View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF5158_high_20 (Length: 318)
Name: NF5158_high_20
Description: NF5158
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5158_high_20 |
 | |
|
| [»] scaffold0045 (1 HSPs) |
| | |
|
Alignment Details
Target: chr2 (Bit Score: 307; Significance: 1e-173; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 307; E-Value: 1e-173
Query Start/End: Original strand, 1 - 311
Target Start/End: Complemental strand, 34837958 - 34837648
Alignment:
| Q |
1 |
acggggttccggagttcctcatgtacagcggtgggcaacttcattcgtgaatctttaatcaagcccatgatgagtccaggaaaagctaggcgggtttttg |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34837958 |
acggggttccggagttcctcatgtacagcggtgggcaacttcattcgtgaatctttaatcaagcccatgatgagtccaggaaaagctaggcgggtttttg |
34837859 |
T |
|
| Q |
101 |
gctcactttttccttgaagggtgaccagccttaactcccatactaatgtgcgggctatgtcaaccttgaagcccttgagaatgtagtatatgagtgggca |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34837858 |
gctcactttttccttgaagggtgaccagccttaactcccatgctaatgtgcgggctatgtcaaccttgaagcccttgagaatgtagtatatgagtgggca |
34837759 |
T |
|
| Q |
201 |
tacatccacagtgcaatcggacaagtggctgttaggtctgacattgtgaaggataaacttcaggatgaatttgcaagttttgttcatgagtttatattgt |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34837758 |
tacatccacagtgcaatcggacaagtggctgttaggtctgacattgtgaaggataaacttcaggatgaatttgcaagttttgttcatgagtttatattgt |
34837659 |
T |
|
| Q |
301 |
gctctgtgatg |
311 |
Q |
| |
|
||||||||||| |
|
|
| T |
34837658 |
gctctgtgatg |
34837648 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 295; E-Value: 1e-166
Query Start/End: Original strand, 1 - 311
Target Start/End: Original strand, 2161116 - 2161426
Alignment:
| Q |
1 |
acggggttccggagttcctcatgtacagcggtgggcaacttcattcgtgaatctttaatcaagcccatgatgagtccaggaaaagctaggcgggtttttg |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2161116 |
acggggttccggagttcctcatgtacagcggtgggcaacttcattcgtgaatctttaatcaagcccatgatgagtccaggaaaagctaggcgggtttttg |
2161215 |
T |
|
| Q |
101 |
gctcactttttccttgaagggtgaccagccttaactcccatactaatgtgcgggctatgtcaaccttgaagcccttgagaatgtagtatatgagtgggca |
200 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2161216 |
gttcactttttccttgaagggtgaccagccttaactcccatgctaatgtgcgggctatgtcaaccttgaagcccttgagaatgtagtatatgagtgggca |
2161315 |
T |
|
| Q |
201 |
tacatccacagtgcaatcggacaagtggctgttaggtctgacattgtgaaggataaacttcaggatgaatttgcaagttttgttcatgagtttatattgt |
300 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2161316 |
tacatccacagtgcaatcggacaagtggctgttaggtctaacattgtgaaggataaatttcaggatgaatttgcaagttttgttcatgagtttatattgt |
2161415 |
T |
|
| Q |
301 |
gctctgtgatg |
311 |
Q |
| |
|
||||||||||| |
|
|
| T |
2161416 |
gctctgtgatg |
2161426 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 303; Significance: 1e-170; HSPs: 5)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 1 - 311
Target Start/End: Complemental strand, 4715244 - 4714934
Alignment:
| Q |
1 |
acggggttccggagttcctcatgtacagcggtgggcaacttcattcgtgaatctttaatcaagcccatgatgagtccaggaaaagctaggcgggtttttg |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4715244 |
acggggttccggagttcctcatgtacagcgatgggcaacttcattcgtgaatctttaatcaagcccatgatgagtccaggaaaagctaggcgggtttttg |
4715145 |
T |
|
| Q |
101 |
gctcactttttccttgaagggtgaccagccttaactcccatactaatgtgcgggctatgtcaaccttgaagcccttgagaatgtagtatatgagtgggca |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4715144 |
