtcttgtggtattcaatcaagactctttccaattt 19452077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 350 - 441
Target Start/End: Original strand, 51085860 - 51085951
Alignment:
Q  350 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttta 441  Q
    |||| |||||||||||||| |||||||||| |||||||| || |||||||  |||||||||| ||||||||| ||||||| |||||||||||    
T  51085860 gtctcgtggtattcaaaataattcaaattttgaaggattattaaataaattggattttgatgaattttgtggaattttcttgtgaaatttta 51085951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 213 - 300
Target Start/End: Original strand, 14494137 - 14494224
Alignment:
Q  213 atcatgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnngttttgtgttattcaatcaaaattctttgtcattt 300  Q
    ||||||| ||| ||||||||||||||||||||||||||||||||||       || ||||||||||||||||| ||||||||||||||    
T  14494137 atcatgaaaaaatcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcattt 14494224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 167 - 258
Target Start/End: Original strand, 47780502 - 47780592
Alignment:
Q  167 gggtgtatttgatcatgattctaagggattttaaaagannnnnnnnatcatgataaagtcttgtggtattcaatcaagactctttccaattt 258  Q
    ||||||||| |||||||||||||||  |||||||||||        ||||||| ||||||||||||||||||||||||||||||| ||||||    
T  47780502 gggtgtattggatcatgattctaagaaattttaaaagattttttt-atcatgaaaaagtcttgtggtattcaatcaagactcttttcaattt 47780592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 216 - 342
Target Start/End: Complemental strand, 8141397 - 8141271
Alignment:
Q  216 atgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnngttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatg 315  Q
    |||| ||||||||||||||||||||||||||| ||| ||| ||       |||||||| ||||||||||| | ||||||||||||       |||||  |    
T  8141397 atgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaaagttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgag 8141298  T
Q  316 gtattcaatcaagattattaatcactt 342  Q
    |||||||||||||| |||| |||||||    
T  8141297 gtattcaatcaagactattcatcactt 8141271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 375 - 477
Target Start/End: Original strand, 38319996 - 38320098
Alignment:
Q  375 aatttcgaaggattgtttaataaatcagattttgatggattttgt-gggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagat 473  Q
    ||||| ||| ||||||||| |||||  ||||||||| |||||||| ||| |||| ||||||| ||||||||  ||||||||||||||||||| |||| ||    
T  38319996 aattttgaatgattgtttactaaataggattttgatagattttgttgggtttttttagtgaa-ttttagcacaaaaaagtctttcatgaaaatatgatat 38320094  T
Q  474 ttct 477  Q
    ||||    
T  38320095 ttct 38320098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 358 - 408
Target Start/End: Complemental strand, 31622586 - 31622536
Alignment:
Q  358 gtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg 408  Q
    ||||||||||||||||||||||| || |||||||||||||||| |||||||    
T  31622586 gtattcaaaatcattcaaatttcaaaagattgtttaataaatcggattttg 31622536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 350 - 451
Target Start/End: Original strand, 47784451 - 47784542
Alignment:
Q  350 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 449  Q
    |||| |||||||||||||| ||||||| ||| || |||||||||||||||          ||||||||||| ||||||||||| ||||||||||||||||    
T  47784451 gtcttgtggtattcaaaattattcaaacttctaaagattgtttaataaat----------tggattttgtgagattttctagttaaattttagcatgaaa 47784540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 275 - 475
Target Start/End: Original strand, 45272577 - 45272765
Alignment:
Q  275 tattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattca 374  Q
    ||||||||||||| ||||||||||||       |||||  ||||||||||||||| | || |||||||        ||| |||||||||||||| ||| |    
T  45272577 tattcaatcaaaactctttgtcattttaaaaa-gtcttgaggtattcaatcaagacttttcatcacttaaaaaaaatctcgtggtattcaaaattattta 45272675  T
Q  375 aatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatt 474  Q
    |||||||||||| ||||||||||||          ||||||||||| |||||| ||||| ||||||| || |||||| ||||| || |||| ||||||||    
T  45272676 aatttcgaagga-tgtttaataaat----------tggattttgtgagattttgtagtgtaattttaacaagaaaaaatcttttataaaaagatgagatt 45272764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 429 - 477
Target Start/End: Original strand, 18798615 - 18798663
Alignment:
Q  429 tagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttct 477  Q
    ||||| ||||||| || |||||||||||||||||||| |||||||||||    
T  18798615 tagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 18798663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 448 - 508
Target Start/End: Original strand, 48524805 - 48524865
Alignment:
Q  448 aaaagtctttcatgaaaacatgagatttcttatgattgnnnnnnncttttaagattttact 508  Q
    |||||||||||||||||||||||||||| ||| |||||       ||||||||||||||||    
T  48524805 aaaagtctttcatgaaaacatgagatttgttaggattggttttttcttttaagattttact 48524865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 221 - 251
Target Start/End: Original strand, 18798469 - 18798499
Alignment:
Q  221 aaagtcttgtggtattcaatcaagactcttt 251  Q
    |||||||||||||||||||||||||||||||    
T  18798469 aaagtcttgtggtattcaatcaagactcttt 18798499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 166 - 204
Target Start/End: Original strand, 28541386 - 28541424
Alignment:
Q  166 ggggtgtatttgatcatgattctaagggattttaaaaga 204  Q
    |||||||||| ||||||||||||||| ||||||||||||    
T  28541386 ggggtgtattggatcatgattctaagcgattttaaaaga 28541424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 221 - 251
Target Start/End: Complemental strand, 38536311 - 38536281
Alignment:
Q  221 aaagtcttgtggtattcaatcaagactcttt 251  Q
    |||||||||||||||||||||||||||||||    
T  38536311 aaagtcttgtggtattcaatcaagactcttt 38536281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 221 - 251
Target Start/End: Complemental strand, 38558529 - 38558499
Alignment:
Q  221 aaagtcttgtggtattcaatcaagactcttt 251  Q
    |||||||||||||||||||||||||||||||    
T  38558529 aaagtcttgtggtattcaatcaagactcttt 38558499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 221 - 251
Target Start/End: Original strand, 47784407 - 47784437
Alignment:
Q  221 aaagtcttgtggtattcaatcaagactcttt 251  Q
    |||||||||||||||||||||||||||||||    
T  47784407 aaagtcttgtggtattcaatcaagactcttt 47784437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 421 - 449
Target Start/End: Original strand, 955876 - 955904
Alignment:
Q  421 ggattttctagtgaaattttagcatgaaa 449  Q
    |||||||||||||||||||||||||||||    
T  955876 ggattttctagtgaaattttagcatgaaa 955904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 177; Significance: 4e-95; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 177; E-Value: 4e-95
Query Start/End: Original strand, 170 - 485
Target Start/End: Complemental strand, 26374741 - 26374429
Alignment:
Q  170 tgtatttgatcatgattctaagggattttaaaagannnnnnnnatcatgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnngttt 269  Q
    |||||| ||||||||||||||||||||||||||||        ||||||| ||||||||||| ||||||||||||||||||||||||||       |||     
T  26374741 tgtattggatcatgattctaagggattttaaaagactttttt-atcatgaaaaagtcttgtgatattcaatcaagactctttccaatttaaaaaaagtt- 26374644  T
Q  270 tgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatc 369  Q
     ||||||||||||||| ||||||||||||||       ||||| |||||||||||||||| | ||||||||||       ||||||||||||||||||||    
T  26374643 -gtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatc 26374545  T
Q  370 attcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatg 469  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26374544 attcaaatttcgaaggattgtttaataaataagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatg 26374445  T
Q  470 agatttcttatgattg 485  Q
    |||||||||| |||||    
T  26374444 agatttcttaggattg 26374429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 175; E-Value: 7e-94
Query Start/End: Original strand, 166 - 509
Target Start/End: Complemental strand, 2705136 - 2704794
