View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5143_low_4 (Length: 645)

Name: NF5143_low_4
Description: NF5143
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5143_low_4
NF5143_low_4
[»] chr3 (34 HSPs)
chr3 (48-549)||(44882694-44883210)
chr3 (570-630)||(44882586-44882646)
chr3 (1-52)||(2796174-2796225)
chr3 (1-48)||(19741274-19741321)
chr3 (1-52)||(40033838-40033889)
chr3 (1-47)||(34142600-34142646)
chr3 (1-48)||(33689381-33689428)
chr3 (1-47)||(9294340-9294386)
chr3 (1-47)||(40758147-40758193)
chr3 (1-51)||(42342787-42342837)
chr3 (1-51)||(51993960-51994010)
chr3 (1-46)||(51994268-51994313)
chr3 (1-49)||(23458361-23458409)
chr3 (1-49)||(33689761-33689809)
chr3 (1-49)||(40758492-40758540)
chr3 (1-44)||(36150530-36150573)
chr3 (1-47)||(3850509-3850555)
chr3 (1-47)||(36418070-36418116)
chr3 (1-50)||(9292240-9292289)
chr3 (2-50)||(9367738-9367786)
chr3 (1-49)||(19740921-19740969)
chr3 (1-49)||(41558006-41558054)
chr3 (1-44)||(26463635-26463678)
chr3 (1-48)||(26463968-26464015)
chr3 (1-44)||(46474818-46474861)
chr3 (1-44)||(46475162-46475205)
chr3 (1-44)||(53756747-53756790)
chr3 (1-48)||(53856439-53856486)
chr3 (1-43)||(41558264-41558306)
chr3 (375-429)||(44913020-44913074)
chr3 (1-47)||(53856015-53856061)
chr3 (1-46)||(35712045-35712090)
chr3 (1-41)||(9368683-9368723)
chr3 (1-45)||(43384665-43384709)
[»] chr4 (65 HSPs)
chr4 (1-52)||(50418663-50418714)
chr4 (1-51)||(10781866-10781916)
chr4 (1-49)||(7451832-7451880)
chr4 (1-49)||(13058035-13058083)
chr4 (1-49)||(24349672-24349720)
chr4 (1-49)||(24711462-24711510)
chr4 (1-49)||(50419019-50419067)
chr4 (1-48)||(10780712-10780759)
chr4 (1-48)||(10974321-10974368)
chr4 (1-48)||(23613308-23613355)
chr4 (1-48)||(24350814-24350861)
chr4 (1-48)||(24711110-24711157)
chr4 (1-48)||(48528484-48528531)
chr4 (1-52)||(51692901-51692952)
chr4 (1-52)||(55867496-55867547)
chr4 (1-47)||(7452185-7452231)
chr4 (1-47)||(23613660-23613706)
chr4 (1-46)||(49879208-49879253)
chr4 (1-49)||(34765762-34765810)
chr4 (1-45)||(44967071-44967115)
chr4 (1-49)||(44967420-44967468)
chr4 (1-48)||(5368946-5368993)
chr4 (1-48)||(13058364-13058411)
chr4 (1-48)||(18831348-18831395)
chr4 (1-44)||(37248587-37248630)
chr4 (1-48)||(46661296-46661343)
chr4 (1-47)||(18831699-18831745)
chr4 (1-51)||(51692549-51692599)
chr4 (1-50)||(34765377-34765426)
chr4 (1-50)||(43155878-43155927)
chr4 (1-49)||(148137-148185)
chr4 (1-45)||(15508054-15508098)
chr4 (1-45)||(16006175-16006219)
chr4 (1-49)||(24411730-24411778)
chr4 (1-49)||(35027996-35028044)
chr4 (1-49)||(35508622-35508670)
chr4 (1-49)||(36008842-36008890)
chr4 (1-45)||(37248238-37248282)
chr4 (1-49)||(39539300-39539348)
chr4 (1-48)||(1179182-1179229)
chr4 (1-48)||(14801735-14801782)
chr4 (1-48)||(17355924-17355971)
chr4 (1-44)||(43155532-43155575)
chr4 (1-48)||(53129888-53129935)
chr4 (1-44)||(54086698-54086741)
chr4 (1-46)||(15507674-15507719)
chr4 (1-49)||(36009195-36009244)
chr4 (2-39)||(49879559-49879596)
chr4 (1-49)||(37976535-37976583)
chr4 (1-45)||(53701814-53701858)
chr4 (1-48)||(1178056-1178103)
chr4 (1-44)||(11108222-11108265)
chr4 (1-48)||(35028380-35028427)
chr4 (1-47)||(147319-147365)
chr4 (1-47)||(5369249-5369295)
chr4 (2-44)||(37976156-37976198)
chr4 (2-48)||(53129505-53129551)
chr4 (1-47)||(55866111-55866157)
chr4 (1-42)||(16005843-16005884)
chr4 (1-50)||(24411355-24411404)
chr4 (1-46)||(52909254-52909299)
chr4 (1-50)||(52909635-52909684)
chr4 (1-45)||(17356304-17356348)
chr4 (1-45)||(54087077-54087121)
chr4 (1-49)||(54435479-54435527)
[»] chr8 (46 HSPs)
chr8 (1-51)||(12198946-12198996)
chr8 (1-51)||(12443374-12443424)
chr8 (1-49)||(23663543-23663591)
chr8 (1-49)||(23663896-23663944)
chr8 (1-48)||(8316652-8316699)
chr8 (1-48)||(8316970-8317017)
chr8 (1-48)||(20386812-20386859)
chr8 (1-47)||(20385568-20385614)
chr8 (1-47)||(38956054-38956100)
chr8 (1-58)||(23698626-23698683)
chr8 (1-49)||(1425051-1425099)
chr8 (1-49)||(12273235-12273283)
chr8 (1-49)||(16388581-16388629)
chr8 (1-49)||(33357496-33357544)
chr8 (1-47)||(39071676-39071722)
chr8 (1-49)||(7313387-7313435)
chr8 (1-45)||(12272920-12272964)
chr8 (1-49)||(13186441-13186489)
chr8 (1-45)||(40317966-40318010)
chr8 (1-48)||(4995038-4995085)
chr8 (1-48)||(7306398-7306445)
chr8 (1-48)||(13186059-13186106)
chr8 (1-48)||(22915740-22915787)
chr8 (1-47)||(23698308-23698355)
chr8 (1-44)||(38862945-38862988)
chr8 (1-48)||(40318346-40318393)
chr8 (1-47)||(16388908-16388954)
chr8 (1-47)||(34685639-34685685)
chr8 (3-49)||(36186448-36186494)
chr8 (1-47)||(38955703-38955749)
chr8 (1-46)||(30712098-30712143)
chr8 (1-46)||(30719875-30719920)
chr8 (1-49)||(39072023-39072071)
chr8 (1-47)||(4406042-4406088)
chr8 (1-47)||(30459371-30459417)
chr8 (1-47)||(31608895-31608941)
chr8 (1-47)||(42803600-42803646)
chr8 (1-46)||(1425403-1425448)
chr8 (1-49)||(4994655-4994703)
chr8 (1-49)||(7295309-7295357)
chr8 (1-45)||(9065667-9065711)
chr8 (1-45)||(12199288-12199332)
chr8 (1-45)||(12443716-12443760)
chr8 (1-49)||(34060487-34060535)
chr8 (1-45)||(34177352-34177396)
chr8 (3-47)||(38862618-38862662)
[»] chr6 (26 HSPs)
chr6 (1-50)||(681110-681159)
chr6 (1-54)||(30337442-30337495)
chr6 (1-48)||(17734195-17734242)
chr6 (1-51)||(13379864-13379914)
chr6 (1-50)||(30726141-30726190)
chr6 (1-49)||(26463177-26463225)
chr6 (1-49)||(33647333-33647381)
chr6 (1-48)||(679865-679912)
chr6 (1-48)||(3059638-3059685)
chr6 (1-48)||(33517916-33517963)
chr6 (1-47)||(30337800-30337846)
chr6 (1-49)||(8090309-8090357)
chr6 (1-49)||(12081018-12081066)
chr6 (1-49)||(20651008-20651056)
chr6 (1-49)||(30804243-30804291)
chr6 (1-52)||(17734545-17734596)
chr6 (1-48)||(21628095-21628142)
chr6 (1-50)||(12080633-12080682)
chr6 (3-51)||(3059253-3059301)
chr6 (1-45)||(11434804-11434848)
chr6 (3-51)||(12408555-12408603)
chr6 (1-44)||(22617886-22617929)
chr6 (1-52)||(30803856-30803907)
chr6 (1-47)||(15115339-15115385)
chr6 (1-47)||(15116614-15116660)
chr6 (2-47)||(26464582-26464627)
[»] chr5 (62 HSPs)
chr5 (1-50)||(28770866-28770915)
chr5 (1-49)||(38475381-38475429)
chr5 (1-48)||(3528872-3528919)
chr5 (1-48)||(11761748-11761795)
chr5 (1-48)||(11762099-11762146)
chr5 (1-48)||(24547507-24547554)
chr5 (1-52)||(27587497-27587548)
chr5 (1-47)||(3529224-3529270)
chr5 (1-47)||(27587148-27587194)
chr5 (1-50)||(20814517-20814566)
chr5 (1-49)||(5993887-5993935)
chr5 (1-49)||(6150802-6150850)
chr5 (1-49)||(14194421-14194469)
chr5 (1-49)||(20840531-20840579)
chr5 (1-48)||(6150453-6150500)
chr5 (1-48)||(16157237-16157284)
chr5 (1-47)||(5024019-5024065)
chr5 (1-47)||(17202781-17202827)
chr5 (1-47)||(28771220-28771266)
chr5 (1-51)||(39453296-39453346)
chr5 (1-46)||(18247087-18247132)
chr5 (3-48)||(18247460-18247505)
chr5 (1-50)||(20840819-20840868)
chr5 (1-46)||(38442449-38442494)
chr5 (1-49)||(13962862-13962910)
chr5 (1-45)||(19892310-19892354)
chr5 (1-49)||(24547175-24547223)
chr5 (1-49)||(28269420-28269468)
chr5 (1-49)||(32242240-32242288)
chr5 (1-45)||(35512496-35512540)
chr5 (1-44)||(5024400-5024443)
chr5 (1-44)||(11740690-11740733)
chr5 (1-48)||(18670201-18670248)
chr5 (1-52)||(29646357-29646408)
chr5 (1-48)||(32242623-32242670)
chr5 (1-48)||(39453681-39453728)
chr5 (1-48)||(42265734-42265781)
chr5 (1-44)||(43159196-43159239)
chr5 (1-47)||(186801-186847)
chr5 (1-42)||(8322786-8322827)
chr5 (1-46)||(16156856-16156901)
chr5 (1-46)||(19517989-19518034)
chr5 (1-50)||(28269762-28269810)
chr5 (1-45)||(19892690-19892734)
chr5 (1-49)||(20814134-20814182)
chr5 (1-49)||(35512146-35512194)
chr5 (1-49)||(37991197-37991245)
chr5 (1-45)||(37992670-37992714)
chr5 (1-44)||(11047818-11047861)
chr5 (1-44)||(13362610-13362653)
chr5 (1-48)||(16083325-16083372)
chr5 (1-48)||(17202398-17202445)
chr5 (1-44)||(21257543-21257586)
chr5 (1-48)||(21265524-21265571)
chr5 (1-44)||(27937381-27937424)
chr5 (1-51)||(13963211-13963261)
chr5 (1-51)||(14194804-14194854)
chr5 (12-50)||(27937052-27937090)
chr5 (1-47)||(35920566-35920612)
chr5 (1-46)||(11741899-11741944)
chr5 (1-48)||(6301925-6301970)
chr5 (1-45)||(16082979-16083023)
[»] chr7 (44 HSPs)
chr7 (1-49)||(17102371-17102419)
chr7 (1-48)||(6253822-6253869)
chr7 (1-48)||(6571012-6571059)
chr7 (1-48)||(17102019-17102066)
chr7 (2-48)||(32298776-32298822)
chr7 (1-46)||(6253472-6253517)
chr7 (1-50)||(28469390-28469439)
chr7 (1-49)||(5457289-5457337)
chr7 (1-49)||(27396977-27397025)
chr7 (1-49)||(45010986-45011034)
chr7 (1-48)||(19204488-19204535)
chr7 (1-48)||(22871659-22871706)
chr7 (1-48)||(24389167-24389214)
chr7 (1-48)||(27991738-27991785)
chr7 (1-44)||(27992090-27992133)
chr7 (1-48)||(28469009-28469056)
chr7 (1-52)||(42731801-42731852)
chr7 (2-47)||(18670246-18670291)
chr7 (1-46)||(32299087-32299132)
chr7 (1-49)||(28105499-28105547)
chr7 (1-49)||(48788801-48788849)
chr7 (1-48)||(2640177-2640224)
chr7 (1-48)||(10936176-10936223)
chr7 (1-48)||(29141558-29141605)
chr7 (1-52)||(37657219-37657270)
chr7 (1-47)||(10935794-10935840)
chr7 (1-47)||(13386129-13386175)
chr7 (1-47)||(40380066-40380112)
chr7 (1-47)||(42362450-42362496)
chr7 (1-47)||(42731419-42731465)
chr7 (1-50)||(17886872-17886921)
chr7 (1-46)||(34799540-34799585)
chr7 (1-42)||(40379774-40379815)
chr7 (1-46)||(42019598-42019643)
chr7 (1-45)||(19204840-19204884)
chr7 (1-49)||(20426712-20426760)
chr7 (1-45)||(24388821-24388865)
chr7 (1-49)||(29144364-29144412)
chr7 (1-48)||(27396628-27396675)
chr7 (1-48)||(32053142-32053189)
chr7 (1-48)||(34793903-34793950)
chr7 (1-44)||(42019979-42020022)
chr7 (4-46)||(23181379-23181421)
chr7 (1-47)||(43123175-43123221)
[»] chr2 (36 HSPs)
chr2 (1-49)||(11163405-11163453)
chr2 (1-48)||(16099406-16099453)
chr2 (1-50)||(39423897-39423946)
chr2 (1-49)||(6657876-6657924)
chr2 (1-49)||(39498661-39498709)
chr2 (1-49)||(44045384-44045432)
chr2 (1-48)||(3555249-3555296)
chr2 (1-48)||(36755470-36755517)
chr2 (1-48)||(45556111-45556158)
chr2 (1-48)||(45556429-45556476)
chr2 (1-47)||(6658229-6658275)
chr2 (1-51)||(25231230-25231280)
chr2 (1-49)||(15848470-15848518)
chr2 (1-48)||(2318892-2318939)
chr2 (1-44)||(6588686-6588729)
chr2 (1-48)||(15848087-15848134)
chr2 (1-48)||(36382509-36382556)
chr2 (1-48)||(37895346-37895393)
chr2 (1-48)||(44044113-44044160)
chr2 (1-47)||(3556391-3556437)
chr2 (1-47)||(9076449-9076495)
chr2 (1-47)||(10713105-10713151)
chr2 (1-47)||(16099055-16099101)
chr2 (1-47)||(25230102-25230148)
chr2 (1-49)||(34448177-34448225)
chr2 (1-49)||(36382159-36382207)
chr2 (1-45)||(36480100-36480144)
chr2 (1-49)||(44714143-44714190)
chr2 (1-52)||(30729616-30729667)
chr2 (1-48)||(34447812-34447859)
chr2 (1-40)||(39498317-39498356)
chr2 (1-47)||(11163054-11163100)
chr2 (2-44)||(37895730-37895772)
chr2 (1-34)||(13692602-13692635)
chr2 (1-45)||(36479719-36479764)
chr2 (1-45)||(10712725-10712769)
[»] scaffold0007 (2 HSPs)
scaffold0007 (1-48)||(2123-2170)
scaffold0007 (1-51)||(1765-1815)
[»] chr1 (62 HSPs)
chr1 (1-48)||(25647883-25647930)
chr1 (1-47)||(26024774-26024820)
chr1 (1-50)||(19515816-19515865)
chr1 (1-50)||(36694279-36694328)
chr1 (1-50)||(36710380-36710429)
chr1 (1-50)||(47999474-47999523)
chr1 (1-49)||(23209709-23209757)
chr1 (1-49)||(30711709-30711757)
chr1 (1-49)||(35473629-35473677)
chr1 (1-49)||(43759204-43759252)
chr1 (1-48)||(17661851-17661898)
chr1 (1-48)||(26024422-26024469)
chr1 (1-52)||(42533019-42533070)
chr1 (1-47)||(183221-183267)
chr1 (1-47)||(6367562-6367608)
chr1 (1-47)||(24009575-24009621)
chr1 (1-47)||(34464449-34464495)
chr1 (1-47)||(34850447-34850493)
chr1 (1-47)||(47999123-47999169)
chr1 (1-50)||(5734007-5734056)
chr1 (1-46)||(35152712-35152757)
chr1 (1-49)||(13914066-13914114)
chr1 (1-49)||(34464831-34464879)
chr1 (1-49)||(35152341-35152389)
chr1 (1-49)||(37578190-37578238)
chr1 (1-49)||(41098731-41098779)
chr1 (1-48)||(6367944-6367991)
chr1 (1-48)||(17662232-17662279)
chr1 (1-44)||(17692567-17692610)
chr1 (1-48)||(19017628-19017675)
chr1 (1-48)||(37578574-37578621)
chr1 (1-44)||(40435348-40435391)
chr1 (1-48)||(40772841-40772888)
chr1 (1-47)||(6518178-6518224)
chr1 (1-47)||(30711327-30711373)
chr1 (1-47)||(34849011-34849057)
chr1 (1-51)||(36694630-36694680)
chr1 (1-51)||(36710731-36710781)
chr1 (1-47)||(40772507-40772553)
chr1 (1-47)||(46899061-46899107)
chr1 (1-49)||(183573-183622)
chr1 (1-46)||(4960541-4960586)
chr1 (1-49)||(19018011-19018059)
chr1 (1-45)||(42248475-42248519)
chr1 (1-49)||(51015631-51015679)
chr1 (1-48)||(7231631-7231678)
chr1 (5-48)||(7820953-7820996)
chr1 (1-48)||(7821335-7821382)
chr1 (1-52)||(19322887-19322938)
chr1 (1-48)||(48779501-48779548)
chr1 (1-40)||(49723108-49723147)
chr1 (1-48)||(51019731-51019778)
chr1 (1-47)||(26234432-26234478)
chr1 (1-47)||(31197065-31197111)
chr1 (1-47)||(32917642-32917688)
chr1 (1-50)||(1841840-1841889)
chr1 (1-46)||(13300286-13300331)
chr1 (1-46)||(13914449-13914494)
chr1 (1-34)||(14878984-14879017)
chr1 (3-44)||(40210373-40210414)
chr1 (1-46)||(48692396-48692441)
chr1 (1-45)||(40210752-40210796)
[»] scaffold0020 (2 HSPs)
scaffold0020 (1-49)||(139670-139718)
scaffold0020 (1-44)||(140023-140066)
[»] scaffold0707 (1 HSPs)
scaffold0707 (1-48)||(6461-6508)
[»] scaffold0075 (2 HSPs)
scaffold0075 (1-47)||(14772-14818)
scaffold0075 (1-49)||(14427-14475)
[»] scaffold0005 (1 HSPs)
scaffold0005 (1-48)||(37945-37992)
[»] scaffold0031 (2 HSPs)
scaffold0031 (1-47)||(68965-69011)
scaffold0031 (1-47)||(69347-69393)
[»] scaffold0775 (1 HSPs)
scaffold0775 (1-50)||(4959-5008)


Alignment Details
Target: chr3 (Bit Score: 340; Significance: 0; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 340; E-Value: 0
Query Start/End: Original strand, 48 - 549
Target Start/End: Complemental strand, 44883210 - 44882694
Alignment:
Q  48 tatatgatttgaagcttgaaaattcgaccaaaaagacaagttgaaatgnnnnnnnnnngataaaagaccaaattgttacttgaaattaaaagtgcaattt 147  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||          |||||||||| |||||||||||||||||||||||||||||||    
T  44883210 tataagatttgaagcttgaaaattcgaccaaaaagacaagttgaaatgaaaaaaa---gataaaagacaaaattgttacttgaaattaaaagtgcaattt 44883114  T
Q  148 ttgttctaacttttcattaagagtttagataattagataagatgaaataaataaattaaaatatagttttgataccggtgcaacaaacattagcaaaatg 247  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||    
T  44883113 ttgttctaacttttcattaagagtttagataattagataagatgaaataaataaattaaaatatagttttgataccggtgcaacaaacattaagaaaatg 44883014  T
Q  248 aatttgaattgagtaatacctatgcattcggcaaacatagaacgaggaagtaacctgtttgnnnnnnnagtaagcctataaaactccccacaaacctttt 347  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       |||||||||||||||||||||| |||||||||    
T  44883013 aatttgaattgagtaatacctatgcattcggcaaacatagaacgaggaagtaacctatttgtttttttagtaagcctataaaactccccataaacctttt 44882914  T
Q  348 cccatccatcatcacgagcagctttggtgataaagttgagtcctttgagagcattagcagctgcagacgtagtcctatcatactccnnnnnnncagctcc 447  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| |       ||| |||    
T  44882913 cccatccatcatcacgagcagctttggtgataaagttaagtcctttgagagcattagaagctgcagacgtagtcctatcatacttctttttttcagttcc 44882814  T
