View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF5139_1D_high_8 (Length: 364)
Name: NF5139_1D_high_8
Description: NF5139_1D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5139_1D_high_8 |
 | |
|
| [»] scaffold0596 (1 HSPs) |
| | |
|
| [»] scaffold0045 (1 HSPs) |
| | |
|
| [»] scaffold0035 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 230; Significance: 1e-127; HSPs: 5)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 2 - 341
Target Start/End: Original strand, 43070927 - 43071270
Alignment:
| Q |
2 |
caaagttagggaaaagttacagga-----gatttaggatatatgtatagcatcatcttcaacacacctggctgatacgatgccgcagacgacaacggcgg |
96 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||| |||| | ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
43070927 |
caaagttagggaaaagttacaggaacaacgatttaggatatat--atagtagcatcttcaacacacctggctgatacgatgccgcagacgacaacggcga |
43071024 |
T |
|
| Q |
97 |
aggggatgttgtaatcgagagcattggtgaagggcgacgataggagagagctgcgacgacggagagagcggcaacgacagcgaattttgtatgaatgtct |
196 |
Q |
| |
|
||| ||||| | |||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| ||| ||||||||| ||||||||| |
|
|
| T |
43071025 |
aggtgatgtcggaatcgagagcattggtgaagggcgacgacaggagagagctgcggcgacggagagagcggcaacggcagagaattttgtttgaatgtct |
43071124 |
T |
|
| Q |
197 |
gagagtgaggtggaagataaacaactcaaagggcgaagagannnnnnngagaaaaagcaatctgaattccaacacataaagaaggaataatgggagagga |
296 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
43071125 |
gagagtgaggtggaagatgaacaactcaaagggcgaagagatttttttgagtaaaagcaatctgaattccaacacataaagaaggaataatgggagagga |
43071224 |
T |
|
| Q |
297 |
gagaagagaactt-aaaatgaaggagaaagaggtggacatagataa |
341 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||| ||||| |
|
|
| T |
43071225 |
gagaagagaacttaaaaatgaaggagaaagaggtggacatcgataa |
43071270 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 63 - 341
Target Start/End: Complemental strand, 1262601 - 1262321
Alignment:
| Q |
63 |
ctggctgatacgatgccgcagacgacaacggcggaggggatgttgtaatcgagagcattggtgaagggcgacgataggagagagctgcgacgacggagag |
162 |
Q |
| |
|
|||||||||||||||||||| |||||||||||| ||| ||||| | |||||||||||||||||||||||||||| |||||||||||||| ||||||||| |
|
|
| T |
1262601 |
ctggctgatacgatgccgcatacgacaacggcgaaggtgatgtcggaatcgagagcattggtgaagggcgacgacaggagagagctgcggcgacggagaa |
1262502 |
T |
|
| Q |
163 |
agcggcaacgacagcgaattttgtatgaatgtctgagagtgaggtggaagataaacaactcaaagggcgaagagannnnnnngagaaaaagcaatctgaa |
262 |
Q |
| |
|
|||||||||| ||| ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| ||| ||||||||| |||| |
|
|
| T |
1262501 |
agcggcaacggcagagaattttgtttgaatgtctgagagtgaggtggaagatgaacaactcaaagggcgaagagattttttcgagtaaaagcaatatgaa |
1262402 |
T |
|
| Q |
263 |
ttccaacacataaagaaggaataatgggagaggagagaagagaactt--aaaatgaaggagaaagaggtggacatagataa |
341 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||| ||||| |
|
|
| T |
1262401 |
ttccaacacataaagaaggaataatgggagaggagagaagagaacttaaaaaatgaaggagaaagaggtgaacatcgataa |
1262321 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 63 - 237
Target Start/End: Original strand, 48849391 - 48849565
Alignment:
| Q |
63 |
ctggctgatacgatgccgcagacgacaacggcggaggggatgttgtaatcgagagcattggtgaagggcgacgataggagagagctgcgacgacggagag |
162 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||| ||||| | |||||||||||||||||||||||||||| |||||||||||||| ||||||||| |
|
|
| T |
48849391 |
ctggctgatacgatgccgcagacgacaacggcgaaggtgatgtcggaatcgagagcattggtgaagggcgacgaaaggagagagctgcggcgacggagaa |
48849490 |
T |
|
| Q |
163 |
agcggcaacgacagcgaattttgtatgaatgtctgagagtgaggtggaagataaacaactcaaagggcgaagaga |
237 |
Q |
| |
|
|||||||||| ||| ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
48849491 |
agcggcaacggcagagaattttgtttgaatgtctgagagtgaggtggaagatgaacaactcaaagggcgaagaga |
48849565 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 249 - 341
Target Start/End: Original strand, 48849601 - 48849695
Alignment:
| Q |
249 |
aaaagcaatctgaattccaacacataaagaaggaataatgggagaggagagaagagaactt--aaaatgaaggagaaagaggtggacatagataa |
341 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| |||| ||||| |
|
|
| T |
