View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5148-Insertion-7 (Length: 413)

Name: NF5148-Insertion-7
Description: NF5148
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5148-Insertion-7
NF5148-Insertion-7
[»] chr1 (18 HSPs)
chr1 (7-405)||(34780588-34780988)
chr1 (270-330)||(32729681-32729741)
chr1 (270-333)||(16539741-16539804)
chr1 (270-328)||(36155888-36155946)
chr1 (270-330)||(4621237-4621297)
chr1 (270-330)||(7578546-7578606)
chr1 (270-330)||(8254752-8254812)
chr1 (270-330)||(15059402-15059462)
chr1 (270-330)||(24122160-24122220)
chr1 (270-330)||(30677313-30677373)
chr1 (270-322)||(52135271-52135323)
chr1 (270-321)||(23041668-23041719)
chr1 (271-322)||(34778484-34778535)
chr1 (271-330)||(37351454-37351513)
chr1 (270-330)||(23734254-23734314)
chr1 (270-330)||(23741446-23741506)
chr1 (270-330)||(24674530-24674590)
chr1 (270-322)||(27159230-27159282)
[»] chr7 (26 HSPs)
chr7 (270-330)||(18044248-18044308)
chr7 (270-322)||(17279680-17279732)
chr7 (270-330)||(654705-654765)
chr7 (270-330)||(11997990-11998050)
chr7 (270-330)||(17196950-17197010)
chr7 (270-330)||(27312293-27312353)
chr7 (270-330)||(7275418-7275478)
chr7 (270-330)||(22120029-22120089)
chr7 (270-322)||(27009509-27009561)
chr7 (270-330)||(31712902-31712962)
chr7 (271-331)||(32849731-32849791)
chr7 (270-330)||(40542910-40542970)
chr7 (270-330)||(41907514-41907573)
chr7 (271-322)||(35476490-35476541)
chr7 (270-309)||(44933685-44933724)
chr7 (274-316)||(43785303-43785345)
chr7 (270-327)||(2751415-2751472)
chr7 (270-322)||(2344448-2344500)
chr7 (270-330)||(3851898-3851958)
chr7 (270-330)||(7175862-7175922)
chr7 (278-330)||(8943409-8943461)
chr7 (270-322)||(16374143-16374195)
chr7 (270-330)||(21835292-21835352)
chr7 (270-330)||(29861811-29861871)
chr7 (270-322)||(31197739-31197791)
chr7 (270-330)||(33137825-33137885)
[»] chr5 (28 HSPs)
chr5 (270-330)||(22392825-22392885)
chr5 (270-330)||(11926501-11926561)
chr5 (275-330)||(11464913-11464968)
chr5 (270-326)||(7151444-7151500)
chr5 (270-330)||(8484661-8484721)
chr5 (270-330)||(10869565-10869625)
chr5 (270-330)||(18207344-18207404)
chr5 (270-330)||(19145412-19145472)
chr5 (270-330)||(19456211-19456271)
chr5 (270-330)||(21377249-21377309)
chr5 (271-323)||(22648166-22648218)
chr5 (270-330)||(22693072-22693132)
chr5 (270-330)||(27498731-27498791)
chr5 (270-322)||(28614486-28614538)
chr5 (270-330)||(31287946-31288006)
chr5 (270-330)||(32059440-32059500)
chr5 (270-330)||(37495191-37495251)
chr5 (270-330)||(41351104-41351164)
chr5 (270-331)||(34310278-34310339)
chr5 (270-303)||(36895589-36895622)
chr5 (270-322)||(4603922-4603974)
chr5 (270-330)||(7085626-7085686)
chr5 (270-330)||(21236362-21236422)
chr5 (270-330)||(25750613-25750673)
chr5 (270-330)||(27487554-27487614)
chr5 (270-330)||(30485965-30486025)
chr5 (270-330)||(33709503-33709563)
chr5 (270-330)||(38630979-38631039)
[»] chr2 (22 HSPs)
chr2 (270-330)||(3943877-3943937)
chr2 (270-322)||(1845049-1845101)
chr2 (270-330)||(15038096-15038156)
chr2 (270-330)||(28669010-28669070)
chr2 (270-330)||(33827573-33827633)
chr2 (270-322)||(44929846-44929898)
chr2 (270-330)||(2140486-2140546)
chr2 (270-330)||(11941210-11941270)
chr2 (270-330)||(13266626-13266686)
chr2 (270-330)||(14486962-14487022)
chr2 (270-330)||(18692097-18692157)
chr2 (270-330)||(18976455-18976515)
chr2 (270-330)||(41329979-41330039)
chr2 (270-330)||(44946053-44946113)
chr2 (270-321)||(14946924-14946975)
chr2 (270-316)||(6714295-6714341)
chr2 (270-330)||(8192352-8192412)
chr2 (270-330)||(13089017-13089077)
chr2 (270-330)||(24196139-24196199)
chr2 (270-330)||(25293296-25293356)
chr2 (270-330)||(34516414-34516474)
chr2 (270-330)||(35171937-35171997)
[»] chr3 (27 HSPs)
chr3 (270-332)||(32094757-32094819)
chr3 (270-330)||(15566500-15566560)
chr3 (270-330)||(40133449-40133509)
chr3 (270-332)||(52821636-52821698)
chr3 (270-327)||(33698706-33698763)
chr3 (270-330)||(8097279-8097339)
chr3 (270-330)||(24407398-24407458)
chr3 (270-330)||(26174250-26174310)
chr3 (270-330)||(32151561-32151621)
chr3 (270-330)||(39041852-39041912)
chr3 (270-330)||(46576485-46576545)
chr3 (270-330)||(48977525-48977585)
chr3 (270-330)||(49258262-49258322)
chr3 (270-330)||(50731237-50731297)
chr3 (270-330)||(50781557-50781617)
chr3 (270-330)||(53848434-53848494)
chr3 (270-330)||(54475818-54475878)
chr3 (270-316)||(6041670-6041716)
chr3 (270-322)||(10083819-10083871)
chr3 (270-322)||(10190742-10190794)
chr3 (270-330)||(17579135-17579195)
chr3 (270-330)||(24165715-24165775)
chr3 (270-330)||(25289715-25289774)
chr3 (270-330)||(30257761-30257821)
chr3 (270-330)||(33398468-33398528)
chr3 (270-322)||(53424177-53424229)
chr3 (270-322)||(55287930-55287982)
[»] chr8 (28 HSPs)
chr8 (277-330)||(36848757-36848810)
chr8 (270-330)||(34610687-34610747)
chr8 (270-330)||(2166837-2166897)
chr8 (270-330)||(2639411-2639471)
chr8 (270-330)||(4718786-4718846)
chr8 (270-330)||(8765526-8765586)
chr8 (270-330)||(14633095-14633155)
chr8 (270-330)||(18128654-18128714)
chr8 (270-330)||(20306049-20306109)
chr8 (270-330)||(21092682-21092742)
chr8 (270-330)||(21603371-21603431)
chr8 (270-330)||(24018524-24018584)
chr8 (271-322)||(7557952-7558003)
chr8 (270-321)||(9047279-9047329)
chr8 (271-330)||(15259407-15259466)
chr8 (271-330)||(28193615-28193674)
chr8 (270-316)||(42328159-42328205)
chr8 (270-330)||(2618327-2618387)
chr8 (270-330)||(16990724-16990784)
chr8 (270-330)||(19471751-19471811)
chr8 (270-330)||(19542675-19542735)
chr8 (270-330)||(19589961-19590021)
chr8 (270-302)||(20470085-20470117)
chr8 (270-330)||(20505693-20505753)
chr8 (270-330)||(25248488-25248547)
chr8 (270-330)||(32879420-32879480)
chr8 (270-322)||(34237655-34237707)
chr8 (270-330)||(42643118-42643178)
[»] chr4 (24 HSPs)
chr4 (270-330)||(52494625-52494685)
chr4 (270-327)||(55158343-55158400)
chr4 (270-330)||(34723936-34723996)
chr4 (270-330)||(34844758-34844818)
chr4 (270-330)||(40058852-40058912)
chr4 (270-330)||(44343651-44343711)
chr4 (270-322)||(45787704-45787756)
chr4 (271-330)||(52983756-52983815)
chr4 (270-332)||(7093506-7093568)
chr4 (270-316)||(13771482-13771528)
chr4 (270-327)||(22488028-22488085)
chr4 (270-327)||(53787057-53787114)
chr4 (270-330)||(4064997-4065057)
chr4 (270-330)||(19660532-19660592)
chr4 (270-330)||(20566487-20566547)
chr4 (270-330)||(23131436-23131496)
chr4 (270-322)||(23639769-23639821)
chr4 (270-322)||(23645427-23645479)
chr4 (270-330)||(27528795-27528855)
chr4 (270-330)||(32986334-32986394)
chr4 (270-322)||(35229313-35229365)
chr4 (270-322)||(47464108-47464160)
chr4 (270-330)||(51535758-51535818)
chr4 (270-330)||(54127342-54127402)
[»] scaffold0049 (1 HSPs)
scaffold0049 (270-330)||(66891-66951)
[»] scaffold0026 (1 HSPs)
scaffold0026 (270-330)||(97366-97426)
[»] chr6 (12 HSPs)
chr6 (270-330)||(654146-654206)
chr6 (270-322)||(1345080-1345132)
chr6 (270-330)||(3222636-3222696)
chr6 (270-330)||(5360071-5360131)
chr6 (270-330)||(14213019-14213079)
chr6 (270-330)||(34147483-34147543)
chr6 (270-330)||(34160099-34160159)
chr6 (271-330)||(9239112-9239171)
chr6 (270-331)||(11841036-11841097)
chr6 (270-327)||(15360098-15360155)
chr6 (270-330)||(21148511-21148571)
chr6 (270-330)||(28672204-28672264)
[»] scaffold0576 (1 HSPs)
scaffold0576 (270-327)||(5082-5139)
[»] scaffold0200 (1 HSPs)
scaffold0200 (277-322)||(26609-26654)
[»] scaffold0217 (1 HSPs)
scaffold0217 (270-330)||(7309-7369)
[»] scaffold0102 (1 HSPs)
scaffold0102 (270-330)||(39229-39289)
[»] scaffold0019 (1 HSPs)
scaffold0019 (270-330)||(161946-162006)
[»] scaffold0016 (1 HSPs)
scaffold0016 (270-330)||(32425-32484)


