View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5145_low_19 (Length: 272)
Name: NF5145_low_19
Description: NF5145
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5145_low_19 |
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Alignment Details
Target: chr5 (Bit Score: 236; Significance: 1e-130; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 2 - 256
Target Start/End: Original strand, 27781374 - 27781631
Alignment:
| Q |
2 |
agatgaatcaatagaggggtcagatgtagatgctagtgatgaacttgttagtgaaaccaacagcgagaccggagactctgcagtaaatgatgaatatga- |
100 |
Q |
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| T |
27781374 |
agatgaatcaatagaggggtcagatgtagatgctagtgatgaacttgttagtgaaaccaacagcgagaccggagactctgcagtcaacgatgaatatgat |
27781473 |
T |
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| Q |
101 |
--taaggttcgagtcttagttaagtcatgacaatttgatgacattatagcaaataagtttgtaagtgagcatattcatttatttctgttggactatattt |
198 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
27781474 |
gataaggttcgagtcttagttaagtcatgacaatttgatgacattatagcaaataagtttgtaagtgagcatattcatttatttctgttggactatattt |
27781573 |
T |
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| Q |
199 |
agtttatgaaaaagatcggaactcatgttttcatggaggaagaaatgtgtagttcaac |
256 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
27781574 |
agtttatgaaaaagatcggaactcatgttttcatggaggaagaaatgtgtagttcaac |
27781631 |
T |
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