View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5159-Insertion-2 (Length: 940)

Name: NF5159-Insertion-2
Description: NF5159
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5159-Insertion-2
NF5159-Insertion-2
[»] chr4 (30 HSPs)
chr4 (7-934)||(35723074-35723985)
chr4 (547-670)||(28084517-28084640)
chr4 (547-660)||(35952574-35952680)
chr4 (553-622)||(903924-903992)
chr4 (551-604)||(3712516-3712568)
chr4 (547-620)||(22234881-22234954)
chr4 (547-604)||(40613446-40613502)
chr4 (549-611)||(8423718-8423779)
chr4 (551-609)||(18513243-18513300)
chr4 (625-671)||(29205539-29205585)
chr4 (547-620)||(40742587-40742659)
chr4 (559-608)||(44081580-44081628)
chr4 (623-671)||(19482748-19482796)
chr4 (550-602)||(22440609-22440660)
chr4 (547-603)||(36635320-36635375)
chr4 (623-666)||(21873309-21873352)
chr4 (623-666)||(21929170-21929213)
chr4 (553-620)||(30982869-30982935)
chr4 (555-610)||(33950140-33950194)
chr4 (550-604)||(999355-999408)
chr4 (552-610)||(7214523-7214580)
chr4 (625-671)||(16184902-16184948)
chr4 (549-611)||(38847012-38847073)
chr4 (547-671)||(46160892-46161012)
chr4 (551-597)||(56257933-56257978)
chr4 (551-605)||(56488516-56488569)
chr4 (548-617)||(3947760-3947828)
chr4 (565-610)||(8402743-8402787)
chr4 (557-610)||(9299056-9299107)
chr4 (559-604)||(19230316-19230360)
[»] chr1 (42 HSPs)
chr1 (557-671)||(34712325-34712436)
chr1 (547-620)||(25361882-25361954)
chr1 (547-612)||(6427346-6427410)
chr1 (549-610)||(38503318-38503378)
chr1 (547-610)||(36878457-36878519)
chr1 (558-612)||(7918210-7918263)
chr1 (547-671)||(9828040-9828172)
chr1 (549-622)||(17754309-17754381)
chr1 (555-620)||(44482234-44482298)
chr1 (549-609)||(26238115-26238173)
chr1 (552-611)||(9709821-9709879)
chr1 (548-603)||(25098563-25098617)
chr1 (550-612)||(9629899-9629960)
chr1 (550-612)||(20157349-20157410)
chr1 (547-604)||(398772-398828)
chr1 (551-671)||(1486646-1486768)
chr1 (547-612)||(5376499-5376563)
chr1 (547-671)||(10572536-10572652)
chr1 (547-604)||(17831538-17831594)
chr1 (549-622)||(27471555-27471627)
chr1 (551-612)||(34371714-34371773)
chr1 (551-612)||(48148036-48148097)
chr1 (549-609)||(1864882-1864941)
chr1 (552-671)||(10233254-10233373)
chr1 (551-603)||(17425101-17425152)
chr1 (547-611)||(29163381-29163444)
chr1 (547-611)||(39953146-39953209)
chr1 (551-611)||(40181871-40181930)
chr1 (547-611)||(52903245-52903308)
chr1 (547-610)||(2896122-2896184)
chr1 (547-610)||(5898267-5898329)
chr1 (552-611)||(5927340-5927398)
chr1 (547-602)||(12443469-12443523)
chr1 (559-622)||(16164304-16164366)
chr1 (547-601)||(8842724-8842777)
chr1 (554-620)||(21038086-21038151)
chr1 (551-609)||(30847722-30847779)
chr1 (623-669)||(48040418-48040464)
chr1 (547-596)||(1262880-1262928)
chr1 (549-598)||(34298434-34298482)
chr1 (550-611)||(38078661-38078721)
chr1 (622-671)||(46940750-46940799)
[»] chr7 (36 HSPs)
chr7 (547-622)||(32308116-32308190)
chr7 (548-617)||(5548673-5548741)
chr7 (547-610)||(19206046-19206108)
chr7 (551-610)||(42720891-42720949)
chr7 (549-611)||(20549789-20549850)
chr7 (551-604)||(3520349-3520401)
chr7 (547-607)||(22868038-22868097)
chr7 (547-610)||(5835243-5835305)
chr7 (547-610)||(23191892-23191954)
chr7 (550-616)||(2034440-2034505)
chr7 (547-597)||(29787383-29787432)
chr7 (547-671)||(1433450-1433576)
chr7 (547-612)||(22602709-22602773)
chr7 (547-620)||(24339638-24339710)
chr7 (547-620)||(26329373-26329445)
chr7 (707-824)||(48157125-48157241)
chr7 (623-671)||(9778574-9778622)
chr7 (623-671)||(15680878-15680926)
chr7 (623-671)||(21864877-21864925)
chr7 (549-612)||(49107819-49107880)
chr7 (557-612)||(7328690-7328744)
chr7 (554-609)||(17851434-17851488)
chr7 (557-619)||(3142070-3142131)
chr7 (629-671)||(7438792-7438834)
chr7 (549-611)||(9482932-9482993)
chr7 (547-620)||(11272577-11272651)
chr7 (551-613)||(19992001-19992062)
chr7 (547-609)||(21828407-21828468)
chr7 (547-604)||(6630919-6630975)
chr7 (557-610)||(24146822-24146874)
chr7 (547-612)||(25791649-25791712)
chr7 (550-611)||(26733303-26733363)
chr7 (547-612)||(27945037-27945101)
chr7 (550-611)||(32287463-32287523)
chr7 (547-612)||(35861960-35862024)
chr7 (551-604)||(38134413-38134465)
[»] chr2 (36 HSPs)
chr2 (580-671)||(34993924-34994013)
chr2 (547-671)||(15909572-15909695)
chr2 (547-603)||(21616758-21616813)
chr2 (551-622)||(44860320-44860390)
chr2 (547-620)||(16069245-16069317)
chr2 (552-671)||(18631353-18631465)
chr2 (554-611)||(34691805-34691861)
chr2 (554-611)||(34714217-34714273)
chr2 (549-609)||(31808075-31808134)
chr2 (548-604)||(37411251-37411306)
chr2 (552-611)||(18570973-18571031)
chr2 (549-604)||(23718024-23718078)
chr2 (549-604)||(24105696-24105750)
chr2 (548-610)||(18276518-18276579)
chr2 (550-612)||(24975324-24975385)
chr2 (547-601)||(28677905-28677958)
chr2 (547-616)||(2423865-2423933)
chr2 (623-668)||(12224292-12224337)
chr2 (550-610)||(18512143-18512202)
chr2 (555-603)||(22556964-22557012)
chr2 (623-671)||(26769591-26769639)
chr2 (549-592)||(27084260-27084302)
chr2 (577-620)||(35056893-35056936)
chr2 (549-610)||(42832277-42832337)
chr2 (547-609)||(18420436-18420497)
chr2 (547-597)||(21782832-21782881)
chr2 (621-671)||(37419821-37419871)
chr2 (547-609)||(39279671-39279732)
chr2 (559-609)||(44605141-44605190)
chr2 (547-604)||(896207-896263)
chr2 (558-611)||(5367199-5367251)
chr2 (559-612)||(15098104-15098156)
chr2 (559-620)||(19613604-19613664)
chr2 (549-610)||(21091721-21091781)
chr2 (557-598)||(29664015-29664056)
chr2 (559-604)||(30527602-30527646)
[»] chr8 (23 HSPs)
chr8 (547-620)||(24362193-24362265)
chr8 (550-610)||(12606830-12606889)
chr8 (547-668)||(22204635-22204757)
chr8 (547-604)||(31236584-31236640)
chr8 (547-668)||(31109463-31109581)
chr8 (550-604)||(34897084-34897137)
chr8 (547-671)||(22651972-22652104)
chr8 (549-601)||(4611532-4611583)
chr8 (547-611)||(13844596-13844659)
chr8 (547-602)||(39954288-39954342)
chr8 (557-611)||(3025557-3025610)
chr8 (547-611)||(126347-126412)
chr8 (547-612)||(11927085-11927149)
chr8 (547-604)||(27213543-27213599)
chr8 (547-611)||(4786338-4786401)
chr8 (552-604)||(20785472-20785523)
chr8 (547-609)||(7658459-7658520)
chr8 (625-671)||(13397622-13397668)
chr8 (621-671)||(44067594-44067644)
chr8 (559-604)||(8798838-8798882)
chr8 (547-612)||(11944661-11944725)
chr8 (548-597)||(24017452-24017500)
chr8 (550-603)||(36934669-36934721)
[»] chr3 (39 HSPs)
chr3 (547-620)||(8039826-8039898)
chr3 (547-611)||(8383253-8383316)
chr3 (549-611)||(7928448-7928509)
chr3 (554-611)||(49505154-49505210)
chr3 (549-671)||(4466542-4466661)
chr3 (547-671)||(10455786-10455913)
chr3 (549-612)||(11313799-11313861)
chr3 (549-620)||(16192741-16192811)
chr3 (695-751)||(1217877-1217930)
chr3 (551-600)||(9624641-9624689)
chr3 (622-671)||(25074863-25074912)
chr3 (547-671)||(34910313-34910434)
chr3 (547-620)||(37077354-37077426)
chr3 (550-611)||(40993335-40993396)
chr3 (547-671)||(24204983-24205104)
chr3 (623-671)||(28918072-28918120)
chr3 (548-604)||(32804547-32804602)
chr3 (623-671)||(40052381-40052429)
chr3 (547-598)||(5407260-5407310)
chr3 (547-618)||(14832095-14832165)
chr3 (549-604)||(29508442-29508496)
chr3 (559-610)||(40150572-40150622)
chr3 (547-621)||(1550136-1550209)
chr3 (549-611)||(8789550-8789611)
chr3 (547-601)||(12704003-12704056)
chr3 (578-612)||(26917296-26917330)
chr3 (563-621)||(39002044-39002101)
chr3 (709-771)||(45432997-45433058)
chr3 (552-617)||(7948959-7949024)
chr3 (551-604)||(10690269-10690321)
chr3 (547-620)||(14209109-14209181)
chr3 (552-609)||(17005621-17005677)
chr3 (622-671)||(21211362-21211411)
chr3 (554-599)||(21419467-21419511)
chr3 (547-612)||(26290367-26290431)
chr3 (626-671)||(29508522-29508567)
chr3 (551-604)||(34307787-34307839)
chr3 (558-603)||(37991516-37991560)
chr3 (548-617)||(49651780-49651848)
[»] chr6 (44 HSPs)
chr6 (547-611)||(9629379-9629442)
chr6 (547-611)||(19040348-19040411)
chr6 (549-611)||(7377977-7378038)
chr6 (547-611)||(7265593-7265656)
chr6 (547-611)||(20371110-20371173)
chr6 (552-604)||(30866151-30866202)
chr6 (548-611)||(7996378-7996440)
chr6 (548-611)||(8022361-8022423)
chr6 (554-612)||(9617437-9617494)
chr6 (551-612)||(9025493-9025553)
chr6 (547-612)||(9027174-9027238)
chr6 (547-620)||(26562685-26562757)
chr6 (547-611)||(21924935-21924998)
chr6 (547-611)||(33001289-33001352)
chr6 (562-617)||(7112789-7112843)
chr6 (562-617)||(8781302-8781356)
chr6 (551-621)||(7723240-7723309)
chr6 (547-609)||(9658875-9658936)
chr6 (547-620)||(10339116-10339189)
chr6 (550-604)||(13851735-13851788)
chr6 (547-620)||(8931593-8931665)
chr6 (548-609)||(13364707-13364767)
chr6 (547-620)||(16766693-16766765)
chr6 (625-670)||(32978842-32978887)
chr6 (547-611)||(5732510-5732573)
chr6 (547-611)||(7027237-7027301)
chr6 (561-617)||(9024170-9024225)
chr6 (623-671)||(9027236-9027284)
chr6 (548-612)||(10294104-10294167)
chr6 (556-620)||(34073338-34073401)
chr6 (547-610)||(7938112-7938174)
chr6 (547-606)||(17341669-17341727)
chr6 (547-617)||(12696320-12696389)
chr6 (547-612)||(21395307-21395370)
chr6 (547-612)||(3398615-3398678)
chr6 (622-671)||(7625184-7625233)
chr6 (547-620)||(9107361-9107433)
chr6 (547-604)||(10842528-10842584)
chr6 (551-612)||(10888973-10889033)
chr6 (623-668)||(25096503-25096548)
chr6 (547-620)||(32313400-32313472)
chr6 (551-612)||(32320668-32320728)
chr6 (558-603)||(33419180-33419224)
chr6 (552-609)||(33468384-33468440)
[»] chr5 (31 HSPs)
chr5 (551-611)||(32630735-32630794)
chr5 (548-612)||(3966500-3966563)
chr5 (547-619)||(6035479-6035549)
chr5 (549-620)||(32766934-32767004)
chr5 (549-610)||(12927652-12927712)
chr5 (548-620)||(18592070-18592141)
chr5 (557-609)||(23012410-23012461)
chr5 (547-611)||(28588674-28588737)
chr5 (552-671)||(30502330-30502446)
chr5 (552-671)||(30542673-30542789)
chr5 (558-620)||(22423803-22423864)
chr5 (551-612)||(6471888-6471948)
chr5 (547-604)||(27144459-27144515)
chr5 (547-671)||(31084319-31084445)
chr5 (547-604)||(34879346-34879402)
chr5 (551-620)||(39698541-39698609)
chr5 (548-612)||(11685936-11685999)
chr5 (552-620)||(12264820-12264887)
chr5 (552-612)||(36838544-36838603)
chr5 (547-606)||(9449465-9449523)
chr5 (548-611)||(16203795-16203857)
chr5 (547-671)||(35017033-35017160)
chr5 (529-596)||(27932211-27932279)
chr5 (550-612)||(39205879-39205940)
chr5 (624-670)||(39268541-39268587)
chr5 (563-617)||(41558648-41558701)
chr5 (547-612)||(2436918-2436982)
chr5 (715-772)||(2933708-2933764)
chr5 (550-603)||(38749571-38749623)
chr5 (551-604)||(41091264-41091316)
chr5 (695-751)||(41957528-41957581)
[»] scaffold0123 (1 HSPs)
scaffold0123 (551-622)||(44514-44584)
[»] scaffold0024 (1 HSPs)
scaffold0024 (553-620)||(68233-68299)
[»] scaffold1528 (1 HSPs)
scaffold1528 (549-622)||(1033-1105)
[»] scaffold0376 (1 HSPs)
scaffold0376 (551-620)||(6312-6380)
[»] scaffold0223 (1 HSPs)
scaffold0223 (547-619)||(20168-20239)
[»] scaffold0008 (1 HSPs)
scaffold0008 (552-620)||(263363-263430)
[»] scaffold0020 (1 HSPs)
scaffold0020 (549-612)||(135311-135373)
[»] scaffold0011 (1 HSPs)
scaffold0011 (559-610)||(240022-240072)
[»] scaffold0110 (1 HSPs)
scaffold0110 (547-609)||(28846-28907)
[»] scaffold0022 (2 HSPs)
scaffold0022 (550-612)||(99892-99953)
scaffold0022 (559-604)||(90851-90895)
[»] scaffold0044 (1 HSPs)
scaffold0044 (547-620)||(53176-53248)
[»] scaffold0450 (1 HSPs)
scaffold0450 (623-671)||(8566-8614)
[»] scaffold0380 (1 HSPs)
scaffold0380 (623-671)||(8670-8718)
[»] scaffold0036 (1 HSPs)
scaffold0036 (548-612)||(9746-9809)
[»] scaffold0004 (1 HSPs)
scaffold0004 (547-607)||(92803-92862)
[»] scaffold0085 (1 HSPs)
scaffold0085 (550-604)||(26392-26445)
[»] scaffold0049 (1 HSPs)
scaffold0049 (561-619)||(56932-56989)


Alignment Details
Target: chr4 (Bit Score: 737; Significance: 0; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 737; E-Value: 0
Query Start/End: Original strand, 7 - 934
Target Start/End: Complemental strand, 35723985 - 35723074
Alignment:
Q  7 atgaatctgatcaagatgattgtggctacttgttaaggtaggatttgaggtcctcacatgcataaagtacaaaactgagtgataccaattattcaaatca 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  35723985 atgaatctgatcaagatgattgtggctacttgttaaggtaggatttgaggtcctcacatgcataaagtacaaagctgagtgataccaattattcaaatca 35723886  T
Q  107 aagtttttaatttattactctgtggggaaactttgtgactaaaaagaggtctactattgtattggtccatggctcttcactcctcaataatacaggaaac 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35723885 aagtttttaatttattactctgtggggaaactttgtgactaaaaagaggtctactattgtattggtccatggctcttcactcctcaataatacaggaaac 35723786  T
Q  207 gacaagcactaaactatccttgaatatacggtggtccaatataccgtacactatttagtagtattcactaatattctatttcatttggaatcaagatgaa 306  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35723785 gacaagcactaaactatccttgaatatacggtggtccaatataccgtacactatttagtagtattcactaatattctatttcatttggaatcaagatgaa 35723686  T
Q  307 aacccaattcaactaattttgtatttagataaacaacttaataaggcacttatactctcaatagtatcgacatttccgatcgaagacgtgtttggtattc 406  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| |||||||||||||||| |||| ||||||||| |||    
