View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5137_high_3 (Length: 358)

Name: NF5137_high_3
Description: NF5137
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5137_high_3
NF5137_high_3
[»] chr3 (11 HSPs)
chr3 (2-115)||(18538356-18538469)
chr3 (2-115)||(18534998-18535111)
chr3 (237-338)||(18534434-18534535)
chr3 (123-216)||(18534569-18534660)
chr3 (237-339)||(18705536-18705638)
chr3 (278-339)||(3290653-3290713)
chr3 (164-216)||(20102050-20102102)
chr3 (237-291)||(24177922-24177977)
chr3 (254-335)||(3593068-3593149)
chr3 (237-281)||(3262321-3262366)
chr3 (246-314)||(30993274-30993343)
[»] chr8 (3 HSPs)
chr8 (246-339)||(17290611-17290705)
chr8 (261-337)||(6465704-6465780)
chr8 (280-336)||(40391396-40391452)
[»] chr1 (4 HSPs)
chr1 (239-339)||(18513832-18513934)
chr1 (264-321)||(9131712-9131769)
chr1 (253-339)||(23632177-23632264)
chr1 (258-336)||(12786235-12786315)
[»] chr5 (2 HSPs)
chr5 (246-336)||(39435973-39436062)
chr5 (258-335)||(39176440-39176519)
[»] chr6 (1 HSPs)
chr6 (238-336)||(9548733-9548833)
[»] chr4 (3 HSPs)
chr4 (237-339)||(19611934-19612036)
chr4 (237-339)||(25126248-25126349)
chr4 (254-318)||(15706677-15706742)
[»] scaffold0088 (1 HSPs)
scaffold0088 (246-339)||(35502-35596)
[»] chr2 (3 HSPs)
chr2 (283-339)||(27386950-27387006)
chr2 (289-339)||(32623614-32623664)
chr2 (256-339)||(16093522-16093605)
[»] scaffold0094 (1 HSPs)
scaffold0094 (237-326)||(48232-48322)
[»] chr7 (3 HSPs)
chr7 (246-336)||(32945336-32945425)
chr7 (237-338)||(3312618-3312718)
chr7 (253-338)||(3310934-3311017)
[»] scaffold0281 (1 HSPs)
scaffold0281 (248-336)||(1834-1922)


Alignment Details
Target: chr3 (Bit Score: 102; Significance: 1e-50; HSPs: 11)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 2 - 115
Target Start/End: Complemental strand, 18538469 - 18538356
Alignment:
Q  2 aattaaataaaagaatttacatcacagtgactcggaaagcaagataggtcgattacacaggaacaataactcagctcctatacacaattgaaaatggttc 101  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  18538469 aattaaataaaagaatttatatcacagtgactcggaaagcaagataggtcgattacacaggtacaataactcagctcctaaacacaattgaaaatggttc 18538370  T
Q  102 aaggaatatatatt 115  Q
    ||||||||||||||    
T  18538369 aaggaatatatatt 18538356  T

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Target: chr3; HSP #2
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 2 - 115
Target Start/End: Complemental strand, 18535111 - 18534998
Alignment:
Q  2 aattaaataaaagaatttacatcacagtgactcggaaagcaagataggtcgattacacaggaacaataactcagctcctatacacaattgaaaatggttc 101  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| | |||||||||||||||||||    
T  18535111 aattaaataaaagaatttatatcacagtgactcggaaagcaagataggtcgattacacaggtacaataactcagctcccaaacacaattgaaaatggttc 18535012  T
Q  102 aaggaatatatatt 115  Q
    ||||||||||||||    
T  18535011 aaggaatatatatt 18534998  T

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Target: chr3; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 237 - 338
Target Start/End: Complemental strand, 18534535 - 18534434
Alignment:
Q  237 ccttcactaccatatattcatacaatccttatgctgaatagagactccctcttacctctaattttgcgaaattgatgatttcctatggttaaatctctct 336  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||||||    
T  18534535 ccttcactaccatatgttcatacaatccttatggtgaatagagactcccccttacctctagttttgcgaaattgatgatttcctatggttgaatctctct 18534436  T
Q  337 ct 338  Q
    ||    
T  18534435 ct 18534434  T

