View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5140_high_3 (Length: 242)
Name: NF5140_high_3
Description: NF5140
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5140_high_3 |
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Alignment Details
Target: chr4 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 9 - 225
Target Start/End: Original strand, 35444785 - 35445001
Alignment:
| Q |
9 |
gagatgaacttaattgccgaatgacagtcttcacatatcctaaggttcttgacaatcttgagcgccgttccatcaccagttttcatcagcccaaatgcta |
108 |
Q |
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| T |
35444785 |
gagatgaacttaattgccgaatgacagtcttcacatatcctaaggttcttgacaatcttgagcgccgttccatgactagttttcatcagcccaaatgcta |
35444884 |
T |
|
| Q |
109 |
ctgcaagcttctcactatggtgtctgagggcatactccctctcttcttcttccaactcgtgcattgctgattcaggaattggtgcataacccgcttcctt |
208 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35444885 |
ctgcaagcttctcactatggtgtctgagggcatactccctctcttcttcttccaactcgtgcattgctgattcaggaattggtgcataacccgcttcctt |
35444984 |
T |
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| Q |
209 |
gcacctccatatcaacc |
225 |
Q |
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||||||||||||||||| |
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| T |
35444985 |
gcacctccatatcaacc |
35445001 |
T |
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