Alignment Details
Target: chr1 (Bit Score: 281; Significance: 1e-157; HSPs: 18)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 7 - 405
Target Start/End: Original strand, 34780588 - 34780988
Alignment:
Q  7 aaaaacaaattaaaccttcacttcttattgttcttgaatttagacaccgaatttgtgcatgatgtgatgtatgtggtaaactttactttcaaacctatct 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34780588 aaaaacaaattaaaccttcacttcttattgttcttgaatttagacaccgaatttgtgcatgatgtgatgtatgtggtaaactttactttcaaacctatct 34780687  T
Q  107 atctatcttctagtgctccatattctatggtcctcatgatagaaatataatttccataatcatcatctcaaaatggtgtgtgtaattttttaccaaccta 206  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| ||||||||||||||||||    
T  34780688 atctatcttctagtgctccatattctatggtcctcatgatagaaatataatttccacaatcatcatcttaaaatggtgtgtataattttttaccaaccta 34780787  T
Q  207 gcatttttatgaagaaacagcaaataaaaccaaccgagtacataaaa--tgtgannnnnnnnnnnaaaactcggtatccgatccaaaaaccgactaattt 304  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||  ||||            |||| |||||||  |||| ||||| ||| |||||     
T  34780788 gcatttttatgaagaaacagcaaataaaaccaaccgagtgcataaaatgtgtgttttttttaaaaaaaattcggtatttgatctaaaaatcgattaattc 34780887  T
Q  305 aaggggaccaattccaccacccacttacataaatatgtattaacttattccaacggtttggtctagtaataaaaagataggtcctaaccattaaaattct 404  Q
    || |||| |||||||||| ||| |||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| |||||||    
T  34780888 aaagggatcaattccaccgcccgcttacataaatatgtattaacttattccaacgatttggtctagtgataaaaagataggtcctaaccattgaaattct 34780987  T
Q  405 g 405  Q
    |    
T  34780988 g 34780988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 270 - 330
Target Start/End: Complemental strand, 32729741 - 32729681
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    |||||||||||||||||||||| ||||||||||  ||||||| |||| ||||| |||||||    
T  32729741 aaaactcggtatccgatccaaagaccgactaatccaaggggatcaatcccaccgcccactt 32729681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 270 - 333
Target Start/End: Complemental strand, 16539804 - 16539741
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccacttaca 333  Q
    |||| |||||||||||| |||  | |||||||||| ||||||||||| ||||||||||||||||    
T  16539804 aaaattcggtatccgatacaagtatcgactaatttgaggggaccaatcccaccacccacttaca 16539741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 270 - 328
Target Start/End: Original strand, 36155888 - 36155946
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccac 328  Q
    ||||||||||||||||||||| || |||||||||| | ||||||||| ||||| |||||    
T  36155888 aaaactcggtatccgatccaagaatcgactaatttgaagggaccaatcccaccgcccac 36155946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 330
Target Start/End: Original strand, 4621237 - 4621297
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    ||||||||||||||||||||| || ||||||||   ||||||||||| ||||| |||||||    
T  4621237 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccactt 4621297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 330
Target Start/End: Complemental strand, 7578606 - 7578546
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    |||||||||||||||||||||||| | ||||||   |||| |||||| |||||||||||||    
T  7578606 aaaactcggtatccgatccaaaaatcaactaatccgagggaaccaatcccaccacccactt 7578546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 330
Target Start/End: Original strand, 8254752 - 8254812
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    ||||||||||||||||| ||| || ||||||||| ||||||| |||| ||||| |||||||    
T  8254752 aaaactcggtatccgattcaagaatcgactaattcaaggggatcaatcccaccgcccactt 8254812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 330
Target Start/End: Original strand, 15059402 - 15059462
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    ||||||||||||||||||||| || |||||||||  |||||||||||  |||| |||||||    
T  15059402 aaaactcggtatccgatccaagaatcgactaattcgaggggaccaatctcaccgcccactt 15059462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 330
Target Start/End: Complemental strand, 24122220 - 24122160
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    ||||||||||||||||||||| || ||||||||   ||||||||||| ||||| |||||||    
T  24122220 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccactt 24122160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 330
Target Start/End: Complemental strand, 30677373 - 30677313
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    |||||||| |||||| ||||| ||||||||||| | ||||||||||| ||||| |||||||    
T  30677373 aaaactcgatatccggtccaagaaccgactaatctgaggggaccaatcccaccgcccactt 30677313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 322
Target Start/End: Complemental strand, 52135323 - 52135271
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccacc 322  Q
    ||||||| ||||||||||||| ||||||||||| | ||||||||||| |||||    
T  52135323 aaaactcagtatccgatccaagaaccgactaatatgaggggaccaatcccacc 52135271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 270 - 321
Target Start/End: Complemental strand, 23041719 - 23041668
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccac 321  Q
    ||||||||||||||||||||| || |||||||||  ||||||||||| ||||    
T  23041719 aaaactcggtatccgatccaagaatcgactaattcgaggggaccaatcccac 23041668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 271 - 322
Target Start/End: Complemental strand, 34778535 - 34778484
Alignment:
Q  271 aaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccacc 322  Q
    |||||||||||||||||||| || ||||||||  |||||||||||| |||||    
T  34778535 aaactcggtatccgatccaagaatcgactaatccaaggggaccaatcccacc 34778484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 271 - 330
Target Start/End: Original strand, 37351454 - 37351513
Alignment:
Q  271 aaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    ||||||||||||||||||||  ||||||||||   ||||||||||| ||||| |||||||    
T  37351454 aaactcggtatccgatccaaggaccgactaatccgaggggaccaatcccaccgcccactt 37351513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 330
Target Start/End: Complemental strand, 23734314 - 23734254
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    |||||| |||||||||| ||| || |||||||| | |||||||||||| |||| |||||||    
T  23734314 aaaacttggtatccgattcaagaatcgactaatctgaggggaccaatttcaccgcccactt 23734254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 330
Target Start/End: Complemental strand, 23741506 - 23741446
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    |||||| |||||||||| ||| || |||||||| | |||||||||||| |||| |||||||    
T  23741506 aaaacttggtatccgattcaagaatcgactaatctgaggggaccaatttcaccgcccactt 23741446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 330
Target Start/End: Complemental strand, 24674590 - 24674530
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    |||| |||||||||||||||| || ||||||||   ||||||||||| ||||| |||||||    
T  24674590 aaaattcggtatccgatccaagaatcgactaatacgaggggaccaatcccaccgcccactt 24674530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 322
Target Start/End: Complemental strand, 27159282 - 27159230
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccacc 322  Q
    |||||||| ||||||||||||| | |||||||| | ||||||||||| |||||    
T  27159282 aaaactcgatatccgatccaaagatcgactaatctgaggggaccaatcccacc 27159230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 45; Significance: 2e-16; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 270 - 330
Target Start/End: Complemental strand, 18044308 - 18044248
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    ||||||||||||||||||||| || |||||||| | |||||||||||||||||||||||||    
T  18044308 aaaactcggtatccgatccaagaatcgactaatctgaggggaccaattccaccacccactt 18044248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 270 - 322
Target Start/End: Complemental strand, 17279732 - 17279680
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccacc 322  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||| |||||    
T  17279732 aaaactcggtatccgatccaaagaccgactaatttgaggggaccaatcccacc 17279680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 270 - 330
Target Start/End: Original strand, 654705 - 654765
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    ||||||||||||||||||||| |||||||||||   ||||||||||| ||||| |||||||    
T  654705 aaaactcggtatccgatccaagaaccgactaatccgaggggaccaatcccaccgcccactt 654765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 270 - 330
Target Start/End: Complemental strand, 11998050 - 11997990
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    ||||||||||||||||||||| || |||||||||  ||||||||||| ||||| |||||||    
T  11998050 aaaactcggtatccgatccaagaatcgactaattcgaggggaccaatcccaccgcccactt 11997990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 270 - 330
Target Start/End: Original strand, 17196950 - 17197010
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    ||||||||||||||||||||| || |||||||||  ||||||||||| ||||| |||||||    
T  17196950 aaaactcggtatccgatccaagaatcgactaattcgaggggaccaatcccaccgcccactt 17197010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 270 - 330
Target Start/End: Complemental strand, 27312353 - 27312293
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    ||||||||||||||||||||| || |||||||| | ||||||||||| ||||| |||||||    
T  27312353 aaaactcggtatccgatccaagaatcgactaatctgaggggaccaatcccaccgcccactt 27312293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 330
Target Start/End: Complemental strand, 7275478 - 7275418
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    ||||||||||||||||||||| || ||||||||   ||||||||||| ||||| |||||||    
T  7275478 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccactt 7275418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 330
Target Start/End: Complemental strand, 22120089 - 22120029
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    ||||||||||||||||||||| || ||||||||   ||||||||||| ||||| |||||||    
T  22120089 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccactt 22120029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 322
Target Start/End: Complemental strand, 27009561 - 27009509
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccacc 322  Q