Alignment:
Q  166 ggggtgtatttgatcatgattctaagggattttaaaagannnnnnnnatcatgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnn 265  Q
    |||||||||| |||||||||| ||| |||||||||||||        ||||||| ||||||||||||||||||||||||||||||||||| ||           
T  2705136 ggggtgtattggatcatgattgtaaaggattttaaaagattttttt-atcatgaaaaagtcttgtggtattcaatcaagactctttccaaattaaaaaaa 2705038  T
Q  266 gttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaa 365  Q
    || ||||||||||||||||| ||||||||||||||       ||||| |||||||||||||||| | ||||||||||       ||||||||||||||||    
T  2705037 gtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaa 2704938  T
Q  366 aatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 465  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  2704937 aatcattcaaatttcgaatgattgtttaataaatcaaattttgatggattttgtgggattttctagtgatattttagcatgaaaaagtctttcatgaaaa 2704838  T
Q  466 catgagatttcttatgattgnnnnnnncttttaagattttacta 509  Q
    |||||||||||||| |||||       |||||||||||||||||    
T  2704837 catgagatttcttaggattgtttttttcttttaagattttacta 2704794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 175; E-Value: 7e-94
Query Start/End: Original strand, 166 - 509
Target Start/End: Complemental strand, 42735594 - 42735252
Alignment:
Q  166 ggggtgtatttgatcatgattctaagggattttaaaagannnnnnnnatcatgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnn 265  Q
    |||||||||| ||||||||||||||||||||||||||||        ||||||| ||||||||||||||||||||||||||||||||||||||           
T  42735594 ggggtgtattggatcatgattctaagggattttaaaagactttttt-atcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaa 42735496  T
Q  266 gttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaa 365  Q
    || ||||||||||||||||| ||||||| ||||||       | ||| ||||||||||| |||| | ||||||||||       ||||||||||||||||    
T  42735495 gtcttgtgttattcaatcaagattctttatcatttaaaaaaagacttgtggtattcaattaagactcttaatcacttaaaaaaagtctagtggtattcaa 42735396  T
Q  366 aatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 465  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||    
T  42735395 aatcattcaaatttcgaagtattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcttgaaaaagtctttcataaaaa 42735296  T
Q  466 catgagatttcttatgattgnnnnnnncttttaagattttacta 509  Q
    |||||||||||||| |||||       |||||||||||||||||    
T  42735295 catgagatttcttaggattgtttttttcttttaagattttacta 42735252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 174; E-Value: 3e-93
Query Start/End: Original strand, 167 - 509
Target Start/End: Complemental strand, 7507215 - 7506874
Alignment:
Q  167 gggtgtatttgatcatgattctaagggattttaaaagannnnnnnnatcatgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnng 266  Q
    ||||||||| ||||||||||||||||||||||||||||        ||||||| ||||||||||||||||||||||||||||||||||||||            
T  7507215 gggtgtattggatcatgattctaagggattttaaaagactttttt-atcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaaa 7507117  T
Q  267 ttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaa 366  Q
     |||||||||||||||| | |||| |||||||||       ||||| |||||||||||||||| | ||||||||||       |||||||||||||||||    
T  7507116 gtttgtgttattcaatcgagattccttgtcatttaagaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaa 7507017  T
Q  367 atcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaac 466  Q
    | ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  7507016 accattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgtaaac 7506917  T
Q  467 atgagatttcttatgattgnnnnnnncttttaagattttacta 509  Q
    ||||||||||||| |||||       |||||||||||||||||    
T  7506916 atgagatttcttaggattgtttttttcttttaagattttacta 7506874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 172; E-Value: 4e-92
Query Start/End: Original strand, 166 - 485
Target Start/End: Complemental strand, 23115485 - 23115168
Alignment:
Q  166 ggggtgtatttgatcatgattctaagggattttaaaagannnnnnnnatcatgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnn 265  Q
    |||||||||| ||||||||||||||||||||||||||||        ||||||| ||||||||||||||||||||||||||||||||||||||           
T  23115485 ggggtgtattggatcatgattctaagggattttaaaagactttttt-atcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaa 23115387  T
Q  266 gttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaa 365  Q
    || ||||||||||||||||| ||||||||||||||       ||||| |||||||||||||||| | ||||||||||       ||||||||||||||||    
T  23115386 gtcttgtgttattcaatcaagattctttgtcatttaaaaaatgtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaa 23115287  T
Q  366 aatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 465  Q
    | |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  23115286 a-tcattcaaatttggaaggattgtttaataaatcagattttgatggattttgtgggattttctaatgaaattttggcatgaaaaagtctttcatgaaaa 23115188  T
Q  466 catgagatttcttatgattg 485  Q
    ||||||||| |||| |||||    
T  23115187 catgagattccttaggattg 23115168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 168; E-Value: 1e-89
Query Start/End: Original strand, 215 - 485
Target Start/End: Complemental strand, 42938386 - 42938116
Alignment:
Q  215 catgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnngttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttat 314  Q
    ||||| ||||||||||||||||||||||||||||||| ||||||       || ||||||||||||||||| ||| ||||||||||       ||||| |    
T  42938386 catgaaaaagtcttgtggtattcaatcaagactcttttcaatttaaaaaaagtcttgtgttattcaatcaagattatttgtcatttaaaaaaagtcttgt 42938287  T
Q  315 ggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggat 414  Q
    ||||||||||||||| | ||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42938286 ggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggat 42938187  T
Q  415 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttatgattg 485  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||    
T  42938186 tttgtgggattttctagtgaaattttagcctgaaaaagtctttcatgaaaacatgagatttcttaggattg 42938116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 165; E-Value: 6e-88
Query Start/End: Original strand, 166 - 509
Target Start/End: Complemental strand, 5576938 - 5576595
Alignment:
Q  166 ggggtgtatttgatcatgattctaagggattttaaaagannnnnnnnatcatgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnn 265  Q
    |||||||||| ||| ||||||||||||||||||||||||         |||||| | ||||||||||||||||||||||||||||||||||||           
T  5576938 ggggtgtattggattatgattctaagggattttaaaagatttttttg-tcatgaaatagtcttgtggtattcaatcaagactctttccaatttaaaaaaa 5576840  T
Q  266 gttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnn-gtctagtggtattca 364  Q
    || ||||||||||||||||| ||||||||||||||       ||||| |||||||||||||||| | ||||||||||        ||| |||||||||||    
T  5576839 gtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaagtcaagtggtattca 5576740  T
Q  365 aaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaa 464  Q
    |||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  5576739 aaatcattcaaatttcgaagaattgtttaataaaccagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtcttttatgaaa 5576640  T
Q  465 acatgagatttcttatgattgnnnnnnncttttaagattttacta 509  Q
    ||||||||||||||| |||||       |||||||||||||||||    
T  5576639 acatgagatttcttaggattgttttttccttttaagattttacta 5576595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 6 - 165
Target Start/End: Original strand, 43399869 - 43400028
Alignment:
Q  6 caagtgcaaccagcacggtattagatgtgcttaatttcatgcatgttattgtgatctattctatttatctatgaatttcatgcatatatactctatttaa 105  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  43399869 caagtgcaaccagcacggtattagatgtgcttaatttcatgcatgttattgtcatctattctatttatctatgaatttcatgcatatatactctatttaa 43399968  T
Q  106 ttcatgcattttaattctttaatatgctaagactcttctttaatacttttctttgattta 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43399969 ttcatgcattttaattctttaatatgctaagactcttctttaatacttttctttgattta 43400028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 269 - 509
