View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5152_low_2 (Length: 240)

Name: NF5152_low_2
Description: NF5152
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5152_low_2
NF5152_low_2
[»] chr3 (18 HSPs)
chr3 (19-223)||(5160208-5160408)
chr3 (19-185)||(5156178-5156341)
chr3 (19-223)||(46479723-46479924)
chr3 (19-197)||(51943823-51943998)
chr3 (19-185)||(46483981-46484144)
chr3 (28-223)||(46473871-46474063)
chr3 (28-223)||(47414184-47414376)
chr3 (135-222)||(45883727-45883814)
chr3 (102-220)||(46236791-46236909)
chr3 (103-185)||(45902968-45903050)
chr3 (100-185)||(46490720-46490805)
chr3 (103-185)||(46526454-46526536)
chr3 (100-185)||(46497959-46498044)
chr3 (109-215)||(46531939-46532045)
chr3 (103-185)||(46549016-46549098)
chr3 (103-185)||(47397337-47397419)
chr3 (19-56)||(46549142-46549179)
chr3 (148-220)||(46554178-46554250)
[»] chr4 (3 HSPs)
chr4 (19-218)||(35162372-35162567)
chr4 (19-220)||(35155351-35155549)
chr4 (147-223)||(15556070-15556146)
[»] chr8 (3 HSPs)
chr8 (100-184)||(9692748-9692832)
chr8 (147-220)||(9675690-9675763)
chr8 (100-222)||(21464182-21464304)
[»] chr2 (3 HSPs)
chr2 (71-185)||(20359109-20359223)
chr2 (71-185)||(20144599-20144713)
chr2 (71-185)||(20169061-20169175)


Alignment Details
Target: chr3 (Bit Score: 143; Significance: 3e-75; HSPs: 18)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 19 - 223
Target Start/End: Original strand, 5160208 - 5160408
Alignment:
Q  19 caccttttgaatggcagctcggtcaaggttcccttcatgacgaccagaaaggagatgcagtttattaaagcttataacgactttaaagttcttcgtcttc 118  Q
    |||||||||||||| ||||| ||||||||||||||||||||   |||  ||||||  ||||||||| |||||||| ||||||||||||||||||||||||    
T  5160208 caccttttgaatgg-agctcagtcaaggttcccttcatgac---cagcgaggagaatcagtttattgaagcttatgacgactttaaagttcttcgtcttc 5160303  T
Q  119 cgtataagaaaggcaaagataagcttccattctctatgtacattttccttccaaatgcaaaagatggcttgtcggctttggttaataaggtggcttctga 218  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  5160304 cgtataagaaaggcaaagataagcgtccattctctatgtacattttccttccaaatgcaaaagatggcttgtcgactttggttaagaaggtggcttctga 5160403  T
Q  219 atctg 223  Q
    |||||    
T  5160404 atctg 5160408  T

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Target: chr3; HSP #2
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 19 - 185
Target Start/End: Original strand, 5156178 - 5156341
Alignment:
Q  19 caccttttgaatggcagctcggtcaaggttcccttcatgacgaccagaaaggagatgcagtttattaaagcttataacgactttaaagttcttcgtcttc 118  Q
    |||||||||||||||||||||||||||||||||||||||||   |||  ||||||  ||||||||| ||||||||   | ||||||||||||||||||||    
T  5156178 caccttttgaatggcagctcggtcaaggttcccttcatgac---cagcgaggagaatcagtttattgaagcttatggtggctttaaagttcttcgtcttc 5156274  T
Q  119 cgtataagaaaggcaaagataagcttccattctctatgtacattttccttccaaatgcaaaagatgg 185  Q
    ||||||| |||||||||||||||| || |||||||||||||||||| ||||||||||| ||||||||    
T  5156275 cgtataaaaaaggcaaagataagcgtcgattctctatgtacatttttcttccaaatgctaaagatgg 5156341  T

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Target: chr3; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 19 - 223
Target Start/End: Original strand, 46479723 - 46479924
Alignment:
Q  19 caccttttgaatggcagctcggtcaaggttcccttcatgacgaccagaaaggagatgcagtttattaaagcttataacgactttaaagttcttcgtcttc 118  Q
    |||||||||||||| ||| | ||||||||||||||||||||   ||| ||| ||| ||||||||||| ||||| | | |  |||||||||||  ||||||    
T  46479723 caccttttgaatggtagcccagtcaaggttcccttcatgac---cagcaagaagaagcagtttattagagcttttgatggttttaaagttctcggtcttc 46479819  T
Q  119 cgtataagaaaggcaaagataagcttccattctctatgtacattttccttccaaatgcaaaagatggcttgtcggctttggttaataaggtggcttctga 218  Q
    | |||||| ||||| ||||||||| || |||| | |||||| |||| |||||||||||||||||||| ||| | ||||||||  | ||||||||||||||    
T  46479820 cttataagcaaggcgaagataagcgtcaattcaccatgtacttttttcttccaaatgcaaaagatgggttggcagctttggtcgaaaaggtggcttctga 46479919  T
Q  219 atctg 223  Q
    |||||    
T  46479920 atctg 46479924  T