T  35723685 aacccaattcaactaattttgtatctagataaacaacttaataaggcacttatagtctcaatagcatcgacatttccgatcaaagaggtgtttggtgttc 35723586  T
Q  407 gtgtcagattcggtgtaccgatgataagagaacaaaatcatcatttctttgtatgtcgatgtcaatgttgtgttgggtgttcgtgttagcatccgtcttt 506  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| ||||||||||    
T  35723585 gtgtcagattcggtgtaccgatgataagagaacaaaatcatcatttctttgtatgtcgatgtcaatgttgtgttgggtgtccgcgttagtatccgtcttt 35723486  T
Q  507 catggagcaccgatacgggcacgacatgacactgatacgccgccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcag 606  Q
    |||| ||||||||||||| |||||||||||||||| |   |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  35723485 catgaagcaccgatacggacacgacatgacactgaca---cgccgacaccgctaataatttgagaaaatacacataattcaatgtaattatatgtgtcag 35723389  T
Q  607 tgtcgtatcggtgttgcgtgtccgacactgggacacgtctaattcaaggagtgttcgtgcttcatcatagcttataacctacatgttgatcatataagtg 706  Q
    |||||||||||||| |||||||||||||||||||||      || |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35723388 tgtcgtatcggtgtcgcgtgtccgacactgggacac------tttaaggagtgttcgtgcttcatcatagcttataacctacatgttgatcatataagtg 35723295  T
Q  707 cttatttgtataataaaagaaaaattgaagttaaattgttttcatatttagctataagttgtttttaaaagctattcggggaaacttataaaaatcagct 806  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||         |||| ||||||||| | ||||||||||||||||||||    
T  35723294 cttatttgtataataaaagaaaaattgaagttaaattgttttcatatttagcta---------tttataagctattc-gagaaacttataaaaatcagct 35723205  T
Q  807 gaagacagtttgtggacaagtcacaagttggttcactcaagt---aaaatatcaggaagtgtttattccatcaggtaaactcaaataaatccgaacggac 903  Q
    |||||||||||||||||||||||||||||| |||||||||||   ||||||||| |||||||||||||||||| |||||||||||||||||| ||| |||    
T  35723204 gaagacagtttgtggacaagtcacaagttgtttcactcaagtaaaaaaatatca-gaagtgtttattccatcaagtaaactcaaataaatccaaacagac 35723106  T
Q  904 ct-aaaaaaccatatagaaataatccagaggc 934  Q
    || |||||||||||||||||||||||||||||    
T  35723105 ctaaaaaaaccatatagaaataatccagaggc 35723074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 547 - 670
Target Start/End: Original strand, 28084517 - 28084640
Alignment:
Q  547 cgccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcgtatcggtgttgcgtgtccgacactgggacacgtct 646  Q
    ||||||||| ||||| ||||||| ||||  || ||||||||||||||||| | ||||| ||||||| ||||||   ||||||||||||||||||||| ||    
T  28084517 cgccgacacagctaagaatttgaaaaaaatcacataattcaatgtaattacaagtgtctgtgtcgtgtcggtgacacgtgtccgacactgggacacgcct 28084616  T
Q  647 aattcaaggagtgttcgtgcttca 670  Q
    ||| | |||||||| |||||||||    
T  28084617 aatccgaggagtgtccgtgcttca 28084640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 547 - 660
Target Start/End: Complemental strand, 35952680 - 35952574
Alignment:
Q  547 cgccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcgtatcggtgttgcgtgtccgacactgggacacgtct 646  Q
    ||||| ||| ||||||||||||| ||||| ||||||||||||||||||||||||| ||||||||      |||| |||||||||||||   |||||||||    
T  35952680 cgccgccactgctaataatttgataaaat-catataattcaatgtaattatatgtatcagtgtc------gtgtcgcgtgtccgacaccaagacacgtct 35952588  T
Q  647 aattcaaggagtgt 660  Q
    ||| ||| ||||||    
T  35952587 aatccaatgagtgt 35952574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 553 - 622
Target Start/End: Original strand, 903924 - 903992
Alignment:
Q  553 caccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcgtatcggtgttg 622  Q
    ||||| ||||||||||||||||| || |||||||| ||||||||||||| ||||| ||||||||||||||    
T  903924 caccgttaataatttgagaaaat-cacataattcagtgtaattatatgtatcagtatcgtatcggtgttg 903992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 551 - 604
Target Start/End: Complemental strand, 3712568 - 3712516
Alignment:
Q  551 gacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtc 604  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  3712568 gacaccgctaataatttgagaaaat-catgtaattcaatgtaattatatgtgtc 3712516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 547 - 620
Target Start/End: Complemental strand, 22234954 - 22234881
Alignment:
Q  547 cgccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcgtatcggtgt 620  Q
    ||||||||||||||| ||||||| ||||  || |||||||| ||||||| |||||||| ||||||| |||||||    
T  22234954 cgccgacaccgctaaaaatttgaaaaaaatcacataattcagtgtaattctatgtgtcggtgtcgtgtcggtgt 22234881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 547 - 604
Target Start/End: Original strand, 40613446 - 40613502
Alignment:
Q  547 cgccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtc 604  Q
    ||||||||||||||||| ||||||||||| || |||||||| ||||||||||||||||    
T  40613446 cgccgacaccgctaatattttgagaaaat-cacataattcagtgtaattatatgtgtc 40613502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 549 - 611
Target Start/End: Complemental strand, 8423779 - 8423718
Alignment:
Q  549 ccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcg 611  Q
    ||||||||||||||||||||||||||| || |||||||| ||||||||||  |||| ||||||    
T  8423779 ccgacaccgctaataatttgagaaaat-cacataattcagtgtaattataaatgtcggtgtcg 8423718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 551 - 609
Target Start/End: Complemental strand, 18513300 - 18513243
Alignment:
Q  551 gacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgt 609  Q
    ||||||| |||||||||||||||||  | ||||||||||||||| ||||||||||||||    
T  18513300 gacaccgataataatttgagaaaatg-acataattcaatgtaatcatatgtgtcagtgt 18513243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 625 - 671
Target Start/End: Original strand, 29205539 - 29205585
Alignment:
Q  625 tgtccgacactgggacacgtctaattcaaggagtgttcgtgcttcat 671  Q
    ||||||||||||||||||| ||||| | |||||||||||||||||||    
T  29205539 tgtccgacactgggacacgcctaatccgaggagtgttcgtgcttcat 29205585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 547 - 620
Target Start/End: Original strand, 40742587 - 40742659
Alignment:
Q  547 cgccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcgtatcggtgt 620  Q
    ||||||||||  ||||||||||||||||| ||||||||  | ||||||||||||||||  |||||| |||||||    
T  40742587 cgccgacaccattaataatttgagaaaat-catataatctagtgtaattatatgtgtcgatgtcgtgtcggtgt 40742659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 559 - 608
Target Start/End: Complemental strand, 44081628 - 44081580
Alignment:
Q  559 taataatttgagaaaatacatataattcaatgtaattatatgtgtcagtg 608  Q
    ||||||||||| ||||| ||||||||| ||||||||||||||||||||||    
T  44081628 taataatttgaaaaaat-catataatttaatgtaattatatgtgtcagtg 44081580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 623 - 671
Target Start/End: Original strand, 19482748 - 19482796
Alignment:
Q  623 cgtgtccgacactgggacacgtctaattcaaggagtgttcgtgcttcat 671  Q
    ||||||||||||||||||||  ||||| | |||||||||||||||||||    
T  19482748 cgtgtccgacactgggacacacctaatccgaggagtgttcgtgcttcat 19482796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 550 - 602
Target Start/End: Complemental strand, 22440660 - 22440609
Alignment:
Q  550 cgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtg 602  Q
    |||||||| ||||||||||||||||| || |||||||| ||||||||||||||    
T  22440660 cgacaccgttaataatttgagaaaat-cacataattcagtgtaattatatgtg 22440609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 547 - 603
Target Start/End: Original strand, 36635320 - 36635375
Alignment:
Q  547 cgccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgt 603  Q
    |||| ||||| |||||||||||||||||| || |||||||| |||||||||||||||    
T  36635320 cgccaacaccactaataatttgagaaaat-cacataattcagtgtaattatatgtgt 36635375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 623 - 666
Target Start/End: Complemental strand, 21873352 - 21873309
Alignment:
Q  623 cgtgtccgacactgggacacgtctaattcaaggagtgttcgtgc 666  Q
    |||||||||||| |||||||||||||| ||||||||||| ||||    
T  21873352 cgtgtccgacaccgggacacgtctaatccaaggagtgtttgtgc 21873309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 623 - 666
Target Start/End: Complemental strand, 21929213 - 21929170
Alignment:
Q  623 cgtgtccgacactgggacacgtctaattcaaggagtgttcgtgc 666  Q
    |||||||||||| |||||||||||||| ||||||||||| ||||    
T  21929213 cgtgtccgacaccgggacacgtctaatccaaggagtgtttgtgc 21929170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 553 - 620
Target Start/End: Complemental strand, 30982935 - 30982869
Alignment:
Q  553 caccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcgtatcggtgt 620  Q
    |||||||||| |||||||||||| || ||| |||| |||||||||| ||||| ||||||| |||||||    
T  30982935 caccgctaatgatttgagaaaat-cacatatttcagtgtaattataagtgtcggtgtcgtgtcggtgt 30982869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 555 - 610
Target Start/End: Original strand, 33950140 - 33950194
Alignment:
Q  555 ccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtc 610  Q
    ||||||||||||||||||||| || |||||| |||||||| ||||||||| |||||    
T  33950140 ccgctaataatttgagaaaat-cacataatttaatgtaatcatatgtgtcggtgtc 33950194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 550 - 604
Target Start/End: Complemental strand, 999408 - 999355
Alignment:
Q  550 cgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtc 604  Q
    ||||| ||||||||||||||| |||| ||||||||| | ||||||||||||||||    
T  999408 cgacatcgctaataatttgagtaaat-catataatttagtgtaattatatgtgtc 999355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 552 - 610
Target Start/End: Complemental strand, 7214580 - 7214523
Alignment:
Q  552 acaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtc 610  Q
    ||||| |||||||||||||||||| || |||||| |||||||||||||| ||| |||||    
T  7214580 acaccactaataatttgagaaaat-cacataatttaatgtaattatatgcgtcggtgtc 7214523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 625 - 671
Target Start/End: Original strand, 16184902 - 16184948
Alignment:
Q  625 tgtccgacactgggacacgtctaattcaaggagtgttcgtgcttcat 671  Q
    ||||||||||||||||||| ||||| | ||||||||| |||||||||    
T  16184902 tgtccgacactgggacacgcctaatccgaggagtgtttgtgcttcat 16184948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 549 - 611
Target Start/End: Complemental strand, 38847073 - 38847012
Alignment:
Q  549 ccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcg 611  Q
    ||||||| ||||||||||||| ||||| ||||| ||||| |||||||| | ||||||||||||    
T  38847073 ccgacacagctaataatttgaaaaaat-catattattcagtgtaattacaagtgtcagtgtcg 38847012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 547 - 671
Target Start/End: Original strand, 46160892 - 46161012
Alignment:
Q  547 cgccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcgtatcggtgttgcgtgtccgacactgggacacgtct 646  Q
    ||||||| ||| ||| ||| |||||||||| | |||||||| ||| |||||||||||| ||||||| ||||   |||||||||  || ||||| || |||    
T  46160892 cgccgacgccgttaaaaatatgagaaaata-acataattcagtgttattatatgtgtcggtgtcgtgtcgg---tgcgtgtccagcaatgggatacatct 46160987  T
Q  647 aattcaaggagtgttcgtgcttcat 671  Q
    ||| | |||||||| |||| |||||    
T  46160988 aatcctaggagtgtccgtgtttcat 46161012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 551 - 597
Target Start/End: Original strand, 56257933 - 56257978
Alignment:
Q  551 gacaccgctaataatttgagaaaatacatataattcaatgtaattat 597  Q
    ||||| ||||||||||||||||||| ||||||||||| |||||||||    
T  56257933 gacactgctaataatttgagaaaat-catataattcagtgtaattat 56257978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 551 - 605
Target Start/End: Complemental strand, 56488569 - 56488516
Alignment:
Q  551 gacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtca 605  Q
    ||||||||||| ||||||||||||| |||||||||||  ||||| ||||||||||    
T  56488569 gacaccgctaacaatttgagaaaat-catataattcagggtaatcatatgtgtca 56488516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 548 - 617
Target Start/End: Complemental strand, 3947828 - 3947760
Alignment:
Q  548 gccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcgtatcgg 617  Q
    |||||||| ||||||||||||| ||||| |  |||||||| |||||||| | ||||||||||||| ||||    
T  3947828 gccgacacagctaataatttgaaaaaat-cgcataattcagtgtaattacaagtgtcagtgtcgtgtcgg 3947760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 565 - 610
Target Start/End: Complemental strand, 8402787 - 8402743
Alignment:
Q  565 tttgagaaaatacatataattcaatgtaattatatgtgtcagtgtc 610  Q
    ||||||||||| ||||||||||| ||||||||||||| ||||||||    
T  8402787 tttgagaaaat-catataattcagtgtaattatatgtctcagtgtc 8402743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 557 - 610
Target Start/End: Complemental strand, 9299107 - 9299056
Alignment:
Q  557 gctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtc 610  Q
    |||||||||||||||||||| ||||| || | ||||||||||||||||||||||    
T  9299107 gctaataatttgagaaaata-atata-ttaagtgtaattatatgtgtcagtgtc 9299056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 559 - 604
Target Start/End: Complemental strand, 19230360 - 19230316
Alignment:
Q  559 taataatttgagaaaatacatataattcaatgtaattatatgtgtc 604  Q
    |||||||||||||||||| | ||||||||||||||||||| |||||    
T  19230360 taataatttgagaaaata-acataattcaatgtaattataggtgtc 19230316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 60; Significance: 4e-25; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 557 - 671