Target Start/End: Complemental strand, 24502028 - 24501788
Alignment:
Q  269 ttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaat 368  Q
    ||||||||||||||||| ||||||| ||||||       ||||| |||||||||||||||| | ||||||||||       |||||||||||||||||||    
T  24502028 ttgtgttattcaatcaagattctttatcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaat 24501929  T
Q  369 cattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 468  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24501928 cattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 24501829  T
Q  469 gagatttcttatgattgnnnnnnncttttaagattttacta 509  Q
    ||||||||||| |||||       |||||||||||||||||    
T  24501828 gagatttcttaggattgtttttttcttttaagattttacta 24501788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 169 - 509
Target Start/End: Original strand, 41478989 - 41479318
Alignment:
Q  169 gtgtatttgatcatgattctaagggattttaaaagannnnnnnnatcatgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnngtt 268  Q
    ||||||| ||||||||||||||||||||||||||||        ||||||| ||||||||||||||||||||||||||||||||||||||       |||    
T  41478989 gtgtattggatcatgattctaagggattttaaaagactttttt-atcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtt 41479087  T
Q  269 ttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaat 368  Q
    ||||||||||||||||| ||||||||||||||       ||||| |||||||||||||||| | ||||||||||       ||||| |||||||||||||    
T  41479088 ttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctaatggtattcaaaat 41479187  T
Q  369 cattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 468  Q
    ||||||||||||||| |||||||||||||||||          ||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  41479188 cattcaaatttcgaatgattgtttaataaatca----------gattttgtgggattttctagtaaaattttagcatgaaaaaatctttcatgaaaacat 41479277  T
Q  469 gagatttcttatgattgnnnnnnncttttaagattttacta 509  Q
    ||||||||||| |||||       |||||||||||||||||    
T  41479278 gagatttcttaggattgtttttttcttttaagattttacta 41479318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 169 - 509
Target Start/End: Original strand, 43959549 - 43959878
Alignment:
Q  169 gtgtatttgatcatgattctaagggattttaaaagannnnnnnnatcatgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnngtt 268  Q
    |||||||||||||||||| ||| |||||||||||||        ||||||| ||||||||||||||||||||||||||||||||||||||       ||     
T  43959549 gtgtatttgatcatgattttaaaggattttaaaagactttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtc 43959648  T
Q  269 ttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaat 368  Q
    ||||||||||||||||| ||||||||||||||       ||||| || ||||||||||||||| ||||||||||       | |||||||||||||||||    
T  43959649 ttgtgttattcaatcaagattctttgtcattttaaaaaagtcttgtg-tattcaatcaagattcttaatcacttcaaaaaagactagtggtattcaaaat 43959747  T
Q  369 cattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 468  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||| || |||||||    
T  43959748 cattcaaatttcgaatgattgtttaataaatcagattttgatggattttgtg----------gtgaaattttagcatgaaaaagtctttaattaaaacat 43959837  T
Q  469 gagatttcttatgattgnnnnnnncttttaagattttacta 509  Q
    |||||||||||||||||       |||||||||||||||||    
T  43959838 gagatttcttatgattgtttttttcttttaagattttacta 43959878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 145; E-Value: 5e-76
Query Start/End: Original strand, 167 - 509
Target Start/End: Original strand, 42937250 - 42937582
Alignment:
Q  167 gggtgtatttgatcatgattctaagggattttaaaagannnnnnnnatcatgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnng 266  Q
    ||||||||| |||||||||| |||||||||||||||||        ||||||| |||||||||||||||||||||||        | |||||       |    
T  42937250 gggtgtattggatcatgattttaagggattttaaaagactttttt-atcatgaaaaagtcttgtggtattcaatcaac-------caaatttaaaaaaag 42937341  T
Q  267 ttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaa 366  Q
    | ||||||||||||||||| ||| ||||||||||       ||||| ||||||||||||  || | ||||||||||       |||||||||||||||||    
T  42937342 tcttgtgttattcaatcaagattttttgtcatttaaaaaaagtcttgtggtattcaatc--gactcttaatcacttaaaaaaagtctagtggtattcaaa 42937439  T
Q  367 atcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaac 466  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  42937440 atcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcattaaaaagtctttcatgaaaac 42937539  T
Q  467 atgagatttcttatgattgnnnnnnncttttaagattttacta 509  Q
    |||||||||||||||||||       |||||||||||||||||    
T  42937540 atgagatttcttatgattgtttttttcttttaagattttacta 42937582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 272 - 484
Target Start/End: Complemental strand, 10392449 - 10392237
Alignment:
Q  272 tgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcat 371  Q
    |||||||||||||| ||||||||||||||        |||| || ||||||||||||| | ||||||||||       ||||||||||||||| ||||||    
T  10392449 tgttattcaatcaagattctttgtcattttaaaaaattcttgtgatattcaatcaagacttttaatcacttaagaaaagtctagtggtattcagaatcat 10392350  T
Q  372 tcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgag 471  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  10392349 tcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaaatctttcatgaaaacatgag 10392250  T
Q  472 atttcttatgatt 484  Q
    |||| ||| ||||    
T  10392249 atttattaggatt 10392237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 216 - 478
Target Start/End: Complemental strand, 14782403 - 14782141
Alignment:
Q  216 atgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnngttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatg 315  Q
    |||| ||||||||||||||||||||||||||| ||| ||||||       || ||||| ||||||||||| | ||||||||||||       |||||  |    
T  14782403 atgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgag 14782304  T
Q  316 gtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggatt 415  Q
    |||||||||||||| | || |||| ||       |||| ||||||||||||||||||||||||| |||||||||||||||||||  ||||||||||||||    
T  14782303 gtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggatt 14782204  T
Q  416 ttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 478  Q
    |||||||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||    
T  14782203 ttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 14782141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 216 - 478
Target Start/End: Complemental strand, 44726078 - 44725816
Alignment:
Q  216 atgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnngttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatg 315  Q
    |||| ||||||||||||||||||||||||||| ||| ||||||       || ||||| ||||||||||| | ||||||||||||       |||||  |    
T  44726078 atgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgag 44725979  T
Q  316 gtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggatt 415  Q
    |||||||||||||| | || |||| ||       |||| ||||||||||||||||||||||||| |||||||||||||||||||  ||||||||||||||    
T  44725978 gtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggatt 44725879  T
Q  416 ttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 478  Q
    |||||||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||    
T  44725878 ttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 44725816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 166 - 473
Target Start/End: Complemental strand, 32711599 - 32711305
Alignment:
Q  166 ggggtgtatttgatcatgattctaagggattttaaaagannnnnnnnatcatgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnn 265  Q
    |||||||||| ||||||||||||||| || |||||||||        ||||||| ||||| ||||||||||||||||||||||||| ||||||           
T  32711599 ggggtgtattggatcatgattctaagagactttaaaagactttttt-atcatgaaaaagttttgtggtattcaatcaagactcttttcaatttaaaaaaa 32711501  T
Q  266 gttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaa 365  Q
    || ||||||||||||||||| ||||||||||||||       ||||| |||||||||||||||| | ||||||||||       ||||||||||||||||    