gctcactttttccttgaagggtgaccagccttaactcccatgctaatgtgcgggctatgtcaaccttgaagcccttgagaatgtagtatatgagtgggca |
4715045 |
T |
|
| Q |
201 |
tacatccacagtgcaatcggacaagtggctgttaggtctgacattgtgaaggataaacttcaggatgaatttgcaagttttgttcatgagtttatattgt |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4715044 |
tacatccacagtgcaatcggacaagtggctgttaggtctgacattgtgaaggataaacttcaggatgaatttgcaagttttgttcatgagtttatattgt |
4714945 |
T |
|
| Q |
301 |
gctctgtgatg |
311 |
Q |
| |
|
||||||||||| |
|
|
| T |
4714944 |
gctctgtgatg |
4714934 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 1 - 311
Target Start/End: Complemental strand, 4735050 - 4734740
Alignment:
| Q |
1 |
acggggttccggagttcctcatgtacagcggtgggcaacttcattcgtgaatctttaatcaagcccatgatgagtccaggaaaagctaggcgggtttttg |
100 |
Q |
| |
|
||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4735050 |
acgggattccggagttcctcatgtacagcgatgggcaacttcattcgtgaatctttaatcaagcccatgatgagtccaggaaaagctaggcgggtttttg |
4734951 |
T |
|
| Q |
101 |
gctcactttttccttgaagggtgaccagccttaactcccatactaatgtgcgggctatgtcaaccttgaagcccttgagaatgtagtatatgagtgggca |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4734950 |
gctcactttttccttgaagggtgaccagccttaactcccatgctaatgtgcgggctatgtcaaccttgaagcccttgagaatgtagtatatgagtgggca |
4734851 |
T |
|
| Q |
201 |
tacatccacagtgcaatcggacaagtggctgttaggtctgacattgtgaaggataaacttcaggatgaatttgcaagttttgttcatgagtttatattgt |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4734850 |
tacatccacagtgcaatcggacaagtggctgttaggtctgacattgtgaaggataaacttcaggatgaatttgcaagttttgttcatgagtttatattgt |
4734751 |
T |
|
| Q |
301 |
gctctgtgatg |
311 |
Q |
| |
|
||||||||||| |
|
|
| T |
4734750 |
gctctgtgatg |
4734740 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 295; E-Value: 1e-166
Query Start/End: Original strand, 1 - 311
Target Start/End: Complemental strand, 4709634 - 4709324
Alignment:
| Q |
1 |
acggggttccggagttcctcatgtacagcggtgggcaacttcattcgtgaatctttaatcaagcccatgatgagtccaggaaaagctaggcgggtttttg |
100 |
Q |
| |
|
||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4709634 |
acgggattccggagttcctcatgtacagcgatgggcaacttcattcgtgaatctttaatcaagcccatgatgagtccaggaaaagctaggcgggtttttg |
4709535 |
T |
|
| Q |
101 |
gctcactttttccttgaagggtgaccagccttaactcccatactaatgtgcgggctatgtcaaccttgaagcccttgagaatgtagtatatgagtgggca |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4709534 |
gctcactttttccttgaagggtgaccagccttaactcccatgctaatgtgcgggctatgtaaaccttgaagcccttgagaatgtagtatatgagtgggca |
4709435 |
T |
|
| Q |
201 |
tacatccacagtgcaatcggacaagtggctgttaggtctgacattgtgaaggataaacttcaggatgaatttgcaagttttgttcatgagtttatattgt |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4709434 |
tacatccacagtgcaatcggacaagtggctgttaggtctgacattgtgaaggataaacttcaggatgaatttgcaagttttgttcatgagtttatattgt |
4709335 |
T |
|
| Q |
301 |
gctctgtgatg |
311 |
Q |
| |
|
||||||||||| |
|
|
| T |
4709334 |
gctctgtgatg |
4709324 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 295; E-Value: 1e-166
Query Start/End: Original strand, 1 - 311
Target Start/End: Complemental strand, 7066390 - 7066080
Alignment:
| Q |
1 |
acggggttccggagttcctcatgtacagcggtgggcaacttcattcgtgaatctttaatcaagcccatgatgagtccaggaaaagctaggcgggtttttg |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7066390 |
acggggttccggagttcctcatgtacagcgatgggcaacttcattcgtgaatctttaatcaagcccatgatgagtccaggaaaagctaggcgggtttttg |
7066291 |
T |
|
| Q |
101 |
gctcactttttccttgaagggtgaccagccttaactcccatactaatgtgcgggctatgtcaaccttgaagcccttgagaatgtagtatatgagtgggca |