Q  448 aactttacgcttcagctcctt------------------agaccttttcttctctattcttttgctaagcaaatccagttttccgtcttctccacgatca 529  Q
    |||||||||||||||||||||                  ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  44882813 aactttacgcttcagctccttagacacttgcttcaaatgagaccttttcttctctattcttttgctaagcaaatccagttttccatcttctccacgatca 44882714  T
Q  530 ttatttccagcaagaggttc 549  Q
    ||||||||||||||||||||    
T  44882713 ttatttccagcaagaggttc 44882694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 570 - 630
Target Start/End: Complemental strand, 44882646 - 44882586
Alignment:
Q  570 attcattttcttcttcatcttgttccttcgagcttatcttaactttacttctgcttaccat 630  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||    
T  44882646 attcattttcttcttcattttgttccttcgagcttatcttaacttttcttctgcttaccat 44882586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 2796225 - 2796174
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcctatat 52  Q
    ||||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  2796225 atttttaaatgacccctaattgcaaggatcaaatacatatttaagcctatat 2796174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 19741274 - 19741321
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcct 48  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||    
T  19741274 atttttaaacgacccctaattgcaaggatcaaatacatatttaagcct 19741321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 40033838 - 40033889
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcctatat 52  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  40033838 atttttaaacgacccctaattgcaaggatgaaatacatatttaagcctatat 40033889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 34142600 - 34142646
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcc 47  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||    
T  34142600 atttttaaacgacccctaattgcaaggatcaaatacatatttaagcc 34142646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 33689428 - 33689381
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcct 48  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||||    
T  33689428 atttttaaacgacccctaattgcaaggatgaaatacatatttaagcct 33689381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 9294340 - 9294386
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcc 47  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||    
T  9294340 atttttaaacgacccctaattgcaaggatgaaatacatatttaagcc 9294386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 40758193 - 40758147
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcc 47  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||    
T  40758193 atttttaaacgacccctaattgcaaggatgaaatacatatttaagcc 40758147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 42342837 - 42342787
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcctata 51  Q
    |||||||||||||||||||||| |||||| |||| ||||||||||||||||    
T  42342837 atttttaaacgacccctaattgtaaggatgaaatacatatttaagcctata 42342787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 51994010 - 51993960
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcctata 51  Q
    |||||||||||||| |||||||||| |||||||| ||||||||||||||||    
T  51994010 atttttaaacgacctctaattgcaaagatcaaatacatatttaagcctata 51993960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 51994268 - 51994313
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagc 46  Q
    |||||||||||| ||||||||||||||||||||| |||||||||||    
T  51994268 atttttaaacgatccctaattgcaaggatcaaatacatatttaagc 51994313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 23458361 - 23458409
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagccta 49  Q
    ||||||||||||||| ||||||||||||| |||| ||||||||||||||    
T  23458361 atttttaaacgacccataattgcaaggatgaaatacatatttaagccta 23458409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 33689761 - 33689809
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagccta 49  Q
    ||||||||||||||||||||||||| ||| |||| ||||||||||||||    
T  33689761 atttttaaacgacccctaattgcaaagatgaaatacatatttaagccta 33689809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 40758492 - 40758540
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagccta 49  Q
    ||||||||| ||||||||||||||||||| |||| ||||||||||||||    
T  40758492 atttttaaatgacccctaattgcaaggatgaaatacatatttaagccta 40758540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 36150573 - 36150530
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaa 44  Q
    ||||||||||||||||||||||||||||| |||| |||||||||    
T  36150573 atttttaaacgacccctaattgcaaggatgaaatacatatttaa 36150530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 3850509 - 3850555
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcc 47  Q
    |||||||||||||||||||||||| |||| |||| ||||||||||||    
T  3850509 atttttaaacgacccctaattgcagggatgaaatacatatttaagcc 3850555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 36418070 - 36418116
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcc 47  Q
    ||||||||||||||||||||| ||||||| |||| ||||||||||||    
T  36418070 atttttaaacgacccctaattacaaggatgaaatacatatttaagcc 36418116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 9292289 - 9292240
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcctat 50  Q
    |||||||||||| |||||||||||||||| |||| |||||||||| ||||    
T  9292289 atttttaaacgatccctaattgcaaggatgaaatacatatttaagtctat 9292240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 9367786 - 9367738
Alignment:
Q  2 tttttaaacgacccctaattgcaaggatcaaatgcatatttaagcctat 50  Q
    ||||||||||||||||||||| | |||| |||| |||||||||||||||    
T  9367786 tttttaaacgacccctaattgtagggattaaatacatatttaagcctat 9367738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 19740969 - 19740921
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagccta 49  Q
    |||||||||||| ||||||||||| | ||||||| ||||||||||||||    
T  19740969 atttttaaacgatccctaattgcatgaatcaaatacatatttaagccta 19740921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 41558054 - 41558006
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagccta 49  Q
    ||||||||||||||| |||||||||| || |||| ||||||||||||||    
T  41558054 atttttaaacgacccataattgcaagaatgaaatacatatttaagccta 41558006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 26463678 - 26463635
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaa 44  Q
    ||||||||||||||| ||||||||||||| |||| |||||||||    
T  26463678 atttttaaacgacccttaattgcaaggatgaaatacatatttaa 26463635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 26463968 - 26464015
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcct 48  Q
    |||||||||||| | |||||||||||||| |||| |||||||||||||    
T  26463968 atttttaaacgatctctaattgcaaggatgaaatacatatttaagcct 26464015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 46474861 - 46474818
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaa 44  Q
    ||||||||||||||||||||||||| ||| |||| |||||||||    
T  46474861 atttttaaacgacccctaattgcaaagatgaaatacatatttaa 46474818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 46475162 - 46475205
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaa 44  Q
    |||||||||||||||||||||| |||||| |||| |||||||||    
T  46475162 atttttaaacgacccctaattgtaaggatgaaatacatatttaa 46475205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 53756790 - 53756747
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaa 44  Q
    ||||||||||||||||||||||||| ||| |||| |||||||||    
T  53756790 atttttaaacgacccctaattgcaaagatgaaatacatatttaa 53756747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 53856439 - 53856486
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcct 48  Q
    |||||||| ||||||||| ||||| ||||||||| |||||||||||||    
T  53856439 atttttaagcgacccctatttgcagggatcaaatacatatttaagcct 53856486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 41558264 - 41558306
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatattta 43  Q
    |||||||||||||||||||||||| |||| |||| ||||||||    
T  41558264 atttttaaacgacccctaattgcagggatgaaatacatattta 41558306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 375 - 429
Target Start/End: Complemental strand, 44913074 - 44913020
Alignment:
Q  375 tgataaagttgagtcctttgagagcattagcagctgcagacgtagtcctatcata 429  Q
    ||||||| ||||||||| | ||||||| || |||||||||| |||||||||||||    
T  44913074 tgataaacttgagtcctctaagagcatgagaagctgcagacttagtcctatcata 44913020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 53856061 - 53856015
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcc 47  Q
    |||||||| ||||||||| ||||| ||||||||| ||||||||||||    
T  53856061 atttttaagcgacccctatttgcagggatcaaatacatatttaagcc 53856015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 35712090 - 35712045
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagc 46  Q
    ||||||||| || |||||||||||||||| |||| |||||||||||    
T  35712090 atttttaaatgatccctaattgcaaggatgaaatacatatttaagc 35712045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 9368683 - 9368723
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatt 41  Q
    ||||||||||||||||||||||||||||  |||| ||||||    
T  9368683 atttttaaacgacccctaattgcaaggacgaaatacatatt 9368723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 43384665 - 43384709
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaag 45  Q
    ||||||||||||  ||||||||||||||| |||| ||||||||||    
T  43384665 atttttaaacgattcctaattgcaaggatgaaatacatatttaag 43384709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 48; Significance: 4e-18; HSPs: 65)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 50418714 - 50418663
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcctatat 52  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  50418714 atttttaaacgacccctaattgcaaggatcaaatacatatttaagcctatat 50418663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 10781866 - 10781916
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcctata 51  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  10781866 atttttaaacgacccctaattgcaaggatcaaatacatatttaagcctata 10781916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 7451880 - 7451832
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagccta 49  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  7451880 atttttaaacgacccctaattgcaaggatcaaatacatatttaagccta 7451832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 13058083 - 13058035
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagccta 49  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  13058083 atttttaaacgacccctaattgcaaggatcaaatacatatttaagccta 13058035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 24349720 - 24349672
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagccta 49  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  24349720 atttttaaacgacccctaattgcaaggatcaaatacatatttaagccta 24349672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 24711462 - 24711510
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagccta 49  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  24711462 atttttaaacgacccctaattgcaaggatcaaatacatatttaagccta 24711510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 50419019 - 50419067
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagccta 49  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  50419019 atttttaaacgacccctaattgcaaggatcaaatacatatttaagccta 50419067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 10780759 - 10780712
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcct 48  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||    
T  10780759 atttttaaacgacccctaattgcaaggatcaaatacatatttaagcct 10780712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 10974368 - 10974321
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcct 48  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||    
T  10974368 atttttaaacgacccctaattgcaaggatcaaatacatatttaagcct 10974321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 23613355 - 23613308
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcct 48  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||    
T  23613355 atttttaaacgacccctaattgcaaggatcaaatacatatttaagcct 23613308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 24350814 - 24350861
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcct 48  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||    
T  24350814 atttttaaacgacccctaattgcaaggatcaaatacatatttaagcct 24350861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 24711157 - 24711110
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcct 48  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||    
T  24711157 atttttaaacgacccctaattgcaaggatcaaatacatatttaagcct 24711110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 48528531 - 48528484
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcct 48  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||    
T  48528531 atttttaaacgacccctaattgcaaggatcaaatacatatttaagcct 48528484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 51692901 - 51692952
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcctatat 52  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  51692901 atttttaaacgacccctaattgcaaggatgaaatacatatttaagcctatat 51692952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 55867496 - 55867547
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcctatat 52  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  55867496 atttttaaacgacccctaattgcagggatcaaatacatatttaagcctatat 55867547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 7452185 - 7452231
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcc 47  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||    
T  7452185 atttttaaacgacccctaattgcaaggatcaaatacatatttaagcc 7452231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 23613660 - 23613706
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcc 47  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||    
T  23613660 atttttaaacgacccctaattgcaaggatcaaatacatatttaagcc 23613706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 49879253 - 49879208
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagc 46  Q
    |||||||||||||||||||||||||||||||||| |||||||||||    
T  49879253 atttttaaacgacccctaattgcaaggatcaaatacatatttaagc 49879208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 34765762 - 34765810
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagccta 49  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||||    
T  34765762 atttttaaacgacccctaattgcaaggataaaatacatatttaagccta 34765810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 44967115 - 44967071
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaag 45  Q
    |||||||||||||||||||||||||||||||||| ||||||||||    
T  44967115 atttttaaacgacccctaattgcaaggatcaaatacatatttaag 44967071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 44967420 - 44967468
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagccta 49  Q