48849601 |
aaaagcaatctgaattccaacacataaagaaggaataatgggagatgagagaagagaacttaaaaaatgaaggagaaagaggtgaacatcgataa |
48849695 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 276 - 341
Target Start/End: Original strand, 26909806 - 26909873
Alignment:
| Q |
276 |
agaaggaataatgggagaggagagaagagaac--ttaaaatgaaggagaaagaggtggacatagataa |
341 |
Q |
| |
|
||||||||||||||||||||||| |||||||| | ||||||||||||||| |||||| ||| ||||| |
|
|
| T |
26909806 |
agaaggaataatgggagaggagaaaagagaacgttaaaaatgaaggagaaaaaggtgggcatggataa |
26909873 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 230; Significance: 1e-127; HSPs: 4)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 2 - 341
Target Start/End: Original strand, 23348525 - 23348868
Alignment:
| Q |
2 |
caaagttagggaaaagttacagga-----gatttaggatatatgtatagcatcatcttcaacacacctggctgatacgatgccgcagacgacaacggcgg |
96 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||| |||| | ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23348525 |
caaagttagggaaaagttacaggaacaacgatttaggatatat--atagtagcatcttcaacacacctggctgatacgatgccgcagacgacaacggcga |
23348622 |
T |
|
| Q |
97 |
aggggatgttgtaatcgagagcattggtgaagggcgacgataggagagagctgcgacgacggagagagcggcaacgacagcgaattttgtatgaatgtct |
196 |
Q |
| |
|
||| ||||| | |||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| ||| ||||||||| ||||||||| |
|
|
| T |
23348623 |
aggtgatgtcggaatcgagagcattggtgaagggcgacgacaggagagagctgcggcgacggagagagcggcaacggcagagaattttgtttgaatgtct |
23348722 |
T |
|
| Q |
197 |
gagagtgaggtggaagataaacaactcaaagggcgaagagannnnnnngagaaaaagcaatctgaattccaacacataaagaaggaataatgggagagga |
296 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23348723 |
gagagtgaggtggaagatgaacaactcaaagggcgaagagatttttttgagtaaaagcaatctgaattccaacacataaagaaggaataatgggagagga |
23348822 |
T |
|
| Q |
297 |
gagaagagaactt-aaaatgaaggagaaagaggtggacatagataa |
341 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||| ||||| |
|
|
| T |
23348823 |
gagaagagaacttaaaaatgaaggagaaagaggtggacatcgataa |
23348868 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 2 - 341
Target Start/End: Complemental strand, 12742264 - 12741921
Alignment:
| Q |
2 |
caaagttagggaaaagttacagga-----gatttaggatatatgtatagcatcatcttcaacacacctggctgatacgatgccgcagacgacaacggcgg |
96 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||| |||| | |||||||||||||||| ||||||||||||||||||||||||||| || |
|
|
| T |
12742264 |
caaagttagggaaaagttacaggaacaacgatttaggatatat--atagtagcatcttcaacacaccttgctgatacgatgccgcagacgacaacgacga |
12742167 |
T |
|
| Q |
97 |
aggggatgttgtaatcgagagcattggtgaagggcgacgataggagagagctgcgacgacggagagagcggcaacgacagcgaattttgtatgaatgtct |
196 |
Q |
| |
|
||| ||||| | |||||||||||||||||||||||||||| |||||||||||||| || ||||||||||||||||| ||| ||||||||| ||||||||| |
|
|
| T |
12742166 |
aggtgatgtcggaatcgagagcattggtgaagggcgacgacaggagagagctgcggcggcggagagagcggcaacggcagagaattttgtttgaatgtct |
12742067 |
T |
|
| Q |
197 |
gagagtgaggtggaagataaacaactcaaagggcgaagagannnnnnngagaaaaagcaatctgaattccaacacataaagaaggaataatgggagagga |
296 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12742066 |
gagagtgaggtggaagatgaacaactcaaagggcgaagagatttttttgagtaaaagcaatctgaattccaacacataaagaaggaataatgggagagga |
12741967 |
T |
|
| Q |
297 |
gagaagagaactt-aaaatgaaggagaaagaggtggacatagataa |
341 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||| ||||| |
|
|
| T |
12741966 |
gagaagagaacttaaaaatgaaggagaaagaggtggacatcgataa |
12741921 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 34 - 341
Target Start/End: Original strand, 18354893 - 18355201
Alignment:
| Q |
34 |
atatatgtatagcatcatcttcaacacacctggctgatacgatgccgcagacgacaacggcggaggggatgttgtaatcgagagcattggtgaagggcga |
133 |
Q |
| |
|
|||||| ||||| | ||||||||||||||||| ||||||||| ||||||||| ||||| ||| ||| ||||| | ||||||||||||||||||||||||| |
|
|
| T |
18354893 |
atatatatatagtagcatcttcaacacacctgactgatacgacgccgcagacaacaacagcgaaggtgatgtcggaatcgagagcattggtgaagggcga |
18354992 |
T |
|
| Q |
134 |
cgataggagagagctgcgacgacggagagagcggcaacgacagcgaattttgtatgaatgtctgagagtgaggtggaagataaacaactcaaagggcgaa |
233 |
Q |
| |
|
