View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5148_high_17 (Length: 234)
Name: NF5148_high_17
Description: NF5148
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5148_high_17 |
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Alignment Details
Target: chr8 (Bit Score: 203; Significance: 1e-111; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 10 - 216
Target Start/End: Complemental strand, 3428478 - 3428272
Alignment:
| Q |
10 |
aaagtaaaaataggtatagtaatggcactagaaaaggtttccttacatgatatacataactgttctagaaaaatagaaaatagagggaaagttaggagat |
109 |
Q |
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| T |
3428478 |
aaagtaaaaataggtatagtaatggcactagaaaaggtttccttacatgatatacataactgttctagaaaaatagaaaatatagggaaagttaggagat |
3428379 |
T |
|
| Q |
110 |
caaggagcaaaaacattccttaattggtttctgcaagagctttttgagtaagacatttgaagtttttctacacaaaattagtcatcagtgagaccaagtt |
209 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3428378 |
caaggagcaaaaacattccttaattggtttctgcaagagctttttgagtaagacatttgaagtttttctacacaaaattagtcatcagtgagaccaagtt |
3428279 |
T |
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| Q |
210 |
tattcat |
216 |
Q |
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||||||| |
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| T |
3428278 |
tattcat |
3428272 |
T |
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