View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5145_low_25 (Length: 249)
Name: NF5145_low_25
Description: NF5145
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5145_low_25 |
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Alignment Details
Target: chr3 (Bit Score: 162; Significance: 1e-86; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 65 - 230
Target Start/End: Original strand, 55300640 - 55300805
Alignment:
| Q |
65 |
actcatgattttgttgtctttttaagtccagaagatcaatcactcatggcaacagaaccagaagcaactttggaggaggcgatggtgttgatccatcccg |
164 |
Q |
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| T |
55300640 |
actcatgattttgttgtctttttaagtccagaagatcaatcactcatggtaacagaaccagaagcaactttggaggaggcgatggtgttgatccatcccg |
55300739 |
T |
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| Q |
165 |
atatccaagggaagcctttgagggttaacaatccgtcatcatcacaagcaactttggagaagatgg |
230 |
Q |
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| T |
55300740 |
atatccaagggaagcctttgagggttaacaatccgtcatcatcacaagcaactttggagaagatgg |
55300805 |
T |
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