    |||||||||||||| |||||| || |||||||||| ||||||||||| |||||    
T  27009561 aaaactcggtatccaatccaagaatcgactaatttgaggggaccaatcccacc 27009509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 330
Target Start/End: Original strand, 31712902 - 31712962
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    ||||||||||||||||||||| || ||||||||   ||||||||||| ||||| |||||||    
T  31712902 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccactt 31712962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 271 - 331
Target Start/End: Complemental strand, 32849791 - 32849731
Alignment:
Q  271 aaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactta 331  Q
    |||||||||||||||||||| || |||||||| | ||||||||||| ||||  ||||||||    
T  32849791 aaactcggtatccgatccaagaatcgactaatctgaggggaccaatcccactgcccactta 32849731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 330
Target Start/End: Original strand, 40542910 - 40542970
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    ||||||||||||||||||||| || ||||||||   ||||||||||| ||||| |||||||    
T  40542910 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccactt 40542970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 330
Target Start/End: Original strand, 41907514 - 41907573
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    ||||||||||||||||||||| || |||||||| |  |||||||||| |||||||||||||    
T  41907514 aaaactcggtatccgatccaagaatcgactaatct-gggggaccaatcccaccacccactt 41907573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 271 - 322
Target Start/End: Complemental strand, 35476541 - 35476490
Alignment:
Q  271 aaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccacc 322  Q
    ||||||||||||||||| ||| ||||||||||  |||| |||||||||||||    
T  35476541 aaactcggtatccgatctaaagaccgactaatccaaggagaccaattccacc 35476490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 270 - 309
Target Start/End: Complemental strand, 44933724 - 44933685
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggg 309  Q
    |||||||||||||||||||||||| | |||||||||||||    
T  44933724 aaaactcggtatccgatccaaaaatcaactaatttaaggg 44933685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 274 - 316
Target Start/End: Original strand, 43785303 - 43785345
Alignment:
Q  274 ctcggtatccgatccaaaaaccgactaatttaaggggaccaat 316  Q
    |||||||||||||||||||| ||||||||  ||||||||||||    
T  43785303 ctcggtatccgatccaaaaatcgactaatccaaggggaccaat 43785345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 327
Target Start/End: Complemental strand, 2751472 - 2751415
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccaccca 327  Q
    ||||||||||||||||||||| || ||||||||   ||||||||||| ||||| ||||    
T  2751472 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgccca 2751415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 322
Target Start/End: Complemental strand, 2344500 - 2344448
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccacc 322  Q
    |||||||||||||||||||||  ||||||||||   ||||||||||| |||||    
T  2344500 aaaactcggtatccgatccaaggaccgactaatccgaggggaccaatcccacc 2344448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 330
Target Start/End: Complemental strand, 3851958 - 3851898
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    ||||||||||||||||||||| || ||||||||   |||||| |||| ||||| |||||||    
T  3851958 aaaactcggtatccgatccaagaatcgactaatccgaggggatcaatcccaccgcccactt 3851898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 330
Target Start/End: Original strand, 7175862 - 7175922
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    ||||||| ||||||||||||| || ||||||||   ||||||||||| ||||| |||||||    
T  7175862 aaaactcagtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccactt 7175922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 278 - 330
Target Start/End: Original strand, 8943409 - 8943461
Alignment:
Q  278 gtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    ||||||||||||| || ||||||||| ||||||||||||  |||| |||||||    
T  8943409 gtatccgatccaagaatcgactaattcaaggggaccaatcacaccgcccactt 8943461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 322
Target Start/End: Complemental strand, 16374195 - 16374143
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccacc 322  Q
    ||||||||||||||||||||| || ||||||||   ||||||||||| |||||    
T  16374195 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccacc 16374143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 330
Target Start/End: Complemental strand, 21835352 - 21835292
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    |||||||| |||||||||||| || ||||||||   ||||||||||| ||||| |||||||    
T  21835352 aaaactcgatatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccactt 21835292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 330
Target Start/End: Complemental strand, 29861871 - 29861811
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    |||||||||||||||||| || || |||||||||  |||||| |||| ||||| |||||||    
T  29861871 aaaactcggtatccgatctaagaatcgactaattcgaggggatcaatcccaccgcccactt 29861811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 322
Target Start/End: Complemental strand, 31197791 - 31197739
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccacc 322  Q
    |||||||| |||||||||||| || |||||||| | ||||||||||| |||||    
T  31197791 aaaactcgatatccgatccaagaatcgactaatctgaggggaccaatcccacc 31197739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 330
Target Start/End: Original strand, 33137825 - 33137885
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    |||||||| ||||||||| || || |||||||||  |||||||||||| |||| |||||||    
T  33137825 aaaactcgatatccgatctaagaatcgactaattcgaggggaccaatttcaccgcccactt 33137885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 2e-16; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 270 - 330
Target Start/End: Complemental strand, 22392885 - 22392825
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    |||||||||||||||||||||||| |||||||| | ||||||||||||||||| |||||||    
T  22392885 aaaactcggtatccgatccaaaaatcgactaatctgaggggaccaattccaccgcccactt 22392825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 270 - 330
Target Start/End: Original strand, 11926501 - 11926561
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    ||||||||||||||||||||| || ||||||||   ||||||||||| |||||||||||||    
T  11926501 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccacccactt 11926561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 275 - 330
Target Start/End: Original strand, 11464913 - 11464968
Alignment:
Q  275 tcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    |||||||||||||||| || |||||||||  ||||||||||| |||||||||||||    
T  11464913 tcggtatccgatccaagaatcgactaattcgaggggaccaatcccaccacccactt 11464968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 326
Target Start/End: Complemental strand, 7151500 - 7151444
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccaccc 326  Q
    ||||||||||||||||||||| || |||||||||  |||||||||||| || |||||    
T  7151500 aaaactcggtatccgatccaagaatcgactaattctaggggaccaatttcatcaccc 7151444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 330
Target Start/End: Original strand, 8484661 - 8484721
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    ||||||||||||||||||||| || ||||||||   ||||||||||| ||||| |||||||    
T  8484661 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccactt 8484721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 330
Target Start/End: Original strand, 10869565 - 10869625
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    |||||| |||||||||||||| |||||||||||   ||||||||||| ||||| |||||||    
T  10869565 aaaacttggtatccgatccaagaaccgactaatccgaggggaccaatcccaccgcccactt 10869625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 330
Target Start/End: Complemental strand, 18207404 - 18207344
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    ||||||||||||||||||||| || ||||||||   ||||||||||| ||||| |||||||    
T  18207404 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccactt 18207344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 330
Target Start/End: Original strand, 19145412 - 19145472
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    ||||||||||||||||||||| |||| ||||||   ||||||||||| ||||| |||||||    
T  19145412 aaaactcggtatccgatccaagaaccaactaatccgaggggaccaatcccaccgcccactt 19145472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 330
Target Start/End: Original strand, 19456211 - 19456271
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    ||||||||||||||||||||| || ||||||||   ||||||||||| ||||| |||||||    
T  19456211 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccactt 19456271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 330
Target Start/End: Original strand, 21377249 - 21377309
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    |||||||||||||||||||||| ||||||||||  || | |||||||  ||||||||||||    
T  21377249 aaaactcggtatccgatccaaagaccgactaatccaaagagaccaatctcaccacccactt 21377309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 271 - 323
Target Start/End: Complemental strand, 22648218 - 22648166
Alignment:
Q  271 aaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccacca 323  Q
    ||||||||||||||||||||| |||||||||| | |||||| |||| ||||||    
T  22648218 aaactcggtatccgatccaaagaccgactaatctgaggggatcaatcccacca 22648166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 330
Target Start/End: Complemental strand, 22693132 - 22693072
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    ||||||||||||||||||||| || ||||||||   ||||||||||| ||||| |||||||    
T  22693132 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccactt 22693072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 330
Target Start/End: Original strand, 27498731 - 27498791
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    ||||||||||||||||||||| || ||||||||   ||||||||||| ||||| |||||||    
T  27498731 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccactt 27498791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 322
