View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF5150_high_3 (Length: 416)
Name: NF5150_high_3
Description: NF5150
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5150_high_3 |
 | |
|
| [»] scaffold0029 (2 HSPs) |
| | |
|
Alignment Details
Target: chr3 (Bit Score: 382; Significance: 0; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 382; E-Value: 0
Query Start/End: Original strand, 1 - 407
Target Start/End: Original strand, 33906421 - 33906827
Alignment:
| Q |
1 |
ggattaagatagttcgacttatgagataaaagccacacacacatagatagcttagagtgcgaagacccttcatacaaaggtgtattactttcactcaaca |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
33906421 |
ggattaagatagttcgacttatgagataaaagccacacacacatagatagcttagagtgcgaagacccttcatacaaaggtgtattactttcactcaaca |
33906520 |
T |
|
| Q |
101 |
atcggtaaaatctttgcgccttctcattcgggggttgttcctcttcatcatcttcaacatcttcaccgtaagacaattccacccctaaagcgtccgcaac |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
33906521 |
atcggtaaaatctttgcgccttctcattcgggggttgttcctcttcatcatcttcaacatcttcaccgtaagacaattccacccctaaagcgtccgcaac |
33906620 |
T |
|
| Q |
201 |
catatcatccatcatgttgaattgatctgtgttgacatcttcattgtattccacatttgtttccacatttgttccaccatggctagtagaagcttgtgca |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
33906621 |
catatcatccatcatgttgaattgatctgtgttgacatcttcattgtattccacatttgtttccacatttgttccaccatggctagtagaagcttgtgca |
33906720 |
T |
|
| Q |
301 |
ttgacccctaccccaaaattctgaaacatttcaccattatatgtccaaacccaataattaggcataaaaccaacnnnnnnnaggtgtttcttcacatctc |
400 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
33906721 |
ttgacccctgccccaaaattctgaaacatttcaccattatatgtccaaacccaataattaggcataaaaccaactttttttaggtgtttcttcacatctc |
33906820 |
T |
|
| Q |
401 |
caggatc |
407 |
Q |
| |
|
||||||| |
|
|
| T |
33906821 |
caggatc |
33906827 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 382; Significance: 0; HSPs: 5)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 382; E-Value: 0
Query Start/End: Original strand, 1 - 407
Target Start/End: Original strand, 4966578 - 4966984
Alignment:
| Q |
1 |
ggattaagatagttcgacttatgagataaaagccacacacacatagatagcttagagtgcgaagacccttcatacaaaggtgtattactttcactcaaca |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4966578 |
ggattaagatagttcgacttatgagataaaagccacacacacatagatagcttagagtgcgaagacccttcatacaaaggtgtattactttcactcaaca |
4966677 |
T |
|
| Q |
101 |
atcggtaaaatctttgcgccttctcattcgggggttgttcctcttcatcatcttcaacatcttcaccgtaagacaattccacccctaaagcgtccgcaac |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4966678 |
atcggtaaaatctttgcgccttctcattcgggggttgttcctcttcatcatcttcaacatcttcaccgtaagacaattccacccctaaagcgtccgcaac |
4966777 |
T |
|
| Q |
201 |
catatcatccatcatgttgaattgatctgtgttgacatcttcattgtattccacatttgtttccacatttgttccaccatggctagtagaagcttgtgca |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4966778 |
catatcatccatcatgttgaattgatctgtgttgacatcttcattgtattccacatttgtttccacatttgttccaccatggctagtagaagcttgtgca |
4966877 |
T |
|
| Q |
301 |
ttgacccctaccccaaaattctgaaacatttcaccattatatgtccaaacccaataattaggcataaaaccaacnnnnnnnaggtgtttcttcacatctc |
400 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
4966878 |
ttgacccctgccccaaaattctgaaacatttcaccattatatgtccaaacccaataattaggcataaaaccaactttttttaggtgtttcttcacatctc |
4966977 |
T |
|
| Q |
401 |
caggatc |
407 |
Q |
| |
|
||||||| |
|
|
| T |
4966978 |
caggatc |
4966984 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 378; E-Value: 0
Query Start/End: Original strand, 1 - 407
Target Start/End: Complemental strand, 35595747 - 35595341
Alignment:
| Q |
1 |
ggattaagatagttcgacttatgagataaaagccacacacacatagatagcttagagtgcgaagacccttcatacaaaggtgtattactttcactcaaca |
100 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35595747 |
ggattaagataattcgacttatgagataaaagccacacacacatagatagcttagagtgcgaagacccttcatacaaaggtgtattactttcactcaaca |