200 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7066290 |
gctcactttttccttggagggtgaccagccttaactcccatgctaatgtgcgggctatgtcaaccttgaagcccttgagaatgtagtatatgagtgggca |
7066191 |
T |
|
| Q |
201 |
tacatccacagtgcaatcggacaagtggctgttaggtctgacattgtgaaggataaacttcaggatgaatttgcaagttttgttcatgagtttatattgt |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7066190 |
tacatccacagtgcaatcggacaagtggctgttaggtctgacattgtgaaggataaacttcaagatgaatttgcaagttttgttcatgagtttatattgt |
7066091 |
T |
|
| Q |
301 |
gctctgtgatg |
311 |
Q |
| |
|
||||||||||| |
|
|
| T |
7066090 |
gctctgtgatg |
7066080 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 1 - 311
Target Start/End: Complemental strand, 4023343 - 4023033
Alignment:
| Q |
1 |
acggggttccggagttcctcatgtacagcggtgggcaacttcattcgtgaatctttaatcaagcccatgatgagtccaggaaaagctaggcgggtttttg |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4023343 |
acggggttccggagttcctcatgtacagcgatgggcaacttcattcgtgaatctttaatcaagcccatgatgagtccaggaaaagctaggcgggtttttg |
4023244 |
T |
|
| Q |
101 |
gctcactttttccttgaagggtgaccagccttaactcccatactaatgtgcgggctatgtcaaccttgaagcccttgagaatgtagtatatgagtgggca |
200 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4023243 |
gctcactttttccttggagggtgaccagccttaactcccatgctaatgtgcgggctatgtcaaccttgaagcccttgagaatgtagtatatgagtgggca |
4023144 |
T |
|
| Q |
201 |
tacatccacagtgcaatcggacaagtggctgttaggtctgacattgtgaaggataaacttcaggatgaatttgcaagttttgttcatgagtttatattgt |
300 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4023143 |
tacatccacagtgcaatcggacaagtggttgttaggtctgacattgtgaaggataaacttcaagatgaatttgcaagttttgttcatgagtttatattgt |
4023044 |
T |
|
| Q |
301 |
gctctgtgatg |
311 |
Q |
| |
|
||||||||||| |
|
|
| T |
4023043 |
gctctgtgatg |
4023033 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 299; Significance: 1e-168; HSPs: 4)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 1 - 311
Target Start/End: Complemental strand, 8189599 - 8189289
Alignment:
| Q |
1 |
acggggttccggagttcctcatgtacagcggtgggcaacttcattcgtgaatctttaatcaagcccatgatgagtccaggaaaagctaggcgggtttttg |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8189599 |
acggggttccggagttcctcatgtacagcgatgggcaacttcattcgtgaatctttaatcaagcccatgatgagtccaggaaaagctaggcgggtttttg |
8189500 |
T |
|
| Q |
101 |
gctcactttttccttgaagggtgaccagccttaactcccatactaatgtgcgggctatgtcaaccttgaagcccttgagaatgtagtatatgagtgggca |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8189499 |
gctcactttttccttgaagggtgaccagccttaactcccatgctaatgtgcgggctatgtcaaccttgaagcccttgagaatgtagtatatgagtgggca |
8189400 |
T |
|
| Q |
201 |
tacatccacagtgcaatcggacaagtggctgttaggtctgacattgtgaaggataaacttcaggatgaatttgcaagttttgttcatgagtttatattgt |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8189399 |
tacatccacagtgcaatcggacaagtggctgttaggtctgacattgtgaaggataaactttaggatgaatttgcaagttttgttcatgagtttatattgt |
8189300 |
T |
|
| Q |
301 |
gctctgtgatg |
311 |
Q |
| |
|
||||||||||| |
|
|
| T |
8189299 |
gctctgtgatg |
8189289 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 1 - 264
Target Start/End: Original strand, 14291227 - 14291490
Alignment:
| Q |
1 |
acggggttccggagttcctcatgtacagcggtgggcaacttcattcgtgaatctttaatcaagcccatgatgagtccaggaaaagctaggcgggtttttg |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14291227 |
acggggttccggagttcctcatgtacagcggtgggcaacttcattcgtgaatctttaatcaagcccatgatgagtccaggaaaagctaggcgggtttttg |