||| |||||||||||||| |||||||||||||||||||| ||| ||||||||| |||||||||||||||||| |||||||| |||||||||||||||||| |
|
|
| T |
18354993 |
cgacaggagagagctgcggcgacggagagagcggcaacggcagagaattttgtttgaatgtctgagagtgagatggaagatgaacaactcaaagggcgaa |
18355092 |
T |
|
| Q |
234 |
gagannnnnnngagaaaaagcaatctgaattccaacacataaagaaggaataatgggagaggagagaagagaactt-aaaatgaaggagaaagaggtgga |
332 |
Q |
| |
|
|||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
18355093 |
gagatttttttgagtaaaagcaatctgaattccaacacataaagaaggaataatgggagaggagagaagagaacttaaaaatgaaggagaaagaggtgga |
18355192 |
T |
|
| Q |
333 |
catagataa |
341 |
Q |
| |
|
||| ||||| |
|
|
| T |
18355193 |
catcgataa |
18355201 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 183 - 341
Target Start/End: Original strand, 10328626 - 10328785
Alignment:
| Q |
183 |
ttgtatgaatgtctgagagtgaggtggaagataaacaactcaaagggcgaagagannnnnnngagaaaaagcaatctgaattccaacacataaagaagga |
282 |
Q |
| |
|
|||| ||||||||||||||||||||||||||| |||||||||||||||||||||| ||| ||||||||||| |||||||||||||||||||||| |
|
|
| T |
10328626 |
ttgtttgaatgtctgagagtgaggtggaagatgaacaactcaaagggcgaagagatttttttgagtaaaagcaatctaaattccaacacataaagaagga |
10328725 |
T |
|
| Q |
283 |
ataatgggagaggagagaagagaactt-aaaatgaaggagaaagaggtggacatagataa |
341 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| |
|
|
| T |
10328726 |
ataatgggagaggagagaagagaacttaaaaatgaaggagaaagaggtggacatcgataa |
10328785 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 220; Significance: 1e-121; HSPs: 4)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 2 - 341
Target Start/End: Original strand, 7473030 - 7473377
Alignment:
| Q |
2 |
caaagttagggaaaagttacagga-----gatttagg--atatatgtatagcatcatcttcaacacacctggctgatacgatgccgcagacgacaacggc |
94 |
Q |
| |
|
|||||||||||||||||||||||| |||||||| |||||| ||||| | |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7473030 |
caaagttagggaaaagttacaggaacaacgatttaggatatatatatatagtagcatcttcaacacacctggctgatacgatgccgcagacgacaacggc |
7473129 |
T |
|
| Q |
95 |
ggaggggatgttgtaatcgagagcattggtgaagggcgacgataggagagagctgcgacgacggagagagcggcaacgacagcgaattttgtatgaatgt |
194 |
Q |
| |
|
| ||| ||||| | |||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| ||||| ||| ||||||||| ||||||| |
|
|
| T |
7473130 |
gaaggtgatgtcggaatcgagagcattggtgaagggcgacgacaggagagagctgcggcgacggagagagcgacaacggcagagaattttgtttgaatgt |
7473229 |
T |
|
| Q |
195 |
ctgagagtgaggtggaagataaacaactcaaagggcgaagagannnnnnngagaaaaagcaatctgaattccaacacataaagaaggaataatgggagag |
294 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||||| ||| ||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
7473230 |
ctgagagtgaggtggaagatgaacaactcaaagggcgaagagatttttttgagtaaaagcaatctaaattccaacacataaagaaggaataatgggagag |
7473329 |
T |
|
| Q |
295 |
gagagaagagaactt-aaaatgaaggagaaagaggtggacatagataa |
341 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||| ||||| |
|
|
| T |
7473330 |
gagagaagagaacttaaaaatgaaggagaaagaggtggacatcgataa |
7473377 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 2 - 341
Target Start/End: Complemental strand, 9044378 - 9044035
Alignment:
| Q |
2 |
caaagttagggaaaagttacagga-----gatttaggatatatgtatagcatcatcttcaacacacctggctgatacgatgccgcagacgacaacggcgg |
96 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||| |||| | |||||||||||||| ||||||||||||||| ||||||||||||| || |
|
|
| T |
9044378 |
caaagttagggaaaagttacaggaacaacgatttaggatatat--atagtagcatcttcaacacacttggctgatacgatgctgcagacgacaacgacga |
9044281 |
T |
|
| Q |
97 |
aggggatgttgtaatcgagagcattggtgaagggcgacgataggagagagctgcgacgacggagagagcggcaacgacagcgaattttgtatgaatgtct |
196 |
Q |
| |
|
||| ||||| | |||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| ||| ||||||||| ||||||||| |
|
|
| T |
9044280 |
aggtgatgtcgaaatcgagagcattggtgaagggcgacgacaggagagagctgcggcgacggagagagcggcaacggcagagaattttgtttgaatgtct |
9044181 |
T |
|
| Q |
197 |
gagagtgaggtggaagataaacaactcaaagggcgaagagannnnnnngagaaaaagcaatctgaattccaacacataaagaaggaataatgggagagga |
296 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||||| | ||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9044180 |