    |||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  44967420 atttttaaacgacctctaattgcaaggatcaaatacatatttaagccta 44967468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 5368993 - 5368946
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcct 48  Q
    |||||||||||| ||||||||||||||||||||| |||||||||||||    
T  5368993 atttttaaacgatccctaattgcaaggatcaaatacatatttaagcct 5368946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 13058364 - 13058411
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcct 48  Q
    ||||||||||||||||| |||||||||||||||| |||||||||||||    
T  13058364 atttttaaacgaccccttattgcaaggatcaaatacatatttaagcct 13058411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 18831395 - 18831348
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcct 48  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||||    
T  18831395 atttttaaacgacccctaattgtaaggatcaaatacatatttaagcct 18831348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 37248587 - 37248630
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaa 44  Q
    |||||||||||||||||||||||||||||||||| |||||||||    
T  37248587 atttttaaacgacccctaattgcaaggatcaaatacatatttaa 37248630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 46661296 - 46661343
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcct 48  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||||    
T  46661296 atttttaaacgacccctaattgcaaggatgaaatacatatttaagcct 46661343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 18831699 - 18831745
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcc 47  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||    
T  18831699 atttttaaacgacccctaattgcaaggatgaaatacatatttaagcc 18831745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 51692599 - 51692549
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcctata 51  Q
    |||||||||||||| |||||||||||||| |||| ||||||||||||||||    
T  51692599 atttttaaacgacctctaattgcaaggatgaaatacatatttaagcctata 51692549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 34765426 - 34765377
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcctat 50  Q
    ||||||||||||||| ||||||||||||| |||| |||||||||||||||    
T  34765426 atttttaaacgacccttaattgcaaggataaaatacatatttaagcctat 34765377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 43155878 - 43155927
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcctat 50  Q
    |||||||||||||||||||||  ||||||||||| |||||||||||||||    
T  43155878 atttttaaacgacccctaattataaggatcaaatacatatttaagcctat 43155927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 148137 - 148185
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagccta 49  Q
    |||||||||||||||||||||||| |||| |||| ||||||||||||||    
T  148137 atttttaaacgacccctaattgcagggatgaaatacatatttaagccta 148185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 15508054 - 15508098
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaag 45  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||    
T  15508054 atttttaaacgacccctaattgcaaggatgaaatacatatttaag 15508098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 16006175 - 16006219
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaag 45  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||    
T  16006175 atttttaaacgacccctaattgcaagaatcaaatacatatttaag 16006219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 24411730 - 24411778
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagccta 49  Q
    ||||||||||||||| ||||||||||||| |||| ||||||||||||||    
T  24411730 atttttaaacgacccttaattgcaaggatgaaatacatatttaagccta 24411778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 35028044 - 35027996
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagccta 49  Q
    ||||||||||||||||||||||||||||| |||| ||||||||| ||||    
T  35028044 atttttaaacgacccctaattgcaaggatgaaatacatatttaaaccta 35027996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 35508622 - 35508670
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagccta 49  Q
    ||||||||||||||||||||||||| ||| |||| ||||||||||||||    
T  35508622 atttttaaacgacccctaattgcaatgataaaatacatatttaagccta 35508670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 36008890 - 36008842
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagccta 49  Q
    |||||||||||| |||||||| |||||||||||| ||||||||||||||    
T  36008890 atttttaaacgatccctaattacaaggatcaaatacatatttaagccta 36008842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 37248282 - 37248238
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaag 45  Q
    ||||||||||||||||||||||||||| |||||| ||||||||||    
T  37248282 atttttaaacgacccctaattgcaaggttcaaatacatatttaag 37248238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 39539300 - 39539348
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagccta 49  Q
    ||||||||||||||| ||||||||||||| |||| ||||||||||||||    
T  39539300 atttttaaacgacccttaattgcaaggatgaaatacatatttaagccta 39539348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 1179182 - 1179229
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcct 48  Q
    ||||||||||||||||||||||||| ||| |||| |||||||||||||    
T  1179182 atttttaaacgacccctaattgcaaagataaaatacatatttaagcct 1179229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 14801782 - 14801735
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcct 48  Q
    ||||||||||||| ||||||||||||||| |||| |||||||||||||    
T  14801782 atttttaaacgactcctaattgcaaggatgaaatacatatttaagcct 14801735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 17355971 - 17355924
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcct 48  Q
    ||||||||||||| ||||||||||||||| |||| |||||||||||||    
T  17355971 atttttaaacgactcctaattgcaaggatgaaatacatatttaagcct 17355924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 43155575 - 43155532
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaa 44  Q
    ||||||||||||||| |||||||||||||||||| |||||||||    
T  43155575 atttttaaacgacccttaattgcaaggatcaaatacatatttaa 43155532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 53129888 - 53129935
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcct 48  Q
    ||||||||||||||||| ||||||||||| |||| |||||||||||||    
T  53129888 atttttaaacgacccctgattgcaaggatgaaatacatatttaagcct 53129935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 54086741 - 54086698
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaa 44  Q
    ||||||||||||||||||||||||||||| |||| |||||||||    
T  54086741 atttttaaacgacccctaattgcaaggatgaaatacatatttaa 54086698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 15507719 - 15507674
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagc 46  Q
    ||||||||||||||| ||||||||||||| |||| |||||||||||    
T  15507719 atttttaaacgacccttaattgcaaggatgaaatacatatttaagc 15507674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 36009195 - 36009244
Alignment:
Q  1 atttttaaacgacccc-taattgcaaggatcaaatgcatatttaagccta 49  Q
    |||||||||||||||| ||||| |||||||||||| ||||||||||||||    
T  36009195 atttttaaacgaccccctaattacaaggatcaaatacatatttaagccta 36009244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 49879559 - 49879596
Alignment:
Q  2 tttttaaacgacccctaattgcaaggatcaaatgcata 39  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  49879559 tttttaaacgacccctaattgcaaggatcaaatacata 49879596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 37976535 - 37976583
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagccta 49  Q
    ||||||||||||||||||||||| | ||| |||| ||||||||||||||    
T  37976535 atttttaaacgacccctaattgccatgatgaaatacatatttaagccta 37976583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 53701858 - 53701814
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaag 45  Q
    ||||||||||||||||||||||||||||| ||||  |||||||||    
T  53701858 atttttaaacgacccctaattgcaaggatgaaatagatatttaag 53701814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 1178103 - 1178056
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcct 48  Q
    |||||||||||||| |||||| ||||||| |||| |||||||||||||    
T  1178103 atttttaaacgacctctaattacaaggatgaaatacatatttaagcct 1178056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 11108222 - 11108265
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaa 44  Q
    |||||||||||| |||||||||||||||| |||| |||||||||    
T  11108222 atttttaaacgatccctaattgcaaggatgaaatacatatttaa 11108265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 35028380 - 35028427
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcct 48  Q
    |||||||||  |||||||||||||||||| |||| |||||||||||||    
T  35028380 atttttaaaatacccctaattgcaaggatgaaatacatatttaagcct 35028427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 147365 - 147319
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcc 47  Q
    |||||||||||||||||||||| | |||| |||| ||||||||||||    
T  147365 atttttaaacgacccctaattgtagggatgaaatacatatttaagcc 147319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 5369249 - 5369295
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcc 47  Q
    |||||||||||||||||| ||  ||||||||||| ||||||||||||    
T  5369249 atttttaaacgacccctacttataaggatcaaatacatatttaagcc 5369295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 37976198 - 37976156
Alignment:
Q  2 tttttaaacgacccctaattgcaaggatcaaatgcatatttaa 44  Q
    ||||||||||||| |||||||||||||| |||| |||||||||    
T  37976198 tttttaaacgacctctaattgcaaggatgaaatacatatttaa 37976156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 2 - 48
Target Start/End: Complemental strand, 53129551 - 53129505
Alignment:
Q  2 tttttaaacgacccctaattgcaaggatcaaatgcatatttaagcct 48  Q
    ||||||||||| |||||||||||| ||| |||| |||||||||||||    
T  53129551 tttttaaacgatccctaattgcaatgataaaatacatatttaagcct 53129505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 55866157 - 55866111
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcc 47  Q
    |||||||||||||||||||||||| |||  |||| ||||||||||||    
T  55866157 atttttaaacgacccctaattgcagggacgaaatacatatttaagcc 55866111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 16005884 - 16005843
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatattt 42  Q
    |||||||||||||||||||||  ||||||||||| |||||||    
T  16005884 atttttaaacgacccctaattataaggatcaaatacatattt 16005843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 24411404 - 24411355
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcctat 50  Q
    |||||||||| |||||||||||| ||||| |||| |||||||||| ||||    
T  24411404 atttttaaactacccctaattgctaggatgaaatacatatttaagtctat 24411355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 52909299 - 52909254
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagc 46  Q
    |||||| |||||||||||||||||| ||| |||| |||||||||||    
T  52909299 atttttgaacgacccctaattgcaaagatgaaatacatatttaagc 52909254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 52909635 - 52909684
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcctat 50  Q
    ||||||||| || || ||||||||||||| |||| |||||||||||||||    
T  52909635 atttttaaatgatccataattgcaaggatgaaatacatatttaagcctat 52909684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 17356304 - 17356348
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaag 45  Q
    ||||||||||||||| |||||| |||||| |||| ||||||||||    
T  17356304 atttttaaacgacccgtaattggaaggatgaaatacatatttaag 17356348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 54087077 - 54087121
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaag 45  Q
    ||||||||||||||||||||| ||| ||| |||| ||||||||||    
T  54087077 atttttaaacgacccctaattacaatgatgaaatacatatttaag 54087121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 54435479 - 54435527
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagccta 49  Q
    ||||||||||||| |||||||||||| |  |||| ||||||||||||||    
T  54435479 atttttaaacgacacctaattgcaagcacgaaatacatatttaagccta 54435527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 47; Significance: 2e-17; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 12198996 - 12198946
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcctata 51  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  12198996 atttttaaacgacccctaattgcaaggatcaaatacatatttaagcctata 12198946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 12443424 - 12443374
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcctata 51  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  12443424 atttttaaacgacccctaattgcaaggatcaaatacatatttaagcctata 12443374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 23663591 - 23663543
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagccta 49  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||    
T  23663591 atttttaaacgacccctaattgcaaggatgaaatgcatatttaagccta 23663543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 23663896 - 23663944
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagccta 49  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  23663896 atttttaaacgacccctaattgcaaggatcaaatacatatttaagccta 23663944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 8316699 - 8316652
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcct 48  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  8316699 atttttaaacgacccctaattgcaaggatgaaatgcatatttaagcct 8316652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 8316970 - 8317017
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcct 48  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||    
T  8316970 atttttaaacgacccctaattgcaaggatcaaatacatatttaagcct 8317017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 20386812 - 20386859
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcct 48  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||    
T  20386812 atttttaaacgacccctaattgcaaggatcaaatacatatttaagcct 20386859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 20385614 - 20385568
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcc 47  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||    
T  20385614 atttttaaacgacccctaattgcaaggatcaaatacatatttaagcc 20385568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 38956054 - 38956100
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcc 47  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||    
T  38956054 atttttaaacgacccctaattgcaaggatcaaatacatatttaagcc 38956100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 23698626 - 23698683
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcctatatgatttg 58  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||||| || |||||    
T  23698626 atttttaaacgacccctaattacaaggatcaaatacatatttaagcctaaataatttg 23698683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 1425099 - 1425051
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagccta 49  Q
    |||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  1425099 atttttaaacgacccctaattgcaaggatcaaatacatatttaaaccta 1425051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 12273235 - 12273283
