View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5157_low_4 (Length: 286)
Name: NF5157_low_4
Description: NF5157
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5157_low_4 |
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Alignment Details
Target: chr4 (Bit Score: 254; Significance: 1e-141; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 10 - 271
Target Start/End: Original strand, 34034884 - 34035145
Alignment:
| Q |
10 |
aatatgcggattttatggcagaaatgggagcaattaccgtgggtagtgtaacaatgtttccaaagccactaccttacttatcttctttactttctagtga |
109 |
Q |
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| T |
34034884 |
aatatgcggattttatggcagaaatgggagcaattaccgtgggtagtgtaacaatgtttccaaagccactaccttacttatcttctttactttctagtga |
34034983 |
T |
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| Q |
110 |
tgccaagagagcaacatatgtaagagcataatttatagtttcttttctcagttgttgttttaaaattagcatcctatacaactgtaaataattgtttctc |
209 |
Q |
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||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34034984 |
tgccaagagagcaacatatattagagcataatttatagtttcttttctcagttgttgttttaaaattagcatcctatacaactgtaaataattgtttctc |
34035083 |
T |
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| Q |
210 |
ttagtaatagttaatttatatttattatggtgccttttggtgtaccatcttacagtaccttt |
271 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34035084 |
ttagtaatagttaatttatatttattatggtgccttttggtgtaccatcttacagtaccttt |
34035145 |
T |
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