View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5134-Insertion-4 (Length: 305)
Name: NF5134-Insertion-4
Description: NF5134
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5134-Insertion-4 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 32 - 305
Target Start/End: Complemental strand, 5051198 - 5050925
Alignment:
| Q |
32 |
aattaataacaatttattctactttttattgatgttgatgtttaaaacgttcggtcttatttttcataatggtcgatgtttttcataattgcggggaaat |
131 |
Q |
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| T |
5051198 |
aattaataacaatttattctactttttgttgatgttgatgtttaaaaggttcggtcttatttttcataatggtcgatgtttttcataattgctaggaaat |
5051099 |
T |
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| Q |
132 |
taaagaagcagccaattgttgttcgttcctcttcaaagaatatcatgcttgggcatttcttacgatgaagcaactcctctgctgttatggccttccatga |
231 |
Q |
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| T |
5051098 |
taaagaagcagcctattgttgttcgttcctcttcaaagaatatcatgcttgggcatttcttacgatgaagcaaatcctctgctgttatggccttccatgg |
5050999 |
T |
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| Q |
232 |
gagtcagtcaactattcaattagctagtaatcctttgtaccacccaattttacttgggagtatgggccgtttgg |
305 |
Q |
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|||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| ||||||||| |
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| T |
5050998 |
gagtcaatcaactattcaattagctagtaatcctttgtaccacccaattttatttgtgagtatgtgccgtttgg |
5050925 |
T |
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