35595648 |
T |
|
| Q |
101 |
atcggtaaaatctttgcgccttctcattcgggggttgttcctcttcatcatcttcaacatcttcaccgtaagacaattccacccctaaagcgtccgcaac |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35595647 |
atcggtaaaatctttgcgccttctcattcgggggttgttcctcttcatcatcttcaacatcttcaccgtaagacaattccacccctaaagcgtccgcaac |
35595548 |
T |
|
| Q |
201 |
catatcatccatcatgttgaattgatctgtgttgacatcttcattgtattccacatttgtttccacatttgttccaccatggctagtagaagcttgtgca |
300 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35595547 |
catatcatccatcatgttgaattgttctgtgttgacatcttcattgtattccacatttgtttccacatttgttccaccatggctagtagaagcttgtgca |
35595448 |
T |
|
| Q |
301 |
ttgacccctaccccaaaattctgaaacatttcaccattatatgtccaaacccaataattaggcataaaaccaacnnnnnnnaggtgtttcttcacatctc |
400 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
35595447 |
ttgacccctaccccaaaattctgaaacatttcaccattatatgtccaaacccaataattaggcataaaaccaactttttttaggtgtttcttcacatctc |
35595348 |
T |
|
| Q |
401 |
caggatc |
407 |
Q |
| |
|
||||||| |
|
|
| T |
35595347 |
caggatc |
35595341 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 1 - 289
Target Start/End: Original strand, 37390550 - 37390838
Alignment:
| Q |
1 |
ggattaagatagttcgacttatgagataaaagccacacacacatagatagcttagagtgcgaagacccttcatacaaaggtgtattactttcactcaaca |
100 |
Q |
| |
|
||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
37390550 |
ggattaagataatttgacttatgagataaaagccacacacacatagatagcttagagtacgaagatccttcatacaaaggtgtattactttcactcaaca |
37390649 |
T |
|
| Q |
101 |
atcggtaaaatctttgcgccttctcattcgggggttgttcctcttcatcatcttcaacatcttcaccgtaagacaattccacccctaaagcgtccgcaac |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37390650 |
atcggtaaaatctttgcgccttctcattcgggggttgttcctcttcatcatcttcaacatcttcaccgtaagacaattccacccctaaagcgtccgcaac |
37390749 |
T |
|
| Q |
201 |
catatcatccatcatgttgaattgatctgtgttgacatcttcattgtattccacatttgtttccacatttgttccaccatggctagtag |
289 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
37390750 |
catatcatccatcatgttgaattgttctgtgttgacatcttcattgtattccacatttgtttccacatttgttccaccatggccagtag |
37390838 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 151; E-Value: 9e-80
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 37390290 - 37390456
Alignment:
| Q |
1 |
ggattaagatagttcgacttatgagataaaagccacacacacatagatagcttagagtgcgaagacccttcatacaaaggtgtattactttcactcaaca |
100 |
Q |
| |
|
||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37390290 |
ggattaagataatttgacttatgagataaaagccacacacacatagatagcttagagtacgaagacccttcatacaaaggtgtattactttcactcaaca |
37390389 |
T |
|
| Q |
101 |
atcggtaaaatctttgcgccttctcattcgggggttgttcctcttcatcatcttcaacatcttcacc |
167 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
37390390 |
atcggtaaaatctttgcgccttctcattcgggggttgttcctcttcatcatcttcaacatcatcacc |
37390456 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 297 - 407
Target Start/End: Original strand, 37391048 - 37391158
Alignment:
| Q |
297 |
tgcattgacccctaccccaaaattctgaaacatttcaccattatatgtccaaacccaataattaggcataaaaccaacnnnnnnnaggtgtttcttcaca |
396 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||| |||| | ||||||||||||| |
|
|
| T |
37391048 |
tgcattgacccctaccccaaaattctgaaacatttcaccattatatgtccaaacccaataattaagtataaaatcaactttttttaagtgtttcttcaca |
37391147 |
T |
|
| Q |
397 |
tctccaggatc |
407 |
Q |
| |
|
||||||||||| |
|
|
| T |
37391148 |
tctccaggatc |
37391158 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 378; Significance: 0; HSPs: 8)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 378; E-Value: 0
Query Start/End: Original strand, 1 - 407
Target Start/End: Original strand, 38970779 - 38971185
Alignment:
| Q |
1 |
ggattaagatagttcgacttatgagataaaagccacacacacatagatagcttagagtgcgaagacccttcatacaaaggtgtattactttcactcaaca |