14291326 |
T |
|
| Q |
101 |
gctcactttttccttgaagggtgaccagccttaactcccatactaatgtgcgggctatgtcaaccttgaagcccttgagaatgtagtatatgagtgggca |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14291327 |
gctcactttttccttgaagggtgaccagccttaactcccatgctaatgtgcgggctatgttaaccttgaagcccttgagaatgtagtatatgagtgggca |
14291426 |
T |
|
| Q |
201 |
tacatccacagtgcaatcggacaagtggctgttaggtctgacattgtgaaggataaacttcagg |
264 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14291427 |
tacatccacagtgcaatcggacaagtggctgttaggtctgacattgtgaaggataaacttcagg |
14291490 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 3 - 304
Target Start/End: Original strand, 15944581 - 15944882
Alignment:
| Q |
3 |
ggggttccggagttcctcatgtacagcggtgggcaacttcattcgtgaatctttaatcaagcccatgatgagtccaggaaaagctaggcgggtttttggc |
102 |
Q |
| |
|
||||||||| | || |||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
15944581 |
ggggttccgaattttctcatgtacagcggtgggcatcttcatacgtgaatctttaatcaagcccatgatgagtccgggaaaagctaggcgggtttttggc |
15944680 |
T |
|
| Q |
103 |
tcactttttccttgaagggtgaccagccttaactcccatactaatgtgcgggctatgtcaaccttgaagcccttgagaatgtagtatatgagtgggcata |
202 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||| ||| ||||||||||||||| ||||||| |||||||||||||||||| || |||||||||| |
|
|
| T |
15944681 |
tcaccttttccttgaagggtgaccagccttaactcccatgctattgtgcgggctatgtcgaccttgatgcccttgagaatgtagtagattagtgggcata |
15944780 |
T |
|
| Q |
203 |
catccacagtgcaatcggacaagtggctgttaggtctgacattgtgaaggataaacttcaggatgaatttgcaagttttgttcatgagtttatattgtgc |
302 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15944781 |
catccacagtgcaatcagacaagtggctgttaggtttgacattgtgaaggataaacttcaggatgaatttgcaagttttgttcatgagtttatattgtgc |
15944880 |
T |
|
| Q |
303 |
tc |
304 |
Q |
| |
|
|| |
|
|
| T |
15944881 |
tc |
15944882 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 63 - 272
Target Start/End: Original strand, 22855006 - 22855215
Alignment:
| Q |
63 |
gcccatgatgagtccaggaaaagctaggcgggtttttggctcactttttccttgaagggtgaccagccttaactcccatactaatgtgcgggctatgtca |
162 |
Q |
| |
|
|||||| |||||||| || ||||| |||||||||||||| |||| |||||||||||| ||||| ||| | || ||||| | | ||| |||||||||| |
|
|
| T |
22855006 |
gcccataatgagtccggggaaagcgaggcgggtttttggttcaccttttccttgaagtgtgacaagcttcaattcccaagcaatagtgtgggctatgtcg |
22855105 |
T |
|
| Q |
163 |
accttgaagcccttgagaatgtagtatatgagtgggcatacatccacagtgcaatcggacaagtggctgttaggtctgacattgtgaaggataaacttca |
262 |
Q |
| |
|
|| |||| |||||||||||||||||| || ||||||||||||||||| | |||||||||||||||||||| ||| |||||||||||||||||||||||| |
|
|
| T |
22855106 |
actttgatgcccttgagaatgtagtagattagtgggcatacatccacgatacaatcggacaagtggctgttgggtttgacattgtgaaggataaacttca |
22855205 |
T |
|
| Q |
263 |
ggatgaattt |
272 |
Q |
| |
|
|||||||||| |
|
|
| T |
22855206 |
ggatgaattt |
22855215 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 296; Significance: 1e-166; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 296; E-Value: 1e-166
Query Start/End: Original strand, 4 - 311
Target Start/End: Complemental strand, 9573682 - 9573375
Alignment:
| Q |
4 |
gggttccggagttcctcatgtacagcggtgggcaacttcattcgtgaatctttaatcaagcccatgatgagtccaggaaaagctaggcgggtttttggct |
103 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9573682 |
gggttccggagttcctcatgtacagcggtgggaaacttcattcgtgaatctttaatcaagcccatgatgagtccaggaaaagctaggcgggtttttggct |
9573583 |
T |
|
| Q |
104 |
cactttttccttgaagggtgaccagccttaactcccatactaatgtgcgggctatgtcaaccttgaagcccttgagaatgtagtatatgagtgggcatac |
