View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5150-Insertion-4 (Length: 428)
Name: NF5150-Insertion-4
Description: NF5150
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5150-Insertion-4 |
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Alignment Details
Target: chr5 (Bit Score: 365; Significance: 0; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 365; E-Value: 0
Query Start/End: Original strand, 8 - 388
Target Start/End: Complemental strand, 5487276 - 5486896
Alignment:
| Q |
8 |
tctgcttcattgctttccatccttctgactccgaaacagttctgaagttttttagtattttacggtgacaaatgagactgagccgcggagcatcacacag |
107 |
Q |
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| T |
5487276 |
tctgcttcattgctttccatccttctgactccgaaacagttctgaagttttttagtattttacggtgacaaatgagactgagccgcggagcatcacacag |
5487177 |
T |
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| Q |
108 |
taatgcaagttgaaatacatcaactagattatccattgtgagtaaacccaattctagcttctgttcacattctcgtttcaagtgagggaccgcgtataca |
207 |
Q |
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| T |
5487176 |
taatgcaagttgaaatacatcaactagattatccattgtgagtaaacccaattctagcttctgttcacattctcgtttcaagtgagggaccgcatataca |
5487077 |
T |
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| Q |
208 |
tgagacagcaccaacaaatgtaggacaaattccttcatttcttctttctcgtaactgaaaaaaggcacaaaatttcagcacatttatatgatgcaaaatg |
307 |
Q |
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| T |
5487076 |
tgagacagcaccaacaaatgtaggacaaattccttcatttcttctttctcgtaactgaaaaaaggcacaaaatttcagcacatttatatgatgcaaaatg |
5486977 |
T |
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| Q |
308 |
catttcagccacagcaactacgatgcattcaaaaaaggacagtagtaactctgtaaccttgatcagctatgttgatctcct |
388 |
Q |
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| T |
5486976 |
catttcagccacagcgactatgatgcattcaaaaaaggacagtagtaactctgtaaccttgatcggctatgttgatctcct |
5486896 |
T |
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