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Target: chr3; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 19 - 197
Target Start/End: Original strand, 51943823 - 51943998
Alignment:
Q  19 caccttttgaatggcagctcggtcaaggttcccttcatgacgaccagaaaggagatgcagtttattaaagcttataacgactttaaagttcttcgtcttc 118  Q
    |||||| | ||||| ||||| ||||||||||||||||||||   ||| ||  ||| |||||||||| ||| |||| | || ||||||||||||| |||||    
T  51943823 caccttctaaatggtagctcagtcaaggttcccttcatgac---cagcaataagaagcagtttattgaagtttatgatgattttaaagttcttcatcttc 51943919  T
Q  119 cgtataagaaaggcaaagataagcttccattctctatgtacattttccttccaaatgcaaaagatggcttgtcggcttt 197  Q
    | |||||||||||  |||||||||  | ||||||||||||  |||| |||||||||||||||||||| ||||| |||||    
T  51943920 cttataagaaaggtgaagataagcgccaattctctatgtatttttttcttccaaatgcaaaagatgggttgtcagcttt 51943998  T

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Target: chr3; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 19 - 185
Target Start/End: Original strand, 46483981 - 46484144
Alignment:
Q  19 caccttttgaatggcagctcggtcaaggttcccttcatgacgaccagaaaggagatgcagtttattaaagcttataacgactttaaagttcttcgtcttc 118  Q
    |||||| | ||||||||||| |||||||||||||| ||||| | ||   || ||| ||||||||||| ||||| | | |  |||||||||||| ||||||    
T  46483981 caccttctcaatggcagctcagtcaaggttccctttatgactagca---agaagaagcagtttattagagcttttgatggttttaaagttcttggtcttc 46484077  T
Q  119 cgtataagaaaggcaaagataagcttccattctctatgtacattttccttccaaatgcaaaagatgg 185  Q
    | |||||| ||||| ||||||||| ||  ||| |||||||| |||| ||||||||||||||||||||    
T  46484078 cttataagcaaggcgaagataagcgtcgtttcactatgtacttttttcttccaaatgcaaaagatgg 46484144  T

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Target: chr3; HSP #6
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 28 - 223
Target Start/End: Original strand, 46473871 - 46474063
Alignment:
Q  28 aatggcagctcggtcaaggttcccttcatgacgaccagaaaggagatgcagtttattaaagcttataacgactttaaagttcttcgtcttccgtataaga 127  Q
    ||||||||||| || |||||| |||| ||||| | ||   || ||| ||||||||||| ||||| | | |  |||||||||||| ||||||| ||||||     
T  46473871 aatggcagctcagttaaggtttcctttatgactagca---agaagaagcagtttattagagcttttgatggttttaaagttcttggtcttccttataagc 46473967  T
Q  128 aaggcaaagataagcttccattctctatgtacattttccttccaaatgcaaaagatggcttgtcggctttggttaataaggtggcttctgaatctg 223  Q
    ||||| ||||||||| ||  ||| |||||||| |||| ||||||||||||||||||||  |  |   ||||||| | |||||||||||||||||||    
T  46473968 aaggcgaagataagcgtcgtttcactatgtacttttttcttccaaatgcaaaagatgggcttccaagtttggttgaaaaggtggcttctgaatctg 46474063  T

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Target: chr3; HSP #7
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 28 - 223
Target Start/End: Complemental strand, 47414376 - 47414184
Alignment:
Q  28 aatggcagctcggtcaaggttcccttcatgacgaccagaaaggagatgcagtttattaaagcttataacgactttaaagttcttcgtcttccgtataaga 127  Q
    ||||| ||||| |||||||||||||||||||| |   ||   |||| ||||||||||  ||||| | | || |||||||||||| | ||||| ||||| |    
T  47414376 aatggaagctcagtcaaggttcccttcatgaccaatgga---gagaagcagtttattggagcttttgatgattttaaagttctttgccttccttataata 47414280  T
Q  128 aaggcaaagataagcttccattctctatgtacattttccttccaaatgcaaaagatggcttgtcggctttggttaataaggtggcttctgaatctg 223  Q
    ||||  |||||| ||    |||||||||||||||||| ||||||||  ||| ||||||  |||| ||||||||| | |||||||||||||||||||    
T  47414279 aaggagaagatacgcggaaattctctatgtacatttttcttccaaacacaagagatggactgtcagctttggttgagaaggtggcttctgaatctg 47414184  T