gagagtgaggtggaagatgaacaactcaaagggcgaagaaatttttttgagtaaaagcaatctgaattccaacacataaagaaggaataatgggagagga |
9044081 |
T |
|
| Q |
297 |
gagaagagaactt-aaaatgaaggagaaagaggtggacatagataa |
341 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||| ||||| |
|
|
| T |
9044080 |
gagaagagaacttaaaaatgaaggagaaagaggtggacatcgataa |
9044035 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 2 - 341
Target Start/End: Original strand, 30442091 - 30442435
Alignment:
| Q |
2 |
caaagttagggaaaagttacagga-----gatttaggatatatgtatagcatcatcttcaacacacctggctgatacgatgccgcagacgacaacggcgg |
96 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||| |||| | ||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
30442091 |
caaagttagggaaaagttacaggaacaacgatttaggatatat--atagtagcatcttcaacacatatggctgatacgatgccgcagacgacaacggcca |
30442188 |
T |
|
| Q |
97 |
aggggatgttgtaatcgagagcattggtgaagggcgacgataggagagagctgcgacgacggagagagcggcaacgacagcgaattttgtatgaatgtct |
196 |
Q |
| |
|
||| ||||| | |||||||||||||||||||||||||||| |||||||||||||| | |||||||||||||||||||||| ||||||||| ||||||||| |
|
|
| T |
30442189 |
aggtgatgtcggaatcgagagcattggtgaagggcgacgacaggagagagctgcggcaacggagagagcggcaacgacagagaattttgtttgaatgtct |
30442288 |
T |
|
| Q |
197 |
gagagtgaggtggaagataaacaactcaaagggcgaagaga-nnnnnnngagaaaaagcaatctgaattccaacacataaagaaggaataatgggagagg |
295 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| ||| || |
|
|
| T |
30442289 |
gagagtgaggtggaagatgaacaactcaaagggcgaagagattttttttgagtaaaagcaatctgaattccaacacataaagaaggaataatgagagtgg |
30442388 |
T |
|
| Q |
296 |
agagaagagaac-ttaaaatgaaggagaaagaggtggacatagataa |
341 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||| ||||| |
|
|
| T |
30442389 |
agagaagagaactttaaaatgaaggagaaagaggtggacatcgataa |
30442435 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 306
Target Start/End: Original strand, 22009359 - 22009392
Alignment:
| Q |
273 |
taaagaaggaataatgggagaggagagaagagaa |
306 |
Q |
| |
|
||||||||||||||||||||||||||||| |||| |
|
|
| T |
22009359 |
taaagaaggaataatgggagaggagagaacagaa |
22009392 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 218; Significance: 1e-120; HSPs: 4)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 2 - 341
Target Start/End: Original strand, 19881656 - 19881999
Alignment:
| Q |
2 |
caaagttagggaaaagttacagga-----gatttaggatatatgtatagcatcatcttcaacacacctggctgatacgatgccgcagacgacaacggcgg |
96 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||| |||| | ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19881656 |
caaagttagggaaaagttacaggaacaacgatttaggatatat--atagtagcatcttcaacacacctggctgatacgatgccgcagacgacaacggcga |
19881753 |
T |
|
| Q |
97 |
aggggatgttgtaatcgagagcattggtgaagggcgacgataggagagagctgcgacgacggagagagcggcaacgacagcgaattttgtatgaatgtct |
196 |
Q |
| |
|
||| ||||| | |||||||||||||||||||||| || || |||||||||||||| ||||||||||||||||||||||| ||||||||| ||||||||| |
|
|
| T |
19881754 |
aggtgatgtcggaatcgagagcattggtgaagggtgaggacaggagagagctgcggtgacggagagagcggcaacgacagagaattttgtttgaatgtct |
19881853 |
T |
|
| Q |
197 |
gagagtgaggtggaagataaacaactcaaagggcgaagagannnnnnngagaaaaagcaatctgaattccaacacataaagaaggaataatgggagagga |
296 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19881854 |
gagagtgaggtggaagatgaacaactcaaagggcgaagagatttttttgagtaaaagcaatctgaattccaacacataaagaaggaataatgggagagga |
19881953 |
T |
|
| Q |
297 |
gagaagagaactt-aaaatgaaggagaaagaggtggacatagataa |
341 |
Q |
| |
|
||||||| ||||| |||||||||||||||||||||||||| ||||| |
|
|
| T |
19881954 |
gagaagataacttaaaaatgaaggagaaagaggtggacatcgataa |
19881999 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 49 - 341
Target Start/End: Complemental strand, 37982878 - 37982585
Alignment:
| Q |
49 |
catcttcaacacacctggctgatacgatgccgcagacgacaacggcggaggggatgttgtaatcgagagcattggtgaagggcgacgataggagagagct |
148 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| || ||| ||||| | |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37982878 |
catcttcaacacacctggctgatacgatgccgcagacgacaacgacgaaggtgatgtcggaatcgagagcattggtgaagggcgacgataggagagagct |
37982779 |
T |
|
| Q |
149 |
