View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5141_low_6 (Length: 295)
Name: NF5141_low_6
Description: NF5141
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5141_low_6 |
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Alignment Details
Target: chr6 (Bit Score: 238; Significance: 1e-132; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 16 - 278
Target Start/End: Original strand, 6910196 - 6910458
Alignment:
| Q |
16 |
ataagctcaaaattttatctcaccaccaaacatagcctnnnnnnngataatgaaaaaggaaccgagtaccttagtaatggaaatttcatcatcaggaaca |
115 |
Q |
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| T |
6910196 |
ataagctcaaaattttatctcaccaccaaacatagcctaaaaaaagataatgaaaaaggaaccgagtaccttagtaatggaaatttcatcatcaggaaca |
6910295 |
T |
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| Q |
116 |
agtgttctactatcaataggaacatcagaagaagactgagaagcagtagtagttgaagaatcagctgctcttactggaacaaaactaaacctattgcttt |
215 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
6910296 |
agtgttctactatcaataggaacatcagaagaagactgagaagcagtagtagttgaagaatcagcagctcttactggaacaaaactaaacctattgcttt |
6910395 |
T |
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| Q |
216 |
tgaagaaaagcttagcatgaaaacatgaaatggattgaggatgaacagaaacaagtggagact |
278 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6910396 |
tgaagaaaagcttagcatgaaaacatgaaatggattgaggatgaacagaaacaagtggagact |
6910458 |
T |
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