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Target: chr3; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 135 - 222
Target Start/End: Complemental strand, 45883814 - 45883727
Alignment:
Q  135 agataagcttccattctctatgtacattttccttccaaatgcaaaagatggcttgtcggctttggttaataaggtggcttctgaatct 222  Q
    |||||||| || ||||||||||||| |||| ||||||||||||||||||||  |||| ||||||||  | ||||||||||||||||||    
T  45883814 agataagcgtcgattctctatgtacttttttcttccaaatgcaaaagatggactgtcagctttggtcgagaaggtggcttctgaatct 45883727  T

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Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 102 - 220
Target Start/End: Complemental strand, 46236909 - 46236791
Alignment:
Q  102 taaagttcttcgtcttccgtataagaaaggcaaagataagcttccattctctatgtacattttccttccaaatgcaaaagatggcttgtcggctttggtt 201  Q
    ||||||||||  |||||| |||||  ||||||||||| ||  || |||||||||||| ||||| |||||| ||||||||||||| |||||  | ||||||    
T  46236909 taaagttctttatcttccttataatcaaggcaaagatgagtgtcaattctctatgtatatttttcttccagatgcaaaagatgggttgtcaaccttggtt 46236810  T
Q  202 aataaggtggcttctgaat 220  Q
     | ||| ||||||||||||    
T  46236809 gagaagctggcttctgaat 46236791  T

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Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 103 - 185
Target Start/End: Original strand, 45902968 - 45903050
Alignment:
Q  103 aaagttcttcgtcttccgtataagaaaggcaaagataagcttccattctctatgtacattttccttccaaatgcaaaagatgg 185  Q
    ||||| ||||||||||| ||| || ||||  ||||||||| || |||||||||||| ||||| |||||||| |||||||||||    
T  45902968 aaagtacttcgtcttccttatgagcaaggagaagataagcgtcaattctctatgtatatttttcttccaaaagcaaaagatgg 45903050  T

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Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 100 - 185
Target Start/End: Original strand, 46490720 - 46490805
Alignment:
Q  100 tttaaagttcttcgtcttccgtataagaaaggcaaagataagcttccattctctatgtacattttccttccaaatgcaaaagatgg 185  Q
    |||||||||||| | ||||| |||||| ||||| ||||||||| |  |||  |||||||| |||| ||||||||||||||||||||    
T  46490720 tttaaagttcttggccttccttataagcaaggcgaagataagcgtgaatttactatgtacttttttcttccaaatgcaaaagatgg 46490805  T

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Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 103 - 185
Target Start/End: Complemental strand, 46526536 - 46526454
Alignment:
Q  103 aaagttcttcgtcttccgtataagaaaggcaaagataagcttccattctctatgtacattttccttccaaatgcaaaagatgg 185  Q
    ||||| || |||||||| |||||| ||||  ||||||||| || |||||||||||||||||| |||||||  |||| ||||||    
T  46526536 aaagtactccgtcttccttataagcaaggagaagataagcgtcaattctctatgtacatttttcttccaagagcaagagatgg 46526454  T

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Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 100 - 185
Target Start/End: Original strand, 46497959 - 46498044
Alignment:
Q  100 tttaaagttcttcgtcttccgtataagaaaggcaaagataagcttccattctctatgtacattttccttccaaatgcaaaagatgg 185  Q
    |||||||||||| | ||||| |||||| ||||| |||| |||| || |||  | |||||| |||| ||||||||||||||||||||    
T  46497959 tttaaagttcttggccttccttataagcaaggcgaagacaagcgtcaatttacgatgtacttttttcttccaaatgcaaaagatgg 46498044  T

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Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 215
Target Start/End: Original strand, 46531939 - 46532045
Alignment:
Q  109 cttcgtcttccgtataagaaaggcaaagataagcttccattctctatgtacattttccttccaaatgcaaaagatggcttgtcggctttggttaataagg 208  Q
    ||||||||||| |||||| ||||||| ||||  | || ||||||||||||| |||| |||||  ||||| ||||||| ||||  |||||| || | || |    
T  46531939 cttcgtcttccttataagcaaggcaacgatattcgtcaattctctatgtacttttttcttcccgatgcacaagatggattgttagctttgattgagaaag 46532038  T
Q  209 tggcttc 215  Q
    |||||||    
T  46532039 tggcttc 46532045  T