T  32711500 gtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaa 32711401  T
Q  366 aatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 465  Q
    ||||||| ||||||||||||||||||||||||||||||||||| ||||             |||| ||||||||||||||||||||||||||||||||||    
T  32711400 aatcatttaaatttcgaaggattgtttaataaatcagattttg-tgga-----------aatctattgaaattttagcatgaaaaagtctttcatgaaaa 32711313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 216 - 475
Target Start/End: Complemental strand, 18958995 - 18958736
Alignment:
Q  216 atgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnngttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatg 315  Q
    |||| |||||||||| |||||||||||||||| ||| ||||||       || ||||| ||||||||||| | ||||| ||||||       |||||  |    
T  18958995 atgaaaaagtcttgtagtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagactctttatcattttaaaaaagtcttgag 18958896  T
Q  316 gtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggatt 415  Q
    |||||||||||||| | || |||| ||       |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||| |||||||    
T  18958895 gtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttaatggatt 18958796  T
Q  416 ttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagattt 475  Q
    |||||||||||| ||||| ||||||| || |||||||||||||||||||| || ||||||    
T  18958795 ttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagattagattt 18958736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 269 - 478
Target Start/End: Complemental strand, 9288672 - 9288463
Alignment:
Q  269 ttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaat 368  Q
    ||||| ||||||||||| | ||||||||||||       |||||  ||||||||||||| | | || |||||||       |||| ||||||||||||||    
T  9288672 ttgtgatattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaaaattttcatcacttaaaaaaagtcttgtggtattcaaaat 9288573  T
Q  369 cattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 468  Q
    |||||||||||||||||||||||||||||||  |||||||||| ||||||||||||||| ||||| ||||||| || |||||||||||||||||||| ||    
T  9288572 cattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 9288473  T
Q  469 gagatttctt 478  Q
    ||||||||||    
T  9288472 gagatttctt 9288463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 216 - 478
Target Start/End: Complemental strand, 19718149 - 19717887
Alignment:
Q  216 atgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnngttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatg 315  Q
    |||| |||||| || ||||||||||||||||| ||| ||||||       || ||||| ||||||||||| | ||||||||||||       |||||  |    
T  19718149 atgaaaaagtcctgcggtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgag 19718050  T
Q  316 gtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggatt 415  Q
    |||||||||||||| | || |||| ||       |||| |||||||||||||||||||||||||||||| ||||||||||||||  |||||| |||||||    
T  19718049 gtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaagaattgtttaataaattggattttaatggatt 19717950  T
Q  416 ttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 478  Q
    |||||||||||| ||||| ||||||| || |||||||||||| ||||||| ||||||||||||    
T  19717949 ttgtgggattttgtagtgtaattttaacaagaaaaagtcttttatgaaaagatgagatttctt 19717887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 216 - 478
Target Start/End: Complemental strand, 10295649 - 10295386
Alignment:
Q  216 atgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnngttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatg 315  Q
    |||| ||||||||||||||||||||||||||| ||| ||| ||       || || ||  |||||||||| | |||| |||| ||       |||||  |    
T  10295649 atgaaaaagtcttgtggtattcaatcaagactttttgcaacttaagaaaagtcttctggcattcaatcaagactcttcgtcacttaaaaaaagtcttgag 10295550  T
Q  316 gtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatgga-t 414  Q
    |||||||||||||| | || |||||||       |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||| |    
T  10295549 gtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggatt 10295450  T
Q  415 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 478  Q
    ||||||||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||    
T  10295449 tttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 10295386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 355 - 478
Target Start/End: Original strand, 4403184 - 4403307
Alignment:
Q  355 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 454  Q
    |||||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||||| ||||| ||||||| || |||||||||    
T  4403184 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgggttttgatggattttgtgggattttttagtgtaattttaacaagaaaaagtc 4403283  T
Q  455 tttcatgaaaacatgagatttctt 478  Q
    ||||||||||| ||||||||||||    
T  4403284 tttcatgaaaatatgagatttctt 4403307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 216 - 475
Target Start/End: Complemental strand, 39467735 - 39467477
Alignment:
Q  216 atgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnngttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatg 315  Q
    |||| ||||||||||||||||||||||||||| ||| ||| ||       || ||||| ||||||||||| | ||||||||||||       |||||  |    
T  39467735 atgaaaaagtcttgtggtattcaatcaagactttttacaacttaaaaaa-gtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgag 39467637  T
Q  316 gtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggatt 415  Q
    |||||||||||||| | || |||| ||       |||| |||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||    
T  39467636 gtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgaattttgatggatt 39467537  T
Q  416 ttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagattt 475  Q
    || ||||||||| ||||| ||||||| || |||||| ||||||||||||| |||||||||    
T  39467536 ttatgggattttgtagtgtaattttaacaagaaaaaatctttcatgaaaagatgagattt 39467477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 350 - 478
Target Start/End: Complemental strand, 43166824 - 43166696
Alignment:
Q  350 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 449  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| | ||| ||||||| || ||||    
T  43166824 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgttgtgtaattttaacaagaaa 43166725  T
Q  450 aagtctttcatgaaaacatgagatttctt 478  Q
    |||| ||||||||||| ||||||||||||    
T  43166724 aagtttttcatgaaaagatgagatttctt 43166696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 216 - 478
Target Start/End: Original strand, 26856004 - 26856267
Alignment:
Q  216 atgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnngttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttat- 314  Q
    |||| ||||| ||||||||||||||||||||| ||| ||| ||        | ||||| ||||||||||| | ||||||||||||       |||||       
T  26856004 atgaaaaagttttgtggtattcaatcaagactttttgcaacttaaaaaaaatattgtggtattcaatcaagactctttgtcattttaaaaaagtctttga 26856103  T
Q  315 ggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggat 414  Q
    ||||||||||||||| | || |||||||       |||| |||||||||||||||||||||||||||||| ||||||||||||||  |||||||||||||    
T  26856104 ggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaagtattgtttaataaattggattttgatggat 26856203  T
Q  415 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 478  Q
    ||||||||||||| ||||| ||||||| || ||||||||||||||  |||| || |||||||||    
T  26856204 tttgtgggattttgtagtgtaattttaacaagaaaaagtctttcagaaaaaaataagatttctt 26856267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 216 - 478
Target Start/End: Complemental strand, 18306229 - 18305977
Alignment:
Q  216 atgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnngttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatg 315  Q
    |||| ||||||||||||||||||||||||||| ||| ||| ||       || ||||| ||||||||||| | ||||||||||||       |||||  |    
T  18306229 atgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgag 18306130  T
Q  316 gtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggatt 415  Q