gcgacgacggagagagcggcaacgacagcgaattttgtatgaatgtctgagagtgaggtggaagataaacaactcaaagggcgaagagannnnnnngaga |
248 |
Q |
| |
|
||| |||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||| ||||||||| |||||||||||| ||| |
|
|
| T |
37982778 |
gcggcgacggagagagcggcaacgacagagaattttgtttgaatgtctgagagtgaggtggaagatgaacaactcagagggcgaagagatttttttgagt |
37982679 |
T |
|
| Q |
249 |
aaaagcaatctgaattccaacacataaagaaggaataatgggagaggagagaagagaactt-aaaatgaaggagaaagaggtggacatagataa |
341 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| |
|
|
| T |
37982678 |
aaaagcaatctgaattccaaaacataaagaaggaataatgggagaggagagaagagaacttaaaaatgaaggagaaagaggtggacatcgataa |
37982585 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 2 - 341
Target Start/End: Original strand, 53972831 - 53973174
Alignment:
| Q |
2 |
caaagttagggaaaagttacagga-----gatttaggatatatgtatagcatcatcttcaacacacctggctgatacgatgccgcagacgacaacggcgg |
96 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||| |||| | |||||||||||||| ||||||||||||||||||||||||||||| || |
|
|
| T |
53972831 |
caaagttagggaaaagttacaggaacaacgatttaggatatat--atagtagcatcttcaacacacttggctgatacgatgccgcagacgacaacgacga |
53972928 |
T |
|
| Q |
97 |
aggggatgttgtaatcgagagcattggtgaagggcgacgataggagagagctgcgacgacggagagagcggcaacgacagcgaattttgtatgaatgtct |
196 |
Q |
| |
|
| | ||||| | |||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| ||||||||| | ||||||| |
|
|
| T |
53972929 |
aagtgatgtcggaatcgagagcattggtgaagggcgacgacaggagagagctgcggcgacggagagagcggcaacgacagagaattttgtttaaatgtct |
53973028 |
T |
|
| Q |
197 |
gagagtgaggtggaagataaacaactcaaagggcgaagagannnnnnngagaaaaagcaatctgaattccaacacataaagaaggaataatgggagagga |
296 |
Q |
| |
|
|||||||||||||||||| |||||||||||||| ||||||| ||| ||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
53973029 |
gagagtgaggtggaagatgaacaactcaaagggagaagagatttttttgagtaaaagcaatctgaattccaacacataaagaatgaataatgggagagga |
53973128 |
T |
|
| Q |
297 |
gagaagagaactt-aaaatgaaggagaaagaggtggacatagataa |
341 |
Q |
| |
|
||||||| ||||| |||||||||||||||||||||||||| ||||| |
|
|
| T |
53973129 |
gagaagaaaacttaaaaatgaaggagaaagaggtggacatcgataa |
53973174 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 63 - 341
Target Start/End: Complemental strand, 31685575 - 31685310
Alignment:
| Q |
63 |
ctggctgatacgatgccgcagacgacaacggcggaggggatgttgtaatcgagagcattggtgaagggcgacgataggagagagctgcgacgacggagag |
162 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||| ||||| | |||||| | ||||||||||||||||||| |||||||||||||| |
|
|
| T |
31685575 |
ctggctgatacgatgccgcagacgacaacggcgaaggtgatgtcggaatcgatatcattggtgaagggcgacgacaggagagagctgcg----------- |
31685487 |
T |
|
| Q |
163 |
agcggcaacgacagcgaattttgtatgaatgtctgagagtgaggtggaagataaacaactcaaagggcgaagagannnnnnn-gagaaaaagcaatctga |
261 |
Q |
| |
|
|||||| || |||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| ||| ||||||||| ||| |
|
|
| T |
31685486 |
----gcaacggcatataattttgtttgaatgtctgagagtgaggtggaagatgaacaactcaaagggcgaagagattttttttgagtaaaagcaatttga |
31685391 |
T |
|
| Q |
262 |
attccaacacataaagaaggaataatgggagaggagagaagagaactt-aaaatgaaggagaaagaggtggacatagataa |
341 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||| ||||| |
|
|
| T |
31685390 |
attccaacacataaagaaggaataatggaagaggagagaaaagaacttaaaaatgaaggagaaagaggtggacatcgataa |
31685310 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0596 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: scaffold0596
Description:
Target: scaffold0596; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 2 - 341
Target Start/End: Complemental strand, 1230 - 887
Alignment:
| Q |
2 |
caaagttagggaaaagttacagga-----gatttaggatatatgtatagcatcatcttcaacacacctggctgatacgatgccgcagacgacaacggcgg |
96 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||| |||| | ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1230 |
caaagttagggaaaagttacaggaacaacgatttaggatatat--atagtagcatcttcaacacacctggctgatacgatgccgcagacgacaacggcga |
1133 |
T |
|
| Q |
97 |
aggggatgttgtaatcgagagcattggtgaagggcgacgataggagagagctgcgacgacggagagagcggcaacgacagcgaattttgtatgaatgtct |
196 |
Q |
| |
|