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Target: chr3; HSP #4
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 123 - 216
Target Start/End: Complemental strand, 18534660 - 18534569
Alignment:
Q  123 agaatcaattcatagactatataaatcaaacataaagccatagcaacatgagagaacacaatttaacaaagattcatcacagtttataaactac 216  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  18534660 agaatcaattcatagactata--aatcaaacataaagccatagcaacatgagagaacacaatttaacaaagattcatcacaatttataaactac 18534569  T

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Target: chr3; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 237 - 339
Target Start/End: Complemental strand, 18705638 - 18705536
Alignment:
Q  237 ccttcactaccat-atattcatacaatccttatgctgaatagagactccctcttacctctaattttgcgaaattgatgatttcctatggttaaatctctc 335  Q
    ||||||||||| | || ||||||||| ||||||| | ||||||||||||| | |||||||| |||| |||||||||||||||| |||||| |||||||||    
T  18705638 ccttcactacccttatgttcatacaa-ccttatggtaaatagagactcccccatacctctagttttacgaaattgatgatttcatatggtgaaatctctc 18705540  T
Q  336 tcta 339  Q
    ||||    
T  18705539 tcta 18705536  T

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Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 278 - 339
Target Start/End: Original strand, 3290653 - 3290713
Alignment:
Q  278 agactccctcttacctctaattttgcgaaattgatgatttcctatggttaaatctctctcta 339  Q
    |||||||| ||||| |||| |||||||||||||||||||||||| ||||||||| |||||||    
T  3290653 agactcccccttac-tctagttttgcgaaattgatgatttcctacggttaaatccctctcta 3290713  T

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Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 164 - 216
Target Start/End: Complemental strand, 20102102 - 20102050
Alignment:
Q  164 agcaacatgagagaacacaatttaacaaagattcatcacagtttataaactac 216  Q
    |||||||| |||||||  |||||||||||||| ||||||| ||||||||||||    
T  20102102 agcaacataagagaacgaaatttaacaaagatccatcacaatttataaactac 20102050  T

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Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 237 - 291
Target Start/End: Complemental strand, 24177977 - 24177922
Alignment:
Q  237 ccttcactacc-atatattcatacaatccttatgctgaatagagactccctcttac 291  Q
    ||||||||||| |||| |||||| |||||||||| ||||||||||||||| |||||    
T  24177977 ccttcactacccatatgttcatagaatccttatggtgaatagagactcccccttac 24177922  T

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Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 254 - 335
Target Start/End: Original strand, 3593068 - 3593149
Alignment:
Q  254 tcatacaatccttatgctgaatagagactc-cctcttacctctaattttgcgaaattgatgatttcctatggttaaatctctc 335  Q
    |||||||| ||||||| ||||||||||||| || ||||||||| | |||||  |||||||||||||||| ||  |||||||||    
T  3593068 tcatacaacccttatgatgaatagagactctccccttacctct-agtttgccgaattgatgatttcctacggagaaatctctc 3593149  T

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Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 281
Target Start/End: Complemental strand, 3262366 - 3262321
Alignment:
Q  237 ccttcactacc-atatattcatacaatccttatgctgaatagagac 281  Q
    ||||||||||| |||| ||||||||||||||||| |||||||||||    
T  3262366 ccttcactacccatatgttcatacaatccttatggtgaatagagac 3262321  T

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Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 314
Target Start/End: Complemental strand, 30993343 - 30993274
Alignment:
Q  246 ccatatattcatacaatccttatgctgaatagagact-ccctcttacctctaattttgcgaaattgatga 314  Q
    |||||| ||||||||| ||||||| |||||||||||| ||| |||||||||| ||| | ||| |||||||    
T  30993343 ccatatgttcatacaacccttatggtgaatagagactccccccttacctctagtttggagaatttgatga 30993274  T

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Target: chr8 (Bit Score: 55; Significance: 1e-22; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 246 - 339
Target Start/End: Original strand, 17290611 - 17290705
Alignment:
Q  246 ccatatattcatacaatccttatgctgaatagagactccctc-ttacctctaattttgcgaaattgatgatttcctatggttaaatctctctcta 339  Q
    |||||||||||||||| ||||||| ||||||||||||||| | ||||||||||||||| ||||||||| ||||| || ||| |||||||||||||    
T  17290611 ccatatattcatacaacccttatggtgaatagagactccccccttacctctaattttgagaaattgataatttcatacggtaaaatctctctcta 17290705  T