Target Start/End: Complemental strand, 34712436 - 34712325
Alignment:
Q  557 gctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcgtatcggtgttgcgtgtccgacactgggacacgtctaattcaagga 656  Q
    |||||||||||||||||||| | |||||| | |||||||||||||||||||||||| ||||     ||||||| ||||||||||||||||||||||||||    
T  34712436 gctaataatttgagaaaata-acataatttagtgtaattatatgtgtcagtgtcgtgtcggaca--cgtgtcctacactgggacacgtctaattcaagga 34712340  T
Q  657 gtgttcgtgcttcat 671  Q
    |||| ||||||||||    
T  34712339 gtgtccgtgcttcat 34712325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 547 - 620
Target Start/End: Original strand, 25361882 - 25361954
Alignment:
Q  547 cgccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcgtatcggtgt 620  Q
    |||||||||| || ||||||||||||||| || |||||||| |||||||||||||||||||||||| |||||||    
T  25361882 cgccgacaccactgataatttgagaaaat-cacataattcagtgtaattatatgtgtcagtgtcgtgtcggtgt 25361954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 547 - 612
Target Start/End: Original strand, 6427346 - 6427410
Alignment:
Q  547 cgccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcgt 612  Q
    |||| |||||||||||||||||||||||| || ||||||||||||||||||||||||  |||||||    
T  6427346 cgccaacaccgctaataatttgagaaaat-cacataattcaatgtaattatatgtgttggtgtcgt 6427410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 549 - 610
Target Start/End: Original strand, 38503318 - 38503378
Alignment:
Q  549 ccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtc 610  Q
    ||||||||||||||||||||||||||| |||||| |||| |||||||||||||||| |||||    
T  38503318 ccgacaccgctaataatttgagaaaat-catatatttcagtgtaattatatgtgtcggtgtc 38503378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 547 - 610
Target Start/End: Original strand, 36878457 - 36878519
Alignment:
Q  547 cgccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtc 610  Q
    ||||||||||||||||||||||||||||| || |||||||| |||||||||| ||||| |||||    
T  36878457 cgccgacaccgctaataatttgagaaaat-cacataattcagtgtaattataggtgtcggtgtc 36878519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 558 - 612
Target Start/End: Complemental strand, 7918263 - 7918210
Alignment:
Q  558 ctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcgt 612  Q
    |||||||||||||||||| || |||||||| ||||||||||||||||||||||||    
T  7918263 ctaataatttgagaaaat-cacataattcagtgtaattatatgtgtcagtgtcgt 7918210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 547 - 671
Target Start/End: Original strand, 9828040 - 9828172
Alignment:
Q  547 cgccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcgtatcggtgt---------tgcgtgtccgacactgg 637  Q
    |||||||||| |||||||||||| ||||| || |||||||| ||||||| |||||||| ||||||| || ||||           |||||||||||| ||    
T  9828040 cgccgacaccactaataatttgataaaat-cacataattcagtgtaattttatgtgtcggtgtcgtgtccgtgtcagacacgacacgtgtccgacaccgg 9828138  T
Q  638 gacacgtctaattcaaggagtgttcgtgcttcat 671  Q
    |||||||||||| | |||||||| ||||||||||    
T  9828139 gacacgtctaatccgaggagtgtccgtgcttcat 9828172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 549 - 622
Target Start/End: Original strand, 17754309 - 17754381
Alignment:
Q  549 ccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcgtatcggtgttg 622  Q
    ||||||||||||||||||||| |||||  | |||||||| ||||| ||||||||||||||| || |||||||||    
T  17754309 ccgacaccgctaataatttgaaaaaatt-acataattcagtgtaactatatgtgtcagtgtggtgtcggtgttg 17754381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 555 - 620
Target Start/End: Original strand, 44482234 - 44482298
Alignment:
Q  555 ccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcgtatcggtgt 620  Q
    ||||| ||||||||||||||| || |||||||| |||||||||||||||| ||||||| |||||||    
T  44482234 ccgcttataatttgagaaaat-cacataattcagtgtaattatatgtgtcggtgtcgtgtcggtgt 44482298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 549 - 609
Target Start/End: Complemental strand, 26238173 - 26238115
Alignment:
Q  549 ccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgt 609  Q
    |||||||||||||||||||||||||||| | |||||||| ||||| |||||||||||||||    
T  26238173 ccgacaccgctaataatttgagaaaata-acataattcagtgtaa-tatatgtgtcagtgt 26238115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 552 - 611
Target Start/End: Original strand, 9709821 - 9709879
Alignment:
Q  552 acaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcg 611  Q
    |||||||||||||||||||||||| || |||||||  |||||||||||||||| ||||||    
T  9709821 acaccgctaataatttgagaaaat-cacataattcgttgtaattatatgtgtcggtgtcg 9709879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 548 - 603
Target Start/End: Complemental strand, 25098617 - 25098563
Alignment:
Q  548 gccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgt 603  Q
    |||||||||||| ||||||||||||||| || |||||||| |||||||||||||||    
T  25098617 gccgacaccgctgataatttgagaaaat-cacataattcagtgtaattatatgtgt 25098563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 550 - 612
Target Start/End: Complemental strand, 9629960 - 9629899
Alignment:
Q  550 cgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcgt 612  Q
    |||||||||||||||||||| ||||| ||||||||||| ||| |||||| ||||| |||||||    
T  9629960 cgacaccgctaataatttgataaaat-catataattcagtgtgattataagtgtcggtgtcgt 9629899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 550 - 612
Target Start/End: Complemental strand, 20157410 - 20157349
Alignment:
Q  550 cgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcgt 612  Q
    |||||||||||||||| ||||||||| || |||||||| |||||| ||||||||| |||||||    
T  20157410 cgacaccgctaataatgtgagaaaat-cacataattcagtgtaatcatatgtgtcggtgtcgt 20157349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 547 - 604
Target Start/End: Complemental strand, 398828 - 398772
Alignment:
Q  547 cgccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtc 604  Q
    ||||||||||||||||||||||| ||||| || |||||||| |||||||||| |||||    
T  398828 cgccgacaccgctaataatttgaaaaaat-cacataattcagtgtaattataggtgtc 398772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 551 - 671
Target Start/End: Complemental strand, 1486768 - 1486646
Alignment:
Q  551 gacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcgtatcgg---tgttgcgtgtccgacactgggacacgtcta 647  Q
    ||||| ||||||||||||| ||||| || |||||||| |||||||||| ||||| ||||||| ||||    |   |||||||||||| |||||||| |||    
T  1486768 gacacagctaataatttgaaaaaat-cacataattcagtgtaattataagtgtcggtgtcgtgtcggacacgacacgtgtccgacaccgggacacgccta 1486670  T
Q  648 attcaaggagtgttcgtgcttcat 671  Q
    || | ||||||||  |||||||||    
T  1486669 atccgaggagtgtctgtgcttcat 1486646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 547 - 612
Target Start/End: Complemental strand, 5376563 - 5376499
Alignment:
Q  547 cgccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcgt 612  Q
    ||||||||||||||||||||| |||||||| | |||||||| |||||||| | ||||| |||||||    
T  5376563 cgccgacaccgctaataatttaagaaaata-acataattcagtgtaattaaaagtgtcggtgtcgt 5376499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 547 - 671
Target Start/End: Complemental strand, 10572652 - 10572536
Alignment:
Q  547 cgccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcgtatcggtgttgcgtgtccgacactgggacacgtct 646  Q
    |||||||||| |||||||||||||||||| || |||||||  |||||||| ||||||| ||||       |||||| ||||| | |||  ||||||| ||    
T  10572652 cgccgacaccactaataatttgagaaaat-cacataattcggtgtaattaaatgtgtcggtgt------tgtgttg-gtgtcaggcacgtggacacgcct 10572561  T
Q  647 aattcaaggagtgttcgtgcttcat 671  Q
    |||||||||||||| ||||||||||    
T  10572560 aattcaaggagtgtccgtgcttcat 10572536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 547 - 604
Target Start/End: Complemental strand, 17831594 - 17831538
Alignment:
Q  547 cgccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtc 604  Q
    ||||||||||||||||||||||||||||| || || ||||| |||||| |||||||||    
T  17831594 cgccgacaccgctaataatttgagaaaat-cacattattcagtgtaatcatatgtgtc 17831538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 549 - 622
Target Start/End: Complemental strand, 27471627 - 27471555
Alignment:
Q  549 ccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcgtatcggtgttg 622  Q
    |||| |||||||||||||||||||||  || |||||||| |||||||| ||||||  ||||| |||||||||||    
T  27471627 ccgataccgctaataatttgagaaaag-cacataattcagtgtaattacatgtgttggtgtcatatcggtgttg 27471555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 551 - 612
Target Start/End: Original strand, 34371714 - 34371773
Alignment:
Q  551 gacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcgt 612  Q
    |||||||||||||||| |||||||| || |||||||| |||||||||||||||| |||||||    
T  34371714 gacaccgctaataatt-gagaaaat-cacataattcagtgtaattatatgtgtcggtgtcgt 34371773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 551 - 612
Target Start/End: Complemental strand, 48148097 - 48148036
Alignment:
Q  551 gacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcgt 612  Q
    ||||||||||||||||| | ||||  ||||||||||| ||||||||||| |||| |||||||    
T  48148097 gacaccgctaataattttaaaaaaatcatataattcagtgtaattatatatgtcggtgtcgt 48148036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 549 - 609
Target Start/End: Complemental strand, 1864941 - 1864882
Alignment:
Q  549 ccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgt 609  Q
    ||||||| | ||||||||||||||||| || |||||||| |||||||||||||||| ||||    
T  1864941 ccgacacagttaataatttgagaaaat-cacataattcagtgtaattatatgtgtcggtgt 1864882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 552 - 671
Target Start/End: Original strand, 10233254 - 10233373
Alignment:
Q  552 acaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtg-tcgtatcggtgttgcgtgtccgacactgggacacgtctaatt 650  Q
    ||||| ||||||| |||||||||| || |||||||| |||||||||||||||| ||| | || |||||||   |||||||||||  ||||||  |||||     
T  10233254 acaccactaataaattgagaaaat-cacataattcagtgtaattatatgtgtctgtgttggtgtcggtgtcatgtgtccgacaccaggacacacctaatc 10233352  T
Q  651 caaggagtgttcgtgcttcat 671  Q
      |||||||| ||||||||||    
T  10233353 agaggagtgtccgtgcttcat 10233373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 551 - 603
Target Start/End: Complemental strand, 17425152 - 17425101
Alignment:
Q  551 gacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgt 603  Q
    ||||||| ||||||||||| ||||| || ||||||||||||||||||||||||    
T  17425152 gacaccgataataatttgataaaat-cacataattcaatgtaattatatgtgt 17425101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 547 - 611
Target Start/End: Complemental strand, 29163444 - 29163381
Alignment:
Q  547 cgccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcg 611  Q
    ||||||||||||||| |||||  |||||| || |||||||||| |||||||||||||| ||||||    
T  29163444 cgccgacaccgctaaaaatttaggaaaat-cacataattcaatttaattatatgtgtcggtgtcg 29163381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 547 - 611
Target Start/End: Complemental strand, 39953209 - 39953146
Alignment:
Q  547 cgccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcg 611  Q
    ||||||||||||||||||||| ||||||| || |||||| | ||||||| |||||||| ||||||    
T  39953209 cgccgacaccgctaataattttagaaaat-cacataatttagtgtaattgtatgtgtcggtgtcg 39953146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 551 - 611
Target Start/End: Original strand, 40181871 - 40181930
Alignment:
Q  551 gacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcg 611  Q
    ||||| ||||||||||||||||||| || |||||||| ||||||||||||| || ||||||    
T  40181871 gacactgctaataatttgagaaaat-cacataattcagtgtaattatatgtatcggtgtcg 40181930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 547 - 611
Target Start/End: Original strand, 52903245 - 52903308
Alignment:
Q  547 cgccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcg 611  Q
    |||||| |||| ||||||||| | ||||| ||||||||||| |||||||||||||||| ||||||    
T  52903245 cgccgataccgttaataatttaataaaat-catataattcagtgtaattatatgtgtcggtgtcg 52903308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 547 - 610
Target Start/End: Complemental strand, 2896184 - 2896122
Alignment:
Q  547 cgccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtc 610  Q
    ||||||||||||||||||||||||||||| || |||||||| ||||  ||||| |||| |||||    
T  2896184 cgccgacaccgctaataatttgagaaaat-cacataattcagtgtagctatatatgtcggtgtc 2896122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 547 - 610
Target Start/End: Complemental strand, 5898329 - 5898267
Alignment:
Q  547 cgccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtc 610  Q
    ||||||||||||||||||| ||| ||||| || |||||||| |||||||||||| ||| |||||    
T  5898329 cgccgacaccgctaataatctgaaaaaat-cacataattcagtgtaattatatgcgtcggtgtc 5898267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 552 - 611
Target Start/End: Complemental strand, 5927398 - 5927340
Alignment:
Q  552 acaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcg 611  Q
    |||| ||||||||||||| ||||| ||||||||| |||||||||| | ||||||||||||    
T  5927398 acactgctaataatttgaaaaaat-catataatttaatgtaattacaagtgtcagtgtcg 5927340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 547 - 602
Target Start/End: Complemental strand, 12443523 - 12443469
Alignment:
Q  547 cgccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtg 602  Q
    ||||||||| ||||||||||||||||||| || |||||||| ||||||| ||||||    
T  12443523 cgccgacacagctaataatttgagaaaat-cacataattcagtgtaattgtatgtg 12443469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 559 - 622
Target Start/End: Complemental strand, 16164366 - 16164304
Alignment:
Q  559 taataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcgtatcggtgttg 622  Q
    ||||||||||| ||||| || |||||| ||||||||||||||||||| |||||| | |||||||    
T  16164366 taataatttgaaaaaat-cacataatttaatgtaattatatgtgtcattgtcgtgttggtgttg 16164304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 547 - 601
Target Start/End: Complemental strand, 8842777 - 8842724
Alignment:
Q  547 cgccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgt 601  Q
    ||||| |||| ||| ||||||||||||| |||||||||| |||||||||||||||    
T  8842777 cgccggcaccactagtaatttgagaaaa-acatataatttaatgtaattatatgt 8842724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 554 - 620
Target Start/End: Original strand, 21038086 - 21038151
Alignment:
Q  554 accgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcgtatcggtgt 620  Q
    |||||||||||||| |||||||  | |||||||| |||||| ||||| ||||||||||| |||||||    
T  21038086 accgctaataatttaagaaaatt-acataattcagtgtaatcatatgcgtcagtgtcgtgtcggtgt 21038151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 551 - 609
Target Start/End: Complemental strand, 30847779 - 30847722
Alignment:
Q  551 gacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgt 609  Q
    ||||| ||||||||||||| |||||  | ||||||||||||||| ||||||||||||||    
T  30847779 gacactgctaataatttgaaaaaatg-acataattcaatgtaatcatatgtgtcagtgt 30847722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 623 - 669
Target Start/End: Complemental strand, 48040464 - 48040418
Alignment:
Q  623 cgtgtccgacactgggacacgtctaattcaaggagtgttcgtgcttc 669  Q
    ||||||||||||||||||||| ||||||  |||||||| ||||||||    
T  48040464 cgtgtccgacactgggacacgcctaattggaggagtgtccgtgcttc 48040418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 547 - 596
Target Start/End: Original strand, 1262880 - 1262928
Alignment:
Q  547 cgccgacaccgctaataatttgagaaaatacatataattcaatgtaatta 596  Q
    ||||||||| ||||||||||||||||||| || |||||||||| ||||||    
T  1262880 cgccgacacagctaataatttgagaaaat-cacataattcaatataatta 1262928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 549 - 598
Target Start/End: Original strand, 34298434 - 34298482
Alignment:
Q  549 ccgacaccgctaataatttgagaaaatacatataattcaatgtaattata 598  Q
    |||||||| |||||||||||||||||| || |||||||| ||||||||||    
T  34298434 ccgacaccactaataatttgagaaaat-cacataattcagtgtaattata 34298482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 550 - 611
Target Start/End: Complemental strand, 38078721 - 38078661
Alignment:
Q  550 cgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcg 611  Q
    |||||| ||||||||||||| ||||| || ||||||||||||||||| | ||||| ||||||    
T  38078721 cgacacagctaataatttgaaaaaat-cacataattcaatgtaattacaagtgtcggtgtcg 38078661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 622 - 671
Target Start/End: Complemental strand, 46940799 - 46940750
Alignment:
Q  622 gcgtgtccgacactgggacacgtctaattcaaggagtgttcgtgcttcat 671  Q
    ||||||||||||| || ||||| ||||| | |||||||||||||||||||    
T  46940799 gcgtgtccgacaccggaacacgcctaatccgaggagtgttcgtgcttcat 46940750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 52; Significance: 3e-20; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 547 - 622
Target Start/End: Original strand, 32308116 - 32308190
Alignment:
Q  547 cgccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcgtatcggtgttg 622  Q
    ||||||||||||||||||||||||||||| || |||||||| ||||||| |||||||||||||||| |||||||||    
T  32308116 cgccgacaccgctaataatttgagaaaat-cacataattcagtgtaattgtatgtgtcagtgtcgtgtcggtgttg 32308190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 548 - 617
Target Start/End: Original strand, 5548673 - 5548741
Alignment:
Q  548 gccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcgtatcgg 617  Q
    |||||||||||| ||||||||||||||| || |||||||| |||||||||||||||||||||||| ||||    
T  5548673 gccgacaccgctgataatttgagaaaat-caaataattcagtgtaattatatgtgtcagtgtcgtgtcgg 5548741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 547 - 610
Target Start/End: Original strand, 19206046 - 19206108
Alignment:
Q  547 cgccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtc 610  Q
    ||||||||||||||||||||||||||||| || |||||||| | |||||||||||||| |||||    
T  19206046 cgccgacaccgctaataatttgagaaaat-cacataattcattataattatatgtgtcggtgtc 19206108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 551 - 610
Target Start/End: Complemental strand, 42720949 - 42720891
Alignment:
Q  551 gacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtc 610  Q
    ||||||||||||||||||| ||||| || |||||| ||||||||||||||||||||||||    
T  42720949 gacaccgctaataatttgaaaaaat-cacataattaaatgtaattatatgtgtcagtgtc 42720891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 549 - 611
Target Start/End: Original strand, 20549789 - 20549850
Alignment:
Q  549 ccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcg 611  Q
    ||||||||||||||||||||||||||| ||  ||||||| |||||||||||||||| ||||||    
T  20549789 ccgacaccgctaataatttgagaaaat-cacgtaattcagtgtaattatatgtgtcggtgtcg 20549850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 551 - 604
Target Start/End: Complemental strand, 3520401 - 3520349
Alignment:
Q  551 gacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtc 604  Q
    ||||||| |||| |||||||||||| ||||||||||||||||||||||||||||    
T  3520401 gacaccgataatcatttgagaaaat-catataattcaatgtaattatatgtgtc 3520349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 547 - 607
Target Start/End: Original strand, 22868038 - 22868097
Alignment:
Q  547 cgccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagt 607  Q
    |||||||||| |||||||| ||||||||| || |||||||| |||||||||||||||||||    
T  22868038 cgccgacaccactaataatatgagaaaat-cacataattcagtgtaattatatgtgtcagt 22868097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 547 - 610
Target Start/End: Original strand, 5835243 - 5835305
Alignment:
Q  547 cgccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtc 610  Q
    |||||||||| |||||| |||||||||||| | |||||||| |||||||||||||||| |||||    
T  5835243 cgccgacaccactaatagtttgagaaaata-acataattcagtgtaattatatgtgtcggtgtc 5835305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 547 - 610
Target Start/End: Original strand, 23191892 - 23191954
Alignment:
Q  547 cgccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtc 610  Q
    ||||||||||||||||||||||||||||| || ||| |||| |||||||| |||| ||||||||    
T  23191892 cgccgacaccgctaataatttgagaaaat-cacatatttcagtgtaattacatgtttcagtgtc 23191954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 550 - 616
Target Start/End: Original strand, 2034440 - 2034505
Alignment:
Q  550 cgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcgtatcg 616  Q
    ||||||| ||||||||||||||| || ||||||||| | ||||  ||||||||||||||||||||||    
T  2034440 cgacaccactaataatttgagaatat-catataatttagtgtatatatatgtgtcagtgtcgtatcg 2034505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 547 - 597
Target Start/End: Complemental strand, 29787432 - 29787383
Alignment:
Q  547 cgccgacaccgctaataatttgagaaaatacatataattcaatgtaattat 597  Q
    ||||||||||||||||||||||||||||| || |||||||| |||||||||    
T  29787432 cgccgacaccgctaataatttgagaaaat-cacataattcagtgtaattat 29787383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 547 - 671
Target Start/End: Original strand, 1433450 - 1433576
Alignment:
Q  547 cgccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcgtatcgg---tgttgcgtgtccgacactgggacacg 643  Q
    ||||||||||| ||||||||||||||||| || || |||   |||||||||||||||| ||||||| ||||    |    |||||||||||  |||||||    
T  1433450 cgccgacaccgttaataatttgagaaaat-cacatcatttggtgtaattatatgtgtcggtgtcgtgtcggacaagacatgtgtccgacaccaggacacg 1433548  T
Q  644 tctaattcaaggagtgttcgtgcttcat 671  Q
    |||||| | |||||||| ||||||||||    
T  1433549 tctaatccgaggagtgtccgtgcttcat 1433576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 547 - 612
Target Start/End: Complemental strand, 22602773 - 22602709
Alignment:
Q  547 cgccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcgt 612  Q
    |||||||||||  ||| |||||||||||| || |||||||| |||||||||||||||| |||||||    
T  22602773 cgccgacaccgtaaattatttgagaaaat-cacataattcagtgtaattatatgtgtcggtgtcgt 22602709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 547 - 620
Target Start/End: Original strand, 24339638 - 24339710
Alignment:
Q  547 cgccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcgtatcggtgt 620  Q
    ||||||||| ||||||||||||| ||||| || |||||||| |||||||| | ||||| ||||||| |||||||    
T  24339638 cgccgacacagctaataatttgaaaaaat-cacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgt 24339710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 547 - 620
Target Start/End: Complemental strand, 26329445 - 26329373
Alignment:
Q  547 cgccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcgtatcggtgt 620  Q
    |||||||| || |||||||||||||||| ||| | |||||| |||||||||||||||| | ||||| |||||||    
T  26329445 cgccgacatcgttaataatttgagaaaa-acacacaattcagtgtaattatatgtgtcggcgtcgtgtcggtgt 26329373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 707 - 824
Target Start/End: Complemental strand, 48157241 - 48157125
Alignment:
Q  707 cttatttgtataataaaagaaaaattgaagttaaattgttttcatatttagctataagttgtttttaaaagctattcggggaaacttataaaaatcagct 806  Q
    ||||||| |||||||||||| ||| | |||| |||||||||| ||| | |||||||| ||||||| | ||||||||||||  | |||||  |||| ||||    
T  48157241 cttatttctataataaaagataaaataaagtgaaattgttttaata-taagctataatttgttttcacaagctattcgggagatcttatggaaataagct 48157143  T
Q  807 gaagacagtttgtggaca 824  Q
    ||| |||| || ||||||    
T  48157142 gaaaacagcttatggaca 48157125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 623 - 671
Target Start/End: Original strand, 9778574 - 9778622
Alignment:
Q  623 cgtgtccgacactgggacacgtctaattcaaggagtgttcgtgcttcat 671  Q
    |||||||||||| |||||||| ||||| |||||||||| ||||||||||    
T  9778574 cgtgtccgacaccgggacacgcctaatccaaggagtgtccgtgcttcat 9778622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 623 - 671
Target Start/End: Original strand, 15680878 - 15680926
Alignment:
Q  623 cgtgtccgacactgggacacgtctaattcaaggagtgttcgtgcttcat 671  Q
    |||||||||||| | |||||||||||||| |||||||| ||||||||||    
T  15680878 cgtgtccgacaccgagacacgtctaattcgaggagtgtccgtgcttcat 15680926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 623 - 671
Target Start/End: Original strand, 21864877 - 21864925
Alignment:
Q  623 cgtgtccgacactgggacacgtctaattcaaggagtgttcgtgcttcat 671  Q
    |||||||||||| |||||||||||||||| ||||||||  |||||||||    
T  21864877 cgtgtccgacaccgggacacgtctaattcgaggagtgtctgtgcttcat 21864925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 549 - 612
Target Start/End: Original strand, 49107819 - 49107880
Alignment:
Q  549 ccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcgt 612  Q
    |||||||||||||||||||||||||  ||| |||||| | ||| |||||||||||| |||||||    
T  49107819 ccgacaccgctaataatttgagaaa--acacataattgagtgtgattatatgtgtcggtgtcgt 49107880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 557 - 612
Target Start/End: Complemental strand, 7328744 - 7328690
Alignment:
Q  557 gctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcgt 612  Q
    |||||||||||||||||||| | |||||| | |||||||||||||||| |||||||    
T  7328744 gctaataatttgagaaaata-acataatttagtgtaattatatgtgtcggtgtcgt 7328690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 554 - 609
Target Start/End: Original strand, 17851434 - 17851488
Alignment:
Q  554 accgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgt 609  Q
    |||||||||||||| ||||||| || |||||||| |||||||||||||||| ||||    
T  17851434 accgctaataattttagaaaat-cacataattcagtgtaattatatgtgtctgtgt 17851488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 557 - 619
Target Start/End: Complemental strand, 3142131 - 3142070
Alignment:
Q  557 gctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcgtatcggtg 619  Q
    |||||||| ||||| |||| |||||||||||||||||| ||||||||| |||| || ||||||    
T  3142131 gctaataaattgagtaaat-catataattcaatgtaatcatatgtgtcggtgttgtgtcggtg 3142070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 629 - 671
Target Start/End: Original strand, 7438792 - 7438834
Alignment:
Q  629 cgacactgggacacgtctaattcaaggagtgttcgtgcttcat 671  Q
    ||||||| ||||||| |||||||||||||||| ||||||||||    
T  7438792 cgacactaggacacgcctaattcaaggagtgtccgtgcttcat 7438834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 549 - 611
Target Start/End: Original strand, 9482932 - 9482993
Alignment:
Q  549 ccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcg 611  Q
    |||||| |||| ||||||||||||||| || | |||||| |||||||||||||||| ||||||    
T  9482932 ccgacatcgctgataatttgagaaaat-cacacaattcagtgtaattatatgtgtcggtgtcg 9482993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 547 - 620