100 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38970779 |
ggattaagataattcgacttatgagataaaagccacacacacatagatagcttagagtgcgaagacccttcatacaaaggtgtattactttcactcaaca |
38970878 |
T |
|
| Q |
101 |
atcggtaaaatctttgcgccttctcattcgggggttgttcctcttcatcatcttcaacatcttcaccgtaagacaattccacccctaaagcgtccgcaac |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38970879 |
atcggtaaaatctttgcgccttctcattcgggggttgttcctcttcatcatcttcaacatcttcaccgtaagacaattccacccctaaagcgtccgcaac |
38970978 |
T |
|
| Q |
201 |
catatcatccatcatgttgaattgatctgtgttgacatcttcattgtattccacatttgtttccacatttgttccaccatggctagtagaagcttgtgca |
300 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38970979 |
catatcatccatcatgttgaattgttctgtgttgacatcttcattgtattccacatttgtttccacatttgttccaccatggctagtagaagcttgtgca |
38971078 |
T |
|
| Q |
301 |
ttgacccctaccccaaaattctgaaacatttcaccattatatgtccaaacccaataattaggcataaaaccaacnnnnnnnaggtgtttcttcacatctc |
400 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
38971079 |
ttgacccctaccccaaaattctgaaacatttcaccattatatgtccaaacccaataattaggcataaaaccaactttttttaggtgtttcttcacatctc |
38971178 |
T |
|
| Q |
401 |
caggatc |
407 |
Q |
| |
|
||||||| |
|
|
| T |
38971179 |
caggatc |
38971185 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 19 - 189
Target Start/End: Complemental strand, 13089234 - 13089065
Alignment:
| Q |
19 |
ttatgagataaaagccacacacacatagatagcttagagtgcgaagacccttcatacaaaggtgtattactttcactcaacaatcggtaaaatctttgcg |
118 |
Q |
| |
|
||||||| || ||||| |||||||||||||| |||| ||||||| |||||||| |||| ||||||||||||||| | | |||| || ||||||| ||| |
|
|
| T |
13089234 |
ttatgagctataagcctcacacacatagataacttattgtgcgaaaacccttcaaacaatggtgtattactttcatttagcaattgg-aaaatctccgcg |
13089136 |
T |
|
| Q |
119 |
ccttctcattcgggggttgttcctcttcatcatcttcaacatcttcaccgtaagacaattccacccctaaa |
189 |
Q |
| |
|
| |||||||||||| |||||||| || ||||||||||||||| || ||||||||||||||||| ||||| |
|
|
| T |
13089135 |
ctttctcattcgggagttgttcccctcgatcatcttcaacatcatcgtcgtaagacaattccaccactaaa |
13089065 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 84 - 224
Target Start/End: Original strand, 10801148 - 10801288
Alignment:
| Q |
84 |
attactttcactcaacaatcggtaaaatctttgcgccttctcattcgggggttgttcctcttcatcatcttcaacatcttcaccgtaagacaattccacc |
183 |
Q |
| |
|
||||| |||||||||||| ||||||||||||| || | |||||| ||||||| ||| ||| |||||||||||||| ||| ||||||||||||||| |
|
|
| T |
10801148 |
attacattcactcaacaactggtaaaatctttgggcttgctcatttgggggttcttcaccttgttcatcttcaacatcatcattgtaagacaattccaca |
10801247 |
T |
|
| Q |
184 |
cctaaagcgtccgcaaccatatcatccatcatgttgaattg |
224 |
Q |
| |
|
|||||||| || || |||||||||| ||||||||||||||| |
|
|
| T |
10801248 |
cctaaagcatcagcgaccatatcattcatcatgttgaattg |
10801288 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 84 - 224
Target Start/End: Complemental strand, 10996441 - 10996301
Alignment:
| Q |
84 |
attactttcactcaacaatcggtaaaatctttgcgccttctcattcgggggttgttcctcttcatcatcttcaacatcttcaccgtaagacaattccacc |
183 |
Q |
| |
|
||||| |||||||||||| ||||||||||||| || | |||||| ||||||| ||| ||| |||||||||||||| ||| ||||||||||||||| |
|
|
| T |
10996441 |
attacattcactcaacaactggtaaaatctttgggcttgctcatttgggggttcttcaccttgttcatcttcaacatcatcattgtaagacaattccaca |
10996342 |
T |
|
| Q |
184 |
cctaaagcgtccgcaaccatatcatccatcatgttgaattg |
224 |
Q |
| |
|
|||||||| || || |||||||||| ||||||||||||||| |
|
|
| T |
10996341 |
cctaaagcatcagcgaccatatcattcatcatgttgaattg |
10996301 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 289 - 374
Target Start/End: Complemental strand, 7623833 - 7623748
Alignment:
| Q |
289 |
gaagcttgtgcattgacccctaccccaaaattctgaaacatttcaccattatatgtccaaacccaataattaggcataaaaccaac |
374 |
Q |
| |
|
||||||||||||||||| || ||||||||||| ||||| |||||| ||||| ||||||||||||||| ||||||||| ||||| |
|
|
| T |
7623833 |
gaagcttgtgcattgactcccaccccaaaattttgaaattgttcaccgttataaatccaaacccaataatcaggcataaatccaac |