    |||||||||||||| | || |||| ||       |||| ||||||||||||||||||||||||||||| |||||||||||||||          ||||||    
T  18306129 gtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaagattgtttaataaat----------tggatt 18306040  T
Q  416 ttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 478  Q
    |||||||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||    
T  18306039 ttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 18305977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 357 - 479
Target Start/End: Complemental strand, 4950143 - 4950021
Alignment:
Q  357 ggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctt 456  Q
    ||||||||||||||||||| |||| || |||| |||||||||| ||||||||||||| ||||||| ||||||||||||||||||||||||||||| | ||    
T  4950143 ggtattcaaaatcattcaagtttcaaaagattatttaataaattagattttgatggaatttgtggaattttctagtgaaattttagcatgaaaaaatatt 4950044  T
Q  457 tcatgaaaacatgagatttctta 479  Q
    ||||| |||||| ||||||||||    
T  4950043 tcatgcaaacataagatttctta 4950021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 216 - 478
Target Start/End: Original strand, 7466273 - 7466525
Alignment:
Q  216 atgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnngttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatg 315  Q
    |||| ||||||||||||||||||||||||||| ||| ||| ||       || ||||| ||||||||||| | ||||||||||||       |||||  |    
T  7466273 atgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgag 7466372  T
Q  316 gtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggatt 415  Q
    |||||||||||||| | || ||| |||       |||| ||||||||||||||||||||||||| |||| ||||||||||||||          ||||||    
T  7466373 gtattcaatcaagacttttcatcgcttaaaaaaagtcttgtggtattcaaaatcattcaaattttgaagaattgtttaataaat----------tggatt 7466462  T
Q  416 ttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 478  Q
    |||||||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||    
T  7466463 ttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 7466525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 221 - 478
Target Start/End: Original strand, 32497468 - 32497715
Alignment:
Q  221 aaagtcttgtggtattcaatcaagactctttccaatttnnnnnnngttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtatt 320  Q
    ||||||||||||||||||||||||||| ||| ||| ||        | ||||| ||||||||||| | ||||||||||||       |||||  ||||||    
T  32497468 aaagtcttgtggtattcaatcaagactttttgcaacttaaaaaaaatcttgtggtattcaatcaatactctttgtcattttaaaaaagtcttgaggtatt 32497567  T
Q  321 caatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtg 420  Q
    ||||||||| | || |||||||       |||| ||||||||||||||||||||||||||||| |||||||||||||||          |||||||||||    
T  32497568 caatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaat----------tggattttgtg 32497657  T
Q  421 ggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 478  Q
    ||||||| ||||| ||||||| || || ||||||||||||||||| ||||||||||||    
T  32497658 ggattttgtagtgtaattttaacaagagaaagtctttcatgaaaagatgagatttctt 32497715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 358 - 478
Target Start/End: Complemental strand, 39189940 - 39189822
Alignment:
Q  358 gtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtcttt 457  Q
    |||||||| |||||||||||||||||||||||||||||||||  || ||||||||||||||  | |||||||||| |||||||| || |||||| |||||    
T  39189940 gtattcaacatcattcaaatttcgaaggattgtttaataaat-tgaatttgatggattttgatgaattttctagt-aaattttaacaagaaaaaatcttt 39189843  T
Q  458 catgaaaacatgagatttctt 478  Q
    |||||||||||||||||||||    
T  39189842 catgaaaacatgagatttctt 39189822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 358 - 465
Target Start/End: Complemental strand, 13478376 - 13478269
Alignment:
Q  358 gtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtcttt 457  Q
    |||||||||||| || |||||||||||||||||||||||||| |||||| | |||||||||| ||||||| |||  |||||||||||||| |||||||||    
T  13478376 gtattcaaaatcttttaaatttcgaaggattgtttaataaattagatttcgttggattttgtaggattttttagctaaattttagcatgataaagtcttt 13478277  T
Q  458 catgaaaa 465  Q
     |||||||    
T  13478276 tatgaaaa 13478269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 269 - 419
Target Start/End: Original strand, 16362187 - 16362337
Alignment:
Q  269 ttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaat 368  Q
    ||||| ||||||||||| | ||||||||||||       |||||  ||||||||||||||| | || || ||||       |||| ||||||||||||||    
T  16362187 ttgtgatattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcattacttaaaaaaagtctcgtggtattcaaaat 16362286  T
Q  369 cattcaaatttcgaaggattgtttaataaatcagattttgatggattttgt 419  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  16362287 cattcaaatttcgaaggattgtttaataaattggattttgatggattttgt 16362337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 356 - 464
Target Start/End: Complemental strand, 8410526 - 8410416
Alignment:
Q  356 tggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtggga--ttttctagtgaaattttagcatgaaaaagt 453  Q
    ||||||||||||||||| |||||| ||||||||||||| |||||  || |||||||||||||||||||  |||| |||||||||||||| |||| |||||    
T  8410526 tggtattcaaaatcattgaaatttggaaggattgtttactaaattggactttgatggattttgtgggattttttttagtgaaattttagtatgacaaagt 8410427  T
Q  454 ctttcatgaaa 464  Q
    |||||| ||||    
T  8410426 ctttcacgaaa 8410416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 216 - 408
Target Start/End: Complemental strand, 4031526 - 4031334
Alignment:
Q  216 atgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnngttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatg 315  Q
    |||| ||||||||||||||||| ||||||||| ||| ||||||       || ||||| ||||||||||| | ||||||||||||       |||||  |    
T  4031526 atgaaaaagtcttgtggtattcgatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagaatctttgtcattttaaaaaagtcttgag 4031427  T
Q  316 gtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg 408  Q
    |||||||||||||| | || || | ||       |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  4031426 gtattcaatcaagacttttcataaattaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 4031334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 216 - 478
Target Start/End: Complemental strand, 42306053 - 42305801
Alignment:
Q  216 atgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnngttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatg 315  Q
    |||| ||||||||||| ||||||||||||| | ||| ||||||       || ||||| ||||||||||| | ||||||||||||       |||||  |    
T  42306053 atgaaaaagtcttgtgatattcaatcaagaatttttgcaatttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgag 42305954  T
Q  316 gtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggatt 415  Q
    |||||||||||||| | || |||| ||        ||| |||||||||||||| |||||||||||||||||||||||||| |||  |||||| |||||||    
T  42305953 gtattcaatcaagacttttcatcatttaaaaaaaatcttgtggtattcaaaataattcaaatttcgaaggattgtttaatcaattggattttaatggatt 42305854  T
Q  416 ttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 478  Q
    |||          ||||| ||||||| || ||||||||| |||||||||| ||||||||||||    
T  42305853 ttg----------tagtgtaattttaacaagaaaaagtcattcatgaaaaaatgagatttctt 42305801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 275 - 408
Target Start/End: Original strand, 31623692 - 31623825
Alignment:
Q  275 tattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattca 374  Q
    ||||||||||| | ||||||||||||       |||||  ||||||||||||||| | || |||||||       |||| ||||||||||||||||||||    
T  31623692 tattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattca 31623791  T
Q  375 aatttcgaaggattgtttaataaatcagattttg 408  Q
    |||||||||||||||||||||||||  |||||||    
T  31623792 aatttcgaaggattgtttaataaattggattttg 31623825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 315 - 478
Target Start/End: Original strand, 37857156 - 37857309
Alignment:
Q  315 ggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggat 414  Q
