View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5131-Insertion-9 (Length: 251)
Name: NF5131-Insertion-9
Description: NF5131
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5131-Insertion-9 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 171; Significance: 6e-92; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 8 - 251
Target Start/End: Complemental strand, 28421347 - 28421105
Alignment:
| Q |
8 |
agaacaacaatatttcctcggatattcgcagaaatggatcaataattttctcagaaatcaatgtttatgacgaattcaggatgtttttcgacgaataaat |
107 |
Q |
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| T |
28421347 |
agaacaacaatatttcctcggaaattcgcagaaatagatcaataatttcctcagaaatcaatgtttctgacgaatttaggatgtttttcaacgaataaat |
28421248 |
T |
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| Q |
108 |
tcataggaaaaccagtcattttgtgtattgttgttaacaatgattcctacttaaattgagatnnnnnnnntgttttctctcttaataaggacagtgctac |
207 |
Q |
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| T |
28421247 |
tcataggaaaatcagttatttcgtgtagtgttgttaacaatgattcatacttaaattgagat-aaaaaaatgttttctctcttaataaggacagtgctac |
28421149 |
T |
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| Q |
208 |
taatgactttggagcttaattctatcaaacttattggactattg |
251 |
Q |
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| T |
28421148 |
taatgactttggagcttaattctatcaaacttattggactattg |
28421105 |
T |
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