7623748 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 289 - 374
Target Start/End: Original strand, 10801320 - 10801405
Alignment:
| Q |
289 |
gaagcttgtgcattgacccctaccccaaaattctgaaacatttcaccattatatgtccaaacccaataattaggcataaaaccaac |
374 |
Q |
| |
|
||||||||||||||||| || |||||||||| |||||| |||||| ||||| ||||||||||||||| ||||||||| ||||| |
|
|
| T |
10801320 |
gaagcttgtgcattgactcccgccccaaaattttgaaactgttcaccgttataaatccaaacccaataatcaggcataaatccaac |
10801405 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 289 - 374
Target Start/End: Complemental strand, 10996269 - 10996184
Alignment:
| Q |
289 |
gaagcttgtgcattgacccctaccccaaaattctgaaacatttcaccattatatgtccaaacccaataattaggcataaaaccaac |
374 |
Q |
| |
|
||||||||||||||||| || |||||||||| ||||| |||||| ||||| ||||||||||||||| ||||||||| ||||| |
|
|
| T |
10996269 |
gaagcttgtgcattgactcccgccccaaaattttgaaattgttcaccgttataaatccaaacccaataatcaggcataaatccaac |
10996184 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 168 - 224
Target Start/End: Complemental strand, 7623921 - 7623865
Alignment:
| Q |
168 |
gtaagacaattccacccctaaagcgtccgcaaccatatcatccatcatgttgaattg |
224 |
Q |
| |
|
||||||||||||||| |||||||| || || |||||||||| ||||||||||||||| |
|
|
| T |
7623921 |
gtaagacaattccacacctaaagcatcagcgaccatatcattcatcatgttgaattg |
7623865 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 374; Significance: 0; HSPs: 8)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 374; E-Value: 0
Query Start/End: Original strand, 1 - 407
Target Start/End: Original strand, 37572247 - 37572653
Alignment:
| Q |
1 |
ggattaagatagttcgacttatgagataaaagccacacacacatagatagcttagagtgcgaagacccttcatacaaaggtgtattactttcactcaaca |
100 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37572247 |
ggattaagataattcgacttatgagataaaagccacacacacatagatagcttagagtgcgaagacccttcatacaaaggtgtattactttcactcaaca |
37572346 |
T |
|
| Q |
101 |
atcggtaaaatctttgcgccttctcattcgggggttgttcctcttcatcatcttcaacatcttcaccgtaagacaattccacccctaaagcgtccgcaac |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
37572347 |
atcggtaaaatctttgcgccttctcattcgggggttgttcctcttcatcatcttcaacatcttcaccgtaagacaattccacccctaaagcatccgcaac |
37572446 |
T |
|
| Q |
201 |
catatcatccatcatgttgaattgatctgtgttgacatcttcattgtattccacatttgtttccacatttgttccaccatggctagtagaagcttgtgca |
300 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37572447 |
catatcatccatcatgttgaattgttctgtgttgacatcttcattgtattccacatttgtttccacatttgttccaccatggctagtagaagcttgtgca |
37572546 |
T |
|
| Q |
301 |
ttgacccctaccccaaaattctgaaacatttcaccattatatgtccaaacccaataattaggcataaaaccaacnnnnnnnaggtgtttcttcacatctc |
400 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
37572547 |
ttgacccctaccccaaaattctgaaacatttcaccattatatgtccaaacccaataattaggcataaaaccaactttttttaggtgtttcttcacatctc |
37572646 |
T |
|
| Q |
401 |
caggatc |
407 |
Q |
| |
|
||||||| |
|
|
| T |
37572647 |
caggatc |
37572653 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 363; E-Value: 0
Query Start/End: Original strand, 8 - 407
Target Start/End: Original strand, 33889256 - 33889655
Alignment:
| Q |
8 |
gatagttcgacttatgagataaaagccacacacacatagatagcttagagtgcgaagacccttcatacaaaggtgtattactttcactcaacaatcggta |
107 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
33889256 |
gataattcgacttatgagataaaagccacacacacatagatagcttagagtgcgaagacccttcatacaaaggtgtattactttcactcaacaatcggta |
33889355 |
T |
|
| Q |
108 |
aaatctttgcgccttctcattcgggggttgttcctcttcatcatcttcaacatcttcaccgtaagacaattccacccctaaagcgtccgcaaccatatca |
207 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
33889356 |
aaatctttgcgccttctcattcgggggttgttcctcttcatcatcttcaacatcttcaccgtaagacaattccacccctaaagcatccgcaaccatatca |
33889455 |
T |
|
| Q |
208 |
tccatcatgttgaattgatctgtgttgacatcttcattgtattccacatttgtttccacatttgttccaccatggctagtagaagcttgtgcattgaccc |