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagccta 49  Q
    |||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  12273235 atttttaaacgacccctaattgcaaggatcaaatacatatttaaaccta 12273283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 16388629 - 16388581
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagccta 49  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||||    
T  16388629 atttttaaacgacccctaattgcaaggatgaaatacatatttaagccta 16388581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 33357544 - 33357496
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagccta 49  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||||    
T  33357544 atttttaaacgacccctaattgcaaggatgaaatacatatttaagccta 33357496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 39071722 - 39071676
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcc 47  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||    
T  39071722 atttttaaacgacccctaattgcaaggatgaaatacatatttaagcc 39071676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 7313387 - 7313435
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagccta 49  Q
    |||||||||||||||||| ||||| ||||||||| ||||||||||||||    
T  7313387 atttttaaacgacccctatttgcagggatcaaatacatatttaagccta 7313435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 12272964 - 12272920
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaag 45  Q
    |||||||||||| ||||||||||||||||||||| ||||||||||    
T  12272964 atttttaaacgatccctaattgcaaggatcaaatacatatttaag 12272920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 13186441 - 13186489
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagccta 49  Q
    ||||||||||||||||||||||||||||| ||||  |||||||||||||    
T  13186441 atttttaaacgacccctaattgcaaggatgaaatatatatttaagccta 13186489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 40318010 - 40317966
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaag 45  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||    
T  40318010 atttttaaacgacccctaattgcaaggatgaaatacatatttaag 40317966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 4995038 - 4995085
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcct 48  Q
    ||||||||| ||||||||||||||||||| |||| |||||||||||||    
T  4995038 atttttaaatgacccctaattgcaaggatgaaatacatatttaagcct 4995085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 7306445 - 7306398
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcct 48  Q
    |||||||||||||||||| ||||| ||||||||| |||||||||||||    
T  7306445 atttttaaacgacccctatttgcagggatcaaatacatatttaagcct 7306398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 13186106 - 13186059
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcct 48  Q
    |||||||||||| |||||||||||||||| |||| |||||||||||||    
T  13186106 atttttaaacgatccctaattgcaaggatgaaatacatatttaagcct 13186059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 22915740 - 22915787
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcct 48  Q
    |||||||||||| ||||| ||||||||||||||| |||||||||||||    
T  22915740 atttttaaacgatccctagttgcaaggatcaaatacatatttaagcct 22915787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 23698355 - 23698308
Alignment:
Q  1 atttttaaacgacccc-taattgcaaggatcaaatgcatatttaagcc 47  Q
    |||||||||||||||| |||||||||||||||||| ||||||||||||    
T  23698355 atttttaaacgaccccctaattgcaaggatcaaatacatatttaagcc 23698308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 38862945 - 38862988
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaa 44  Q
    ||||||||||||||||||||||||||||| |||| |||||||||    
T  38862945 atttttaaacgacccctaattgcaaggatgaaatacatatttaa 38862988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 40318346 - 40318393
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcct 48  Q
    |||||||||| |||||||||||||||||| |||| |||||||||||||    
T  40318346 atttttaaacaacccctaattgcaaggatgaaatacatatttaagcct 40318393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 16388908 - 16388954
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcc 47  Q
    ||||||||| ||||||||||||||||||| |||| ||||||||||||    
T  16388908 atttttaaatgacccctaattgcaaggatgaaatacatatttaagcc 16388954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 34685639 - 34685685
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcc 47  Q
    |||||||||||| |||||||||||||||| |||| ||||||||||||    
T  34685639 atttttaaacgatccctaattgcaaggataaaatacatatttaagcc 34685685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 3 - 49
Target Start/End: Original strand, 36186448 - 36186494
Alignment:
Q  3 ttttaaacgacccctaattgcaaggatcaaatgcatatttaagccta 49  Q
    ||||||||||||| ||||||||||||| |||| ||||||||||||||    
T  36186448 ttttaaacgacccttaattgcaaggatgaaatacatatttaagccta 36186494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 38955749 - 38955703
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcc 47  Q
    |||||||||||| ||| ||||||||||||||||| ||||||||||||    
T  38955749 atttttaaacgatccccaattgcaaggatcaaatacatatttaagcc 38955703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 30712098 - 30712143
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagc 46  Q
    ||||||||||| |||||||| ||||||||||||| |||||||||||    
T  30712098 atttttaaacggcccctaatcgcaaggatcaaatacatatttaagc 30712143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 30719875 - 30719920
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagc 46  Q
    ||||||||||| |||||||| ||||||||||||| |||||||||||    
T  30719875 atttttaaacggcccctaatcgcaaggatcaaatacatatttaagc 30719920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 39072023 - 39072071
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagccta 49  Q
    ||||||||||||||| | ||||||||||| |||| ||||||||||||||    
T  39072023 atttttaaacgacccttgattgcaaggatgaaatacatatttaagccta 39072071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 4406042 - 4406088
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcc 47  Q
    |||||||||| |||||||||| ||||||| |||| ||||||||||||    
T  4406042 atttttaaacaacccctaattacaaggatgaaatacatatttaagcc 4406088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 30459417 - 30459371
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcc 47  Q
    ||||||||||||| |||||||| |||||| |||| ||||||||||||    
T  30459417 atttttaaacgacgcctaattgtaaggatgaaatacatatttaagcc 30459371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 31608895 - 31608941
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcc 47  Q
    ||||||||||||||| ||||||||||||| |||| | ||||||||||    
T  31608895 atttttaaacgacccttaattgcaaggatgaaatacttatttaagcc 31608941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 42803600 - 42803646
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcc 47  Q
    |||||||||||||  |||||||||||||| |||| ||||||||||||    
T  42803600 atttttaaacgacttctaattgcaaggatgaaatacatatttaagcc 42803646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 1425403 - 1425448
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagc 46  Q
    |||||||||||||| |||||| ||||||||||||  ||||||||||    
T  1425403 atttttaaacgacctctaattacaaggatcaaatatatatttaagc 1425448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 4994703 - 4994655
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagccta 49  Q
    |||||||||| | |||||||||||| ||| |||| ||||||||||||||    
T  4994703 atttttaaacaatccctaattgcaacgatgaaatacatatttaagccta 4994655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 7295309 - 7295357
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagccta 49  Q
    |||||||||||| || ||||||||||||| |||| ||||||||| ||||    
T  7295309 atttttaaacgatccataattgcaaggataaaatacatatttaaaccta 7295357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 9065711 - 9065667
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaag 45  Q
    ||||||||||||||||||||| ||| ||| |||| ||||||||||    
T  9065711 atttttaaacgacccctaattacaaagatgaaatacatatttaag 9065667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 12199288 - 12199332
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaag 45  Q
    ||||||||||||| |||||||  ||||||||||| ||||||||||    
T  12199288 atttttaaacgactcctaattataaggatcaaatacatatttaag 12199332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 12443716 - 12443760
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaag 45  Q
    ||||||||||||| |||||||  ||||||||||| ||||||||||    
T  12443716 atttttaaacgactcctaattataaggatcaaatacatatttaag 12443760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 34060535 - 34060487
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagccta 49  Q
    |||||||||||||   ||||||||||||| |||| ||||||||||||||    
T  34060535 atttttaaacgacgtttaattgcaaggatgaaatacatatttaagccta 34060487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 34177352 - 34177396
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaag 45  Q
    ||||||||||||||||||||| ||| ||| |||| ||||||||||    
T  34177352 atttttaaacgacccctaattacaaagatgaaatacatatttaag 34177396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 3 - 47
Target Start/End: Complemental strand, 38862662 - 38862618
Alignment:
Q  3 ttttaaacgacccctaattgcaaggatcaaatgcatatttaagcc 47  Q
    ||||||||| ||| ||||||||||||| |||| ||||||||||||    
T  38862662 ttttaaacggcccttaattgcaaggatgaaatacatatttaagcc 38862618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 6e-17; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 681110 - 681159
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcctat 50  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  681110 atttttaaacgacccctaattgcaaggatcaaatacatatttaagcctat 681159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 30337495 - 30337442
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcctatatga 54  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||| ||||    
T  30337495 atttttaaacgacccctaattgcaaggatcaaatacatatttaagcctacatga 30337442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 17734242 - 17734195
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcct 48  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||    
T  17734242 atttttaaacgacccctaattgcaaggatcaaatacatatttaagcct 17734195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 13379864 - 13379914
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcctata 51  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  13379864 atttttaaacgacccctaattgcagggatcaaatacatatttaagcctata 13379914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 30726141 - 30726190
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcctat 50  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||||||    
T  30726141 atttttaaacgacccctaattgcaaggatgaaatacatatttaagcctat 30726190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 26463225 - 26463177
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagccta 49  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  26463225 atttttaaacgacccctaattgcagggatcaaatacatatttaagccta 26463177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 33647333 - 33647381
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagccta 49  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||||    
T  33647333 atttttaaacgacccctaattgcaaggatgaaatacatatttaagccta 33647381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 679912 - 679865
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcct 48  Q
    ||||||||||||||| |||||||||||||||||| |||||||||||||    
T  679912 atttttaaacgacccttaattgcaaggatcaaatacatatttaagcct 679865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 3059638 - 3059685
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcct 48  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||||    
T  3059638 atttttaaacgacccctaattgcaaggatgaaatacatatttaagcct 3059685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 33517916 - 33517963
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcct 48  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||||    
T  33517916 atttttaaacgacccctaattgcaaggatgaaatacatatttaagcct 33517963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 30337800 - 30337846
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcc 47  Q
    ||||||||| |||||||||||||||||||||||| ||||||||||||    
T  30337800 atttttaaatgacccctaattgcaaggatcaaatacatatttaagcc 30337846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 8090309 - 8090357
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagccta 49  Q
    |||||||||||||||||||||||||||||  ||| ||||||||||||||    
T  8090309 atttttaaacgacccctaattgcaaggatgtaatacatatttaagccta 8090357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 12081018 - 12081066
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagccta 49  Q
    ||||||||||||| ||||||||||||||| |||| ||||||||||||||    
T  12081018 atttttaaacgactcctaattgcaaggatgaaatacatatttaagccta 12081066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 20651056 - 20651008
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagccta 49  Q
    |||||||||||| ||||||||||| ||||||||| ||||||||||||||    
T  20651056 atttttaaacgatccctaattgcagggatcaaatacatatttaagccta 20651008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 30804243 - 30804291
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagccta 49  Q
    ||||||||||||||||||||||||||||| |||| ||||||||| ||||    
T  30804243 atttttaaacgacccctaattgcaaggatgaaatacatatttaatccta 30804291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 17734545 - 17734596
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcctatat 52  Q
    ||||||||||||||| |||||| ||||||||||| ||||||||||| |||||    
T  17734545 atttttaaacgacccataattgtaaggatcaaatacatatttaagcatatat 17734596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 21628095 - 21628142
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcct 48  Q
    |||||||| |||||||||||||||||||| |||| |||||||||||||    
T  21628095 atttttaagcgacccctaattgcaaggatgaaatacatatttaagcct 21628142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 12080682 - 12080633
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcctat 50  Q
    ||||||||||||||||||||||||||||| |||| || ||||||| ||||    
T  12080682 atttttaaacgacccctaattgcaaggatgaaatacaaatttaagactat 12080633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 3059301 - 3059253
Alignment:
Q  3 ttttaaacgacccctaattgcaaggatcaaatgcatatttaagcctata 51  Q
    ||||||||||||| ||||||||||||| |||| ||||||||| ||||||    
T  3059301 ttttaaacgacccttaattgcaaggatgaaatacatatttaaacctata 3059253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 11434848 - 11434804
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaag 45  Q
    ||||||||||||||| ||||||||||||| |||| ||||||||||    
T  11434848 atttttaaacgacccttaattgcaaggatgaaatacatatttaag 11434804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 3 - 51
Target Start/End: Original strand, 12408555 - 12408603
Alignment:
Q  3 ttttaaacgacccctaattgcaaggatcaaatgcatatttaagcctata 51  Q
    |||||||| ||||||||||| |||||| |||| ||||||||||||||||    
T  12408555 ttttaaacaacccctaattgtaaggatgaaatacatatttaagcctata 12408603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 22617929 - 22617886
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaa 44  Q
    ||||||||||||| ||||||||||||||| |||| |||||||||    
T  22617929 atttttaaacgactcctaattgcaaggatgaaatacatatttaa 22617886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 30803907 - 30803856
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcctatat 52  Q
    ||||||||||||| |||| |||||||||| |||| ||||||||| |||||||    
T  30803907 atttttaaacgacacctagttgcaaggatgaaatacatatttaaccctatat 30803856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 15115385 - 15115339
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcc 47  Q
    |||||||||||| | |||||||||||||| |||| ||||||||||||    
T  15115385 atttttaaacgatctctaattgcaaggatgaaatacatatttaagcc 15115339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 15116614 - 15116660
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcc 47  Q
    ||||||||||||||||||||||||||||  |||| |||||| |||||    
T  15116614 atttttaaacgacccctaattgcaaggacgaaatacatattaaagcc 15116660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 47
Target Start/End: Original strand, 26464582 - 26464627
Alignment:
Q  2 tttttaaacgacccctaattgcaaggatcaaatgcatatttaagcc 47  Q
    |||||||| |||||||||||||| |||| |||| ||||||||||||    
T  26464582 tttttaaatgacccctaattgcagggatgaaatacatatttaagcc 26464627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 6e-17; HSPs: 62)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 28770915 - 28770866
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcctat 50  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  28770915 atttttaaacgacccctaattgcaaggatcaaatacatatttaagcctat 28770866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 38475381 - 38475429
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagccta 49  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||    
T  38475381 atttttaaacgacccctaattgcaaggatgaaatgcatatttaagccta 38475429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 3528919 - 3528872
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcct 48  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||    
T  3528919 atttttaaacgacccctaattgcaaggatcaaatacatatttaagcct 3528872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 11761795 - 11761748
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcct 48  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||    
T  11761795 atttttaaacgacccctaattgcaaggatcaaatacatatttaagcct 11761748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 11762099 - 11762146
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcct 48  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||    
T  11762099 atttttaaacgacccctaattgcaaggatcaaatacatatttaagcct 11762146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 24547507 - 24547554
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcct 48  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||    
T  24547507 atttttaaacgacccctaattgcaaggatcaaatacatatttaagcct 24547554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 27587497 - 27587548
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcctatat 52  Q
    |||||||||||||||||||||||||||||||||| |||||||||||| ||||    
T  27587497 atttttaaacgacccctaattgcaaggatcaaatacatatttaagccaatat 27587548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 3529224 - 3529270
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcc 47  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||    
T  3529224 atttttaaacgacccctaattgcaaggatcaaatacatatttaagcc 3529270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 27587194 - 27587148
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcc 47  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||    
T  27587194 atttttaaacgacccctaattgcaaggatcaaatacatatttaagcc 27587148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 20814517 - 20814566
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcctat 50  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||||||    
T  20814517 atttttaaacgacccctaattgcaaggatgaaatacatatttaagcctat 20814566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 5993935 - 5993887
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagccta 49  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||||    
T  5993935 atttttaaacgacccctaattgcaaggatgaaatacatatttaagccta 5993887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 6150802 - 6150850
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagccta 49  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||||    
T  6150802 atttttaaacgacccctaattgcaaggatgaaatacatatttaagccta 6150850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 14194469 - 14194421
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagccta 49  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||||    
T  14194469 atttttaaacgacccctaattgcaaggatgaaatacatatttaagccta 14194421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 20840579 - 20840531
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagccta 49  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||||    
T  20840579 atttttaaacgacccctaattgcaaggatgaaatacatatttaagccta 20840531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 6150500 - 6150453
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcct 48  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||||    
T  6150500 atttttaaacgacccctaattgcaaggatgaaatacatatttaagcct 6150453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 16157237 - 16157284
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcct 48  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||||    
T  16157237 atttttaaacgacccctaattgcaaggatgaaatacatatttaagcct 16157284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 5024065 - 5024019
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcc 47  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||    
T  5024065 atttttaaacgacccctaattgcaaggatgaaatacatatttaagcc 5024019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 17202781 - 17202827
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcc 47  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||    
T  17202781 atttttaaacgacccctaattgcaaggatgaaatacatatttaagcc 17202827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 28771220 - 28771266
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcc 47  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||||    
T  28771220 atttttaaacgacccctaattacaaggatcaaatacatatttaagcc 28771266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 39453346 - 39453296
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcctata 51  Q
    ||||||||||||||||||||||||||||| |||| |||||||||| |||||    
T  39453346 atttttaaacgacccctaattgcaaggatgaaatacatatttaagtctata 39453296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 18247132 - 18247087
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagc 46  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||    
T  18247132 atttttaaacgacccctaattgcaaggatgaaatacatatttaagc 18247087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 3 - 48
Target Start/End: Original strand, 18247460 - 18247505
Alignment:
Q  3 ttttaaacgacccctaattgcaaggatcaaatgcatatttaagcct 48  Q
    ||||||||||||||||||||||||||| |||| |||||||||||||    
T  18247460 ttttaaacgacccctaattgcaaggatgaaatacatatttaagcct 18247505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 20840819 - 20840868
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcctat 50  Q
    |||||||||||||||||||||| |||||| |||| |||||||||||||||    
T  20840819 atttttaaacgacccctaattgtaaggatgaaatacatatttaagcctat 20840868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 38442449 - 38442494
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagc 46  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||    
T  38442449 atttttaaacgacccctaattgcaaggatgaaatacatatttaagc 38442494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 13962910 - 13962862
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagccta 49  Q
    ||||||||||||||||||||||||||||| ||||  |||||||||||||    
T  13962910 atttttaaacgacccctaattgcaaggataaaatatatatttaagccta 13962862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 19892354 - 19892310
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaag 45  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||    
T  19892354 atttttaaacgacccctaattgcaaggatgaaatacatatttaag 19892310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 24547223 - 24547175
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagccta 49  Q
    |||||| ||||||||||||||||||||||||| | ||||||||||||||    
T  24547223 attttttaacgacccctaattgcaaggatcaagtacatatttaagccta 24547175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 28269468 - 28269420
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagccta 49  Q
    ||||||||||||||||||||||||| ||| |||| ||||||||||||||    
T  28269468 atttttaaacgacccctaattgcaatgatgaaatacatatttaagccta 28269420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 32242288 - 32242240
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagccta 49  Q
    ||||||||||||||||||||||||||||| |||| ||||||||| ||||    
T  32242288 atttttaaacgacccctaattgcaaggatgaaatacatatttaacccta 32242240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 35512496 - 35512540
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaag 45  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||    
T  35512496 atttttaaacgacccctaattgcaaggatgaaatacatatttaag 35512540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 5024400 - 5024443
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaa 44  Q
    ||||||||||||||||||||||||||||| |||| |||||||||    
T  5024400 atttttaaacgacccctaattgcaaggatgaaatacatatttaa 5024443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 11740733 - 11740690
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaa 44  Q
    ||||||||||||||||||||||||||||| |||| |||||||||    
T  11740733 atttttaaacgacccctaattgcaaggatgaaatacatatttaa 11740690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 18670248 - 18670201
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcct 48  Q
    |||||||||||||||||| |||||||||| |||| |||||||||||||    
T  18670248 atttttaaacgacccctacttgcaaggatgaaatacatatttaagcct 18670201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 29646408 - 29646357
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcctatat 52  Q
    ||||||||| ||||||||||| ||||||| |||| |||||||||||||||||    
T  29646408 atttttaaaagacccctaattacaaggataaaatacatatttaagcctatat 29646357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 32242623 - 32242670
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcct 48  Q
    |||||||||| |||||||||||||||||| |||| |||||||||||||    
T  32242623 atttttaaacaacccctaattgcaaggatgaaatacatatttaagcct 32242670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 39453681 - 39453728
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcct 48  Q
    ||||||||| ||||||||||||||||||| |||| |||||||||||||    
T  39453681 atttttaaatgacccctaattgcaaggatgaaatacatatttaagcct 39453728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 42265781 - 42265734
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcct 48  Q
    |||||||||||||||||||||||| |||| |||| |||||||||||||    
T  42265781 atttttaaacgacccctaattgcagggatgaaatacatatttaagcct 42265734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 43159196 - 43159239
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaa 44  Q
    ||||||||||||||||||||||||||||| |||| |||||||||    
T  43159196 atttttaaacgacccctaattgcaaggatgaaatacatatttaa 43159239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 186801 - 186847
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcc 47  Q
    |||||||||||||| |||||||||||||| |||| ||||||||||||    
T  186801 atttttaaacgacctctaattgcaaggatgaaatacatatttaagcc 186847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 8322786 - 8322827
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatattt 42  Q
    ||||||||||||||||||||||||||||| |||| |||||||    
T  8322786 atttttaaacgacccctaattgcaaggatgaaatacatattt 8322827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 16156901 - 16156856
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagc 46  Q
    |||||||||||||||||||||||||| || |||| |||||||||||    
T  16156901 atttttaaacgacccctaattgcaagtatgaaatacatatttaagc 16156856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 19517989 - 19518034
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagc 46  Q
    |||||||||| |||||||||||||||||| |||| |||||||||||    
T  19517989 atttttaaactacccctaattgcaaggatgaaatacatatttaagc 19518034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 28269762 - 28269810
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcctat 50  Q
    ||||||||||||||||||||||||| ||| |||| |||||||||||||||    
T  28269762 atttttaaacgacccctaattgcaa-gatgaaatacatatttaagcctat 28269810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 19892690 - 19892734
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaag 45  Q
    |||||||||||||| |||||||||||||| |||| ||||||||||    
T  19892690 atttttaaacgacctctaattgcaaggatgaaatacatatttaag 19892734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 20814182 - 20814134
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagccta 49  Q
    |||||||||||||| ||||||| |||||| |||| ||||||||||||||    
T  20814182 atttttaaacgacctctaattgtaaggatgaaatacatatttaagccta 20814134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 35512194 - 35512146
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagccta 49  Q
    ||||||||||||||| ||||||||||||| |||| ||||||||| ||||    
T  35512194 atttttaaacgacccttaattgcaaggatgaaatacatatttaaaccta 35512146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 37991245 - 37991197
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagccta 49  Q
    |||||||||||||||||||||||| |||| || | ||||||||||||||    
T  37991245 atttttaaacgacccctaattgcagggatgaatttcatatttaagccta 37991197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 37992670 - 37992714
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaag 45  Q
    |||||||||||||||||||||||| |||| |||| ||||||||||    
T  37992670 atttttaaacgacccctaattgcatggatgaaatacatatttaag 37992714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 11047818 - 11047861
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaa 44  Q
    |||||||||||||||||| |||||||||| |||| |||||||||    
T  11047818 atttttaaacgacccctacttgcaaggatgaaatacatatttaa 11047861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 13362610 - 13362653
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaa 44  Q
    ||||||||||||||||||||||||| ||| |||| |||||||||    