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Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 261 - 337
Target Start/End: Original strand, 6465704 - 6465780
Alignment:
Q  261 atccttatgctgaatagagactccctcttacctctaattttgcgaaattgatgatttcctatggttaaatctctctc 337  Q
    ||||||||| |||||||||||||||| ||||||||| ||  | ||| ||||||| || |||| || |||||||||||    
T  6465704 atccttatggtgaatagagactcccttttacctctagttcggagaatttgatgaatttctatagtaaaatctctctc 6465780  T

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Target: chr8; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 336
Target Start/End: Original strand, 40391396 - 40391452
Alignment:
Q  280 actccctcttacctctaattttgcgaaattgatgatttcctatggttaaatctctct 336  Q
    |||||| |||||||||| |||||||||||||||| ||| ||| | | ||||||||||    
T  40391396 actcccccttacctctagttttgcgaaattgatggttttctaagttgaaatctctct 40391452  T

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Target: chr1 (Bit Score: 55; Significance: 1e-22; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 239 - 339
Target Start/End: Complemental strand, 18513934 - 18513832
Alignment:
Q  239 ttcactacc-atatattcatacaatccttatgctgaatagagact-ccctcttacctctaattttgcgaaattgatgatttcctatggttaaatctctct 336  Q
    ||||||||| |||| ||||||||| ||||||| |||||||||||| ||| ||||||| || |||||||||||||||||||||||||| | ||||||||||    
T  18513934 ttcactacctatatgttcatacaacccttatggtgaatagagacttcccccttacctttagttttgcgaaattgatgatttcctatgttaaaatctctct 18513835  T
Q  337 cta 339  Q
    |||    
T  18513834 cta 18513832  T

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Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 264 - 321
Target Start/End: Complemental strand, 9131769 - 9131712
Alignment:
Q  264 cttatgctgaatagagactccctcttacctctaattttgcgaaattgatgatttccta 321  Q
    |||||| ||||||||||||||  |||||||| | ||||||||||||||||||||||||    
T  9131769 cttatggtgaatagagactcctccttacctcgagttttgcgaaattgatgatttccta 9131712  T

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Target: chr1; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 253 - 339
Target Start/End: Complemental strand, 23632264 - 23632177
Alignment:
Q  253 ttcatacaatccttatgctgaatagagactccctc-ttacctctaattttgcgaaattgatgatttcctatggttaaatctctctcta 339  Q
    ||||| ||| || |||||| |||||| |||||| | ||||||||| |||| |||| ||||||| |||||| ||| |||||||||||||    
T  23632264 ttcatgcaacccatatgctaaatagaaactccccccttacctctagtttttcgaatttgatgagttcctacggtgaaatctctctcta 23632177  T

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Target: chr1; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 336
Target Start/End: Original strand, 12786235 - 12786315
Alignment:
Q  258 acaatccttatgctgaatagagactccctc--ttacctctaattttgcgaaattgatgatttcctatggttaaatctctct 336  Q
    |||| ||||||| ||||||||||||||| |  ||||||||| ||| | ||| ||||||| |||||| ||| ||||||||||    
T  12786235 acaacccttatgatgaatagagactccccccattacctctagtttggagaatttgatgaattcctacggtgaaatctctct 12786315  T

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Target: chr5 (Bit Score: 51; Significance: 4e-20; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 246 - 336
Target Start/End: Complemental strand, 39436062 - 39435973
Alignment:
Q  246 ccatatattcatacaatccttatgctgaatagagactccctcttacctctaattttgcgaaattgatgatttcctatggttaaatctctct 336  Q
    |||||| |||||||| || ||||| ||||||||||||||| |||||||||| ||||| |||||||||||||||||| ||| ||||||||||    
T  39436062 ccatatgttcatacagtc-ttatggtgaatagagactcccccttacctctagttttgtgaaattgatgatttcctacggtgaaatctctct 39435973  T

