View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5133-Insertion-3 (Length: 128)
Name: NF5133-Insertion-3
Description: NF5133
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5133-Insertion-3 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 121; Significance: 2e-62; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 121; E-Value: 2e-62
Query Start/End: Original strand, 8 - 128
Target Start/End: Complemental strand, 48092893 - 48092773
Alignment:
| Q |
8 |
ctgcacgttgtagctcaactgagcatcccccatttgtgcctcgttgtgctaattctgctggaacacaaccaattggacctgttcctgtcactatcaccct |
107 |
Q |
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| T |
48092893 |
ctgcacgttgtagctcaactgagcatcccccatttgtgcctcgttgtgctaattctgctggaacacaaccaattggacctgttcctgtcactatcaccct |
48092794 |
T |
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| Q |
108 |
acgtgctccaagatcgtatag |
128 |
Q |
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| T |
48092793 |
acgtgctccaagatcgtatag |
48092773 |
T |
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Target: chr1 (Bit Score: 39; Significance: 0.0000000000002; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 55 - 121
Target Start/End: Original strand, 35354416 - 35354482
Alignment:
| Q |
55 |
gctaattctgctggaacacaaccaattggacctgttcctgtcactatcaccctacgtgctccaagat |
121 |
Q |
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| T |
35354416 |
gctaatgctgctggagcacaacccattggacctgttcctgacaccagaaccctacgtgctccaagat |
35354482 |
T |
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