View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5142_low_2 (Length: 305)
Name: NF5142_low_2
Description: NF5142
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5142_low_2 |
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Alignment Details
Target: chr4 (Bit Score: 274; Significance: 1e-153; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 14 - 287
Target Start/End: Original strand, 4030744 - 4031017
Alignment:
| Q |
14 |
gaagcaaagggaaatagtatgaatacaattatagtggggtccaggtcaatttaaaagatattgtgaagcttgttgagacacattgcttcatattaaagaa |
113 |
Q |
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| T |
4030744 |
gaagcaaagggaaatagtatgaatacaattatagtggggtccaggtcaatttaaaagatattgtgaagcttgttgagacacattgcttcatattaaagaa |
4030843 |
T |
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| Q |
114 |
agtatagtctataataagatgaaataaaacatgaaacagaaagcatcatttttcagtaagaaactcggatttttgtctgaactgaaaatccaagagtact |
213 |
Q |
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| T |
4030844 |
agtatagtctataataagatgaaataaaacatgaaacagaaagcatcatttttcagtaagaaactcggatttttgtctgaactgaaaatccaagagtact |
4030943 |
T |
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| Q |
214 |
caagaatctttgcaaggaagaaaacaaagattaaaaactcaaactgttgtgactttattaatgcattcattttg |
287 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4030944 |
caagaatctttgcaaggaagaaaacaaagattaaaaactcaaactgttgtgactttattaatgcattcattttg |
4031017 |
T |
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