Target Start/End: Complemental strand, 11272651 - 11272577
Alignment:
Q  547 cgccgacaccgctaataatttgagaaaat-acatataattcaatgtaattatatgtgtcagtgtcgtatcggtgt 620  Q
    |||||||||  || ||||||||| ||||| |||||||||||| |||||||| | ||||| ||||||| |||||||    
T  11272651 cgccgacacaactgataatttgaaaaaatcacatataattcagtgtaattacaagtgtcggtgtcgtgtcggtgt 11272577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 551 - 613
Target Start/End: Original strand, 19992001 - 19992062
Alignment:
Q  551 gacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcgta 613  Q
    ||||| ||||||||||||||||||| || ||| |||| |||||||||| ||||| ||||||||    
T  19992001 gacacagctaataatttgagaaaat-cacatatttcagtgtaattataagtgtcggtgtcgta 19992062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 547 - 609
Target Start/End: Complemental strand, 21828468 - 21828407
Alignment:
Q  547 cgccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgt 609  Q
    ||||||||||| || |||||||||||||| || ||||| || ||||||| |||||||||||||    
T  21828468 cgccgacaccgttagtaatttgagaaaat-cacataatccattgtaattgtatgtgtcagtgt 21828407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 547 - 604
Target Start/End: Complemental strand, 6630975 - 6630919
Alignment:
Q  547 cgccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtc 604  Q
    |||||||||| |||||||||||||||| | ||  ||||||| ||||||||||||||||    
T  6630975 cgccgacaccactaataatttgagaaagt-cacttaattcagtgtaattatatgtgtc 6630919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 557 - 610
Target Start/End: Original strand, 24146822 - 24146874
Alignment:
Q  557 gctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtc 610  Q
    ||||||||||| ||||||| || |||||||||| |||||||||||||| |||||    
T  24146822 gctaataattttagaaaat-cacataattcaatataattatatgtgtcggtgtc 24146874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 547 - 612
Target Start/End: Original strand, 25791649 - 25791712
Alignment:
Q  547 cgccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcgt 612  Q
    |||||||||||||||| ||||||| |||| || |||| |||||||| ||||||||||| |||||||    
T  25791649 cgccgacaccgctaattatttgag-aaattcacataa-tcaatgtagttatatgtgtcggtgtcgt 25791712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 550 - 611
Target Start/End: Original strand, 26733303 - 26733363
Alignment:
Q  550 cgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcg 611  Q
    |||||||||||||||||||| ||||| || |||||||| | |||||| ||||||| ||||||    
T  26733303 cgacaccgctaataatttgacaaaat-cacataattcagtctaattaaatgtgtcggtgtcg 26733363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 547 - 612
Target Start/End: Original strand, 27945037 - 27945101
Alignment:
Q  547 cgccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcgt 612  Q
    |||||||||| ||||||||||||||||||  | |||||||| |||||||| | ||||| |||||||    
T  27945037 cgccgacaccactaataatttgagaaaat-tacataattcagtgtaattacaagtgtcggtgtcgt 27945101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 550 - 611
Target Start/End: Complemental strand, 32287523 - 32287463
Alignment:
Q  550 cgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcg 611  Q
    |||||||||||||||| ||||||||| || |||||||| || || |||||||||| ||||||    
T  32287523 cgacaccgctaataatctgagaaaat-cacataattcagtgcaagtatatgtgtcggtgtcg 32287463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 547 - 612
Target Start/End: Original strand, 35861960 - 35862024
Alignment:
Q  547 cgccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcgt 612  Q
    |||||||||  |||||||||||| ||||| || |||||||||||||||| || ||||| |||||||    
T  35861960 cgccgacacaactaataatttgaaaaaat-cacataattcaatgtaattgtaagtgtctgtgtcgt 35862024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 551 - 604
Target Start/End: Complemental strand, 38134465 - 38134413
Alignment:
Q  551 gacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtc 604  Q
    ||||||| |||||||||||||||||  | ||||||||||||||| |||||||||    
T  38134465 gacaccgataataatttgagaaaatg-acataattcaatgtaatcatatgtgtc 38134413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 49; Significance: 2e-18; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 580 - 671
Target Start/End: Complemental strand, 34994013 - 34993924
Alignment:
Q  580 ataattcaatgtaattatatgtgtcagtgtcgtatcggtgttgcgtgtccgacactgggacacgtctaattcaaggagtgttcgtgcttcat 671  Q
    |||||||||||||||||||||||||||||||| |   |   ||  ||||||||||||||||||| |||||||||||||||||||||||||||    
T  34994013 ataattcaatgtaattatatgtgtcagtgtcgaacacgacatg--tgtccgacactgggacacgcctaattcaaggagtgttcgtgcttcat 34993924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 547 - 671
Target Start/End: Complemental strand, 15909695 - 15909572
Alignment:
Q  547 cgccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcgtatcggtgttgcgtgtccgacactgggacacgtct 646  Q
    |||||| || ||||| | |||||||||||  | |||||||| |||||||||||||| ||||||||| | || ||   ||||||||||| |||||||| ||    
T  15909695 cgccgatacagctaaaattttgagaaaatt-acataattcagtgtaattatatgtgacagtgtcgtgtaggcgtattgtgtccgacacagggacacgcct 15909597  T
Q  647 aattcaaggagtgttcgtgcttcat 671  Q
    ||||| | |||||||||||||||||    
T  15909596 aattcgaagagtgttcgtgcttcat 15909572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 547 - 603
Target Start/End: Original strand, 21616758 - 21616813
Alignment:
Q  547 cgccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgt 603  Q
    ||||||||||||||||||||||||||||| || |||||||| |||||||||||||||    
T  21616758 cgccgacaccgctaataatttgagaaaat-cacataattcagtgtaattatatgtgt 21616813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 551 - 622
Target Start/End: Original strand, 44860320 - 44860390
Alignment:
Q  551 gacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcgtatcggtgttg 622  Q
    ||||||||||||||||||||||||| |  |||||||| |||||||||||||||| ||||||| | |||||||    
T  44860320 gacaccgctaataatttgagaaaat-cgcataattcagtgtaattatatgtgtcggtgtcgtgttggtgttg 44860390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 547 - 620
Target Start/End: Complemental strand, 16069317 - 16069245
Alignment:
Q  547 cgccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcgtatcggtgt 620  Q
    ||||||||||| ||||||||| | ||||| ||||||||||| ||||||||| |||| || ||||||||||||||    
T  16069317 cgccgacaccgttaataatttaaaaaaat-catataattcagtgtaattatttgtgacaatgtcgtatcggtgt 16069245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 552 - 671
Target Start/End: Complemental strand, 18631465 - 18631353
Alignment:
Q  552 acaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcgtatcggtgttgcgtgtccgacactgggacacgtctaattc 651  Q
    ||||| |||||||||||| ||||  || || ||||||||||||||||||| ||||| ||||||||       ||||| |||||||||||||| ||||| |    
T  18631465 acacctctaataatttgaaaaaaatcacatcattcaatgtaattatatgtatcagtatcgtatcg-------gtgtcagacactgggacacgcctaatgc 18631373  T
Q  652 aaggagtgttcgtgcttcat 671  Q
     |||||||| || |||||||    
T  18631372 gaggagtgtccgagcttcat 18631353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 554 - 611
Target Start/End: Complemental strand, 34691861 - 34691805
Alignment:
Q  554 accgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcg 611  Q
    |||||||||||||||| ||||| ||||||||||| |||||||||||||||| ||||||    
T  34691861 accgctaataatttgataaaat-catataattcagtgtaattatatgtgtcggtgtcg 34691805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 554 - 611
Target Start/End: Complemental strand, 34714273 - 34714217
Alignment:
Q  554 accgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcg 611  Q
    |||||||||||||||| ||||| ||||||||||| |||||||||||||||| ||||||    
T  34714273 accgctaataatttgataaaat-catataattcagtgtaattatatgtgtcggtgtcg 34714217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 549 - 609
Target Start/End: Original strand, 31808075 - 31808134
Alignment:
Q  549 ccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgt 609  Q
    ||||||||||||||||||| | ||||| || |||||||| |||||||||||||||||||||    
T  31808075 ccgacaccgctaataatttaacaaaat-cacataattcagtgtaattatatgtgtcagtgt 31808134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 548 - 604
Target Start/End: Complemental strand, 37411306 - 37411251
Alignment:
Q  548 gccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtc 604  Q
    |||||||||||||||||||||||||||| || |||||||| ||| ||||||||||||    
T  37411306 gccgacaccgctaataatttgagaaaat-cacataattcagtgtgattatatgtgtc 37411251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 552 - 611
Target Start/End: Original strand, 18570973 - 18571031
Alignment:
Q  552 acaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcg 611  Q
    |||||| |||||||||||||||||  | ||||||||||||||| ||||||||||||||||    
T  18570973 acaccgataataatttgagaaaatg-acataattcaatgtaatcatatgtgtcagtgtcg 18571031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 549 - 604
Target Start/End: Original strand, 23718024 - 23718078
Alignment:
Q  549 ccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtc 604  Q
    ||||||||||||||||||||||||| | || |||||||| ||||||||||||||||    
T  23718024 ccgacaccgctaataatttgagaaagt-cacataattcagtgtaattatatgtgtc 23718078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 549 - 604
Target Start/End: Original strand, 24105696 - 24105750
Alignment:
Q  549 ccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtc 604  Q
    ||||||||||||||||||||||||| | || |||||||| ||||||||||||||||    
T  24105696 ccgacaccgctaataatttgagaaagt-cacataattcagtgtaattatatgtgtc 24105750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 548 - 610
Target Start/End: Original strand, 18276518 - 18276579
Alignment:
Q  548 gccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtc 610  Q
    |||||||||||||||||||||||||||| ||  ||||||| ||||||||| |||||| |||||    
T  18276518 gccgacaccgctaataatttgagaaaat-cacttaattcagtgtaattatgtgtgtcggtgtc 18276579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 550 - 612
Target Start/End: Complemental strand, 24975385 - 24975324
Alignment:
Q  550 cgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcgt 612  Q
    |||||||||||||||||||||||||| | ||||||||| ||||| |||||| ||| |||||||    
T  24975385 cgacaccgctaataatttgagaaaat-cgtataattcagtgtaaatatatgcgtcggtgtcgt 24975324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 547 - 601
Target Start/End: Original strand, 28677905 - 28677958
Alignment:
Q  547 cgccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgt 601  Q
    ||||||||||||||||||||||| ||||| || |||||||| |||||||||||||    
T  28677905 cgccgacaccgctaataatttgaaaaaat-cacataattcagtgtaattatatgt 28677958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 547 - 616
Target Start/End: Original strand, 2423865 - 2423933
Alignment:
Q  547 cgccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcgtatcg 616  Q
    |||||||  |||||| ||||||||||||| ||||||||| | | |||||||||| |||||||||||||||    
T  2423865 cgccgacgacgctaaaaatttgagaaaat-catataatttagtataattatatgagtcagtgtcgtatcg 2423933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 623 - 668
Target Start/End: Original strand, 12224292 - 12224337
Alignment:
Q  623 cgtgtccgacactgggacacgtctaattcaaggagtgttcgtgctt 668  Q
    ||||||||||||||||||||| ||||| ||||||||||| ||||||    
T  12224292 cgtgtccgacactgggacacgcctaatccaaggagtgtttgtgctt 12224337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 550 - 610
Target Start/End: Complemental strand, 18512202 - 18512143
Alignment:
Q  550 cgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtc 610  Q
    |||||||| ||| | |||||||||||| ||||||||||||||||| | |||||||||||||    
T  18512202 cgacaccgataaaattttgagaaaata-atataattcaatgtaatcacatgtgtcagtgtc 18512143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 555 - 603
Target Start/End: Original strand, 22556964 - 22557012
Alignment:
Q  555 ccgctaataatttgagaaaatacatataattcaatgtaattatatgtgt 603  Q
    ||||||||||||||| || |  |||||||||||||||||||||||||||    
T  22556964 ccgctaataatttgaaaataatcatataattcaatgtaattatatgtgt 22557012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 623 - 671
Target Start/End: Original strand, 26769591 - 26769639
Alignment:
Q  623 cgtgtccgacactgggacacgtctaattcaaggagtgttcgtgcttcat 671  Q
    ||||||||||||||||||||| ||||| | |||||||| ||||||||||    
T  26769591 cgtgtccgacactgggacacgcctaatccgaggagtgtccgtgcttcat 26769639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 549 - 592
Target Start/End: Original strand, 27084260 - 27084302
Alignment:
Q  549 ccgacaccgctaataatttgagaaaatacatataattcaatgta 592  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||    
T  27084260 ccgacactgctaataatttgagaaaat-catataattcaatgta 27084302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 577 - 620
Target Start/End: Original strand, 35056893 - 35056936
Alignment:
Q  577 catataattcaatgtaattatatgtgtcagtgtcgtatcggtgt 620  Q
    ||||||||||| |||||||||||||||| ||||||| |||||||    
T  35056893 catataattcagtgtaattatatgtgtcggtgtcgtgtcggtgt 35056936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 549 - 610
Target Start/End: Complemental strand, 42832337 - 42832277
Alignment:
Q  549 ccgacaccgctaataatttgagaaaa-tacatataattcaatgtaattatatgtgtcagtgtc 610  Q
    |||||||||||||||||||||||||| |||||||  |||| |||||||||| ||||| |||||    
T  42832337 ccgacaccgctaataatttgagaaaattacatat--ttcagtgtaattataagtgtcggtgtc 42832277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 547 - 609
Target Start/End: Complemental strand, 18420497 - 18420436
Alignment:
Q  547 cgccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgt 609  Q
    |||| |||| ||||||||||||||||||| || ||||||||||| ||||||| ||||| ||||    
T  18420497 cgccaacactgctaataatttgagaaaat-cacataattcaatgcaattataagtgtcggtgt 18420436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 547 - 597
Target Start/End: Complemental strand, 21782881 - 21782832
Alignment:
Q  547 cgccgacaccgctaataatttgagaaaatacatataattcaatgtaattat 597  Q
    ||||||||| ||||||||||||||||||| || |||||||| |||||||||    
T  21782881 cgccgacactgctaataatttgagaaaat-cacataattcagtgtaattat 21782832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 621 - 671
Target Start/End: Original strand, 37419821 - 37419871
Alignment:
Q  621 tgcgtgtccgacactgggacacgtctaattcaaggagtgttcgtgcttcat 671  Q
    |||||||||||||| |||||||| ||||| | |||||||| ||||||||||    
T  37419821 tgcgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcat 37419871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 547 - 609
Target Start/End: Original strand, 39279671 - 39279732
Alignment:
Q  547 cgccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgt 609  Q
    |||| |||||| ||||||| ||||||||| || |||||||| |||||||||||||||| ||||    
T  39279671 cgccaacaccgttaataatatgagaaaat-caaataattcagtgtaattatatgtgtcggtgt 39279732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 559 - 609
Target Start/End: Complemental strand, 44605190 - 44605141
Alignment:
Q  559 taataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgt 609  Q
    |||||||||||||||||| | ||||||||||||||||| ||||||| ||||    
T  44605190 taataatttgagaaaata-acataattcaatgtaattacatgtgtcggtgt 44605141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 547 - 604
Target Start/End: Original strand, 896207 - 896263
Alignment:
Q  547 cgccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtc 604  Q
    ||||||||| ||||||| ||||||||||| || ||| ||||||||||| |||||||||    
T  896207 cgccgacactgctaatagtttgagaaaat-cacatatttcaatgtaatcatatgtgtc 896263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 558 - 611
Target Start/End: Original strand, 5367199 - 5367251
Alignment:
Q  558 ctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcg 611  Q
    ||||||||||||| |||| || |||||||| |||||||||||||||| ||||||    
T  5367199 ctaataatttgaggaaat-cacataattcagtgtaattatatgtgtcggtgtcg 5367251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 559 - 612
Target Start/End: Complemental strand, 15098156 - 15098104
Alignment:
Q  559 taataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcgt 612  Q
    |||||||||||||||| | || ||||| |||||||||||| |||||||||||||    
T  15098156 taataatttgagaaaaaaaat-taattgaatgtaattataagtgtcagtgtcgt 15098104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 559 - 620
Target Start/End: Complemental strand, 19613664 - 19613604
Alignment:
Q  559 taataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcgtatcggtgt 620  Q
    |||||||||||||||||| | ||||||||||||||| |||||||| ||| |||  |||||||    
T  19613664 taataatttgagaaaata-acataattcaatgtaatgatatgtgttagtatcgcgtcggtgt 19613604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 549 - 610
Target Start/End: Original strand, 21091721 - 21091781
Alignment:
Q  549 ccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtc 610  Q
    ||||||||||||||||||| |||||||| | ||| |||| |||||||| | |||||||||||    
T  21091721 ccgacaccgctaataatttaagaaaata-acatacttcagtgtaattacaagtgtcagtgtc 21091781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 557 - 598
Target Start/End: Original strand, 29664015 - 29664056
Alignment:
Q  557 gctaataatttgagaaaatacatataattcaatgtaattata 598  Q
    ||||||||||||| |||||| |||||||||| ||||||||||    
T  29664015 gctaataatttgaaaaaatatatataattcagtgtaattata 29664056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 559 - 604
Target Start/End: Complemental strand, 30527646 - 30527602
Alignment:
Q  559 taataatttgagaaaatacatataattcaatgtaattatatgtgtc 604  Q
    ||||||||||||||||| ||||||||| | ||||||||||||||||    
T  30527646 taataatttgagaaaat-catataatttagtgtaattatatgtgtc 30527602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 1e-16; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 547 - 620
Target Start/End: Complemental strand, 24362265 - 24362193
Alignment:
Q  547 cgccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcgtatcggtgt 620  Q
    ||||||||||||||||||||||||| ||| || |||||||| ||||||||||||||||| |||||| |||||||    
T  24362265 cgccgacaccgctaataatttgagagaat-cacataattcagtgtaattatatgtgtcaatgtcgtgtcggtgt 24362193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 550 - 610
Target Start/End: Complemental strand, 12606889 - 12606830
Alignment:
Q  550 cgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtc 610  Q
    |||||| ||||||||||||||||||| |||||||||||||||||||||||||||| |||||    
T  12606889 cgacactgctaataatttgagaaaat-catataattcaatgtaattatatgtgtcggtgtc 12606830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 547 - 668
Target Start/End: Original strand, 22204635 - 22204757
Alignment:
Q  547 cgccgacaccgctaataatttgagaaa-atacatataattcaatgtaattatatgtgtcagtgtcgtatcggtgttgcgtgtccgacactgggacacgtc 645  Q
    |||||||||  |||||||||| | ||| ||| |||||||||| |||||||| | |||||||||||  |   ||||  |||||||||||||| ||||||||    
T  22204635 cgccgacacaactaataatttaaaaaatatatatataattcagtgtaattacaagtgtcagtgtcagacacgtgtgtcgtgtccgacactgagacacgtc 22204734  T
Q  646 taattcaaggagtgttcgtgctt 668  Q
    |||| |||||||||||| |||||    
T  22204735 taatccaaggagtgttcatgctt 22204757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 547 - 604
Target Start/End: Complemental strand, 31236640 - 31236584
Alignment:
Q  547 cgccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtc 604  Q
    ||||||||| ||||||||||||||||||| || |||||||||||||||||||||||||    
T  31236640 cgccgacactgctaataatttgagaaaat-cacataattcaatgtaattatatgtgtc 31236584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 547 - 668
Target Start/End: Complemental strand, 31109581 - 31109463
Alignment:
Q  547 cgccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcgtatcggtgttgcgtgtccgacactgggacacgtct 646  Q
    ||||||||||| ||||||||||||||||| || | |||||| | ||| ||||||||||||||||| |   ||||  |||||  |||||||||||||| ||    
T  31109581 cgccgacaccgttaataatttgagaaaat-caaacaattcagtctaactatatgtgtcagtgtcggacatgtgt--cgtgtatgacactgggacacgcct 31109485  T
Q  647 aattcaaggagtgttcgtgctt 668  Q
    ||| | |||||||| |||||||    
T  31109484 aatccgaggagtgtccgtgctt 31109463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 550 - 604
Target Start/End: Original strand, 34897084 - 34897137
Alignment:
Q  550 cgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtc 604  Q
    |||||||||||||||||||||||||| || |||||||| ||||||||||||||||    
T  34897084 cgacaccgctaataatttgagaaaat-cacataattcagtgtaattatatgtgtc 34897137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 547 - 671
Target Start/End: Original strand, 22651972 - 22652104
Alignment:
Q  547 cgccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcgtatcggtgttg---------cgtgtccgacactgg 637  Q
    ||||||||| ||||||||||||| ||||| || |||||||||| |||||| | ||||| ||||||| ||||||| |          ||||||||||| ||    
T  22651972 cgccgacacagctaataatttgaaaaaat-cacataattcaatataattacaagtgtcggtgtcgtgtcggtgtcggacacgacatgtgtccgacaccgg 22652070  T
Q  638 gacacgtctaattcaaggagtgttcgtgcttcat 671  Q
    |||||||||||| | |||||||| ||||||||||    
T  22652071 gacacgtctaatccgaggagtgtccgtgcttcat 22652104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 549 - 601
Target Start/End: Original strand, 4611532 - 4611583
Alignment:
Q  549 ccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgt 601  Q
    |||||||||||||||||||||||||||| | |||||||| |||||||||||||    
T  4611532 ccgacaccgctaataatttgagaaaata-acataattcagtgtaattatatgt 4611583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 547 - 611
Target Start/End: Complemental strand, 13844659 - 13844596
Alignment:
Q  547 cgccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcg 611  Q
    ||||||||| ||||||||||||||||||| || |||||| | |||||||||||||||| ||||||    
T  13844659 cgccgacactgctaataatttgagaaaat-cacataattgagtgtaattatatgtgtcggtgtcg 13844596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 547 - 602
Target Start/End: Complemental strand, 39954342 - 39954288
Alignment:
Q  547 cgccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtg 602  Q
    ||||||||||||||||||||||||||||| || |||||| | ||||||||||||||    
T  39954342 cgccgacaccgctaataatttgagaaaat-cacataatttagtgtaattatatgtg 39954288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 557 - 611
Target Start/End: Original strand, 3025557 - 3025610
Alignment:
Q  557 gctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcg 611  Q
    ||||||||||||||||||| || |||||||| |||||||||| ||||||||||||    
T  3025557 gctaataatttgagaaaat-cacataattcagtgtaattataggtgtcagtgtcg 3025610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 547 - 611
Target Start/End: Complemental strand, 126412 - 126347
Alignment:
Q  547 cgccgacaccgctaataatttga-gaaaatacatataattcaatgtaattatatgtgtcagtgtcg 611  Q
    |||| |||||||||||||||||| ||||| | | | |||| |||||||||||||||||||||||||    
T  126412 cgccaacaccgctaataatttgaagaaaaaaaacacaattaaatgtaattatatgtgtcagtgtcg 126347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 547 - 612
Target Start/End: Complemental strand, 11927149 - 11927085
Alignment:
Q  547 cgccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcgt 612  Q
    ||||||||| | ||||||||||| ||||| || |||||||| |||||||||||||||| |||||||    
T  11927149 cgccgacactgttaataatttgataaaat-cacataattcagtgtaattatatgtgtcggtgtcgt 11927085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 547 - 604
Target Start/End: Original strand, 27213543 - 27213599
Alignment:
Q  547 cgccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtc 604  Q
    ||||||||| ||||||||||| ||||||| || |||||||| ||||||||||||||||    
T  27213543 cgccgacactgctaataatttcagaaaat-cacataattcactgtaattatatgtgtc 27213599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 547 - 611
Target Start/End: Complemental strand, 4786401 - 4786338
Alignment:
Q  547 cgccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcg 611  Q
    ||||||||||  ||||||||| ||||||| || |||||||| |||||||||||||||| ||||||    
T  4786401 cgccgacaccattaataatttaagaaaat-cacataattcagtgtaattatatgtgtcggtgtcg 4786338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 552 - 604
Target Start/End: Complemental strand, 20785523 - 20785472
Alignment:
Q  552 acaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtc 604  Q
    ||||||||||||||||||| |||| || |||||| ||||||||||||||||||    
T  20785523 acaccgctaataatttgaggaaat-cacataatttaatgtaattatatgtgtc 20785472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 547 - 609
Target Start/End: Original strand, 7658459 - 7658520
Alignment:
Q  547 cgccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgt 609  Q
    |||||||||| ||||||||||||||||||  | |||||||| ||||||||||| |||| ||||    
T  7658459 cgccgacaccactaataatttgagaaaat-tacataattcagtgtaattatatttgtcggtgt 7658520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 625 - 671
Target Start/End: Original strand, 13397622 - 13397668
Alignment:
Q  625 tgtccgacactgggacacgtctaattcaaggagtgttcgtgcttcat 671  Q
    |||||||||| | |||||| |||||||||||||||| ||||||||||    
T  13397622 tgtccgacaccgagacacgcctaattcaaggagtgtccgtgcttcat 13397668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 621 - 671
Target Start/End: Original strand, 44067594 - 44067644
Alignment:
Q  621 tgcgtgtccgacactgggacacgtctaattcaaggagtgttcgtgcttcat 671  Q
    ||||||||||||||  ||||||| ||||||| |||||||| ||||||||||    
T  44067594 tgcgtgtccgacaccaggacacgcctaattcgaggagtgtccgtgcttcat 44067644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 559 - 604
Target Start/End: Complemental strand, 8798882 - 8798838
Alignment:
Q  559 taataatttgagaaaatacatataattcaatgtaattatatgtgtc 604  Q
    |||||||||||||||||| | |||||||||| ||||||||||||||    
T  8798882 taataatttgagaaaata-acataattcaatataattatatgtgtc 8798838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 547 - 612
Target Start/End: Original strand, 11944661 - 11944725
Alignment:
Q  547 cgccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcgt 612  Q
    ||||||||| | ||||||||||| ||||| || |||| ||| |||||||||||||||| |||||||    
T  11944661 cgccgacactgttaataatttgataaaat-cacataactcagtgtaattatatgtgtcggtgtcgt 11944725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 548 - 597
Target Start/End: Complemental strand, 24017500 - 24017452
Alignment:
Q  548 gccgacaccgctaataatttgagaaaatacatataattcaatgtaattat 597  Q
    ||||||| | |||||||||||||| ||| |||||||||||||||||||||    