| | ||||| | |||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| ||| ||||||||| | ||||||| |
|
|
| T |
1132 |
aagtgatgtcggaatcgagagcattggtgaagggcgacgacaggagagagctgcggcgacggagagagcggcaacggcagagaattttgtttaaatgtct |
1033 |
T |
|
| Q |
197 |
gagagtgaggtggaagataaacaactcaaagggcgaagagannnnnnngagaaaaagcaatctgaattccaacacataaagaaggaataatgggagagga |
296 |
Q |
| |
|
|||||||||||||||||| |||||||||||||| ||||||| ||| ||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1032 |
gagagtgaggtggaagatgaacaactcaaagggagaagagatttttttgagtaaaagcaatttgaattccaacacataaagaaggaataatgggagagga |
933 |
T |
|
| Q |
297 |
gagaagagaactt-aaaatgaaggagaaagaggtggacatagataa |
341 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||| ||||| |
|
|
| T |
932 |
gagaagagaacttaaaaatgaaggagaaagaggtggacatcgataa |
887 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 182; Significance: 2e-98; HSPs: 4)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 62 - 335
Target Start/End: Original strand, 14677630 - 14677904
Alignment:
| Q |
62 |
cctggctgatacgatgccgcagacgacaacggcggaggggatgttgtaatcgagagcattggtgaagggcgacgataggagagagctgcgacgacggaga |
161 |
Q |
| |
|
||||||||||||||||| |||||||||||||||| ||| ||||| | |||||||||||||||||||||| |||||||||||||||||||| ||||||||| |
|
|
| T |
14677630 |
cctggctgatacgatgctgcagacgacaacggcgaaggtgatgtcggaatcgagagcattggtgaagggtgacgataggagagagctgcggcgacggaga |
14677729 |
T |
|
| Q |
162 |
gagcggcaacgacagcgaattttgtatgaatgtctgagagtgaggtggaagataaacaactcaaagggcgaagagannnnnnngagaaaaagcaatctga |
261 |
Q |
| |
|
||||||||||| ||| | ||||||| ||||||||||||||||||||||||||| |||||||||||||| |||||| ||| ||||||||||||| |
|
|
| T |
14677730 |
gagcggcaacggcagaggattttgtttgaatgtctgagagtgaggtggaagatgaacaactcaaaggggaaagagatttttttgagtaaaagcaatctga |
14677829 |
T |
|
| Q |
262 |
attccaacacataaagaaggaataatgggagaggagagaagagaactt-aaaatgaaggagaaagaggtggacat |
335 |
Q |
| |
|
||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
14677830 |
atttcaacacataaagaaggaataatgggagaggagagaagagaacttaaaaatgaaggagaaagaggtggacat |
14677904 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 176; E-Value: 9e-95
Query Start/End: Original strand, 62 - 341
Target Start/End: Original strand, 31100480 - 31100760
Alignment:
| Q |
62 |
cctggctgatacgatgccgcagacgacaacggcggaggggatgttgtaatcgagagcattggtgaagggcgacgataggagagagctgcgacgacggaga |
161 |
Q |
| |
|
||||| |||||||||||| ||||||||||||||| ||| ||||||| |||||||||||||||||||||||||||| ||||||||| |||| ||||||||| |
|
|
| T |
31100480 |
cctggatgatacgatgccacagacgacaacggcgaaggtgatgttggaatcgagagcattggtgaagggcgacgacaggagagagttgcggcgacggaga |
31100579 |
T |
|
| Q |
162 |
gagcggcaacgacagcgaattttgtatgaatgtctgagagtgaggtggaagataaacaactcaaagggcgaagagannnnnnngagaaaaagcaatctga |
261 |
Q |
| |
|
||| ||| ||| || ||||||||| ||||||||||||||||||||||||||| |||||||||||||| ||||||| ||| ||||||||||||| |
|
|
| T |
31100580 |
gagtggcgacggcaaagaattttgtttgaatgtctgagagtgaggtggaagatgaacaactcaaagggggaagagatttttttgagtaaaagcaatctga |
31100679 |
T |
|
| Q |
262 |
attccaacacataaagaaggaataatgggagaggagagaagagaactt-aaaatgaaggagaaagaggtggacatagataa |
341 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| ||||| |
|
|
| T |
31100680 |
attccaacacataaagaaggaataatgggagaggagagaagagaacttaaaaatgaaggagaaagaggtgggcatcgataa |
31100760 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 63 - 341
Target Start/End: Complemental strand, 5658268 - 5658004
Alignment:
| Q |
63 |
ctggctgatacgatgccgcagacgacaacggcggaggggatgttgtaatcgagagcattggtgaagggcgacgataggagagagctgcgacgacggagag |
162 |
Q |
| |
|
|||| |||||||||||| ||||||||||||||| ||| ||||||| |||| ||||||||||||||||||||||| |||||||||||||| |||||| |
|
|
| T |
5658268 |
ctggatgatacgatgccacagacgacaacggcgaaggtgatgttggaatcaagagcattggtgaagggcgacgacaggagagagctgcggcgacgg---- |
5658173 |
T |
|
| Q |
163 |
agcggcaacgacagcgaattttgtatgaatgtctgagagtgaggtggaagataaacaactcaaagggcgaagagannnnnnngagaaaaagcaatctgaa |
262 |
Q |
| |
|
|| ||||||||| ||||||||||||||||||||||||||| |||||||||||||| ||||||| ||| |||||||||||||| |
|
|
| T |
5658172 |
-----------caaagaattttgtttgaatgtctgagagtgaggtggaagatgaacaactcaaagggggaagagatttttttgagtaaaagcaatctgaa |