T  13362610 atttttaaacgacccctaattgcaatgatgaaatacatatttaa 13362653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 16083325 - 16083372
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcct 48  Q
    |||||||||||| || ||||||||||||| |||| |||||||||||||    
T  16083325 atttttaaacgatccttaattgcaaggatgaaatacatatttaagcct 16083372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 17202445 - 17202398
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcct 48  Q
    |||||||||||||||||||||| |||||| ||||  ||||||||||||    
T  17202445 atttttaaacgacccctaattggaaggatgaaatatatatttaagcct 17202398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 21257543 - 21257586
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaa 44  Q
    |||||||||||||||||||||||| |||| |||| |||||||||    
T  21257543 atttttaaacgacccctaattgcagggatgaaatacatatttaa 21257586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 21265524 - 21265571
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcct 48  Q
    ||||||||||||||| |||||| |||||| |||| |||||||||||||    
T  21265524 atttttaaacgacccttaattgtaaggatgaaatacatatttaagcct 21265571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 27937381 - 27937424
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaa 44  Q
    ||||||||||||||| ||||||||||||| |||| |||||||||    
T  27937381 atttttaaacgacccataattgcaaggatgaaatacatatttaa 27937424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 13963211 - 13963261
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcctata 51  Q
    ||||||||||||||| ||||| ||||||| ||||  |||||||||||||||    
T  13963211 atttttaaacgacccataattacaaggatgaaatatatatttaagcctata 13963261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 14194804 - 14194854
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcctata 51  Q
    ||||||||||||||||||||| ||||||| |||  ||| ||||||||||||    
T  14194804 atttttaaacgacccctaattacaaggatgaaagacatttttaagcctata 14194854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 12 - 50
Target Start/End: Complemental strand, 27937090 - 27937052
Alignment:
Q  12 acccctaattgcaaggatcaaatgcatatttaagcctat 50  Q
    |||||||||||||||||| |||| |||||||||||||||    
T  27937090 acccctaattgcaaggatgaaatacatatttaagcctat 27937052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 35920566 - 35920612
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcc 47  Q
    ||||||||||||||||||||||| | ||| |||| ||||||||||||    
T  35920566 atttttaaacgacccctaattgctatgatgaaatacatatttaagcc 35920612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 11741899 - 11741944
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagc 46  Q
    ||||||||| ||||||||||| ||||||| |||| |||||||||||    
T  11741899 atttttaaatgacccctaattacaaggatgaaatacatatttaagc 11741944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 6301925 - 6301970
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcct 48  Q
    |||||||||||||||||||||||||  || |||| |||||||||||||    
T  6301925 atttttaaacgacccctaattgcaa--atgaaatacatatttaagcct 6301970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 16083023 - 16082979
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaag 45  Q
    |||||||||| ||||||||||| |||||| |||| ||||||||||    
T  16083023 atttttaaacaacccctaattggaaggatgaaatacatatttaag 16082979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 45; Significance: 3e-16; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 17102371 - 17102419
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagccta 49  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  17102371 atttttaaacgacccctaattgcaaggatcaaatacatatttaagccta 17102419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 6253822 - 6253869
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcct 48  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||    
T  6253822 atttttaaacgacccctaattgcaaggatcaaatacatatttaagcct 6253869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 6571059 - 6571012
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcct 48  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||    
T  6571059 atttttaaacgacccctaattgcaaggatcaaatacatatttaagcct 6571012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 17102066 - 17102019
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcct 48  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||    
T  17102066 atttttaaacgacccctaattgcaaggatcaaatacatatttaagcct 17102019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 2 - 48
Target Start/End: Complemental strand, 32298822 - 32298776
Alignment:
Q  2 tttttaaacgacccctaattgcaaggatcaaatgcatatttaagcct 48  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||    
T  32298822 tttttaaacgacccctaattgcaaggatcaaatacatatttaagcct 32298776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 6253517 - 6253472
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagc 46  Q
    |||||||||||||||||||||||||||||||||| |||||||||||    
T  6253517 atttttaaacgacccctaattgcaaggatcaaatacatatttaagc 6253472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 28469390 - 28469439
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcctat 50  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||||||    
T  28469390 atttttaaacgacccctaattgcaaggatgaaatacatatttaagcctat 28469439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 5457289 - 5457337
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagccta 49  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||||    
T  5457289 atttttaaacgacccctaattgcaaggatgaaatacatatttaagccta 5457337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 27396977 - 27397025
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagccta 49  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||||    
T  27396977 atttttaaacgacccctaattgcaaggatgaaatacatatttaagccta 27397025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 45010986 - 45011034
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagccta 49  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||||    
T  45010986 atttttaaacgacccctaattgcaaggatgaaatacatatttaagccta 45011034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 19204535 - 19204488
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcct 48  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||||    
T  19204535 atttttaaacgacccctaatttcaaggatcaaatacatatttaagcct 19204488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 22871659 - 22871706
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcct 48  Q
    ||||||||| |||||||||||||||||||||||| |||||||||||||    
T  22871659 atttttaaatgacccctaattgcaaggatcaaatacatatttaagcct 22871706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 24389167 - 24389214
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcct 48  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||||    
T  24389167 atttttaaacgacccctaattgcaaggatgaaatacatatttaagcct 24389214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 27991785 - 27991738
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcct 48  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||    
T  27991785 atttctaaacgacccctaattgcaaggatcaaatacatatttaagcct 27991738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 27992090 - 27992133
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaa 44  Q
    |||||||||||||||||||||||||||||||||| |||||||||    
T  27992090 atttttaaacgacccctaattgcaaggatcaaatacatatttaa 27992133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 28469056 - 28469009
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcct 48  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||||    
T  28469056 atttttaaacgacccctaattgcaaggatgaaatacatatttaagcct 28469009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 42731801 - 42731852
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcctatat 52  Q
    ||||||||||||||||||||| ||||||| |||| |||||||||||||||||    
T  42731801 atttttaaacgacccctaattacaaggatgaaatacatatttaagcctatat 42731852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 2 - 47
Target Start/End: Original strand, 18670246 - 18670291
Alignment:
Q  2 tttttaaacgacccctaattgcaaggatcaaatgcatatttaagcc 47  Q
    |||||||||||||||||||||||||||| |||| ||||||||||||    
T  18670246 tttttaaacgacccctaattgcaaggattaaatacatatttaagcc 18670291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 32299087 - 32299132
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagc 46  Q
    ||||||||||||| |||||||||||||||||||| |||||||||||    
T  32299087 atttttaaacgactcctaattgcaaggatcaaatacatatttaagc 32299132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 28105547 - 28105499
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagccta 49  Q
    ||||||||||||||| ||||||||||||| |||| ||||||||||||||    
T  28105547 atttttaaacgacccttaattgcaaggatgaaatacatatttaagccta 28105499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 48788849 - 48788801
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagccta 49  Q
    |||||||||||||||||||||||||| || |||| ||||||||||||||    
T  48788849 atttttaaacgacccctaattgcaagaatgaaatacatatttaagccta 48788801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 2640224 - 2640177
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcct 48  Q
    |||||||||||||||||||||| |||||| |||| |||||||||||||    
T  2640224 atttttaaacgacccctaattgtaaggatgaaatacatatttaagcct 2640177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 10936176 - 10936223
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcct 48  Q
    |||||||||| |||||||||||||||||| |||| |||||||||||||    
T  10936176 atttttaaacaacccctaattgcaaggatgaaatacatatttaagcct 10936223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 29141558 - 29141605
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcct 48  Q
    |||||||||||||| |||||||||||||| |||| |||||||||||||    
T  29141558 atttttaaacgacctctaattgcaaggatgaaatacatatttaagcct 29141605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 37657219 - 37657270
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcctatat 52  Q
    |||||||||||| |||||||||||||||| |||| |||||||||||| ||||    
T  37657219 atttttaaacgatccctaattgcaaggatgaaatacatatttaagccaatat 37657270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 10935840 - 10935794
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcc 47  Q
    ||||||||||||||||||||||||||||| |||| || |||||||||    
T  10935840 atttttaaacgacccctaattgcaaggatgaaatacacatttaagcc 10935794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 13386129 - 13386175
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcc 47  Q
    |||||||||||||||||||||||||| || |||| ||||||||||||    
T  13386129 atttttaaacgacccctaattgcaagtattaaatacatatttaagcc 13386175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 40380066 - 40380112
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcc 47  Q
    ||||||||||||| ||||||||||||||| |||| ||||||||||||    
T  40380066 atttttaaacgactcctaattgcaaggatgaaatacatatttaagcc 40380112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 42362496 - 42362450
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcc 47  Q
    ||||||||||||| ||||||||||||||| |||| ||||||||||||    
T  42362496 atttttaaacgacacctaattgcaaggatgaaatacatatttaagcc 42362450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 42731465 - 42731419
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcc 47  Q
    ||||||||||||||||||||||||||||| | || ||||||||||||    
T  42731465 atttttaaacgacccctaattgcaaggatgagatacatatttaagcc 42731419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 17886872 - 17886921
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcctat 50  Q
    ||||||||| || |||||||||||||||| |||| |||||||||||||||    
T  17886872 atttttaaatgatccctaattgcaaggatgaaatacatatttaagcctat 17886921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 34799540 - 34799585
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagc 46  Q
    |||||||||||||||||| ||||| ||||||||| |||||||||||    
T  34799540 atttttaaacgacccctatttgcagggatcaaatacatatttaagc 34799585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 40379815 - 40379774
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatattt 42  Q
    ||||||||||||||||||||||||||||| |||| |||||||    
T  40379815 atttttaaacgacccctaattgcaaggatgaaatacatattt 40379774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 42019643 - 42019598
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagc 46  Q
    ||||||||||||||| ||||||||||||| |||| |||||||||||    
T  42019643 atttttaaacgacccttaattgcaaggatgaaatacatatttaagc 42019598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 19204840 - 19204884
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaag 45  Q
    |||||||||| ||||||||||| ||||||||||| ||||||||||    
T  19204840 atttttaaaccacccctaattgtaaggatcaaattcatatttaag 19204884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 20426712 - 20426760
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagccta 49  Q
    |||||||||||||| ||||||||| |||| |||| ||||||||||||||    
T  20426712 atttttaaacgacctctaattgcagggatgaaatacatatttaagccta 20426760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 24388865 - 24388821
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaag 45  Q
    ||||||||||||||| ||||||||||||| |||| ||||||||||    
T  24388865 atttttaaacgacccataattgcaaggatgaaatacatatttaag 24388821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 29144364 - 29144412
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagccta 49  Q
    |||||||||||||||||||||||| |||  |||| ||||||||||||||    
T  29144364 atttttaaacgacccctaattgcagggacgaaatacatatttaagccta 29144412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 27396675 - 27396628
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcct 48  Q
    ||||||||||| ||||||||| ||||||| |||| |||||||||||||    
T  27396675 atttttaaacggcccctaattacaaggatgaaatacatatttaagcct 27396628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 32053189 - 32053142
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcct 48  Q
    ||||||||||||||| ||||| ||||||| |||| |||||||||||||    
T  32053189 atttttaaacgacccataattacaaggatgaaatacatatttaagcct 32053142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 34793950 - 34793903
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcct 48  Q
    |||||||||||||||||| ||||| |||| |||| |||||||||||||    
T  34793950 atttttaaacgacccctatttgcagggataaaatacatatttaagcct 34793903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 42019979 - 42020022
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaa 44  Q
    |||||||||| |||||||||||||||||| |||| |||||||||    
T  42019979 atttttaaacaacccctaattgcaaggatgaaatacatatttaa 42020022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 4 - 46
Target Start/End: Original strand, 23181379 - 23181421
Alignment:
Q  4 tttaaacgacccctaattgcaaggatcaaatgcatatttaagc 46  Q
    |||||||||||||||||||||| ||| |||| |||||||||||    
