View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5139_1D_low_37 (Length: 210)
Name: NF5139_1D_low_37
Description: NF5139_1D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5139_1D_low_37 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 200; Significance: 1e-109; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 11 - 210
Target Start/End: Original strand, 44122987 - 44123186
Alignment:
| Q |
11 |
gtgttccaactgaggtaagttttgacattggcaattaaattccgtttccttgaggttggaattgatttgtgcctttctaggttgttaagcaaaggataca |
110 |
Q |
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| T |
44122987 |
gtgttccaactgaggtaagttttgacattggcaattaaattccgtttccttgaggttggaattgatttgtgcctttctaggttgttaagcaaaggataca |
44123086 |
T |
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| Q |
111 |
aattggtcaattcaaatcagcccctgatgctgtccgtcttatcattgctaatgagggttttaaaggtctttatgcggtatgtgttagtttcatgtcgtga |
210 |
Q |
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| T |
44123087 |
aattggtcaattcaaatcagcccctgatgctgtccgtcttatcattgctaatgagggttttaaaggtctttatgcggtatgtgttagtttcatgtcgtga |
44123186 |
T |
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