Target Start/End: Original strand, 28614486 - 28614538
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccacc 322  Q
    |||||||||||||||||||||||| |||||||||  |||||| |||| |||||    
T  28614486 aaaactcggtatccgatccaaaaatcgactaattcgaggggatcaatcccacc 28614538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 330
Target Start/End: Original strand, 31287946 - 31288006
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    ||||||||||||||| ||||| ||||||||||||  ||| ||||||| ||||| |||||||    
T  31287946 aaaactcggtatccggtccaagaaccgactaattcgaggagaccaatcccaccgcccactt 31288006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 330
Target Start/End: Original strand, 32059440 - 32059500
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    |||||||||||||||||||||  ||||||||||   ||||||||||| ||||| |||||||    
T  32059440 aaaactcggtatccgatccaaggaccgactaatccgaggggaccaatcccaccgcccactt 32059500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 330
Target Start/End: Complemental strand, 37495251 - 37495191
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    ||||||||||||||||||||| || ||||||||   ||||||||||| ||||| |||||||    
T  37495251 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccactt 37495191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 330
Target Start/End: Original strand, 41351104 - 41351164
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    ||||||||||||||||||||| || ||||||||   ||||||||||| ||||| |||||||    
T  41351104 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccactt 41351164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 331
Target Start/End: Complemental strand, 34310339 - 34310278
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactta 331  Q
    ||||||||||||||||||||| || ||| |||||  ||||||||||| |||||  |||||||    
T  34310339 aaaactcggtatccgatccaagaatcgattaattcgaggggaccaatcccaccgtccactta 34310278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 303
Target Start/End: Complemental strand, 36895622 - 36895589
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatt 303  Q
    ||||||||||||||||||||| ||||||||||||    
T  36895622 aaaactcggtatccgatccaagaaccgactaatt 36895589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 322
Target Start/End: Complemental strand, 4603974 - 4603922
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccacc 322  Q
    |||||||||||||||||||||  ||||||||||   ||||||||||| |||||    
T  4603974 aaaactcggtatccgatccaaggaccgactaatccgaggggaccaatcccacc 4603922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 330
Target Start/End: Original strand, 7085626 - 7085686
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    ||||||||||||||||| ||| || ||||||||   ||||||||||| ||||| |||||||    
T  7085626 aaaactcggtatccgattcaagaatcgactaatccgaggggaccaatcccaccgcccactt 7085686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 330
Target Start/End: Original strand, 21236362 - 21236422
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    ||||||||||||||||| ||| || |||||||| | ||||||| ||| ||||| |||||||    
T  21236362 aaaactcggtatccgattcaagaatcgactaatctgaggggactaatcccaccgcccactt 21236422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 330
Target Start/End: Original strand, 25750613 - 25750673
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    ||||||||||||||||||||| || |||||||| | | |||||||||  |||| |||||||    
T  25750613 aaaactcggtatccgatccaagaatcgactaatctgaagggaccaatctcaccccccactt 25750673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 330
Target Start/End: Original strand, 27487554 - 27487614
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    ||||||| ||||||||||||| || ||||||||   ||||||||||| ||||| |||||||    
T  27487554 aaaactctgtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccactt 27487614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 330
Target Start/End: Complemental strand, 30486025 - 30485965
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    ||||||||||||||||||||| ||  |||||||   ||||||||||| ||||| |||||||    
T  30486025 aaaactcggtatccgatccaagaattgactaatccgaggggaccaatcccaccgcccactt 30485965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 330
Target Start/End: Original strand, 33709503 - 33709563
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    ||||| ||||||||||||||| || ||||||||   ||||||||||| ||||| |||||||    
T  33709503 aaaacacggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccactt 33709563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 330
Target Start/End: Original strand, 38630979 - 38631039
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    ||||||||||||||||||||| || ||| ||||   ||||||||||| ||||| |||||||    
T  38630979 aaaactcggtatccgatccaagaatcgattaatccgaggggaccaatcccaccgcccactt 38631039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 270 - 330
Target Start/End: Complemental strand, 3943937 - 3943877
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    |||||| |||||||||||||| |||||||||||  |||||||||||| |||||||||||||    
T  3943937 aaaacttggtatccgatccaataaccgactaatccaaggggaccaatcccaccacccactt 3943877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 270 - 322
Target Start/End: Original strand, 1845049 - 1845101
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccacc 322  Q
    |||||||||||||||| |||| || |||||||||| |||||||||||||||||    
T  1845049 aaaactcggtatccgagccaagaatcgactaatttgaggggaccaattccacc 1845101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 270 - 330
Target Start/End: Complemental strand, 15038156 - 15038096
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    ||||||||||||||||||||| || |||||||| | ||||||||||| ||||| |||||||    
T  15038156 aaaactcggtatccgatccaagaatcgactaatctgaggggaccaatcccaccgcccactt 15038096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 270 - 330
Target Start/End: Complemental strand, 28669070 - 28669010
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    |||||||||||||||||||||||| ||||||||   ||||||||||| ||||| |||||||    
T  28669070 aaaactcggtatccgatccaaaaatcgactaatccgaggggaccaatcccaccgcccactt 28669010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 270 - 330
Target Start/End: Original strand, 33827573 - 33827633
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    ||||||||||||||||||||| || ||||||||  |||||||||||| ||||| |||||||    
T  33827573 aaaactcggtatccgatccaagaatcgactaatccaaggggaccaatcccaccgcccactt 33827633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 270 - 322
Target Start/End: Original strand, 44929846 - 44929898
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccacc 322  Q
    ||||||||||||||||||||| || ||||||||| |||||||||||| |||||    
T  44929846 aaaactcggtatccgatccaagaatcgactaattcaaggggaccaatcccacc 44929898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 330
Target Start/End: Original strand, 2140486 - 2140546
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    ||||||||||||||||||||| || ||||||||   ||||||||||| ||||| |||||||    
T  2140486 aaaactcggtatccgatccaataatcgactaatccgaggggaccaatcccaccgcccactt 2140546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 330
Target Start/End: Original strand, 11941210 - 11941270
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    ||||||||||||||||||||| || ||||||||   ||||||||||| ||||| |||||||    
T  11941210 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccactt 11941270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 330
Target Start/End: Complemental strand, 13266686 - 13266626
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    |||||||| |||||||||||| || |||||||||| ||||||||||| |||  ||||||||    
T  13266686 aaaactcgatatccgatccaagaatcgactaatttgaggggaccaatcccattacccactt 13266626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 330
Target Start/End: Complemental strand, 14487022 - 14486962
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    |||||||||||||||||||||  ||||||||||   ||||||||||| ||||| |||||||    
T  14487022 aaaactcggtatccgatccaaggaccgactaatccgaggggaccaatcccaccgcccactt 14486962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 330
Target Start/End: Complemental strand, 18692157 - 18692097
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    ||||||||||||||||||||| || ||||||||   ||||||||||| ||||| |||||||    
T  18692157 aaaactcggtatccgatccaagaatcgactaatacgaggggaccaatcccaccgcccactt 18692097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 330
Target Start/End: Original strand, 18976455 - 18976515
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    |||| |||||||||||||||| || |||||||||  ||||||||||| ||||| |||||||    
T  18976455 aaaattcggtatccgatccaagaatcgactaattcgaggggaccaatcccaccgcccactt 18976515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 330
Target Start/End: Complemental strand, 41330039 - 41329979
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    ||||||||||||||| ||||| ||||||||||| | |||||||||||  |||| |||||||    
T  41330039 aaaactcggtatccggtccaagaaccgactaatctgaggggaccaatctcaccgcccactt 41329979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 330
Target Start/End: Original strand, 44946053 - 44946113
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    ||||||||||||||||||||| || ||||||||   ||||||||||| ||||| |||||||    
T  44946053 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccactt 44946113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 270 - 321
Target Start/End: Complemental strand, 14946975 - 14946924
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccac 321  Q
    |||||||||| |||||||||||||| ||||||| | ||||||||||| ||||    
T  14946975 aaaactcggtctccgatccaaaaactgactaatctgaggggaccaatcccac 14946924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 270 - 316
Target Start/End: Original strand, 6714295 - 6714341
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaat 316  Q
    |||||||||||||| |||||| || |||||||||| |||||||||||    
T  6714295 aaaactcggtatccaatccaagaatcgactaatttgaggggaccaat 6714341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 330