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Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 258 - 335
Target Start/End: Original strand, 39176440 - 39176519
Alignment:
Q  258 acaatccttatgctgaatagagactccctc--ttacctctaattttgcgaaattgatgatttcctatggttaaatctctc 335  Q
    |||| ||||||| |||||||||||| || |  ||||||||| |||||||||||||||||||| ||||||| |||||||||    
T  39176440 acaacccttatgatgaatagagacttcccccattacctctagttttgcgaaattgatgattttctatggtgaaatctctc 39176519  T

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Target: chr6 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 238 - 336
Target Start/End: Original strand, 9548733 - 9548833
Alignment:
Q  238 cttcactaccatatattcatacaatccttatgctgaatagagactccctc-ttacctctaatttt-gcgaaattgatgatttcctatggttaaatctctc 335  Q
    ||||||||||||||  |||||||| ||||||| |||| |||||||||| | ||| ||||| |||| |||||||||||||||||||| ||| |||||||||    
T  9548733 cttcactaccatatgatcatacaacccttatgatgaacagagactccccccttatctctagtttttgcgaaattgatgatttcctacggtgaaatctctc 9548832  T
Q  336 t 336  Q
    |    
T  9548833 t 9548833  T

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Target: chr4 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 3)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 237 - 339
Target Start/End: Complemental strand, 19612036 - 19611934
Alignment:
Q  237 ccttcactacc-atatattcatacaatccttatgctgaatagagactccctct-tacctctaattttgcgaaattgatgatttcctatggttaaatctct 334  Q
    ||||||||||| |||| ||||| ||| ||||||| ||||||||||||||| |  |||||||||||||||||||||||||||| |||| | | ||||||||    
T  19612036 ccttcactacctatatgttcatgcaa-ccttatg-tgaatagagactccccccatacctctaattttgcgaaattgatgattccctacgatgaaatctct 19611939  T
Q  335 ctcta 339  Q
    |||||    
T  19611938 ctcta 19611934  T

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Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 237 - 339
Target Start/End: Complemental strand, 25126349 - 25126248
Alignment:
Q  237 ccttcactacc-atatattcatacaatccttatgctgaatagagactccctct-tacctctaattttgcgaaattgatgatttcctatggttaaatctct 334  Q
    ||||||||||| |||| || |||||| |||||||   ||||||||||||| |  |||||||| |||||||||||||||||||||||| | | |||| |||    
T  25126349 ccttcactacctatatgtttatacaacccttatg---aatagagactccccccatacctctagttttgcgaaattgatgatttcctacgttcaaatttct 25126253  T
Q  335 ctcta 339  Q
    |||||    
T  25126252 ctcta 25126248  T

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Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 254 - 318
Target Start/End: Original strand, 15706677 - 15706742
Alignment:
Q  254 tcatacaatccttatgctgaatagagactccctc-ttacctctaattttgcgaaattgatgatttc 318  Q
    ||||||||  |||| | ||||||||||||||| | ||||||||| |||||||||||||||||||||    
T  15706677 tcatacaactcttacggtgaatagagactcccccattacctctagttttgcgaaattgatgatttc 15706742  T

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Target: scaffold0088 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 246 - 339
Target Start/End: Complemental strand, 35596 - 35502
Alignment:
Q  246 ccatatattcatacaatccttatgctgaatagagactccctc-ttacctctaattttgcgaaattgatgatttcctatggttaaatctctctcta 339  Q
    |||||| || |||||| ||||| ||||||||||||||||| | ||||||||| |||  |||| ||||||| |||||| ||| |||||||||||||    
T  35596 ccatatgttgatacaacccttacgctgaatagagactccccccttacctctagtttgtcgaatttgatgagttcctacggtgaaatctctctcta 35502  T

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Target: chr2 (Bit Score: 37; Significance: 0.000000000008; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 283 - 339
Target Start/End: Complemental strand, 27387006 - 27386950
Alignment:
Q  283 ccctcttacctctaattttgcgaaattgatgatttcctatggttaaatctctctcta 339  Q
    |||||||||||||| |||||||||||| ||||||| ||| ||| |||||||||||||    
T  27387006 ccctcttacctctagttttgcgaaattaatgattttctacggtgaaatctctctcta 27386950  T

