View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5148-Insertion-8 (Length: 249)
Name: NF5148-Insertion-8
Description: NF5148
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5148-Insertion-8 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 150; Significance: 2e-79; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 12 - 249
Target Start/End: Complemental strand, 43817455 - 43817205
Alignment:
| Q |
12 |
cttgccacctaaatgagatggaacttttgttgattacatggaacct-----------caccttgaagatgtgctcacatatgtttcttgcatacaagaac |
100 |
Q |
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| T |
43817455 |
cttgccacctaaatgagatggaacttttgttgattacatggaacctatttaagacatcaccttgaagatgttctcacatatgtttcttgcatacaagaac |
43817356 |
T |
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| Q |
101 |
aacaaagaaattatccaaaccaaatcatgtgttcagagcatcacataagaaatatctatagcagtttaagttgtataatagacattgacaaa--agtggc |
198 |
Q |
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| T |
43817355 |
aacaaagaaattatccaaaccaaatcatgtgttcagagcatcagataagaaatatctatagcagtttaagttgtataatagacattgacaaaccattatt |
43817256 |
T |
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| Q |
199 |
ttgccattattcaatcaataatatcacaagactggagtcaaaagtggcttg |
249 |
Q |
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| T |
43817255 |
caaatataattcaatcaataatatcacaagactggagccaaaagtggcttg |
43817205 |
T |
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