307 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
33889456 |
tccatcatgttgaattgttctgtgttgacatcttcattgtattccacatttgtttccacatttgtttcaccatggctagtagaagcttgtgcattgaccc |
33889555 |
T |
|
| Q |
308 |
ctaccccaaaattctgaaacatttcaccattatatgtccaaacccaataattaggcataaaaccaacnnnnnnnaggtgtttcttcacatctccaggatc |
407 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
33889556 |
ctaccccaaaattctgaaacatttcaccattatatgtccaaacccaataattaggcataaaaccaactttttttaggtgtttcttcacatctccaggatc |
33889655 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 18 - 224
Target Start/End: Complemental strand, 34609164 - 34608958
Alignment:
| Q |
18 |
cttatgagataaaagccacacacacatagatagcttagagtgcgaagacccttcatacaaaggtgtattactttcactcaacaatcggtaaaatctttgc |
117 |
Q |
| |
|
|||||||| |||||| | ||||||||| |||| ||| || |||| | |||||||| ||| || ||||| |||| ||||||| ||||||||| || |
|
|
| T |
34609164 |
cttatgagctaaaagtctcacacacattgataactttgattgcgtacacccttcaaacagtgggacattacattcattcaacaactcgtaaaatctctgg |
34609065 |
T |
|
| Q |
118 |
gccttctcattcgggggttgttcctcttcatcatcttcaacatcttcaccgtaagacaattccacccctaaagcgtccgcaaccatatcatccatcatgt |
217 |
Q |
| |
|
|| | |||||| ||||||||||| ||| ||||||||||| || | | ||||||||||||||| |||||||| || || |||||||||| |||||||| |
|
|
| T |
34609064 |
gcttgctcatttgggggttgttcgccttgttcatcttcaacgtcattattgtaagacaattccacacctaaagcatcagcgaccatatcattcatcatgt |
34608965 |
T |
|
| Q |
218 |
tgaattg |
224 |
Q |
| |
|
||||||| |
|
|
| T |
34608964 |
tgaattg |
34608958 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 18 - 224
Target Start/End: Original strand, 5021820 - 5022026
Alignment:
| Q |
18 |
cttatgagataaaagccacacacacatagatagcttagagtgcgaagacccttcatacaaaggtgtattactttcactcaacaatcggtaaaatctttgc |
117 |
Q |
| |
|
|||||||| |||||| | |||||||| |||| ||| || |||| | |||||||| ||| || ||||| |||| ||||||| |||||||||||| |
|
|
| T |
5021820 |
cttatgagctaaaagtctgacacacattgataactttgattgcgtacacccttcaaacagtgggacattacattcattcaacaactcgtaaaatctttgg |
5021919 |
T |
|
| Q |
118 |
gccttctcattcgggggttgttcctcttcatcatcttcaacatcttcaccgtaagacaattccacccctaaagcgtccgcaaccatatcatccatcatgt |
217 |
Q |
| |
|
|| | |||||| ||||||||||| ||| ||||||||||| || | | |||||||||||||| |||||||| || || |||||||||| |||||||| |
|
|
| T |
5021920 |
gcttgctcatttgggggttgttcgccttgttcatcttcaacgtcattattgtaagacaattccatacctaaagcatcagcgaccatatcattcatcatgt |
5022019 |
T |
|
| Q |
218 |
tgaattg |
224 |
Q |
| |
|
||||||| |
|
|
| T |
5022020 |
tgaattg |
5022026 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 289 - 374
Target Start/End: Complemental strand, 34608911 - 34608826
Alignment:
| Q |
289 |
gaagcttgtgcattgacccctaccccaaaattctgaaacatttcaccattatatgtccaaacccaataattaggcataaaaccaac |
374 |
Q |
| |
|
||||||||||||||||| || ||||||||||||||||| |||||| ||||| ||||||||||||||| ||||||||| ||||| |
|
|
| T |
34608911 |
gaagcttgtgcattgactcccaccccaaaattctgaaattgttcaccgttataaatccaaacccaataatcaggcataaatccaac |
34608826 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 18 - 224
Target Start/End: Original strand, 22124813 - 22125019
Alignment:
| Q |
18 |
cttatgagataaaagccacacacacatagatagcttagagtgcgaagacccttcatacaaaggtgtattactttcactcaacaatcggtaaaatctttgc |
117 |
Q |
| |
|
|||||||| |||||| | |||||||| |||| ||| || |||| | |||||||| ||| || ||||| |||| ||||||| ||||||||| || |
|
|
| T |
22124813 |
cttatgagctaaaagtctgacacacattgataactttgattgcgtacacccttcaaacagtgggacattacattcattcaacaacttgtaaaatctctgg |
22124912 |
T |
|
| Q |
118 |
gccttctcattcgggggttgttcctcttcatcatcttcaacatcttcaccgtaagacaattccacccctaaagcgtccgcaaccatatcatccatcatgt |
217 |
Q |
| |
|
|| | |||||| ||||||||||| ||| |||||||||| || | | ||||||||||||||| |||||||| || || |||||||||| |||||||| |
|
|
| T |
22124913 |
gcttgctcatttgggggttgttcgccttgttcatcttcaatgtcattattgtaagacaattccacacctaaagcatcagcgaccatatcattcatcatgt |