    |||||||||| |||||| || |||||||       |||| |||||||||||| ||||||||||||  ||||||||||||||||||  |||||||||||||    
T  37857156 ggtattcaattaagatttttcatcacttaaaaaaagtcttgtggtattcaaattcattcaaattttaaaggattgtttaataaattggattttgatggat 37857255  T
Q  415 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 478  Q
    |||||          |||| ||||| | || |||||| ||||||||||||| ||||||||||||    
T  37857256 tttgt----------agtgtaatttgaacaagaaaaaatctttcatgaaaagatgagatttctt 37857309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 166 - 329
Target Start/End: Original strand, 8543408 - 8543574
Alignment:
Q  166 ggggtgtatttgatcatgattctaagggattttaaaagannnnnnnnatcatgataaagtcttgtggtattcaatcaag---actctttccaatttnnnn 262  Q
    |||||||||| ||||||||||||||||||||||||||||        ||||| | ||||| ||||||||||||||||||   ||||||| ||||||        
T  8543408 ggggtgtattagatcatgattctaagggattttaaaagattttttttatcataaaaaagttttgtggtattcaatcaagatcactcttttcaatttaaaa 8543507  T
Q  263 nnngttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaaga 329  Q
       || |||||||||| |||||| ||||||||| ||||       ||||||||||||||||| ||||    
T  8543508 aaagtgttgtgttatttaatcaagattctttgttatttaaaaaaagtcttatggtattcaattaaga 8543574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 177 - 255
Target Start/End: Original strand, 26373705 - 26373782
Alignment:
Q  177 gatcatgattctaagggattttaaaagannnnnnnnatcatgataaagtcttgtggtattcaatcaagactctttccaa 255  Q
    ||||||||||||||||||||||||||||        ||||||| |||||||||||||||||||||||||||||||||||    
T  26373705 gatcatgattctaagggattttaaaagactttttt-atcatgaaaaagtcttgtggtattcaatcaagactctttccaa 26373782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 165 - 258
Target Start/End: Complemental strand, 24214909 - 24214817
Alignment:
Q  165 aggggtgtatttgatcatgattctaagggattttaaaagannnnnnnnatcatgataaagtcttgtggtattcaatcaagactctttccaattt 258  Q
    ||||||||||| |||||||||||||| |||||||||||||        ||||| | ||||||||||||||||||||||||||||||| ||||||    
T  24214909 aggggtgtattggatcatgattctaaaggattttaaaagactttttt-atcataaaaaagtcttgtggtattcaatcaagactcttttcaattt 24214817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 421 - 485
Target Start/End: Complemental strand, 9770503 - 9770439
Alignment:
Q  421 ggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttatgattg 485  Q
    |||||||||| |||||||||| ||| ||||| | |||||| |||||||||||||||||| |||||    
T  9770503 ggattttctaatgaaattttaacataaaaaaatatttcatcaaaacatgagatttcttaggattg 9770439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 251
Target Start/End: Complemental strand, 24502088 - 24502004
Alignment:
Q  166 ggggtgtatttgatcatgattctaagggattttaaaagannnnnnnnatcatgataaagtcttgtggtattcaatcaagactcttt 251  Q
    |||||||||| |||||||||||||| |||||||||||||        ||||||| ||||||||||| ||||||||||||| |||||    
T  24502088 ggggtgtattggatcatgattctaaaggattttaaaaga-cttttttatcatgaaaaagtcttgtgttattcaatcaagattcttt 24502004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 221 - 300
Target Start/End: Complemental strand, 43166911 - 43166832
Alignment:
Q  221 aaagtcttgtggtattcaatcaagactctttccaatttnnnnnnngttttgtgttattcaatcaaaattctttgtcattt 300  Q
    ||||||||||||||||||||||||||| ||| ||||||       || ||||| ||||||||||| | ||||||||||||    
T  43166911 aaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagactctttgtcattt 43166832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 213 - 247
Target Start/End: Original strand, 32497418 - 32497452
Alignment:
Q  213 atcatgataaagtcttgtggtattcaatcaagact 247  Q
    ||||||| |||||||||||||||||||||||||||    
T  32497418 atcatgaaaaagtcttgtggtattcaatcaagact 32497452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 250
Target Start/End: Complemental strand, 24501992 - 24501963
Alignment:
Q  221 aaagtcttgtggtattcaatcaagactctt 250  Q
    ||||||||||||||||||||||||||||||    
T  24501992 aaagtcttgtggtattcaatcaagactctt 24501963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 227 - 300
Target Start/End: Complemental strand, 39190028 - 39189955
Alignment:
Q  227 ttgtggtattcaatcaagactctttccaatttnnnnnnngttttgtgttattcaatcaaaattctttgtcattt 300  Q
    ||||||||||||||||||||||||| ||||||       || ||||| |||||||| |||| ||||| ||||||    
T  39190028 ttgtggtattcaatcaagactctttgcaatttaaaaaaagtcttgtggtattcaataaaaactctttatcattt 39189955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400 (Bit Score: 173; Significance: 1e-92; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 173; E-Value: 1e-92
Query Start/End: Original strand, 213 - 509
Target Start/End: Complemental strand, 15305 - 15009
Alignment:
Q  213 atcatgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnngttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtctt 312  Q
    ||||||| ||| ||||||||||||||||||||||||||||||||||       || ||||||||||||||||| ||||||||||||||       |||||    
T  15305 atcatgaaaaaatcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtctt 15206  T
Q  313 atggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatgg 412  Q
     | |||||||||||||| | ||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15205 gtagtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatgg 15106  T
Q  413 attttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttatgattgnnnnnnncttttaagattttacta 509  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||       |||||||||||||||||    
T  15105 attttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaaatttcttaggattgtttttttcttttaagattttacta 15009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365 (Bit Score: 173; Significance: 1e-92; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 173; E-Value: 1e-92
Query Start/End: Original strand, 213 - 509
Target Start/End: Complemental strand, 15948 - 15652
Alignment:
Q  213 atcatgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnngttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtctt 312  Q
    ||||||| ||| ||||||||||||||||||||||||||||||||||       || ||||||||||||||||| ||||||||||||||       |||||    
T  15948 atcatgaaaaaatcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtctt 15849  T
Q  313 atggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatgg 412  Q
     | |||||||||||||| | ||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15848 gtagtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatgg 15749  T
Q  413 attttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttatgattgnnnnnnncttttaagattttacta 509  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||       |||||||||||||||||    
T  15748 attttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaaatttcttaggattgtttttttcttttaagattttacta 15652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 154; Significance: 2e-81; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 166 - 479
Target Start/End: Original strand, 100100 - 100412
Alignment:
Q  166 ggggtgtatttgatcatgattctaagggattttaaaagannnnnnnnatcatgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnn 265  Q
    |||||||||| ||||||||||||||||||||||||||||        ||||||| |||||||| || ||||||||||| || |||||||||||           
T  100100 ggggtgtattggatcatgattctaagggattttaaaagactttttt-atcatgaaaaagtcttctgatattcaatcaacacactttccaatttaaaaaaa 100198  T
Q  266 gttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaa 365  Q
    || ||||||||||||||||| ||||||||||||||       ||||| ||||| |||||||||| | ||||||||||       ||||||||||||||||    
T  100199 gtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtactcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaa 100298  T
Q  366 aatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 465  Q
    ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| || ||||||||||||||||||||    
T  100299 aatcattcaaatttcaaaggattgtttaataaatcaaattttgatggattttgtgggtttttctagtgaaattttaacaagaaaaagtctttcatgaaaa 100398  T
Q  466 catgagatttctta 479  Q
    ||||||||||||||    