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Target: chr2; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 339
Target Start/End: Complemental strand, 32623664 - 32623614
Alignment:
Q  289 tacctctaattttgcgaaattgatgatttcctatggttaaatctctctcta 339  Q
    |||||||| |||||| ||||||||||||| ||| ||| |||||||||||||    
T  32623664 tacctctagttttgcaaaattgatgattttctacggtgaaatctctctcta 32623614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 339
Target Start/End: Original strand, 16093522 - 16093605
Alignment:
Q  256 atacaatccttatgctgaatagagact-ccctcttacctctaattttgcgaaattgatgatttcctatggttaaatctctctcta 339  Q
    |||||| ||||||| |||||||||||| ||||||||||||| | ||||| ||| |||||| || |||  || |||||||||||||    
T  16093522 atacaacccttatggtgaatagagactcccctcttacctct-agtttgcaaaagtgatgaatttctacagtgaaatctctctcta 16093605  T

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Target: scaffold0094 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0094
Description:

Target: scaffold0094; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 237 - 326
Target Start/End: Original strand, 48232 - 48322
Alignment:
Q  237 ccttcactacc-atatattcatacaatccttatgctgaatagagact-ccctcttacctctaattttgcgaaattgatgatttcctatggtt 326  Q
    ||||||||||| ||||  |||||||||||||||| |||||||||||| ||| |||||||||| |||| || ||||||||| |||||| ||||    
T  48232 ccttcactacccatatgatcatacaatccttatggtgaatagagactccccccttacctctagttttccg-aattgatgaattcctacggtt 48322  T

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Target: chr7 (Bit Score: 36; Significance: 0.00000000003; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 246 - 336
Target Start/End: Original strand, 32945336 - 32945425
Alignment:
Q  246 ccatatattcatacaatccttatgctgaatagagactccctc-ttacctctaattttgcgaaattgatgatttcctatggttaaatctctct 336  Q
    |||||| ||||||||| ||||||| |||||| | |||||| | ||||||||| |||||||||||||||||||||||| | | ||||||||||    
T  32945336 ccatatgttcatacaa-ccttatgatgaatata-actccccccttacctctagttttgcgaaattgatgatttcctacgttgaaatctctct 32945425  T

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Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 237 - 338
Target Start/End: Original strand, 3312618 - 3312718
Alignment:
Q  237 ccttcactacc-atatattcatacaatccttatgctgaatagagactccctcttacctctaattttgcgaaattgatgatttcctatggttaaatctctc 335  Q
    ||||||||||| | |||||||||||| ||||||  ||||||||||||||| |||| ||||| |||  |||| ||||||| |||||| |||| ||||||||    
T  3312618 ccttcactacccacatattcatacaacccttata-tgaatagagactcccccttatctctagtttgccgaa-ttgatgacttcctacggttgaatctctc 3312715  T
Q  336 tct 338  Q
    |||    
T  3312716 tct 3312718  T

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Target: chr7; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 253 - 338
Target Start/End: Original strand, 3310934 - 3311017
Alignment:
Q  253 ttcatacaatccttatgctgaatagagactccctcttacctctaattttgcgaaattgatgatttcctatggttaaatctctctct 338  Q
    ||||||||| ||||||  ||||||||||||||| |||||||||| |||  || ||||||||| ||||||  ||| |||||||||||    
T  3310934 ttcatacaacccttata-tgaatagagactcccccttacctctagtttgtcg-aattgatgacttcctactgttgaatctctctct 3311017  T

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Target: scaffold0281 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0281
Description:

Target: scaffold0281; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 248 - 336
Target Start/End: Original strand, 1834 - 1922
Alignment:
Q  248 atatattcatacaatccttatgctgaatagagact-ccctcttacctctaattttgcgaaattgatgatttcctatggttaaatctctct 336  Q
    |||||||||||||| ||||||| | |||||||||| ||| | ||||||| | |||||  |||||||||||||||| ||| ||||||||||    
T  1834 atatattcatacaacccttatggtaaatagagactccccccatacctct-agtttgcagaattgatgatttcctacggtgaaatctctct 1922  T

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