22125012 |
T |
|
| Q |
218 |
tgaattg |
224 |
Q |
| |
|
||||||| |
|
|
| T |
22125013 |
tgaattg |
22125019 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 289 - 374
Target Start/End: Original strand, 22125066 - 22125151
Alignment:
| Q |
289 |
gaagcttgtgcattgacccctaccccaaaattctgaaacatttcaccattatatgtccaaacccaataattaggcataaaaccaac |
374 |
Q |
| |
|
||||||||||||||||| || ||||||||||| ||||| |||||| ||||| ||||||||||||||| | ||||||| ||||| |
|
|
| T |
22125066 |
gaagcttgtgcattgactcccaccccaaaattttgaaattgttcaccgttataaatccaaacccaataatcatgcataaatccaac |
22125151 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 289 - 368
Target Start/End: Original strand, 5022073 - 5022152
Alignment:
| Q |
289 |
gaagcttgtgcattgacccctaccccaaaattctgaaacatttcaccattatatgtccaaacccaataattaggcataaa |
368 |
Q |
| |
|
||||||||||||||||| || ||||||||| | ||||| |||||| ||||| ||||||||||||||| | ||||||| |
|
|
| T |
5022073 |
gaagcttgtgcattgactcccaccccaaaaatttgaaattgttcaccgttataaatccaaacccaataatcaagcataaa |
5022152 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 370; Significance: 0; HSPs: 3)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 370; E-Value: 0
Query Start/End: Original strand, 1 - 407
Target Start/End: Original strand, 7303482 - 7303888
Alignment:
| Q |
1 |
ggattaagatagttcgacttatgagataaaagccacacacacatagatagcttagagtgcgaagacccttcatacaaaggtgtattactttcactcaaca |
100 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7303482 |
ggattaagataattcgacttatgagataaaagccacacacacatagatagcttagagtgcgaagacccttcatacaaaggtgtattactttcactcaaca |
7303581 |
T |
|
| Q |
101 |
atcggtaaaatctttgcgccttctcattcgggggttgttcctcttcatcatcttcaacatcttcaccgtaagacaattccacccctaaagcgtccgcaac |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
7303582 |
atcggtaaaatctttgcgccttctcattcgggggttgttcctcttcatcatcttcaacatcttcaccgtaagacaattccacccctaaagcatccgcaac |
7303681 |
T |
|
| Q |
201 |
catatcatccatcatgttgaattgatctgtgttgacatcttcattgtattccacatttgtttccacatttgttccaccatggctagtagaagcttgtgca |
300 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7303682 |
catatcatccatcatgttgaattgttctgtgttgacatcttcattgtattccacatttgtttccacatttgttccaccatggctagtagaagcttgtgca |
7303781 |
T |
|
| Q |
301 |
ttgacccctaccccaaaattctgaaacatttcaccattatatgtccaaacccaataattaggcataaaaccaacnnnnnnnaggtgtttcttcacatctc |
400 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
7303782 |
ttgacccctaccccaaaattctgaaacatttcaccattatatgtccaaatccaataattaggcataaaaccaactttttttaggtgtttcttcacatctc |
7303881 |
T |
|
| Q |
401 |
caggatc |
407 |
Q |
| |
|
||||||| |
|
|
| T |
7303882 |
caggatc |
7303888 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 370; E-Value: 0
Query Start/End: Original strand, 1 - 407
Target Start/End: Original strand, 18339365 - 18339771
Alignment:
| Q |
1 |
ggattaagatagttcgacttatgagataaaagccacacacacatagatagcttagagtgcgaagacccttcatacaaaggtgtattactttcactcaaca |
100 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18339365 |
ggattaagataattcgacttatgagataaaagccacacacacatagatagcttagagtgcgaagacccttcatacaaaggtgtattactttcactcaaca |
18339464 |
T |
|
| Q |
101 |
atcggtaaaatctttgcgccttctcattcgggggttgttcctcttcatcatcttcaacatcttcaccgtaagacaattccacccctaaagcgtccgcaac |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
18339465 |
atcggtaaaatctttgcgccttctcattcgggggttgttcctcttcatcatcttcaacatcttcaccataagacaattccacccctaaagcgtccgcaac |
18339564 |
T |
|
| Q |
201 |
catatcatccatcatgttgaattgatctgtgttgacatcttcattgtattccacatttgtttccacatttgttccaccatggctagtagaagcttgtgca |
300 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18339565 |
catatcatccatcatgttgaattgttctgtgttgacatcttcattgtattccacatttgtttccacatttgttccaccatggctagtagaagcttgtgca |
18339664 |
T |
|
| Q |
301 |
ttgacccctaccccaaaattctgaaacatttcaccattatatgtccaaacccaataattaggcataaaaccaacnnnnnnnaggtgtttcttcacatctc |