Target Start/End: Original strand, 8192352 - 8192412
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    |||||||||||||||||||||  ||||||||||   ||||| ||||| ||||| |||||||    
T  8192352 aaaactcggtatccgatccaaggaccgactaatccgaggggcccaatcccaccgcccactt 8192412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 330
Target Start/End: Complemental strand, 13089077 - 13089017
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    |||||||||||||||| ||||||||||| |||| | || ||||||||  |||| |||||||    
T  13089077 aaaactcggtatccgacccaaaaaccgaataatctgagaggaccaatctcaccgcccactt 13089017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 330
Target Start/End: Complemental strand, 24196199 - 24196139
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    |||||||||||||| ||| ||||| ||||||||   ||||||||||| ||||| |||||||    
T  24196199 aaaactcggtatccaatcaaaaaatcgactaatccgaggggaccaatcccaccgcccactt 24196139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 330
Target Start/End: Complemental strand, 25293356 - 25293296
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    ||||||||||||||||||||| || ||||||||   ||||||||||| ||| | |||||||    
T  25293356 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccatcgcccactt 25293296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 330
Target Start/End: Original strand, 34516414 - 34516474
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    |||||| |||||||||||||| || ||||||||   ||||||||||| ||||| |||||||    
T  34516414 aaaacttggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccactt 34516474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 330
Target Start/End: Complemental strand, 35171997 - 35171937
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    ||||||||||||||||| ||| || ||||||||   ||||||||||| ||||| |||||||    
T  35171997 aaaactcggtatccgattcaagaatcgactaatccgaggggaccaatcccaccgcccactt 35171937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 270 - 332
Target Start/End: Original strand, 32094757 - 32094819
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccacttac 332  Q
    ||||||||||||||||||||| ||||||||||| | || |||||||| ||||||||| |||||    
T  32094757 aaaactcggtatccgatccaagaaccgactaatatgagaggaccaatcccaccacccgcttac 32094819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 270 - 330
Target Start/End: Original strand, 15566500 - 15566560
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    ||||||||||||||||||||| || |||||||| | ||||||||||| ||||| |||||||    
T  15566500 aaaactcggtatccgatccaagaatcgactaatctgaggggaccaatcccaccgcccactt 15566560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 270 - 330
Target Start/End: Original strand, 40133449 - 40133509
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    ||||||||||||||||||||| || |||||||||  ||||||||||| ||||| |||||||    
T  40133449 aaaactcggtatccgatccaagaatcgactaattcgaggggaccaatcccaccgcccactt 40133509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 270 - 332
Target Start/End: Original strand, 52821636 - 52821698
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccacttac 332  Q
    ||||||||||||||||||||| || ||||||||   ||||||||||| ||||| |||||||||    
T  52821636 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttac 52821698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 270 - 327
Target Start/End: Original strand, 33698706 - 33698763
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccaccca 327  Q
    ||||||||| ||||||||| | || |||||||||| ||||||||||| ||||||||||    
T  33698706 aaaactcggcatccgatccgagaatcgactaatttgaggggaccaatcccaccaccca 33698763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 330
Target Start/End: Original strand, 8097279 - 8097339
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    ||||||||||||||||||||| || ||||||||   ||||||||||| ||||| |||||||    
T  8097279 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccactt 8097339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 330
Target Start/End: Complemental strand, 24407458 - 24407398
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    ||||||||||||||||||||| || ||||||||   ||||||||||| ||||| |||||||    
T  24407458 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccactt 24407398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 330
Target Start/End: Complemental strand, 26174310 - 26174250
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    ||||||||||||||||||||| || ||||||||   ||||||||||| ||||| |||||||    
T  26174310 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccactt 26174250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 330
Target Start/End: Complemental strand, 32151621 - 32151561
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    ||||||||||||||||||||| || |||||||||  |||||||||||  |||| |||||||    
T  32151621 aaaactcggtatccgatccaagaatcgactaattcgaggggaccaatctcaccgcccactt 32151561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 330
Target Start/End: Original strand, 39041852 - 39041912
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    ||||||||||||||||||||| || ||||||||   || |||||||| |||||||||||||    
T  39041852 aaaactcggtatccgatccaagaatcgactaatccgagtggaccaatcccaccacccactt 39041912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 330
Target Start/End: Complemental strand, 46576545 - 46576485
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    ||||||||||||||||||||| || ||||||||  |||||||||||| | ||| |||||||    
T  46576545 aaaactcggtatccgatccaagaatcgactaatccaaggggaccaatccgaccgcccactt 46576485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 330
Target Start/End: Complemental strand, 48977585 - 48977525
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    |||||||||||||||||||||  ||||||||||   ||||||||||| ||||| |||||||    
T  48977585 aaaactcggtatccgatccaaggaccgactaatccgaggggaccaatcccaccgcccactt 48977525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 330
Target Start/End: Original strand, 49258262 - 49258322
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    ||||||||||||||||||||| || ||||||||   ||||||||||| ||||| |||||||    
T  49258262 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccactt 49258322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 330
Target Start/End: Original strand, 50731237 - 50731297
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    |||||||||||||||||||||  | |||||||| | ||||||||||| ||||| |||||||    
T  50731237 aaaactcggtatccgatccaaggatcgactaatctgaggggaccaatcccaccgcccactt 50731297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 330
Target Start/End: Complemental strand, 50781617 - 50781557
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    |||||||||||||||||||||  | |||||||| | ||||||||||| ||||| |||||||    
T  50781617 aaaactcggtatccgatccaaggatcgactaatctgaggggaccaatcccaccgcccactt 50781557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 330
Target Start/End: Original strand, 53848434 - 53848494
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    ||||||||||||||||||||| || ||||||||   ||||||||||| ||||| |||||||    
T  53848434 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccactt 53848494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 330
Target Start/End: Complemental strand, 54475878 - 54475818
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    ||||||||||||| ||||||| || ||||||||  |||||||||||| ||||| |||||||    
T  54475878 aaaactcggtatctgatccaagaatcgactaatccaaggggaccaatcccaccgcccactt 54475818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 270 - 316
Target Start/End: Original strand, 6041670 - 6041716
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaat 316  Q
    ||||||||||||| ||||||| ||||||||||| |||||||| ||||    
T  6041670 aaaactcggtatctgatccaagaaccgactaatctaaggggaacaat 6041716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 322
Target Start/End: Original strand, 10083819 - 10083871
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccacc 322  Q
    ||||||||||||||||||||| || ||||||||   ||||||||||| |||||    
T  10083819 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccacc 10083871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 322
Target Start/End: Original strand, 10190742 - 10190794
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccacc 322  Q
    ||||||||||||||||||||| || ||||||||   ||||||||||| |||||    
T  10190742 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccacc 10190794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 330
Target Start/End: Original strand, 17579135 - 17579195
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    |||||||| ||| ||||||||||| |||||||| | |||||||||||  |||| |||||||    
T  17579135 aaaactcgatattcgatccaaaaatcgactaatctgaggggaccaatctcaccgcccactt 17579195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 330
Target Start/End: Original strand, 24165715 - 24165775
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    ||||||||||||||||||||| || ||||||||   |||||| |||| ||||| |||||||    
T  24165715 aaaactcggtatccgatccaagaatcgactaatccgaggggaacaatcccaccgcccactt 24165775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 330
Target Start/End: Original strand, 25289715 - 25289774
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    ||||||||||||||||||||| || |||||||||  | ||||||||| ||||| |||||||    
T  25289715 aaaactcggtatccgatccaagaatcgactaattcga-gggaccaatcccaccgcccactt 25289774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 330
Target Start/End: Complemental strand, 30257821 - 30257761
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    |||| |||||||||||||||| || ||||||||   ||||||||||| ||||| |||||||    
T  30257821 aaaattcggtatccgatccaagaatcgactaatccgaggggaccaatgccaccgcccactt 30257761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 330
Target Start/End: Original strand, 33398468 - 33398528
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    |||| |||||||||||||||| || |||||||||  |||| |||||| ||||| |||||||    
T  33398468 aaaattcggtatccgatccaagaatcgactaattcgagggaaccaatcccaccgcccactt 33398528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 322