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Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 185
Target Start/End: Complemental strand, 46549098 - 46549016
Alignment:
Q  103 aaagttcttcgtcttccgtataagaaaggcaaagataagcttccattctctatgtacattttccttccaaatgcaaaagatgg 185  Q
    |||||||||  |||||| |||||  |||| |||||||| |  | ||||||||||||| |||| ||||||||| ||||||||||    
T  46549098 aaagttctttatcttccttataaataaggaaaagataaacgacaattctctatgtacttttttcttccaaatacaaaagatgg 46549016  T

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Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 185
Target Start/End: Complemental strand, 47397419 - 47397337
Alignment:
Q  103 aaagttcttcgtcttccgtataagaaaggcaaagataagcttccattctctatgtacattttccttccaaatgcaaaagatgg 185  Q
    ||||| ||||||||| | |||| | ||||  |||||||||  |  ||||| ||||||||||| ||||||||||||||||||||    
T  47397419 aaagtacttcgtctttcttataggcaaggtgaagataagcgccatttctccatgtacatttttcttccaaatgcaaaagatgg 47397337  T

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Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 56
Target Start/End: Complemental strand, 46549179 - 46549142
Alignment:
Q  19 caccttttgaatggcagctcggtcaaggttcccttcat 56  Q
    |||||| | |||||||||||||||||||||||||||||    
T  46549179 caccttctcaatggcagctcggtcaaggttcccttcat 46549142  T

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Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 220
Target Start/End: Complemental strand, 46554250 - 46554178
Alignment:
Q  148 ttctctatgtacattttccttccaaatgcaaaagatggcttgtcggctttggttaataaggtggcttctgaat 220  Q
    |||||||||||| |||| |||||  ||||||||||||| ||||| |||||| || | || |||||||| ||||    
T  46554250 ttctctatgtactttttacttcccgatgcaaaagatgggttgtcagctttgattgagaaagtggcttcggaat 46554178  T

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Target: chr4 (Bit Score: 69; Significance: 4e-31; HSPs: 3)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 19 - 218
Target Start/End: Original strand, 35162372 - 35162567
Alignment:
Q  19 caccttttgaatggcagctcggtcaaggttcccttcatgacgaccagaaaggagatgcagtttattaaagcttataacgactttaaagttcttcgtcttc 118  Q
    |||||| ||||||| ||||| |||||||||||||||||||| ||||  |    ||| |||||||||| ||||| | | |  |||||||||||||||||||    
T  35162372 caccttctgaatggaagctcagtcaaggttcccttcatgactacca--accttgat-cagtttattagagcttttgatggttttaaagttcttcgtcttc 35162468  T
Q  119 cgtataagaaaggcaaagataagcttccattctctatgtacattttccttccaaatgcaaaagatggcttgtcggctttggttaataaggtggcttctga 218  Q
    | |||||| |||| |||||| |||    ||||||||||||||||||| |||||||||||||||||||| |||| ||||||||| | ||||||||||||||    
T  35162469 cttataagcaaggaaaagatgagcggaaattctctatgtacattttc-ttccaaatgcaaaagatggcctgtcagctttggttgagaaggtggcttctga 35162567  T

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Target: chr4; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 19 - 220
Target Start/End: Original strand, 35155351 - 35155549
Alignment:
Q  19 caccttttgaatggcagctcggtcaaggttcccttcatgacgaccagaaaggagatgcagtttattaaagcttataacgactttaaagttcttcgtcttc 118  Q
    |||||| ||||||||||||| |||||||||||||||||||| | |||    ||    || ||||||| ||||| | | |  |||||||||||||||||||    
T  35155351 caccttctgaatggcagctcagtcaaggttcccttcatgaccagcagccttgat---caatttattagagcttttgatggttttaaagttcttcgtcttc 35155447  T
Q  119 cgtataagaaaggcaaagataagcttccattctctatgtacattttccttccaaatgcaaaagatggcttgtcggctttggttaataaggtggcttctga 218  Q
    |||||||| |||| |||||| |||    |||||||||||||||||| ||||||||||||||||||||  | || ||||||||| | ||||||||||||||    
T  35155448 cgtataagcaaggaaaagatgagcggaaattctctatgtacatttttcttccaaatgcaaaagatggactatcagctttggttgagaaggtggcttctga 35155547  T