5658084 |
T |
|
| Q |
263 |
ttccaacacataaagaaggaataatgggagaggagagaagagaactt-aaaatgaaggagaaagaggtggacatagataa |
341 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| ||||| |
|
|
| T |
5658083 |
ttccaacacataaagaaggaataatgggagaggagagaagagaacttaaaaatgaaggagaaagaggtgggcatcgataa |
5658004 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 140 - 331
Target Start/End: Original strand, 33688984 - 33689177
Alignment:
| Q |
140 |
gagagagctgcgacgacggagagagcggcaacgacagcgaatt-ttgtatgaatgtctgagagtgaggtggaagataaacaactcaaagggcgaagagan |
238 |
Q |
| |
|
|||||||||||| |||||||||||||||| | | || ||| | |||| ||||||||| ||||||||||||||||| |||||||||||||| ||||||| |
|
|
| T |
33688984 |
gagagagctgcggcgacggagagagcggcgatgggagagaagtcttgtttgaatgtctaagagtgaggtggaagatgaacaactcaaaggg-gaagagat |
33689082 |
T |
|
| Q |
239 |
nnnnnngagaaaaagcaatctgaattccaacacataaagaaggaataatgggagaggagagaagagaac-ttaa-aatgaaggagaaagaggtgg |
331 |
Q |
| |
|
||| |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| |
|
|
| T |
33689083 |
ttttttgagtaaaagcaatctgaattccaaaaagtaaagaaggaataatgggagaggagagaagagaacgttaacaatgaaggagaaagaggtgg |
33689177 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 168; Significance: 6e-90; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 168; E-Value: 6e-90
Query Start/End: Original strand, 62 - 341
Target Start/End: Original strand, 29862969 - 29863249
Alignment:
| Q |
62 |
cctggctgatacgatgccgcagacgacaacggcggaggggatgttgtaatcgagagcattggtgaagggcgacgataggagagagctgcgacgacggaga |
161 |
Q |
| |
|
||||||||||||||||||||||| ||||||||| | | ||||| | |||||||||||| ||||||||||||||| |||||||||||||| ||||||||| |
|
|
| T |
29862969 |
cctggctgatacgatgccgcagatgacaacggcaaaagtgatgtcggaatcgagagcatcggtgaagggcgacgacaggagagagctgcggcgacggaga |
29863068 |
T |
|
| Q |
162 |
gagcggcaacgacagcgaattttgtatgaatgtctgagagtgaggtggaagataaacaactcaaagggcgaagagannnnnnngagaaaaagcaatctga |
261 |
Q |
| |
|
|||||||| |||||| ||||||||| ||||||||||||||||||||||||||| |||||||||||||| |||||| ||| ||||||||||||| |
|
|
| T |
29863069 |
gagcggcagcgacagagaattttgtttgaatgtctgagagtgaggtggaagatgaacaactcaaaggggaaagagatttttttgagtaaaagcaatctga |
29863168 |
T |
|
| Q |
262 |
attccaacacataaagaaggaataatgggagaggagagaagagaact-taaaatgaaggagaaagaggtggacatagataa |
341 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| ||||| |
|
|
| T |
29863169 |
attctaacacataaagaaggaataatgggagaggagataagagaactaaaaaatgaaggagaaagaggtggacatcgataa |
29863249 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0045 (Bit Score: 158; Significance: 5e-84; HSPs: 1)
Name: scaffold0045
Description:
Target: scaffold0045; HSP #1
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 62 - 331
Target Start/End: Original strand, 11242 - 11512
Alignment:
| Q |
62 |
cctggctgatacgatgccgcagacgacaacggcggaggggatgttgtaatcgagagcattggtgaagggcgacgataggagagagctgcgacgacggaga |
161 |
Q |
| |
|
|||||||||| | ||||||||||||||||||||| ||| ||||| | | |||||||||||||||||||||||||| | |||||||||||| ||||||||| |
|
|
| T |
11242 |
cctggctgatgcaatgccgcagacgacaacggcgaaggtgatgtcggattcgagagcattggtgaagggcgacgacaagagagagctgcggcgacggaga |
11341 |
T |
|
| Q |
162 |
gagcggcaacgacagcgaattttgtatgaatgtctgagagtgaggtggaagataaacaactcaaagggcgaagagannnnnnngagaaaaagcaatctga |
261 |
Q |
| |
|
|||||| || ||| ||||||||| |||||||||| |||||||||||||||| |||||||||||||| |||| || ||| ||||||||||||| |
|
|
| T |
11342 |
gagcggtgacaacaaagaattttgtttgaatgtctgggagtgaggtggaagatgaacaactcaaagggggaagggatttgtttgagtaaaagcaatctga |
11441 |
T |
|
| Q |
262 |
attccaacacataaagaaggaataatgggagaggagagaagagaactt-aaaatgaaggagaaagaggtgg |
331 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
11442 |
attccaacacataaagaaggaataatgggagaggagagaagagaacttaaaaatgaaggagaaagaggtgg |
11512 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0035 (Bit Score: 145; Significance: 3e-76; HSPs: 1)
Name: scaffold0035
Description:
Target: scaffold0035; HSP #1
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 62 - 341
Target Start/End: Complemental strand, 35574 - 35296
Alignment:
| Q |
62 |
cctggctgatacgatgccgcagacgacaacggcggaggggatgttgtaatcgagagcattggtgaagggcgacgataggagagagctgcgacgacggaga |