203 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9573582 |
cactttttccttgaagggtgaccagccttaactcccatgctaatgtgcgggctatgtcaaccttgaagcccttgagaatgtagtatatgagtgggcatac |
9573483 |
T |
|
| Q |
204 |
atccacagtgcaatcggacaagtggctgttaggtctgacattgtgaaggataaacttcaggatgaatttgcaagttttgttcatgagtttatattgtgct |
303 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9573482 |
atccacagtgcaatcggacaagtggctgttaggtctgacattgtgaaggataaactttaggatgaatttgcaagttttgttcatgagtttatattgtgct |
9573383 |
T |
|
| Q |
304 |
ctgtgatg |
311 |
Q |
| |
|
|||||||| |
|
|
| T |
9573382 |
ctgtgatg |
9573375 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 252; Significance: 1e-140; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 1 - 308
Target Start/End: Original strand, 45019299 - 45019606
Alignment:
| Q |
1 |
acggggttccggagttcctcatgtacagcggtgggcaacttcattcgtgaatctttaatcaagcccatgatgagtccaggaaaagctaggcgggtttttg |
100 |
Q |
| |
|
||||||||||||| ||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
45019299 |
acggggttccggatttcctcatgcacagcggtgggcatcttcattcgtgaatctttaattaagcccatgatgagtccaggaaaagctaggcgggtttgtg |
45019398 |
T |
|
| Q |
101 |
gctcactttttccttgaagggtgaccagccttaactcccatactaatgtgcgggctatgtcaaccttgaagcccttgagaatgtagtatatgagtgggca |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||| ||| ||||||||||||||||||||||| ||||||||||||||| || || |||||||| |
|
|
| T |
45019399 |
gctcactttttccttgaagggtgaccagccttaattcccatgctattgtgcgggctatgtcaaccttgatgcccttgagaatgtaatagattagtgggca |
45019498 |
T |
|
| Q |
201 |
tacatccacagtgcaatcggacaagtggctgttaggtctgacattgtgaaggataaacttcaggatgaatttgcaagttttgttcatgagtttatattgt |
300 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
45019499 |
tacatccacggtgcaatcggacaagtggctgttaggtctgacattgtgaaggataaatttcaggatgaatttgcaagttttgttcatgagtttatattgt |
45019598 |
T |
|
| Q |
301 |
gctctgtg |
308 |
Q |
| |
|
|||||||| |
|
|
| T |
45019599 |
gctctgtg |
45019606 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0045 (Bit Score: 130; Significance: 2e-67; HSPs: 1)
Name: scaffold0045
Description:
Target: scaffold0045; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 3 - 296
Target Start/End: Complemental strand, 5827 - 5534
Alignment:
| Q |
3 |
ggggttccggagttcctcatgtacagcggtgggcaacttcattcgtgaatctttaatcaagcccatgatgagtccaggaaaagctaggcgggtttttggc |
102 |
Q |
| |
|
||||||||||| ||||||||||||||| ||||||| ||||||||||| ||| || ||||||||||| |||||||| || ||||| |||| ||||||||| |
|
|
| T |
5827 |
ggggttccggatttcctcatgtacagcagtgggcatcttcattcgtgtatccttgatcaagcccataatgagtccggggaaagcgaggcaggtttttggt |
5728 |
T |
|
| Q |
103 |
tcactttttccttgaagggtgaccagccttaactcccatactaatgtgcgggctatgtcaaccttgaagcccttgagaatgtagtatatgagtgggcata |
202 |
Q |
| |
|
|| | |||||||||||| |||||| | | || ||||| | | ||| |||||||||| || |||| |||||||||||||||||| || | |||||||| |
|
|
| T |
5727 |
tcgccttttccttgaagtctgaccaacttcaattcccaagcaatagtgtgggctatgtcgactttgatgcccttgagaatgtagtagattaatgggcata |
5628 |
T |
|
| Q |
203 |
catccacagtgcaatcggacaagtggctgttaggtctgacattgtgaaggataaacttcaggatgaatttgcaagttttgttcatgagtttata |
296 |
Q |
| |
|
||||||| || |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| | || |||||||| | |||||| |
|
|
| T |
5627 |
catccacggtacaatcggacaagtggctgttgggtttgacattgtgaaggataaacttcaggatgaatttggaggtgttgttcataaatttata |
5534 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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