Target Start/End: Original strand, 53424177 - 53424229
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccacc 322  Q
    ||||||||||||||||||||| || ||||||||   ||||||||||| |||||    
T  53424177 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccacc 53424229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 322
Target Start/End: Complemental strand, 55287982 - 55287930
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccacc 322  Q
    |||| |||||||||||||||| || ||||||||| |||||||| ||| |||||    
T  55287982 aaaattcggtatccgatccaataatcgactaattcaaggggactaatcccacc 55287930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 38; Significance: 0.000000000002; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 277 - 330
Target Start/End: Original strand, 36848757 - 36848810
Alignment:
Q  277 ggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    |||||||||||||||||||||||||||| ||||||| ||| ||||| |||||||    
T  36848757 ggtatccgatccaaaaaccgactaatttgaggggactaatcccaccgcccactt 36848810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 270 - 330
Target Start/End: Original strand, 34610687 - 34610747
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    ||||||||||||||||||||| || |||||||||  ||||||||||||| ||| |||||||    
T  34610687 aaaactcggtatccgatccaagaatcgactaattcgaggggaccaattctaccgcccactt 34610747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 330
Target Start/End: Complemental strand, 2166897 - 2166837
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    |||||||||||||| ||| ||||| |||||||| | ||||||||||| ||||| |||||||    
T  2166897 aaaactcggtatccaatcaaaaaatcgactaatctgaggggaccaatcccaccgcccactt 2166837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 330
Target Start/End: Original strand, 2639411 - 2639471
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    ||||||||||||||||||||| || ||||||||   ||||||||||| ||||| |||||||    
T  2639411 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccactt 2639471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 330
Target Start/End: Complemental strand, 4718846 - 4718786
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    ||||||||||||||||||||| || ||||||||   ||||||||||| ||||| |||||||    
T  4718846 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccactt 4718786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 330
Target Start/End: Original strand, 8765526 - 8765586
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    ||||||||||||||||||||| || ||||||||   ||||||||||| ||||| |||||||    
T  8765526 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccactt 8765586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 330
Target Start/End: Complemental strand, 14633155 - 14633095
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    |||||| |||||||||||||| || ||||||||  |||||||||||| ||||| |||||||    
T  14633155 aaaacttggtatccgatccaagaatcgactaatccaaggggaccaatcccaccgcccactt 14633095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 330
Target Start/End: Complemental strand, 18128714 - 18128654
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    |||||||||||| |||||||| ||||||||||| | || |||||||| ||||| |||||||    
T  18128714 aaaactcggtattcgatccaagaaccgactaatctgagaggaccaatcccaccgcccactt 18128654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 330
Target Start/End: Complemental strand, 20306109 - 20306049
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    |||||||||||||||||||||  | |||||||||  ||||||||||| ||||| |||||||    
T  20306109 aaaactcggtatccgatccaaggatcgactaattcgaggggaccaatcccaccgcccactt 20306049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 330
Target Start/End: Complemental strand, 21092742 - 21092682
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    |||||||||||||||||||||  | |||||||||  ||||||||||| ||||| |||||||    
T  21092742 aaaactcggtatccgatccaaggatcgactaattcgaggggaccaatcccaccgcccactt 21092682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 330
Target Start/End: Complemental strand, 21603431 - 21603371
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    ||||||||||||||||||||| || ||||||||   ||||||||||| ||||| |||||||    
T  21603431 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccactt 21603371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 330
Target Start/End: Complemental strand, 24018584 - 24018524
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    |||||||| |||||| ||||| |||||||||||| ||||||||||||  |||| |||||||    
T  24018584 aaaactcgatatccggtccaagaaccgactaattcaaggggaccaatctcaccgcccactt 24018524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 271 - 322
Target Start/End: Original strand, 7557952 - 7558003
Alignment:
Q  271 aaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccacc 322  Q
    |||||||||||||||| |||||| |||||||||  ||||||||||| |||||    
T  7557952 aaactcggtatccgatgcaaaaatcgactaattcgaggggaccaatcccacc 7558003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 270 - 321
Target Start/End: Original strand, 9047279 - 9047329
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccac 321  Q
    |||| |||||||||||||||| |||||||||||| || ||||||||||||||    
T  9047279 aaaattcggtatccgatccaagaaccgactaattcaa-gggaccaattccac 9047329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 271 - 330
Target Start/End: Original strand, 15259407 - 15259466
Alignment:
Q  271 aaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    |||||||| ||||||||||| || |||||||||  |||||||||||| |||| |||||||    
T  15259407 aaactcggcatccgatccaagaatcgactaattcgaggggaccaattacaccgcccactt 15259466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 271 - 330
Target Start/End: Complemental strand, 28193674 - 28193615
Alignment:
Q  271 aaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    |||||||||||||||||||| || ||||||||   ||||||||||| ||||| |||||||    
T  28193674 aaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccactt 28193615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 270 - 316
Target Start/End: Complemental strand, 42328205 - 42328159
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaat 316  Q
    ||||||||||||||||||||| || |||||||||  |||||||||||    
T  42328205 aaaactcggtatccgatccaagaatcgactaattcgaggggaccaat 42328159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 330
Target Start/End: Complemental strand, 2618387 - 2618327
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    ||||||||| ||||||||||| || ||||||||   ||||||||||| ||||| |||||||    
T  2618387 aaaactcggaatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccactt 2618327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 330
Target Start/End: Complemental strand, 16990784 - 16990724
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    |||||| ||||||||||||||  ||||||||||  |||||||||| | ||||| |||||||    
T  16990784 aaaacttggtatccgatccaaggaccgactaatccaaggggaccagtcccaccgcccactt 16990724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 330
Target Start/End: Complemental strand, 19471811 - 19471751
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    |||||||||||||||||||||  | |||||||||  ||||||||||| ||| | |||||||    
T  19471811 aaaactcggtatccgatccaagtatcgactaattcgaggggaccaatcccatcgcccactt 19471751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 330
Target Start/End: Complemental strand, 19542735 - 19542675
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    |||||||||||||||||||||  | |||||||||  ||||||||||| ||| | |||||||    
T  19542735 aaaactcggtatccgatccaagtatcgactaattcgaggggaccaatcccatcgcccactt 19542675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 330
Target Start/End: Original strand, 19589961 - 19590021
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    |||||||||||||||||||||  | |||||||||  ||||||||||| ||| | |||||||    
T  19589961 aaaactcggtatccgatccaagtatcgactaattcgaggggaccaatcccatcgcccactt 19590021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 302
Target Start/End: Complemental strand, 20470117 - 20470085
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaat 302  Q
    |||||||||||||||||||||||| ||||||||    
T  20470117 aaaactcggtatccgatccaaaaatcgactaat 20470085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 330
Target Start/End: Complemental strand, 20505753 - 20505693
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    ||||||||| ||| |||| || ||||| ||||||| ||||||||||| ||||| |||||||    
T  20505753 aaaactcggcatctgatctaagaaccggctaatttgaggggaccaatcccaccgcccactt 20505693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 330
Target Start/End: Complemental strand, 25248547 - 25248488
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    |||||||||||||||||| ||||| ||||||||   ||||||||||| ||||| |||||||    
T  25248547 aaaactcggtatccgatc-aaaaatcgactaatccgaggggaccaatcccaccgcccactt 25248488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 330
Target Start/End: Complemental strand, 32879480 - 32879420
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    |||||||||||||| |||||| || ||||||||   ||||||||||| ||||| |||||||    
T  32879480 aaaactcggtatccaatccaagaatcgactaatccgaggggaccaatcccaccgcccactt 32879420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 322
Target Start/End: Original strand, 34237655 - 34237707
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccacc 322  Q
    ||||||||||||||||||||| || ||||||||   ||||||||||| |||||    
T  34237655 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccacc 34237707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 330
Target Start/End: Original strand, 42643118 - 42643178
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    ||||||||||||||||||||| || | ||||||   ||||||||||| ||||| |||||||    
T  42643118 aaaactcggtatccgatccaagaatcaactaatgcgaggggaccaatcccaccgcccactt 42643178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 37; Significance: 0.00000000001; HSPs: 24)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 270 - 330
Target Start/End: Complemental strand, 52494685 - 52494625