T  23181379 tttaaacgacccctaattgcaatgatgaaatacatatttaagc 23181421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 43123221 - 43123175
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcc 47  Q
    |||||||||||||||||||||||| |||  |||| ||||||||||||    
T  43123221 atttttaaacgacccctaattgcagggacgaaatacatatttaagcc 43123175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 45; Significance: 3e-16; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 11163405 - 11163453
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagccta 49  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  11163405 atttttaaacgacccctaattgcaaggatcaaatacatatttaagccta 11163453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 16099406 - 16099453
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcct 48  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||    
T  16099406 atttttaaacgacccctaattgcaaggatcaaatacatatttaagcct 16099453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 39423897 - 39423946
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcctat 50  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||||||    
T  39423897 atttttaaacgacccctaattgcaaggatgaaatacatatttaagcctat 39423946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 6657924 - 6657876
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagccta 49  Q
    |||||||||||||||| ||||||||||||||||| ||||||||||||||    
T  6657924 atttttaaacgaccccaaattgcaaggatcaaatacatatttaagccta 6657876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 39498661 - 39498709
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagccta 49  Q
    |||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  39498661 atttttaaacgatccctaattgcaaggatcaaatacatatttaagccta 39498709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 44045384 - 44045432
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagccta 49  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  44045384 atttttaaacgacccctaattgcagggatcaaatacatatttaagccta 44045432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 3555296 - 3555249
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcct 48  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||||    
T  3555296 atttttaaacgacccctaattgcaaggatgaaatacatatttaagcct 3555249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 36755470 - 36755517
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcct 48  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||||    
T  36755470 atttttaaacgacccctaattgcaaggatgaaatacatatttaagcct 36755517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 45556158 - 45556111
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcct 48  Q
    |||||||||||| ||||||||||||||||||||| |||||||||||||    
T  45556158 atttttaaacgatccctaattgcaaggatcaaatacatatttaagcct 45556111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 45556429 - 45556476
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcct 48  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||||    
T  45556429 atttttaaacgacccctaattacaaggatcaaatacatatttaagcct 45556476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 6658229 - 6658275
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcc 47  Q
    |||||||||||||| ||||||||||||||||||| ||||||||||||    
T  6658229 atttttaaacgacctctaattgcaaggatcaaatacatatttaagcc 6658275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 25231230 - 25231280
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcctata 51  Q
    |||||||||||||||||||||||| |||| |||| ||||||||||||||||    
T  25231230 atttttaaacgacccctaattgcagggattaaatacatatttaagcctata 25231280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 15848470 - 15848518
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagccta 49  Q
    ||||||||||||||||||||||||||||| |||| | ||||||||||||    
T  15848470 atttttaaacgacccctaattgcaaggatgaaatacttatttaagccta 15848518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 2318892 - 2318939
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcct 48  Q
    |||||||||||||||||||||| |||||| |||| |||||||||||||    
T  2318892 atttttaaacgacccctaattggaaggatgaaatacatatttaagcct 2318939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 6588729 - 6588686
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaa 44  Q
    ||||||||||||||||||||||||||||| |||| |||||||||    
T  6588729 atttttaaacgacccctaattgcaaggatgaaatacatatttaa 6588686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 15848134 - 15848087
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcct 48  Q
    ||||||||||||||||||||||||||||| |||| ||||| |||||||    
T  15848134 atttttaaacgacccctaattgcaaggatgaaatacatatataagcct 15848087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 36382509 - 36382556
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcct 48  Q
    ||||||||||||||| ||||||||||||| |||| |||||||||||||    
T  36382509 atttttaaacgacccttaattgcaaggatgaaatacatatttaagcct 36382556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 37895393 - 37895346
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcct 48  Q
    ||||||||||||||| ||||||||||||| |||| |||||||||||||    
T  37895393 atttttaaacgacccttaattgcaaggatgaaatacatatttaagcct 37895346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 44044160 - 44044113
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcct 48  Q
    |||||||||| ||||||||||||| ||||||||| |||||||||||||    
T  44044160 atttttaaaccacccctaattgcagggatcaaatacatatttaagcct 44044113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 3556391 - 3556437
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcc 47  Q
    ||||||||||||||| ||||||||||||| ||||| |||||||||||    
T  3556391 atttttaaacgacccataattgcaaggatgaaatgtatatttaagcc 3556437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 9076449 - 9076495
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcc 47  Q
    |||||||||||||||||||||||||| || |||| ||||||||||||    
T  9076449 atttttaaacgacccctaattgcaagaataaaatacatatttaagcc 9076495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 10713105 - 10713151
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcc 47  Q
    ||||||||||||||| ||||||||||||| |||| ||||||||||||    
T  10713105 atttttaaacgacccttaattgcaaggatgaaatacatatttaagcc 10713151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 16099101 - 16099055
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcc 47  Q
    ||||||||| |||||||||||||||| ||||||| ||||||||||||    
T  16099101 atttttaaatgacccctaattgcaagaatcaaatacatatttaagcc 16099055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 25230148 - 25230102
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcc 47  Q
    |||||||||||||||||||||||| |||| |||| ||||||||||||    
T  25230148 atttttaaacgacccctaattgcagggattaaatacatatttaagcc 25230102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 34448177 - 34448225
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagccta 49  Q
    |||||||||| |||||||||||||||||| |||| ||| ||||||||||    
T  34448177 atttttaaacaacccctaattgcaaggatgaaatacatgtttaagccta 34448225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 36382207 - 36382159
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagccta 49  Q
    |||||||||||| |||||||||||||||| |||| |||| |||||||||    
T  36382207 atttttaaacgaaccctaattgcaaggatgaaatacatacttaagccta 36382159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 36480100 - 36480144
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaag 45  Q
    ||||||||||||||| ||||||||||||| |||| ||||||||||    
T  36480100 atttttaaacgacccttaattgcaaggatgaaatacatatttaag 36480144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 44714143 - 44714190
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagccta 49  Q
    ||||||||||||||||||||||||||||| |||  ||||||||||||||    
T  44714143 atttttaaacgacccctaattgcaaggatgaaa-acatatttaagccta 44714190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 30729667 - 30729616
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcctatat 52  Q
    |||||||||||||  |||||||||||||| |||| |||||||||||| ||||    
T  30729667 atttttaaacgacgtctaattgcaaggatgaaatacatatttaagccaatat 30729616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 34447859 - 34447812
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcct 48  Q
    ||||||||| ||||||||||| ||||||| |||| |||||||||||||    
T  34447859 atttttaaatgacccctaattacaaggatgaaatacatatttaagcct 34447812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 39498356 - 39498317
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatat 40  Q
    ||||||||||||||||||||| |||||||||||| |||||    
T  39498356 atttttaaacgacccctaattacaaggatcaaatacatat 39498317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 11163100 - 11163054
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcc 47  Q
    ||||||||||||||  ||||||||| |||||||| ||||||||||||    
T  11163100 atttttaaacgacctttaattgcaaagatcaaatacatatttaagcc 11163054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 37895730 - 37895772
Alignment:
Q  2 tttttaaacgacccctaattgcaaggatcaaatgcatatttaa 44  Q
    |||||||||||||| ||||||||||||| |||| |||||||||    
T  37895730 tttttaaacgacccataattgcaaggatgaaatacatatttaa 37895772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 13692602 - 13692635
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaat 34  Q
    ||||||||||||||||||||||||||||| ||||    
T  13692602 atttttaaacgacccctaattgcaaggatgaaat 13692635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 36479764 - 36479719
Alignment:
Q  1 atttttaaacgacccctaattgc-aaggatcaaatgcatatttaag 45  Q
    ||||||||||||||||||||||| |||||| |||| ||||||||||    
T  36479764 atttttaaacgacccctaattgcaaaggatgaaatacatatttaag 36479719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 10712769 - 10712725
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaag 45  Q
    |||||||||||| |||||||||||||||| |||| |||| |||||    
T  10712769 atttttaaacgaaccctaattgcaaggatgaaatacatacttaag 10712725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 2123 - 2170
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcct 48  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||    
T  2123 atttttaaacgacccctaattgcaaggatcaaatacatatttaagcct 2170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 1815 - 1765
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcctata 51  Q
    |||||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  1815 attttttaacgacccctaattgcaaggatcaaatacatatttaagcctata 1765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 62)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 25647930 - 25647883
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcct 48  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||    
T  25647930 atttttaaacgacccctaattgcaaggatcaaatacatatttaagcct 25647883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 26024774 - 26024820
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcc 47  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||    
T  26024774 atttttaaacgacccctaattgcaaggatcaaatacatatttaagcc 26024820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 19515865 - 19515816
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcctat 50  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||||||    
T  19515865 atttttaaacgacccctaattgcaaggatgaaatacatatttaagcctat 19515816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 36694328 - 36694279
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcctat 50  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||||||    
T  36694328 atttttaaacgacccctaattgcaaggatgaaatacatatttaagcctat 36694279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 36710429 - 36710380
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcctat 50  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||||||    
T  36710429 atttttaaacgacccctaattgcaaggatgaaatacatatttaagcctat 36710380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 47999474 - 47999523
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcctat 50  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||||||    
T  47999474 atttttaaacgacccctaattacaaggatcaaatacatatttaagcctat 47999523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 23209709 - 23209757
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagccta 49  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||||    
T  23209709 atttttaaacgacccctaattgcaaggatgaaatacatatttaagccta 23209757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 30711709 - 30711757
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagccta 49  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||||    
T  30711709 atttttaaacgacccctaattgcaaggatgaaatacatatttaagccta 30711757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 35473677 - 35473629
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagccta 49  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||||    
T  35473677 atttttaaacgacccctaattgcaaggattaaatacatatttaagccta 35473629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 43759204 - 43759252
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagccta 49  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||||    
T  43759204 atttttaaacgacccctaattgcaaggatgaaatacatatttaagccta 43759252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 17661898 - 17661851
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcct 48  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||||    
T  17661898 atttttaaacgacccctaattgcaaggatgaaatacatatttaagcct 17661851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 26024469 - 26024422
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcct 48  Q
    |||||||||||||||||||||||||| ||||||| |||||||||||||    
T  26024469 atttttaaacgacccctaattgcaagaatcaaatacatatttaagcct 26024422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 42533070 - 42533019
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcctatat 52  Q
    ||||||||||||||||||||||||||||| |||| ||||||||| |||||||    
T  42533070 atttttaaacgacccctaattgcaaggatgaaatacatatttaaacctatat 42533019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 183267 - 183221
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcc 47  Q
    |||||||||||||||||||||| ||||||||||| ||||||||||||    
T  183267 atttttaaacgacccctaattgtaaggatcaaatacatatttaagcc 183221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 6367608 - 6367562
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcc 47  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||    
T  6367608 atttttaaacgacccctaattgcaaggatgaaatacatatttaagcc 6367562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 24009621 - 24009575
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcc 47  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||    
T  24009621 atttttaaacgacccctaattgcaaggatgaaatacatatttaagcc 24009575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 34464495 - 34464449