400 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | |
|
|
| T |
18339665 |
ttgacccctaccccaaaattctgaaacatttcaccattatatgtccaaacccaataattaggcataaaaccaactttttttaggtgtttcttcacatccc |
18339764 |
T |
|
| Q |
401 |
caggatc |
407 |
Q |
| |
|
||||||| |
|
|
| T |
18339765 |
caggatc |
18339771 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 289 - 374
Target Start/End: Original strand, 6052765 - 6052850
Alignment:
| Q |
289 |
gaagcttgtgcattgacccctaccccaaaattctgaaacatttcaccattatatgtccaaacccaataattaggcataaaaccaac |
374 |
Q |
| |
|
||||||||||||||||||||| |||||||||| ||||| |||||| ||||| |||||||||||||||||||||||| ||||| |
|
|
| T |
6052765 |
gaagcttgtgcattgacccctgccccaaaattttgaaattgttcaccgttataaacccaaacccaataattaggcataaatccaac |
6052850 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 363; Significance: 0; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 363; E-Value: 0
Query Start/End: Original strand, 8 - 407
Target Start/End: Complemental strand, 13510272 - 13509873
Alignment:
| Q |
8 |
gatagttcgacttatgagataaaagccacacacacatagatagcttagagtgcgaagacccttcatacaaaggtgtattactttcactcaacaatcggta |
107 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13510272 |
gataattcgacttatgagataaaagccacacacacatagatagcttagagtgcgaagacccttcatacaaaggtgtattactttcactcaacaatcggta |
13510173 |
T |
|
| Q |
108 |
aaatctttgcgccttctcattcgggggttgttcctcttcatcatcttcaacatcttcaccgtaagacaattccacccctaaagcgtccgcaaccatatca |
207 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
13510172 |
aaatctttgcgccttctcattcgggggttgttcctcttcatcatcttcaacatcttcaccgtaagacaattccacccctaaagcatccgcaaccatatca |
13510073 |
T |
|
| Q |
208 |
tccatcatgttgaattgatctgtgttgacatcttcattgtattccacatttgtttccacatttgttccaccatggctagtagaagcttgtgcattgaccc |
307 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
13510072 |
tccatcatgttgaattgttctgtgttgacatcttcattgtattccacatttgtttccacatttgtttcaccatggctagtagaagcttgtgcattgaccc |
13509973 |
T |
|
| Q |
308 |
ctaccccaaaattctgaaacatttcaccattatatgtccaaacccaataattaggcataaaaccaacnnnnnnnaggtgtttcttcacatctccaggatc |
407 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
13509972 |
ctaccccaaaattctgaaacatttcaccattatatgtccaaacccaataattaggcataaaaccaactttttttaggtgtttcttcacatctccaggatc |
13509873 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 162 - 407
Target Start/End: Original strand, 4446853 - 4447098
Alignment:
| Q |
162 |
ttcaccgtaagacaattccacccctaaagcgtccgcaaccatatcatccatcatgttgaattgatctgtgttgacatcttcattgtattccacatttgtt |
261 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
4446853 |
ttcaccgtaagacaattccacccctaaagcatccgcaaccatatcatccatcatgttgaattgttctgtgttgacatcttcattgtattccacatttgtt |
4446952 |
T |
|
| Q |
262 |
tccacatttgttccaccatggctagtagaagcttgtgcattgacccctaccccaaaattctgaaacatttcaccattatatgtccaaacccaataattag |
361 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4446953 |
tccacatttgtttcaccatggctagtagaagcttgtgcattgacccctaccccaaaattctgaaacatttcaccattatatgtccaaacccaataattag |
4447052 |
T |
|
| Q |
362 |
gcataaaaccaacnnnnnnnaggtgtttcttcacatctccaggatc |
407 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
4447053 |
gcataaaaccaactttttttaggtgtttcttcacatctccaggatc |
4447098 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 63; Significance: 3e-27; HSPs: 4)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 18 - 224
Target Start/End: Complemental strand, 15742507 - 15742301
Alignment:
| Q |
18 |
cttatgagataaaagccacacacacatagatagcttagagtgcgaagacccttcatacaaaggtgtattactttcactcaacaatcggtaaaatctttgc |
117 |
Q |
| |
|
|||||||| |||||| | |||||||| |||| ||| || |||| | |||||||| ||| || ||||| |||||||||||| ||||||||||||| |
|
|
| T |
15742507 |
cttatgagctaaaagtctgacacacattgataactttgattgcgtacacccttcaaacagcgggacattacattcactcaacaactggtaaaatctttgg |
15742408 |
T |
|
| Q |
118 |