T  24017500 gccgacatcactaataatttgagacaat-catataattcaatgtaattat 24017452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 550 - 603
Target Start/End: Original strand, 36934669 - 36934721
Alignment:
Q  550 cgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgt 603  Q
    ||||||||||||||||| || ||||| || |||||||| |||||||||||||||    
T  36934669 cgacaccgctaataattcgaaaaaat-cacataattcattgtaattatatgtgt 36934721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 46; Significance: 1e-16; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 547 - 620
Target Start/End: Complemental strand, 8039898 - 8039826
Alignment:
Q  547 cgccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcgtatcggtgt 620  Q
    |||| ||||||||||||||||||||||||  |||||||||| |||||||||||||||| ||||||| |||||||    
T  8039898 cgccaacaccgctaataatttgagaaaatt-atataattcagtgtaattatatgtgtcggtgtcgtgtcggtgt 8039826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 547 - 611
Target Start/End: Original strand, 8383253 - 8383316
Alignment:
Q  547 cgccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcg 611  Q
    ||||||||||||||||||||||||||||| ||||||||||| |||||||||| ||||| ||||||    
T  8383253 cgccgacaccgctaataatttgagaaaat-catataattcagtgtaattataagtgtcggtgtcg 8383316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 549 - 611
Target Start/End: Original strand, 7928448 - 7928509
Alignment:
Q  549 ccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcg 611  Q
    ||||||||||||||||||||| ||||| || |||||||| |||||||||||||||| ||||||    
T  7928448 ccgacaccgctaataatttgaaaaaat-cacataattcagtgtaattatatgtgtcggtgtcg 7928509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 554 - 611
Target Start/End: Complemental strand, 49505210 - 49505154
Alignment:
Q  554 accgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcg 611  Q
    |||||||||||||||||||||| || |||||| | |||||||||||||||||||||||    
T  49505210 accgctaataatttgagaaaat-cacataatttagtgtaattatatgtgtcagtgtcg 49505154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 549 - 671
Target Start/End: Complemental strand, 4466661 - 4466542
Alignment:
Q  549 ccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcgtatcggtgttgcgtgtccgacactgggacacgtctaa 648  Q
    ||||||||| ||||||||| ||||||| ||||||||||| ||||  |||||||| | |||||| ||    | ||  ||||||||||||||||||| || |    
T  4466661 ccgacaccggtaataatttaagaaaat-catataattcagtgtagctatatgtgccggtgtcggatacaagatg--tgtccgacactgggacacggctta 4466565  T
Q  649 ttcaaggagtgttcgtgcttcat 671  Q
    ||| |||||||| ||||||||||    
T  4466564 ttcgaggagtgtccgtgcttcat 4466542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 547 - 671
Target Start/End: Original strand, 10455786 - 10455913
Alignment:
Q  547 cgccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcgtatcggtgttgcg----tgtccgacactgggacac 642  Q
    |||| |||| ||||||||| ||||||||| ||||||| | | |||||||||||||||  ||||||| |  |||| | |    ||||||||||||||||||    
T  10455786 cgccaacactgctaataatatgagaaaat-catataactaagtgtaattatatgtgttggtgtcgtgttagtgtcgagcatgtgtccgacactgggacac 10455884  T
Q  643 gtctaattcaaggagtgttcgtgcttcat 671  Q
    || |||| ||||||||||  |||||||||    
T  10455885 gtttaatccaaggagtgtatgtgcttcat 10455913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 549 - 612
Target Start/End: Complemental strand, 11313861 - 11313799
Alignment:
Q  549 ccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcgt 612  Q
    ||||||| ||||||||||||||||||| || |||||| | ||||||||||||||| ||||||||    
T  11313861 ccgacactgctaataatttgagaaaat-cacataatttagtgtaattatatgtgttagtgtcgt 11313799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 549 - 620
Target Start/End: Complemental strand, 16192811 - 16192741
Alignment:
Q  549 ccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcgtatcggtgt 620  Q
    ||||||||| |||||||||||||||||| | |||||||| |||||||||||||||   |||||| |||||||    
T  16192811 ccgacaccgttaataatttgagaaaata-acataattcagtgtaattatatgtgttgatgtcgtgtcggtgt 16192741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 695 - 751
Target Start/End: Complemental strand, 1217930 - 1217877
Alignment:
Q  695 atcatataagtgcttatttgtataataaaagaaaaattgaagttaaattgttttcat 751  Q
    ||||||||||||||||||| ||||| |||||||||  ||||||||||||||||||||    
T  1217930 atcatataagtgcttattt-tataacaaaagaaaa--tgaagttaaattgttttcat 1217877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 551 - 600
Target Start/End: Original strand, 9624641 - 9624689
Alignment:
Q  551 gacaccgctaataatttgagaaaatacatataattcaatgtaattatatg 600  Q
    ||||| ||||||||||||||||||| || |||||||||||||||||||||    
T  9624641 gacactgctaataatttgagaaaat-cacataattcaatgtaattatatg 9624689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 622 - 671
Target Start/End: Original strand, 25074863 - 25074912
Alignment:
Q  622 gcgtgtccgacactgggacacgtctaattcaaggagtgttcgtgcttcat 671  Q
    |||||||||||||||||||||  ||||| | |||||||||||||||||||    
T  25074863 gcgtgtccgacactgggacacacctaatccgaggagtgttcgtgcttcat 25074912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 547 - 671
Target Start/End: Original strand, 34910313 - 34910434
Alignment:
Q  547 cgccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcgtatcggtgttgcgtgtccgacactgggacacgtct 646  Q
    |||||||||  |||||||||||| ||||| || |||||||| |||||||| | | ||| |||||||||||||||  ||     ||||| |||||||||||    
T  34910313 cgccgacacaactaataatttgaaaaaat-cacataattcagtgtaattacaagagtcggtgtcgtatcggtgt--cggacatgacaccgggacacgtct 34910409  T
Q  647 aattcaaggagtgttcgtgcttcat 671  Q
    ||| | |||||||| ||||||||||    
T  34910410 aatccgaggagtgtccgtgcttcat 34910434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 547 - 620
Target Start/End: Original strand, 37077354 - 37077426
Alignment:
Q  547 cgccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcgtatcggtgt 620  Q
    ||||||||||| |||||||||||||| ||| | ||||||||||| ||| |||||||||| |||| | |||||||    
T  37077354 cgccgacaccgataataatttgagaatata-acataattcaatggaatcatatgtgtcattgtcatgtcggtgt 37077426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 550 - 611
Target Start/End: Complemental strand, 40993396 - 40993335
Alignment:
Q  550 cgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcg 611  Q
    |||||||||||||||||| | ||||  || |||||||| |||||||||||||||| ||||||    
T  40993396 cgacaccgctaataatttaaaaaaaatcacataattcagtgtaattatatgtgtcggtgtcg 40993335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 547 - 671
Target Start/End: Complemental strand, 24205104 - 24204983
Alignment:
Q  547 cgccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcgtatcggtgttgcgtgtccgacactgggacacgtct 646  Q
    ||||||||| | |||||||||||||||||  | ||||| || |||||||||| ||||| |||||| | |  ||  |||||||||||||  ||||||| ||    
T  24205104 cgccgacacggataataatttgagaaaatg-acataatacagtgtaattataagtgtc-gtgtcgga-cactgacgcgtgtccgacaccaggacacgcct 24205008  T
Q  647 aattcaaggagtgttcgtgcttcat 671  Q
    ||||| |||||||| ||||||||||    
T  24205007 aattcgaggagtgtccgtgcttcat 24204983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 623 - 671
Target Start/End: Original strand, 28918072 - 28918120
Alignment:
Q  623 cgtgtccgacactgggacacgtctaattcaaggagtgttcgtgcttcat 671  Q
    ||||||||||||||||||||| ||||| |||||||||| | ||||||||    
T  28918072 cgtgtccgacactgggacacgcctaatccaaggagtgtccctgcttcat 28918120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 548 - 604
Target Start/End: Complemental strand, 32804602 - 32804547
Alignment:
Q  548 gccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtc 604  Q
    |||||||||| ||||||||||||||||| || |||||| | ||||||||||||||||    
T  32804602 gccgacaccgttaataatttgagaaaat-cacataatttagtgtaattatatgtgtc 32804547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 623 - 671
Target Start/End: Original strand, 40052381 - 40052429
Alignment:
Q  623 cgtgtccgacactgggacacgtctaattcaaggagtgttcgtgcttcat 671  Q
    |||||||||||| |||||||| ||||| | |||||||||||||||||||    
T  40052381 cgtgtccgacaccgggacacgcctaatccgaggagtgttcgtgcttcat 40052429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 547 - 598
Target Start/End: Complemental strand, 5407310 - 5407260
Alignment:
Q  547 cgccgacaccgctaataatttgagaaaatacatataattcaatgtaattata 598  Q
    ||||||||||||||| ||||||||||||| || |||||||| ||||||||||    
T  5407310 cgccgacaccgctaaaaatttgagaaaat-cacataattcattgtaattata 5407260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 547 - 618
Target Start/End: Original strand, 14832095 - 14832165
Alignment:
Q  547 cgccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcgtatcggt 618  Q
    |||||| || ||||||||||||| ||||| || |||| |||||||||||| | ||||||||||||| |||||    
T  14832095 cgccgatacagctaataatttgaaaaaat-cacataactcaatgtaattacaagtgtcagtgtcgtgtcggt 14832165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 549 - 604
Target Start/End: Original strand, 29508442 - 29508496
Alignment:
Q  549 ccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtc 604  Q
    |||| ||| |||||||||||| ||||| ||||||||||| ||||||||||||||||    
T  29508442 ccgataccactaataatttgaaaaaat-catataattcagtgtaattatatgtgtc 29508496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 559 - 610
Target Start/End: Complemental strand, 40150622 - 40150572
Alignment:
Q  559 taataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtc 610  Q
    |||||||||||||||||  ||||||||||||||||| ||||||||| |||||    
T  40150622 taataatttgagaaaatg-atataattcaatgtaatcatatgtgtcggtgtc 40150572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 547 - 621
Target Start/End: Original strand, 1550136 - 1550209
Alignment:
Q  547 cgccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcgtatcggtgtt 621  Q
    |||| |||||||||||||||||| ||||| || |  ||||| |||||||||| ||||||||||||| || |||||    
T  1550136 cgccaacaccgctaataatttgaaaaaat-cacactattcagtgtaattataggtgtcagtgtcgtgtcagtgtt 1550209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 549 - 611
Target Start/End: Complemental strand, 8789611 - 8789550
Alignment:
Q  549 ccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcg 611  Q
    ||||||| ||| ||||||||||||||| || |||||||  |||||||||||||||| ||||||    
T  8789611 ccgacacggcttataatttgagaaaat-cacataattccgtgtaattatatgtgtcggtgtcg 8789550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 547 - 601
Target Start/End: Original strand, 12704003 - 12704056
Alignment:
Q  547 cgccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgt 601  Q
    |||||||||| |||||||||||||||||  || |||||||| |||||||||||||    
T  12704003 cgccgacaccactaataatttgagaaaa-gcacataattcagtgtaattatatgt 12704056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 578 - 612
Target Start/End: Original strand, 26917296 - 26917330
Alignment:
Q  578 atataattcaatgtaattatatgtgtcagtgtcgt 612  Q
    |||||||||| ||||||||||||||||||||||||    
T  26917296 atataattcagtgtaattatatgtgtcagtgtcgt 26917330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 563 - 621
Target Start/End: Original strand, 39002044 - 39002101
Alignment:
Q  563 aatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcgtatcggtgtt 621  Q
    ||||||| ||||| || |||||||||||||||||||| |||||||||||| | ||||||    
T  39002044 aatttgaaaaaat-cacataattcaatgtaattatatatgtcagtgtcgtgttggtgtt 39002101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 709 - 771
Target Start/End: Complemental strand, 45433058 - 45432997
Alignment:
Q  709 tatttgtataataaaagaaaaattgaagttaaattgttttcatatttagctataagttgtttt 771  Q
    ||||| ||||| |||||| ||| ||||||||||||||||||||| | |||||||| |||||||    
T  45433058 tatttctataagaaaagataaaatgaagttaaattgttttcata-tgagctataaattgtttt 45432997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 552 - 617
Target Start/End: Original strand, 7948959 - 7949024
Alignment:
Q  552 acaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcgtatcgg 617  Q
    |||||| ||||| ||||||||||   | |||||||||||||||| |||||||||| ||||| ||||    
T  7948959 acaccgataatagtttgagaaaaatgacataattcaatgtaattgtatgtgtcagagtcgtgtcgg 7949024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 551 - 604
Target Start/End: Complemental strand, 10690321 - 10690269
Alignment:
Q  551 gacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtc 604  Q
    ||||||||||||||| ||||||||| || |||||||| ||||||||||| ||||    
T  10690321 gacaccgctaataatctgagaaaat-cacataattcagtgtaattatatttgtc 10690269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 547 - 620
Target Start/End: Original strand, 14209109 - 14209181
Alignment:
Q  547 cgccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcgtatcggtgt 620  Q
    |||||||||  |||||||||| | ||||| || |||||||| |||||||| | ||||||||||||| |||||||    
T  14209109 cgccgacacaactaataattttaaaaaat-cacataattcagtgtaattacaagtgtcagtgtcgtgtcggtgt 14209181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 552 - 609
Target Start/End: Complemental strand, 17005677 - 17005621
Alignment:
Q  552 acaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgt 609  Q
    ||||| |||||||||||| ||||| ||||||||||| |||||||||| ||||| ||||    
T  17005677 acaccactaataatttgataaaat-catataattcagtgtaattataagtgtcggtgt 17005621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 622 - 671