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    ||||||||||||||||||||| || |||||||||  ||||||||||| ||||| |||||||    
T  52494685 aaaactcggtatccgatccaagaatcgactaattcgaggggaccaatcccaccgcccactt 52494625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 270 - 327
Target Start/End: Original strand, 55158343 - 55158400
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccaccca 327  Q
    |||||||||| ||||||||||||| ||||||||   ||||||||||| ||||||||||    
T  55158343 aaaactcggtttccgatccaaaaatcgactaatccgaggggaccaatcccaccaccca 55158400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 330
Target Start/End: Complemental strand, 34723996 - 34723936
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    ||||||||||||||||||||| || ||||||||   || |||||||| |||||||||||||    
T  34723996 aaaactcggtatccgatccaagaatcgactaatccgagaggaccaatcccaccacccactt 34723936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 330
Target Start/End: Original strand, 34844758 - 34844818
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    ||||||||||||||||||||| || ||||||||   ||||||||||| ||||| |||||||    
T  34844758 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccactt 34844818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 330
Target Start/End: Original strand, 40058852 - 40058912
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    ||||||||||||||||||||| || ||||||||   ||||||||||| ||||| |||||||    
T  40058852 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccactt 40058912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 330
Target Start/End: Complemental strand, 44343711 - 44343651
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    ||||||||||||||||| ||| || |||||||||  ||||||||||| ||||| |||||||    
T  44343711 aaaactcggtatccgattcaagaatcgactaattcgaggggaccaatcccaccgcccactt 44343651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 322
Target Start/End: Original strand, 45787704 - 45787756
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccacc 322  Q
    ||||||||||||||||||||| || |||||||||  ||||||||||| |||||    
T  45787704 aaaactcggtatccgatccaagaatcgactaattcgaggggaccaatcccacc 45787756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 271 - 330
Target Start/End: Complemental strand, 52983815 - 52983756
Alignment:
Q  271 aaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    |||||||||||||||||||| || ||||||||   ||||||||||| ||||| |||||||    
T  52983815 aaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccactt 52983756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 270 - 332
Target Start/End: Complemental strand, 7093568 - 7093506
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccacttac 332  Q
    |||||||| ||||||||||||  |||||||||||  | ||||||||| ||||| |||||||||    
T  7093568 aaaactcgatatccgatccaaggaccgactaattcgaagggaccaatcccaccgcccacttac 7093506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 270 - 316
Target Start/End: Original strand, 13771482 - 13771528
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaat 316  Q
    |||| |||||||||||||||| ||||||||||||  |||||||||||    
T  13771482 aaaattcggtatccgatccaagaaccgactaattataggggaccaat 13771528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 327
Target Start/End: Original strand, 22488028 - 22488085
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccaccca 327  Q
    |||||| ||||||||||||||  |||||||||||| |||||| |||| ||||| ||||    
T  22488028 aaaacttggtatccgatccaaggaccgactaatttgaggggatcaatcccaccgccca 22488085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 327
Target Start/End: Original strand, 53787057 - 53787114
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccaccca 327  Q
    ||||| |||||| |||||||||||||||||||| | ||||||| ||| ||||| ||||    
T  53787057 aaaacccggtattcgatccaaaaaccgactaatctgaggggactaatcccaccgccca 53787114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 330
Target Start/End: Complemental strand, 4065057 - 4064997
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    |||| ||| ||||||||||||||| ||||||||   ||||||||||| ||||| |||||||    
T  4065057 aaaattcgatatccgatccaaaaatcgactaatccgaggggaccaatcccaccgcccactt 4064997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 330
Target Start/End: Original strand, 19660532 - 19660592
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    ||||||||||||||||||||| || ||||||||   |||||| |||| ||||| |||||||    
T  19660532 aaaactcggtatccgatccaagaatcgactaatccgaggggatcaatcccaccgcccactt 19660592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 330
Target Start/End: Complemental strand, 20566547 - 20566487
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    |||||||| |||||||||||| || |||||||| | ||||||||||| ||| | |||||||    
T  20566547 aaaactcgatatccgatccaagaatcgactaatctgaggggaccaatcccagcgcccactt 20566487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 330
Target Start/End: Original strand, 23131436 - 23131496
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    |||||||||||||||||| || || |||||||||  ||||||||||| | ||| |||||||    
T  23131436 aaaactcggtatccgatcgaagaatcgactaattcgaggggaccaatcctaccgcccactt 23131496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 322
Target Start/End: Complemental strand, 23639821 - 23639769
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccacc 322  Q
    ||||||||||||||||||||| || ||||||||   ||||||||||| |||||    
T  23639821 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccacc 23639769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 322
Target Start/End: Complemental strand, 23645479 - 23645427
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccacc 322  Q
    ||||||||||||||||||||| || ||||||||   ||||||||||| |||||    
T  23645479 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccacc 23645427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 330
Target Start/End: Original strand, 27528795 - 27528855
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    ||||||||||||||||||||| || ||||||||   |||||||||||  |||| |||||||    
T  27528795 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatctcaccgcccactt 27528855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 330
Target Start/End: Complemental strand, 32986394 - 32986334
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    ||||||||||||||||||||| || |||||| |   ||||||||||| ||||| |||||||    
T  32986394 aaaactcggtatccgatccaagaatcgactattccgaggggaccaatcccaccgcccactt 32986334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 322
Target Start/End: Complemental strand, 35229365 - 35229313
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccacc 322  Q
    |||| |||||||||||||||| || |||||||||  ||||||||||| |||||    
T  35229365 aaaattcggtatccgatccaagaatcgactaattcgaggggaccaatcccacc 35229313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 322
Target Start/End: Original strand, 47464108 - 47464160
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccacc 322  Q
    |||| |||||||| ||| |||  |||||||||||||||| |||||||||||||    
T  47464108 aaaattcggtatctgattcaaggaccgactaatttaaggagaccaattccacc 47464160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 330
Target Start/End: Complemental strand, 51535818 - 51535758
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    |||| ||||||||||||| || || |||||||||  ||||||||||| ||||| |||||||    
T  51535818 aaaattcggtatccgatctaagaatcgactaattcgaggggaccaatcccaccgcccactt 51535758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 330
Target Start/End: Original strand, 54127342 - 54127402
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    ||||||| ||||||| ||||| |||||||||||   ||||||||||| ||||| |||||||    
T  54127342 aaaactcagtatccggtccaagaaccgactaatccgaggggaccaatcccaccgcccactt 54127402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 330
Target Start/End: Complemental strand, 66951 - 66891
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    |||||||||||||||||||||  ||||||||||   ||||||||||| ||||| |||||||    
T  66951 aaaactcggtatccgatccaaggaccgactaatccgaggggaccaatcccaccgcccactt 66891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 330
Target Start/End: Original strand, 97366 - 97426
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    ||||||||||||||| |||||||||||||||||   || |||||||| ||||| |||||||    
T  97366 aaaactcggtatccggtccaaaaaccgactaatacgagaggaccaatcccaccgcccactt 97426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 33; Significance: 0.000000002; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 330
Target Start/End: Original strand, 654146 - 654206
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    ||||||||||||||||||||| || ||||||||   ||||||||||| ||||| |||||||    
T  654146 aaaactcggtatccgatccaataatcgactaatccgaggggaccaatcccaccgcccactt 654206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 322
Target Start/End: Complemental strand, 1345132 - 1345080
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccacc 322  Q
    ||||||||||||||||||||| || ||||||||  |||||||||||| |||||    
T  1345132 aaaactcggtatccgatccaagaatcgactaatccaaggggaccaatcccacc 1345080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 330
Target Start/End: Original strand, 3222636 - 3222696
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    ||||||||||||||||||||| || ||||||||   ||||||||||| ||||| |||||||    
T  3222636 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccactt 3222696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 330
Target Start/End: Original strand, 5360071 - 5360131
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    |||||||||||||||||| || || |||||||||  ||||||||||| ||||| |||||||    
T  5360071 aaaactcggtatccgatctaagaatcgactaattcgaggggaccaatcccaccgcccactt 5360131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 330
Target Start/End: Complemental strand, 14213079 - 14213019
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    ||||||||||||||||||||| || ||||||||   || |||||||| |||||||||||||    
T  14213079 aaaactcggtatccgatccaagaatcgactaatccgagtggaccaatcccaccacccactt 14213019  T