gccttctcattcgggggttgttcctcttcatcatcttcaacatcttcaccgtaagacaattccacccctaaagcgtccgcaaccatatcatccatcatgt |
217 |
Q |
| |
|
|| | |||||| ||||||| ||| ||| |||||||||||||| ||| ||||||||||||||| |||||||| || || |||||||||| |||||||| |
|
|
| T |
15742407 |
gcttgctcatttgggggttcttcaccttgttcatcttcaacatcatcattgtaagacaattccacacctaaagcatcagcgaccatatcattcatcatgt |
15742308 |
T |
|
| Q |
218 |
tgaattg |
224 |
Q |
| |
|
||||||| |
|
|
| T |
15742307 |
tgaattg |
15742301 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 18 - 224
Target Start/End: Complemental strand, 28954048 - 28953842
Alignment:
| Q |
18 |
cttatgagataaaagccacacacacatagatagcttagagtgcgaagacccttcatacaaaggtgtattactttcactcaacaatcggtaaaatctttgc |
117 |
Q |
| |
|
|||||||| |||||| | |||||||| |||| ||| || |||| | |||||||| ||| || ||||| |||| ||||||| ||||||||| || |
|
|
| T |
28954048 |
cttatgagctaaaagtctgacacacattgataactttgattgcgtacacccttcaaacagtgggacattacattcattcaacaactcgtaaaatctctgg |
28953949 |
T |
|
| Q |
118 |
gccttctcattcgggggttgttcctcttcatcatcttcaacatcttcaccgtaagacaattccacccctaaagcgtccgcaaccatatcatccatcatgt |
217 |
Q |
| |
|
|| | |||||| ||||||||||| ||| ||||||||||| || | | ||||||||||||||| |||||||| || || |||||||||| |||||||| |
|
|
| T |
28953948 |
gcttgctcatttgggggttgttcgccttgttcatcttcaacgtcattattgtaagacaattccacacctaaagcatcagcgaccatatcattcatcatgt |
28953849 |
T |
|
| Q |
218 |
tgaattg |
224 |
Q |
| |
|
||||||| |
|
|
| T |
28953848 |
tgaattg |
28953842 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 291 - 374
Target Start/End: Complemental strand, 28953793 - 28953710
Alignment:
| Q |
291 |
agcttgtgcattgacccctaccccaaaattctgaaacatttcaccattatatgtccaaacccaataattaggcataaaaccaac |
374 |
Q |
| |
|
||||||||||||||| || ||||||||||| ||||| |||||| ||||| ||||||||||||||| | ||||||| ||||| |
|
|
| T |
28953793 |
agcttgtgcattgactcccaccccaaaattttgaaattgttcaccgttataaatccaaacccaataatcaagcataaatccaac |
28953710 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 289 - 374
Target Start/End: Complemental strand, 15742269 - 15742184
Alignment:
| Q |
289 |
gaagcttgtgcattgacccctaccccaaaattctgaaacatttcaccattatatgtccaaacccaataattaggcataaaaccaac |
374 |
Q |
| |
|
||||||||||||||||| || |||||||||| ||||| |||||| ||||| |||||||||||||| ||||||||| ||||| |
|
|
| T |
15742269 |
gaagcttgtgcattgactcccgccccaaaattttgaaattgttcaccgttataaatccaaacccaataaacaggcataaatccaac |
15742184 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0029 (Bit Score: 61; Significance: 5e-26; HSPs: 2)
Name: scaffold0029
Description:
Target: scaffold0029; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 84 - 224
Target Start/End: Original strand, 58973 - 59113
Alignment:
| Q |
84 |
attactttcactcaacaatcggtaaaatctttgcgccttctcattcgggggttgttcctcttcatcatcttcaacatcttcaccgtaagacaattccacc |
183 |
Q |
| |
|
||||| |||||||||||| ||||||||||||| || | |||||| ||||||| ||| ||| |||||||||||||| ||| ||||||||||||||| |
|
|
| T |
58973 |
attacattcactcaacaactggtaaaatctttgggcttgctcatttgggggttcttcaccttgttcatcttcaacatcatcattgtaagacaattccaca |
59072 |
T |
|
| Q |
184 |
cctaaagcgtccgcaaccatatcatccatcatgttgaattg |
224 |
Q |
| |
|
|||||||| || || |||||||||| ||||||||||||||| |
|
|
| T |
59073 |
cctaaagcatcagcgaccatatcattcatcatgttgaattg |
59113 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0029; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 289 - 374
Target Start/End: Original strand, 59145 - 59230
Alignment:
| Q |
289 |
gaagcttgtgcattgacccctaccccaaaattctgaaacatttcaccattatatgtccaaacccaataattaggcataaaaccaac |
374 |
Q |
| |
|
||||||||||||||||| || |||||||||| |||||| |||||| ||||| ||||||||||||||| ||||||||| ||||| |
|
|
| T |
59145 |
gaagcttgtgcattgactcccgccccaaaattttgaaactgttcaccgttataaatccaaacccaataatcaggcataaatccaac |
59230 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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