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcc 47  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||    
T  34464495 atttttaaacgacccctaattgcaaggatgaaatacatatttaagcc 34464449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 34850447 - 34850493
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcc 47  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||    
T  34850447 atttttaaacgacccctaattgcaaggattaaatacatatttaagcc 34850493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 47999169 - 47999123
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcc 47  Q
    |||||||||||| ||||||||||||||||||||| ||||||||||||    
T  47999169 atttttaaacgatccctaattgcaaggatcaaatacatatttaagcc 47999123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 5734056 - 5734007
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcctat 50  Q
    ||||||||||||||||||||||||||||  |||| |||||||||||||||    
T  5734056 atttttaaacgacccctaattgcaaggacgaaatacatatttaagcctat 5734007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 35152712 - 35152757
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagc 46  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||    
T  35152712 atttttaaacgacccctaattgcaaggatgaaatacatatttaagc 35152757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 13914114 - 13914066
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagccta 49  Q
    ||||||||||||||||||||||||||||| |||| || |||||||||||    
T  13914114 atttttaaacgacccctaattgcaaggatgaaatacacatttaagccta 13914066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 34464831 - 34464879
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagccta 49  Q
    |||||||||| |||||||||||||||||| |||| ||||||||||||||    
T  34464831 atttttaaacaacccctaattgcaaggatgaaatacatatttaagccta 34464879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 35152389 - 35152341
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagccta 49  Q
    |||||||||||||| |||||||||||||| |||| ||||||||||||||    
T  35152389 atttttaaacgacctctaattgcaaggatgaaatacatatttaagccta 35152341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 37578238 - 37578190
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagccta 49  Q
    ||||||||||||||||||||||||||||| |||| ||||||||| ||||    
T  37578238 atttttaaacgacccctaattgcaaggatgaaatacatatttaaaccta 37578190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 41098779 - 41098731
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagccta 49  Q
    |||||||||||||||||||||||||| || |||| ||||||||||||||    
T  41098779 atttttaaacgacccctaattgcaagaatgaaatacatatttaagccta 41098731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 6367944 - 6367991
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcct 48  Q
    ||||||||||||||| ||||||||||||| |||| |||||||||||||    
T  6367944 atttttaaacgacccttaattgcaaggatgaaatacatatttaagcct 6367991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 17662232 - 17662279
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcct 48  Q
    |||||||||||||||| |||||||||||| |||| |||||||||||||    
T  17662232 atttttaaacgaccccaaattgcaaggatgaaatacatatttaagcct 17662279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 17692567 - 17692610
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaa 44  Q
    ||||||||||||||||||||||||||||| |||| |||||||||    
T  17692567 atttttaaacgacccctaattgcaaggatgaaatacatatttaa 17692610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 19017675 - 19017628
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcct 48  Q
    |||||||||| |||||||||||||||||| |||| |||||||||||||    
T  19017675 atttttaaacaacccctaattgcaaggatgaaatacatatttaagcct 19017628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 37578574 - 37578621
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcct 48  Q
    |||||||||||||||| |||||||||||| |||| |||||||||||||    
T  37578574 atttttaaacgacccccaattgcaaggatgaaatacatatttaagcct 37578621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 40435391 - 40435348
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaa 44  Q
    ||||||||||||||||||||||||||||| |||| |||||||||    
T  40435391 atttttaaacgacccctaattgcaaggatgaaatacatatttaa 40435348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 40772841 - 40772888
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcct 48  Q
    ||||| ||||||||||||||||||||||| |||| |||||||||||||    
T  40772841 attttcaaacgacccctaattgcaaggatgaaatacatatttaagcct 40772888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 6518178 - 6518224
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcc 47  Q
    ||||||||||||||||||||||||||||| ||||  |||||||||||    
T  6518178 atttttaaacgacccctaattgcaaggatgaaatatatatttaagcc 6518224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 30711373 - 30711327
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcc 47  Q
    |||||||||| |||||||||||||||||| |||| ||||||||||||    
T  30711373 atttttaaacaacccctaattgcaaggatgaaatacatatttaagcc 30711327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 34849057 - 34849011
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcc 47  Q
    ||||||||| ||||||||||||||||||| |||| ||||||||||||    
T  34849057 atttttaaaagacccctaattgcaaggattaaatacatatttaagcc 34849011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 36694630 - 36694680
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcctata 51  Q
    |||||||||| || ||||||||||||||| |||| ||||||||||||||||    
T  36694630 atttttaaacaacacctaattgcaaggatgaaatacatatttaagcctata 36694680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 36710731 - 36710781
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcctata 51  Q
    |||||||||| || ||||||||||||||| |||| ||||||||||||||||    
T  36710731 atttttaaacaacacctaattgcaaggatgaaatacatatttaagcctata 36710781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 40772553 - 40772507
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcc 47  Q
    ||||||||||||||| ||||||||||||| |||| ||||||||||||    
T  40772553 atttttaaacgacccataattgcaaggatgaaatacatatttaagcc 40772507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 46899107 - 46899061
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcc 47  Q
    |||||||||||||||||||||||| |||| |||| ||||||||||||    
T  46899107 atttttaaacgacccctaattgcatggatgaaatacatatttaagcc 46899061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 183573 - 183622
Alignment:
Q  1 atttttaaacgacccc-taattgcaaggatcaaatgcatatttaagccta 49  Q
    |||||||||||||||| ||||| |||||||||||| ||||||||||||||    
T  183573 atttttaaacgaccccctaattacaaggatcaaatacatatttaagccta 183622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 4960586 - 4960541
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagc 46  Q
    ||||||||||||||||||||||||| ||| |||| |||||||||||    
T  4960586 atttttaaacgacccctaattgcaatgatgaaatacatatttaagc 4960541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 19018011 - 19018059
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagccta 49  Q
    ||||||||||||||  ||||||||||||| |||| ||||||||||||||    
T  19018011 atttttaaacgacctgtaattgcaaggataaaatacatatttaagccta 19018059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 42248519 - 42248475
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaag 45  Q
    |||||||||||||| |||||||||||||| |||| ||||||||||    
T  42248519 atttttaaacgaccactaattgcaaggatgaaatacatatttaag 42248475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 51015679 - 51015631
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagccta 49  Q
    |||||||||||||||||| ||||| ||||||| | ||||||||||||||    
T  51015679 atttttaaacgacccctatttgcagggatcaattacatatttaagccta 51015631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 7231631 - 7231678
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcct 48  Q
    ||||||||||||| ||||||| ||||||| |||| |||||||||||||    
T  7231631 atttttaaacgactcctaattacaaggataaaatacatatttaagcct 7231678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 48
Target Start/End: Complemental strand, 7820996 - 7820953
Alignment:
Q  5 ttaaacgacccctaattgcaaggatcaaatgcatatttaagcct 48  Q
    ||||| ||||||||||||||||||| |||| |||||||||||||    
T  7820996 ttaaaggacccctaattgcaaggatgaaatacatatttaagcct 7820953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 7821335 - 7821382
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcct 48  Q
    ||||||||||||||  ||||||||| ||| ||||||||||||||||||    
T  7821335 atttttaaacgacctttaattgcaatgatgaaatgcatatttaagcct 7821382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 19322938 - 19322887
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcctatat 52  Q
    ||||||||||||||| |||||  |||||| |||| |||||||||||||||||    
T  19322938 atttttaaacgacccgtaattataaggatgaaatacatatttaagcctatat 19322887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 48779501 - 48779548
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcct 48  Q
    |||||||| |||| ||||||||||||||| |||| |||||||||||||    
T  48779501 atttttaagcgactcctaattgcaaggatgaaatacatatttaagcct 48779548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 49723108 - 49723147
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatat 40  Q
    ||||||||||||||||||||||||||||| |||| |||||    
T  49723108 atttttaaacgacccctaattgcaaggatgaaatacatat 49723147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 51019731 - 51019778
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcct 48  Q
    |||||||||||||||||| ||||| ||||||| | |||||||||||||    
T  51019731 atttttaaacgacccctatttgcagggatcaattacatatttaagcct 51019778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 26234432 - 26234478
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcc 47  Q
    |||||||| ||||||||| ||||| ||||||||| ||||||||||||    
T  26234432 atttttaagcgacccctatttgcagggatcaaatacatatttaagcc 26234478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 31197111 - 31197065
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcc 47  Q
    ||||||||| |||||||||||||| |||| |||| ||||||||||||    
T  31197111 atttttaaatgacccctaattgcagggatgaaatacatatttaagcc 31197065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 32917642 - 32917688
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcc 47  Q
    ||||||||||||||| |||||||||| || |||| ||||||||||||    
T  32917642 atttttaaacgacccttaattgcaagaatgaaatacatatttaagcc 32917688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 1841840 - 1841889
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcctat 50  Q
    ||||||||||||||||| ||| ||||||| |||| ||||||||| |||||    
T  1841840 atttttaaacgacccctcattacaaggatgaaatacatatttaaacctat 1841889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 13300286 - 13300331
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagc 46  Q
    ||||||||||||| ||||||||||| ||| |||| |||||||||||    
T  13300286 atttttaaacgacgcctaattgcaatgatgaaatacatatttaagc 13300331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 13914449 - 13914494
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagc 46  Q
    |||||||||| ||| |||||||||||||| |||| |||||||||||    
T  13914449 atttttaaacaacctctaattgcaaggatgaaatacatatttaagc 13914494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 14879017 - 14878984
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaat 34  Q
    ||||||||||||||||||||||||||||| ||||    
T  14879017 atttttaaacgacccctaattgcaaggataaaat 14878984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 44
Target Start/End: Complemental strand, 40210414 - 40210373
Alignment:
Q  3 ttttaaacgacccctaattgcaaggatcaaatgcatatttaa 44  Q
    |||||||||||| |||||||||||||| |||| |||||||||    
T  40210414 ttttaaacgaccactaattgcaaggatgaaatacatatttaa 40210373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 48692396 - 48692441
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagc 46  Q
    |||||||||||||| |||||| ||| |||||||| |||||||||||    
T  48692396 atttttaaacgacctctaattacaatgatcaaatacatatttaagc 48692441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 40210752 - 40210796
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaag 45  Q
    ||||||||||| ||||||||||||| ||| |||| ||||||||||    
T  40210752 atttttaaacggcccctaattgcaatgatgaaatacatatttaag 40210796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 139718 - 139670
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagccta 49  Q
    |||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  139718 atttttaaacgacccctaattgcaaggatcaaatacatatttaatccta 139670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 140023 - 140066
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaa 44  Q
    |||||||||| ||||||||||||||||||||||| |||||||||    
T  140023 atttttaaacaacccctaattgcaaggatcaaatacatatttaa 140066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0707 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0707
Description:

Target: scaffold0707; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 6461 - 6508
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcct 48  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||||    
T  6461 atttttaaacgacccctaattgcaaggatgaaatacatatttaagcct 6508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 39; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 14772 - 14818
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcc 47  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||    
T  14772 atttttaaacgacccctaattgcaaggatgaaattcatatttaagcc 14818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 14475 - 14427
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagccta 49  Q
    ||||||||||||| ||||||||||| ||| |||| ||||||||||||||    
T  14475 atttttaaacgactcctaattgcaatgatgaaatacatatttaagccta 14427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 37945 - 37992
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcct 48  Q
    ||||||||||||| ||||||||||||||| |||| |||||||||||||    
T  37945 atttttaaacgactcctaattgcaaggatgaaatacatatttaagcct 37992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 69011 - 68965
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcc 47  Q
    ||||||||| ||||||||||||||||||| |||| ||||||||||||    
T  69011 atttttaaatgacccctaattgcaaggatgaaatacatatttaagcc 68965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 69347 - 69393
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcc 47  Q
    |||||||||||||  |||||||||||||| |||| ||||||||||||    
T  69347 atttttaaacgacatctaattgcaaggatgaaatacatatttaagcc 69393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0775 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0775
Description:

Target: scaffold0775; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 5008 - 4959
Alignment:
Q  1 atttttaaacgacccctaattgcaaggatcaaatgcatatttaagcctat 50  Q
    |||||||||||||||||||||| | |||| |||| |||||||||||||||    
T  5008 atttttaaacgacccctaattgtagggatgaaatacatatttaagcctat 4959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University