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Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 223
Target Start/End: Original strand, 15556070 - 15556146
Alignment:
Q  147 attctctatgtacattttccttccaaatgcaaaagatggcttgtcggctttggttaataaggtggcttctgaatctg 223  Q
    ||||||||| ||| || | |||||| |||||||||||||  | |||||||||||| | ||||||||||| |||||||    
T  15556070 attctctatctactttattcttccagatgcaaaagatggactctcggctttggttgaaaaggtggcttcagaatctg 15556146  T

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Target: chr8 (Bit Score: 49; Significance: 4e-19; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 100 - 184
Target Start/End: Complemental strand, 9692832 - 9692748
Alignment:
Q  100 tttaaagttcttcgtcttccgtataagaaaggcaaagataagcttccattctctatgtacattttccttccaaatgcaaaagatg 184  Q
    |||||||||||||||||||| |||||  |||| ||| ||||||  | |||||||||||||||||| |||||||||||||||||||    
T  9692832 tttaaagttcttcgtcttccttataattaaggaaaaaataagcgacaattctctatgtacatttttcttccaaatgcaaaagatg 9692748  T

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Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 147 - 220
Target Start/End: Complemental strand, 9675763 - 9675690
Alignment:
Q  147 attctctatgtacattttccttccaaatgcaaaagatggcttgtcggctttggttaataaggtggcttctgaat 220  Q
    |||||||||||||||||| |||||||||||||||| |||  | |||||| ||||| | ||||||||||||||||    
T  9675763 attctctatgtacatttttcttccaaatgcaaaaggtggactatcggctatggttgaaaaggtggcttctgaat 9675690  T

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Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 100 - 222
Target Start/End: Complemental strand, 21464304 - 21464182
Alignment:
Q  100 tttaaagttcttcgtcttccgtataagaaaggcaaagataagcttccattctctatgtacattttccttccaaatgcaaaagatggcttgtcggctttgg 199  Q
    |||||||| ||||||||||| |||| | ||||  |||| || | || |||||| || ||| |||| |||||  ||||||||||||| ||||  ||||||     
T  21464304 tttaaagtccttcgtcttccttatacgcaaggtgaagacaaacatcgattctcaatttacttttttcttcctgatgcaaaagatggattgttagctttga 21464205  T
Q  200 ttaataaggtggcttctgaatct 222  Q
    |||| ||||| ||||| ||||||    
T  21464204 ttaagaaggttgcttccgaatct 21464182  T

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Target: chr2 (Bit Score: 47; Significance: 6e-18; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 71 - 185
Target Start/End: Original strand, 20359109 - 20359223
Alignment:
Q  71 agatgcagtttattaaagcttataacgactttaaagttcttcgtcttccgtataagaaaggcaaagataagcttccattctctatgtacattttccttcc 170  Q
    |||||||||||||| |||||||| |||  | |||||||||||||||||| ||||| |||||  |||||| || || |||||||||||| |||||  | ||    
T  20359109 agatgcagtttattgaagcttatgacggttctaaagttcttcgtcttccttataaaaaaggtcaagatacgcgtcaattctctatgtatatttttttgcc 20359208  T
Q  171 aaatgcaaaagatgg 185  Q
    ||| |||||||||||    
T  20359209 aaacgcaaaagatgg 20359223  T

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Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 71 - 185
Target Start/End: Original strand, 20144599 - 20144713
Alignment:
Q  71 agatgcagtttattaaagcttataacgactttaaagttcttcgtcttccgtataagaaaggcaaagataagcttccattctctatgtacattttccttcc 170  Q
    |||||||||||||| |||||||| |||  | |||||||||||||||||| ||||| |||||  |||||| || || |||||||||||| |||||  | ||    
T  20144599 agatgcagtttattgaagcttatgacggttctaaagttcttcgtcttccttataaaaaaggtcaagatacgcgtcaattctctatgtatatttttttgcc 20144698  T
Q  171 aaatgcaaaagatgg 185  Q
     || |||||||||||    
T  20144699 taacgcaaaagatgg 20144713  T

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Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 71 - 185
Target Start/End: Complemental strand, 20169175 - 20169061
Alignment:
Q  71 agatgcagtttattaaagcttataacgactttaaagttcttcgtcttccgtataagaaaggcaaagataagcttccattctctatgtacattttccttcc 170  Q
    ||||||| |||||| |||||||| |||  | |||||||||||||||||| ||||| |||||  |||||| || || |||||||||||| |||||  | ||    
T  20169175 agatgcaatttattgaagcttatgacggttctaaagttcttcgtcttccttataaaaaaggtcaagatacgcgtcaattctctatgtatatttttttgcc 20169076  T
Q  171 aaatgcaaaagatgg 185  Q
    ||| |||||||||||    
T  20169075 aaacgcaaaagatgg 20169061  T

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