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Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 330
Target Start/End: Complemental strand, 34147543 - 34147483
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    ||||||||||||||||||||| || ||||||||   ||||||||||| ||||| |||||||    
T  34147543 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccactt 34147483  T

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Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 330
Target Start/End: Complemental strand, 34160159 - 34160099
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    ||||||||||||||||||||| || ||||||||   ||||||||||| ||||| |||||||    
T  34160159 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccactt 34160099  T

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Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 271 - 330
Target Start/End: Complemental strand, 9239171 - 9239112
Alignment:
Q  271 aaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    |||||||||||||||||||| || ||||||||   ||||||||||| ||||| |||||||    
T  9239171 aaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccactt 9239112  T

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Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 331
Target Start/End: Complemental strand, 11841097 - 11841036
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactta 331  Q
    ||||||||||||||||||||| || |||||||||  ||||||| ||| |||||  |||||||    
T  11841097 aaaactcggtatccgatccaataatcgactaattcgaggggactaatcccaccgtccactta 11841036  T

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Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 327
Target Start/End: Original strand, 15360098 - 15360155
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccaccca 327  Q
    ||||||||||||||||||||| || ||||||||   ||||||||||| ||||| ||||    
T  15360098 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgccca 15360155  T

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Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 330
Target Start/End: Original strand, 21148511 - 21148571
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    ||||||||||||||||| ||| || ||||||||   ||||||||||| ||||| |||||||    
T  21148511 aaaactcggtatccgattcaagaatcgactaatccgaggggaccaatcccaccgcccactt 21148571  T

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Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 330
Target Start/End: Complemental strand, 28672264 - 28672204
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    ||||||||||||| ||||||| || ||||||||   ||||||||||| ||||| |||||||    
T  28672264 aaaactcggtatctgatccaagaatcgactaatccgaggggaccaatcccaccgcccactt 28672204  T

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Target: scaffold0576 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 327
Target Start/End: Original strand, 5082 - 5139
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccaccca 327  Q
    ||||||||||||||||||||| || ||||||||   ||||||||||| ||||| ||||    
T  5082 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgccca 5139  T

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Target: scaffold0200 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 322
Target Start/End: Original strand, 26609 - 26654
Alignment:
Q  277 ggtatccgatccaaaaaccgactaatttaaggggaccaattccacc 322  Q
    ||||| ||||||||||| |||||||||  |||||||||||||||||    
T  26609 ggtattcgatccaaaaatcgactaattcgaggggaccaattccacc 26654  T

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Target: scaffold0217 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 330
Target Start/End: Original strand, 7309 - 7369
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    |||||| |||||||||||||| || ||||||||   ||||||||||| ||||| |||||||    
T  7309 aaaacttggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccactt 7369  T

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Target: scaffold0102 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 330
Target Start/End: Complemental strand, 39289 - 39229
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    ||||||||||||| ||||||| || ||||||||   ||||||||||| ||||| |||||||    
T  39289 aaaactcggtatctgatccaagaatcgactaatccgaggggaccaatcccaccgcccactt 39229  T

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Target: scaffold0019 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 330
Target Start/End: Complemental strand, 162006 - 161946
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    ||||||||||||| ||||||| || ||||||||   ||||||||||| ||||| |||||||    
T  162006 aaaactcggtatctgatccaagaatcgactaatccgaggggaccaatcccaccgcccactt 161946  T

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Target: scaffold0016 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 330
Target Start/End: Complemental strand, 32484 - 32425
Alignment:
Q  270 aaaactcggtatccgatccaaaaaccgactaatttaaggggaccaattccaccacccactt 330  Q
    |||||||||||||||||| || || ||||||||   ||||||||||| |||||||||||||    
T  32484 aaaactcggtatccgatc-aagaatcgactaatccgaggggaccaatcccaccacccactt 32425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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