161 |
Q |
| |
|
||||||||||||||||||||| |||||||||||| ||| ||||| |||||||||||| ||| || |||||||| |||||||||||||| ||||||||| |
|
|
| T |
35574 |
cctggctgatacgatgccgcaaacgacaacggcgaaggtgatgtcagaatcgagagcatcggtcaaaggcgacgacaggagagagctgcggcgacggaga |
35475 |
T |
|
| Q |
162 |
gagcggcaacgacagcgaattttgtatgaatgtctgagagtgaggtggaagataaacaactcaaagggcgaagagannnnnnngagaaaaagcaatctga |
261 |
Q |
| |
|
|||| |||||| ||| ||||||||| ||||||||||||||||||||||||||| |||||||||||||| || || ||| ||||||||||||| |
|
|
| T |
35474 |
gagcagcaacggcagagaattttgtttgaatgtctgagagtgaggtggaagatgaacaactcaaaggggaaaacgatttttttgagtaaaagcaatctga |
35375 |
T |
|
| Q |
262 |
attccaacacataaagaaggaataatgggagaggagagaagagaactt-aaaatgaaggagaaagaggtggacatagataa |
341 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||| |||||||| ||||||||||||||| |||||||||| ||||| |
|
|
| T |
35374 |
attccaactcataaagaaggaataatgggagaggagag--gagaacttaaaaatgaaggagaaaaaggtggacatcgataa |
35296 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 138; Significance: 4e-72; HSPs: 3)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 62 - 341
Target Start/End: Original strand, 33045054 - 33045319
Alignment:
| Q |
62 |
cctggctgatacgatgccgcagacgacaacggcggaggggatgttgtaatcgagagcattggtgaagggcgacgataggagagagctgcgacgacggaga |
161 |
Q |
| |
|
||||| ||||||||||||||||||||||||| || ||| ||||||| |||||||||||||||||||||||||||| |||||||||||||| ||||| |
|
|
| T |
33045054 |
cctggatgatacgatgccgcagacgacaacgacgaaggtgatgttggaatcgagagcattggtgaagggcgacgacaggagagagctgcggcgacg---- |
33045149 |
T |
|
| Q |
162 |
gagcggcaacgacagcgaattttgtatgaatgtctgagagtgaggtggaagataaacaactcaaagggcgaagagannnnnnngagaaaaagcaatctga |
261 |
Q |
| |
|
||| ||||||||| |||||||||||||||||||| |||||| |||||||||||||| ||||||| ||| ||||||||||||| |
|
|
| T |
33045150 |
-----------acaaagaattttgtttgaatgtctgagagtgaggttgaagatgaacaactcaaagggggaagagatttttttgagtaaaagcaatctga |
33045238 |
T |
|
| Q |
262 |
attccaacacataaagaaggaataatgggagaggagagaagagaactt-aaaatgaaggagaaagaggtggacatagataa |
341 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||| ||||| |
|
|
| T |
33045239 |
attccaacacataaagaaggaataatgggagaggagacaagagaacttaaaaatgaaggagaaagaggtggacatcgataa |
33045319 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 62 - 341
Target Start/End: Complemental strand, 10092985 - 10092731
Alignment:
| Q |
62 |
cctggctgatacgatgccgcagacgacaacggcggaggggatgttgtaatcgagagcattggtgaagggcgacgataggagagagctgcgacgacggaga |
161 |
Q |
| |
|
||||||||||||||||||||||||||||||| || ||| ||||| | |||||||||||||||||||||||||||| || ||| |
|
|
| T |
10092985 |
cctggctgatacgatgccgcagacgacaacgacgaaggtgatgtcggaatcgagagcattggtgaagggcgacgacag-------------------aga |
10092905 |
T |
|
| Q |
162 |
gagcggcaacgacagcgaattttgtatgaatgtctgagagtgaggtggaagataaacaactcaaagggcgaagagannnnnnngagaaaaagcaatctga |
261 |
Q |
| |
|
||||||| ||| || ||||||||| ||||||||||||||||||||||||||| ||||||| |||||| |||||| ||| ||||||||| ||| |
|
|
| T |
10092904 |
gagcggcgacgttagagaattttgtttgaatgtctgagagtgaggtggaagatgaacaacttaaaggg--aagagatttttttgagtaaaagcaatttga |
10092807 |
T |
|
| Q |
262 |
attccaacacataaagaaggaataatgggagaggagagaagagaactt-aaaatgaaggagaaagaggtggacatagataa |
341 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| ||||| |
|
|
| T |
10092806 |
attccaacacataaagaaggaataatgggagaggag-----agaacttaaaaatgaaggagaaagaggtggacatcgataa |
10092731 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 129 - 237
Target Start/End: Original strand, 22000988 - 22001096
Alignment:
| Q |
129 |
ggcgacgataggagagagctgcgacgacggagagagcggcaacgacagcgaattttgtatgaatgtctgagagtgaggtggaagataaacaactcaaagg |
228 |
Q |
| |
|
|||||||| |||||||||||||| |||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||||| ||||||||||||| |
|
|
| T |
22000988 |
ggcgacgacaggagagagctgcggcgacggagagagcggcaacgacagagaattttgtttgaatgtctgaaagtgaggtggaagatgaacaactcaaagg |
22001087 |
T |
|
| Q |
229 |
gcgaagaga |
237 |
Q |
| |
|
| ||||||| |
|
|
| T |
22001088 |
gggaagaga |
22001096 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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