T  100399 catgagatttctta 100412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 141; Significance: 1e-73; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 266 - 485
Target Start/End: Original strand, 102081 - 102302
Alignment:
Q  266 gttttgtgttattcaatcaaaattctttgtcatttnnnnnnng--tcttatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattc 363  Q
    |||||||||||||||||||| ||||||||||||||       |  |||| |||||||||||||||| | ||||||||||       ||||||||||||||    
T  102081 gttttgtgttattcaatcaagattctttgtcatttaaaaaaagagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattc 102180  T
Q  364 aaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaa 463  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  102181 aaaatcattcaaatttcgaaagattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcataaa 102280  T
Q  464 aacatgagatttcttatgattg 485  Q
    || |||||||||||||||||||    
T  102281 aatatgagatttcttatgattg 102302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 167 - 204
Target Start/End: Original strand, 102026 - 102063
Alignment:
Q  167 gggtgtatttgatcatgattctaagggattttaaaaga 204  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  102026 gggtgtattagatcatgattctaagggattttaaaaga 102063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 136; Significance: 1e-70; HSPs: 2)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 308 - 509
Target Start/End: Complemental strand, 38781 - 38581
Alignment:
Q  308 gtcttatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttt 407  Q
    ||||| |||||||||||||||| | ||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  38781 gtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataa-tcagatttt 38683  T
Q  408 gatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttatgattgnnnnnnncttttaagattttac 507  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||       |||||||||||||||    
T  38682 gatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttcttttaagattttac 38583  T
Q  508 ta 509  Q
    ||    
T  38582 ta 38581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 167 - 250
Target Start/End: Complemental strand, 38837 - 38755
Alignment:
Q  167 gggtgtatttgatcatgattctaagggattttaaaagannnnnnnnatcatgataaagtcttgtggtattcaatcaagactctt 250  Q
    ||||||||| ||||||||||||||||||||||||||||        ||||||| ||||||||||||||||||||||||||||||    
T  38837 gggtgtattggatcatgattctaagggattttaaaagatattttt-atcatgaaaaagtcttgtggtattcaatcaagactctt 38755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0276 (Bit Score: 129; Significance: 2e-66; HSPs: 1)
Name: scaffold0276
Description:

Target: scaffold0276; HSP #1
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 221 - 484
Target Start/End: Complemental strand, 803 - 540
Alignment:
Q  221 aaagtcttgtggtattcaatcaagactctttccaatttnnnnnnngttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtatt 320  Q
    ||||||||||||||||||||||||||||||| ||||||       || ||||||||||||||||| ||||||||||||||       || || |||||||    
T  803 aaagtcttgtggtattcaatcaagactctttacaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtattgtggtatt 704  T
Q  321 caatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtg 420  Q
    ||||||| | | ||||||||||        | ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  703 caatcaaaactcttaatcacttaaattttttttagtggtattcaaaatcattcaaatttggaaggattgtttaataaatcatattttgatggattttgtg 604  T
Q  421 ggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttatgatt 484  Q
    | |||||||||||||||||| | |||||||||||||| | ||||||||||||||||||| ||||    
T  603 gaattttctagtgaaattttggtatgaaaaagtctttgacgaaaacatgagatttcttaggatt 540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 127; Significance: 3e-65; HSPs: 2)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 269 - 485
Target Start/End: Complemental strand, 39111 - 38895
Alignment:
Q  269 ttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaat 368  Q
    ||||| ||||||||||| ||||||| ||||||       ||||| ||||||||||| |||| | ||||||||||       |||||||| ||||||||||    
T  39111 ttgtggtattcaatcaagattctttatcatttaaaaaaagtcttgtggtattcaataaagactcttaatcacttaaaagaagtctagtgatattcaaaat 39012  T
Q  369 cattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 468  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  39011 cattcaaatttggaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttggcatgaaaaagtctttcatgaaaacat 38912  T
Q  469 gagatttcttatgattg 485  Q
    |||||| |||| |||||    
T  38911 gagattccttaggattg 38895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 166 - 251
Target Start/End: Complemental strand, 39171 - 39087
Alignment:
Q  166 ggggtgtatttgatcatgattctaagggattttaaaagannnnnnnnatcatgataaagtcttgtggtattcaatcaagactcttt 251  Q
    |||||||||| |||||||||||||| |||||||||||||        ||||||| ||||||||||||||||||||||||| |||||    
T  39171 ggggtgtattggatcatgattctaatggattttaaaagactttttt-atcatgaaaaagtcttgtggtattcaatcaagattcttt 39087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 100; Significance: 4e-49; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 216 - 478
Target Start/End: Complemental strand, 39886 - 39624
Alignment:
Q  216 atgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnngttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatg 315  Q
    |||| ||||||||||||||||||||||||||| ||| ||| ||       |||||||| ||||||||||| | ||||||||||||       |||||       
T  39886 atgaaaaagtcttgtggtattcaatcaagactttttacaacttaaaaaaagttttgtggtattcaatcaagactctttgtcatttttaaaaagtcttgaa 39787  T
Q  316 gtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggatt 415  Q
     ||||||||||||||| || |||||||       |||  |||||||||||||||||||||| ||||||||||| ||||||||||  ||||||||||||||    
T  39786 ctattcaatcaagatttttcatcacttaaaaaatgtcatgtggtattcaaaatcattcaaacttcgaaggattatttaataaattggattttgatggatt 39687  T
Q  416 ttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 478  Q
    |||||||||||| ||||| ||||||| || |||||||||||||||||||| || |||||||||    
T  39686 ttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagataagatttctt 39624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0543 (Bit Score: 96; Significance: 9e-47; HSPs: 1)
Name: scaffold0543
Description:

Target: scaffold0543; HSP #1
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 216 - 478
Target Start/End: Original strand, 10498 - 10760
Alignment:
Q  216 atgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnngttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatg 315  Q
    |||| ||||||||||||||||||||||||||| ||| ||||||       || ||||| ||||||||||| | ||||||||||||       |||||  |    
T  10498 atgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgag 10597  T
Q  316 gtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggatt 415  Q
    |||||||||||||| |  | |||| ||        ||| |||||||||||||||||||||||||| ||||||||||||||||||   |||||||||||||    
T  10598 gtattcaatcaagacttctcatcatttaaaaaaaatcttgtggtattcaaaatcattcaaatttcaaaggattgtttaataaattgaattttgatggatt 10697  T
Q  416 ttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 478  Q
    || ||||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||    
T  10698 ttatgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 10760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 82; Significance: 2e-38; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 357 - 478
Target Start/End: Complemental strand, 37035 - 36914
Alignment:
Q  357 ggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctt 456  Q
    |||||||||||||||| ||||||||||| ||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || |||||||||||    
T  37035 ggtattcaaaatcattaaaatttcgaagcattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctt 36936  T
Q  457 tcatgaaaacatgagatttctt 478  Q
    ||||||||| || |||||||||    
T  36935 tcatgaaaagataagatttctt 36914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1504 (Bit Score: 81; Significance: 8e-38; HSPs: 2)
Name: scaffold1504
Description:

