View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5150-Insertion-5 (Length: 248)
Name: NF5150-Insertion-5
Description: NF5150
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5150-Insertion-5 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 8 - 248
Target Start/End: Complemental strand, 39281607 - 39281367
Alignment:
| Q |
8 |
cttctattcaacattttcattttctctaccaaaacagtaatactttatcatcaagtaacaataattcataatctgtaataatccacattgaagctagaaa |
107 |
Q |
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| T |
39281607 |
cttctattcaacattttcattttctctaccaaaacagtaatactttatcatcaagtaacaataattcataatctgtaataatccacattgaagctagaaa |
39281508 |
T |
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| Q |
108 |
gagttgttcgtttcaatgaagaagaaactgaaagagatgataggcataatgaaggacaaagcatcacaaagcaaagctgcaattttatcaaaaagcaaaa |
207 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
39281507 |
gagttgttcgtttcaatgaagaagaaactgaaagagatgataggcataatgaaggacaaagcatcacaaagcaaagctgcaattttatcaaaaaccaaaa |
39281408 |
T |
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| Q |
208 |
ctctttccctccttcgcgccactacacacgattcttacaac |
248 |
Q |
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| T |
39281407 |
ctctttccctccttcgcgccacgacacacgattcttacaac |
39281367 |
T |
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