Target: scaffold1504; HSP #1
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 350 - 478
Target Start/End: Original strand, 936 - 1063
Alignment:
Q  350 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 449  Q
    |||| |||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||||||| ||||| ||||||| |  ||||    
T  936 gtcttgtggtattcaaaatcattcaaatttcgaagaattatttaataaat-agattttgatggattttgtgggattttgtagtgtaattttaactagaaa 1034  T
Q  450 aagtctttcatgaaaacatgagatttctt 478  Q
    ||||||||||| |||| ||||||||||||    
T  1035 aagtctttcattaaaatatgagatttctt 1063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1504; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 221 - 251
Target Start/End: Original strand, 848 - 878
Alignment:
Q  221 aaagtcttgtggtattcaatcaagactcttt 251  Q
    |||||||||||||||||||||||||||||||    
T  848 aaagtcttgtggtattcaatcaagactcttt 878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 80; Significance: 3e-37; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 355 - 478
Target Start/End: Complemental strand, 58206 - 58083
Alignment:
Q  355 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 454  Q
    ||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||||||| ||||  ||||||| || || ||| ||    
T  58206 gtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtataattttaacaagagaaaatc 58107  T
Q  455 tttcatgaaaacatgagatttctt 478  Q
    ||||||||||| ||||||||||||    
T  58106 tttcatgaaaagatgagatttctt 58083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0922 (Bit Score: 60; Significance: 3e-25; HSPs: 1)
Name: scaffold0922
Description:

Target: scaffold0922; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 221 - 415
Target Start/End: Original strand, 4143 - 4337
Alignment:
Q  221 aaagtcttgtggtattcaatcaagactctttccaatttnnnnnnngttttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtatt 320  Q
    ||||||||||||||||||||||||||| ||| ||| ||       || ||||| ||||||||||| | ||||||| ||||       |||||  ||||||    
T  4143 aaagtcttgtggtattcaatcaagactttttgcaaattaaaaaaagtcttgtggtattcaatcaagactctttgtaattttaaaaaagtcttgaggtatt 4242  T
Q  321 caatcaagattattaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggatt 415  Q
    ||||||||| | || |||| ||       |||| ||||||||||||||||||||||||| |||||||||||||||||||  ||||||||||||||    
T  4243 caatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggatt 4337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 53; Significance: 4e-21; HSPs: 2)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 269 - 478
Target Start/End: Original strand, 13873 - 14072
Alignment:
Q  269 ttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaat 368  Q
    ||||| ||||||||||| | ||||||||||||       || ||  ||||||||||||||| | || |||||||       |||| ||||||||||||||    
T  13873 ttgtggtattcaatcaagactctttgtcattttaaaaaagtattgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaat 13972  T
Q  369 cattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 468  Q
    |||||||||||| || |||||||||||||||  ||||||||||||||||||          ||||  ||||||  | |||||||||||||||||||| ||    
T  13973 cattcaaatttcaaaagattgtttaataaattggattttgatggattttgt----------agtgggattttaataagaaaaagtctttcatgaaaagat 14062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 251
Target Start/End: Original strand, 13862 - 13897
Alignment:
Q  216 atgataaagtcttgtggtattcaatcaagactcttt 251  Q
    |||| |||||||||||||||||||||||||||||||    
T  13862 atgaaaaagtcttgtggtattcaatcaagactcttt 13897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 53; Significance: 4e-21; HSPs: 4)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 269 - 419
Target Start/End: Complemental strand, 21454 - 21304
Alignment:
Q  269 ttgtgttattcaatcaaaattctttgtcatttnnnnnnngtcttatggtattcaatcaagattattaatcacttnnnnnnngtctagtggtattcaaaat 368  Q
    ||||| ||||||||||| | ||||||||||||       || ||  ||||||||||||||| | || |||||||       |||| ||||||||||||||    
T  21454 ttgtggtattcaatcaagactctttgtcattttaaaaaagtattgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaat 21355  T
Q  369 cattcaaatttcgaaggattgtttaataaatcagattttgatggattttgt 419  Q
    |||||||||||| || |||||||||||||||  ||||||||||||||||||    
T  21354 cattcaaatttcaaaagattgtttaataaattggattttgatggattttgt 21304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 251
Target Start/End: Complemental strand, 21465 - 21430
Alignment:
Q  216 atgataaagtcttgtggtattcaatcaagactcttt 251  Q
    |||| |||||||||||||||||||||||||||||||    
T  21465 atgaaaaagtcttgtggtattcaatcaagactcttt 21430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152; HSP #3
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 446 - 478
Target Start/End: Complemental strand, 21287 - 21255
Alignment:
Q  446 gaaaaagtctttcatgaaaacatgagatttctt 478  Q
    |||||||||||||||||||| ||||||||||||    
T  21287 gaaaaagtctttcatgaaaagatgagatttctt 21255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152; HSP #4
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 446 - 478
Target Start/End: Original strand, 28510 - 28542
Alignment:
Q  446 gaaaaagtctttcatgaaaacatgagatttctt 478  Q
    |||||||||||||||||||| ||||||||||||    
T  28510 gaaaaagtctttcatgaaaagatgagatttctt 28542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 410 - 485
Target Start/End: Original strand, 14892 - 14967
Alignment:
Q  410 tggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttatgattg 485  Q
    |||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||| |||||    
T  14892 tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttaagattg 14967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0839 (Bit Score: 51; Significance: 7e-20; HSPs: 1)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 379 - 465
Target Start/End: Complemental strand, 3798 - 3712
Alignment:
Q  379 tcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 465  Q
    ||||| |||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || ||||| ||||||||| ||||    
T  3798 tcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaggtctttcataaaaa 3712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0651 (Bit Score: 50; Significance: 3e-19; HSPs: 1)
Name: scaffold0651
Description:

Target: scaffold0651; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 169 - 300
Target Start/End: Original strand, 8654 - 8784
Alignment:
Q  169 gtgtatttgatcatgattctaagggattttaaaagannnnnnnnatcatgataaagtcttgtggtattcaatcaagactctttccaatttnnnnnnngtt 268  Q
    ||||||| ||||||||||||||||||||||||||||        ||||||| ||||| ||||||||||||||||||||| ||| ||||||       ||     
T  8654 gtgtattggatcatgattctaagggattttaaaagattttttt-atcatgaaaaagtattgtggtattcaatcaagacttttttcaatttaaaaaaagtc 8752  T
Q  269 ttgtgttattcaatcaaaattctttgtcattt 300  Q
    |||||||||| |||||| ||||||||||||||    
T  8753 ttgtgttatttaatcaagattctttgtcattt 8784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 358 - 451
Target Start/End: Original strand, 199905 - 199998
Alignment:
Q  358 gtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaa 451  Q
    ||||| |||||||||||||||| ||| || ||||||||||||   |||||||| ||||||||| |||||| |||||||| ||||| || |||||    
T  199905 gtatttaaaatcattcaaattttgaaagagtgtttaataaattgaattttgattgattttgtgagattttttagtgaaactttagtataaaaaa 199998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 31; Significance: 0.00000006; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 221 - 251
Target Start/End: Original strand, 233722 - 233752
Alignment:
Q  221 aaagtcttgtggtattcaatcaagactcttt 251  Q
    |||||||||||||||||||||||||||||||    
T  233722 aaagtcttgtggtattcaatcaagactcttt 233752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 221 - 251
Target Start/End: Original strand, 234570 - 234600
Alignment:
Q  221 aaagtcttgtggtattcaatcaagactcttt 251  Q
    |||||||||||||||||||||||||||||||    
T  234570 aaagtcttgtggtattcaatcaagactcttt 234600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University