Target Start/End: Original strand, 21211362 - 21211411
Alignment:
Q  622 gcgtgtccgacactgggacacgtctaattcaaggagtgttcgtgcttcat 671  Q
    |||||||||||||||||||||  ||||| | ||||||||| |||||||||    
T  21211362 gcgtgtccgacactgggacactcctaatccgaggagtgtttgtgcttcat 21211411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 554 - 599
Target Start/End: Complemental strand, 21419511 - 21419467
Alignment:
Q  554 accgctaataatttgagaaaatacatataattcaatgtaattatat 599  Q
    |||| ||||||||| |||||||| ||||||||||||||||||||||    
T  21419511 accgttaataatttaagaaaata-atataattcaatgtaattatat 21419467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 547 - 612
Target Start/End: Original strand, 26290367 - 26290431
Alignment:
Q  547 cgccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcgt 612  Q
    ||||||||||  ||||||||||||||||| || ||| |||  | ||||||||||||||||||||||    
T  26290367 cgccgacaccattaataatttgagaaaat-cacatagttcggtttaattatatgtgtcagtgtcgt 26290431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 626 - 671
Target Start/End: Original strand, 29508522 - 29508567
Alignment:
Q  626 gtccgacactgggacacgtctaattcaaggagtgttcgtgcttcat 671  Q
    ||||||||| |||||||||||||| |||| ||||| ||||||||||    
T  29508522 gtccgacaccgggacacgtctaatccaagaagtgtccgtgcttcat 29508567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 551 - 604
Target Start/End: Complemental strand, 34307839 - 34307787
Alignment:
Q  551 gacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtc 604  Q
    ||||||||||||||||||||||||| || ||| |||| |||||||||| |||||    
T  34307839 gacaccgctaataatttgagaaaat-cacatatttcagtgtaattataagtgtc 34307787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 558 - 603
Target Start/End: Original strand, 37991516 - 37991560
Alignment:
Q  558 ctaataatttgagaaaatacatataattcaatgtaattatatgtgt 603  Q
    |||||||||||| ||||||  |||||||||||||||||||||||||    
T  37991516 ctaataatttga-aaaataattataattcaatgtaattatatgtgt 37991560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 548 - 617
Target Start/End: Complemental strand, 49651848 - 49651780
Alignment:
Q  548 gccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcgtatcgg 617  Q
    |||||||| ||||||||||||| ||||| || |||||||| |||||||| | ||||| ||||||| ||||    
T  49651848 gccgacacggctaataatttgaaaaaat-cacataattcactgtaattacaagtgtcggtgtcgtgtcgg 49651780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 45; Significance: 4e-16; HSPs: 44)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 547 - 611
Target Start/End: Original strand, 9629379 - 9629442
Alignment:
Q  547 cgccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcg 611  Q
    |||||||||||| |||||||||||||||| || ||||||||||||||||||||||||| ||||||    
T  9629379 cgccgacaccgccaataatttgagaaaat-cacataattcaatgtaattatatgtgtcggtgtcg 9629442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 547 - 611
Target Start/End: Original strand, 19040348 - 19040411
Alignment:
Q  547 cgccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcg 611  Q
    ||||||||||||||||||||||||||||| || |||||||| |||||||||||||||| ||||||    
T  19040348 cgccgacaccgctaataatttgagaaaat-cacataattcagtgtaattatatgtgtctgtgtcg 19040411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 549 - 611
Target Start/End: Original strand, 7377977 - 7378038
Alignment:
Q  549 ccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcg 611  Q
    ||||||||||||| ||||||||||||| || ||||||||||||||||||||||||| ||||||    
T  7377977 ccgacaccgctaaaaatttgagaaaat-cacataattcaatgtaattatatgtgtcggtgtcg 7378038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 547 - 611
Target Start/End: Complemental strand, 7265656 - 7265593
Alignment:
Q  547 cgccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcg 611  Q
    |||| |||||||||||||||||||||||| || |||||||| |||||||||||||||| ||||||    
T  7265656 cgccaacaccgctaataatttgagaaaat-cacataattcagtgtaattatatgtgtcggtgtcg 7265593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 547 - 611
Target Start/End: Complemental strand, 20371173 - 20371110
Alignment:
Q  547 cgccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcg 611  Q
    ||||||||||||||||||||||||||||| || |||| ||||||| |||||||||||| ||||||    
T  20371173 cgccgacaccgctaataatttgagaaaat-cacataactcaatgtgattatatgtgtcggtgtcg 20371110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 552 - 604
Target Start/End: Complemental strand, 30866202 - 30866151
Alignment:
Q  552 acaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtc 604  Q
    |||||||||||||||||||||||| || |||||||||||||||||||||||||    
T  30866202 acaccgctaataatttgagaaaat-cacataattcaatgtaattatatgtgtc 30866151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 548 - 611
Target Start/End: Complemental strand, 7996440 - 7996378
Alignment:
Q  548 gccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcg 611  Q
    |||||||| ||||||||||||||||||| ||||||||||| |||||||||||| ||| ||||||    
T  7996440 gccgacactgctaataatttgagaaaat-catataattcagtgtaattatatgcgtcggtgtcg 7996378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 548 - 611
Target Start/End: Original strand, 8022361 - 8022423
Alignment:
Q  548 gccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcg 611  Q
    |||||||| ||||||||||||||||||| ||||||||||| |||||||||||| ||| ||||||    
T  8022361 gccgacactgctaataatttgagaaaat-catataattcagtgtaattatatgcgtcggtgtcg 8022423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 554 - 612
Target Start/End: Original strand, 9617437 - 9617494
Alignment:
Q  554 accgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcgt 612  Q
    |||| ||||||||||||||||| || ||||||||||||||||||||||||| |||||||    
T  9617437 accggtaataatttgagaaaat-cacataattcaatgtaattatatgtgtcggtgtcgt 9617494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 551 - 612
Target Start/End: Complemental strand, 9025553 - 9025493
Alignment:
Q  551 gacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcgt 612  Q
    ||||| ||||||||||||||||||| || |||||||| |||||||||||||||| |||||||    
T  9025553 gacactgctaataatttgagaaaat-cacataattcagtgtaattatatgtgtcggtgtcgt 9025493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 547 - 612
Target Start/End: Original strand, 9027174 - 9027238
Alignment:
Q  547 cgccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcgt 612  Q
    ||||||||||||||||||||||||| ||| || |||||||  |||||||||||||||| |||||||    
T  9027174 cgccgacaccgctaataatttgagataat-cacataattccgtgtaattatatgtgtcggtgtcgt 9027238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 547 - 620
Target Start/End: Original strand, 26562685 - 26562757
Alignment:
Q  547 cgccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcgtatcggtgt 620  Q
    ||||||||| ||||| ||||||||||||| || |||||||| ||||||||||||||||  |||||| |||||||    
T  26562685 cgccgacactgctaaaaatttgagaaaat-cacataattcagtgtaattatatgtgtcgatgtcgtgtcggtgt 26562757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 547 - 611
Target Start/End: Complemental strand, 21924998 - 21924935
Alignment:
Q  547 cgccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcg 611  Q
    ||||||||| |||||||||||||||| || || |||||||| |||||||||||||||| ||||||    
T  21924998 cgccgacactgctaataatttgagaatat-caaataattcagtgtaattatatgtgtcggtgtcg 21924935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 547 - 611
Target Start/End: Complemental strand, 33001352 - 33001289
Alignment:
Q  547 cgccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcg 611  Q
    ||||||||| ||||||||||||| ||||| || |||||| |||||||||||||||||| ||||||    
T  33001352 cgccgacactgctaataatttgaaaaaat-cacataattaaatgtaattatatgtgtcggtgtcg 33001289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 562 - 617
Target Start/End: Original strand, 7112789 - 7112843
Alignment:
Q  562 taatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcgtatcgg 617  Q
    ||||||||||||||  | |||||| |||||||||||||||||||||||||||||||    
T  7112789 taatttgagaaaatgaa-ataattaaatgtaattatatgtgtcagtgtcgtatcgg 7112843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 562 - 617
Target Start/End: Complemental strand, 8781356 - 8781302
Alignment:
Q  562 taatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcgtatcgg 617  Q
    ||||||||||||||  | |||||| |||||||||||||||||||||||||||||||    
T  8781356 taatttgagaaaatgaa-ataattaaatgtaattatatgtgtcagtgtcgtatcgg 8781302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 551 - 621
Target Start/End: Complemental strand, 7723309 - 7723240
Alignment:
Q  551 gacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcgtatcggtgtt 621  Q
    ||||| ||||||||||||||||||| |||||||||||   ||||||||||| || ||||||| ||||||||    
T  7723309 gacactgctaataatttgagaaaat-catataattcagcataattatatgtatcggtgtcgtgtcggtgtt 7723240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 547 - 609
Target Start/End: Original strand, 9658875 - 9658936
Alignment:
Q  547 cgccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgt 609  Q
    ||||||||||||||||||||| ||||||| || |||||||| ||||||||||| |||| ||||    
T  9658875 cgccgacaccgctaataatttaagaaaat-cacataattcagtgtaattatatttgtcggtgt 9658936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 547 - 620
Target Start/End: Complemental strand, 10339189 - 10339116
Alignment:
Q  547 cgccgacaccgctaataatttgagaaaatacatataattcaatgt-aattatatgtgtcagtgtcgtatcggtgt 620  Q
    |||||||||||| | |||||||||||||| || |||||||| ||| ||||||||||||||||| ||| |||||||    
T  10339189 cgccgacaccgcgattaatttgagaaaat-cacataattcagtgttaattatatgtgtcagtgccgtgtcggtgt 10339116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 550 - 604
Target Start/End: Original strand, 13851735 - 13851788
Alignment:
Q  550 cgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtc 604  Q
    ||||||||||||||||||||||||||| |  ||||||| ||||||||||||||||    
T  13851735 cgacaccgctaataatttgagaaaata-acgtaattcagtgtaattatatgtgtc 13851788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 547 - 620
Target Start/End: Complemental strand, 8931665 - 8931593
Alignment:
Q  547 cgccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcgtatcggtgt 620  Q
    ||||||||| ||||| |||||||||||||| | |||||||| | ||||||||||||||  |||||| |||||||    
T  8931665 cgccgacacagctaaaaatttgagaaaata-acataattcagtataattatatgtgtcgatgtcgtgtcggtgt 8931593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 548 - 609
Target Start/End: Complemental strand, 13364767 - 13364707
Alignment:
Q  548 gccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgt 609  Q
    |||||||| ||| ||||||||||||||| ||||||||||| |||||| ||||||||| ||||    
T  13364767 gccgacactgcttataatttgagaaaat-catataattcagtgtaatcatatgtgtcggtgt 13364707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 547 - 620
Target Start/End: Original strand, 16766693 - 16766765
Alignment:
Q  547 cgccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcgtatcggtgt 620  Q
    ||||||||| ||||||||||||| ||||| || |||||||| |||||||| | ||||| ||||||| |||||||    
T  16766693 cgccgacacagctaataatttgaaaaaat-cacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgt 16766765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 625 - 670
Target Start/End: Complemental strand, 32978887 - 32978842
Alignment:
Q  625 tgtccgacactgggacacgtctaattcaaggagtgttcgtgcttca 670  Q
    |||||||||| |||||||||||||| |||||||||| |||||||||    
T  32978887 tgtccgacaccgggacacgtctaatccaaggagtgtccgtgcttca 32978842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 547 - 611
Target Start/End: Complemental strand, 5732573 - 5732510
Alignment:
Q  547 cgccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcg 611  Q
    ||||||||||| ||||||||||||||||| || ||| || | |||||||||||||||| ||||||    
T  5732573 cgccgacaccgttaataatttgagaaaat-cacatattttagtgtaattatatgtgtcggtgtcg 5732510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 547 - 611
Target Start/End: Original strand, 7027237 - 7027301
Alignment:
Q  547 cgccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcg 611  Q
    |||||||||| || ||||||||| ||||  || |||||||| |||||||||||||||| ||||||    
T  7027237 cgccgacacccctgataatttgaaaaaaatcacataattcagtgtaattatatgtgtcggtgtcg 7027301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 561 - 617
Target Start/End: Complemental strand, 9024225 - 9024170
Alignment:
Q  561 ataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcgtatcgg 617  Q
    |||||||||||||||  | ||||||||||||||| ||||||||||||||||| ||||    
T  9024225 ataatttgagaaaatg-acataattcaatgtaatcatatgtgtcagtgtcgtgtcgg 9024170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 623 - 671
Target Start/End: Original strand, 9027236 - 9027284
Alignment:
Q  623 cgtgtccgacactgggacacgtctaattcaaggagtgttcgtgcttcat 671  Q
    |||||||||||| |||||||| ||||| ||||||||||| |||||||||    
T  9027236 cgtgtccgacaccgggacacggctaatccaaggagtgtttgtgcttcat 9027284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 548 - 612
Target Start/End: Original strand, 10294104 - 10294167
Alignment:
Q  548 gccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcgt 612  Q
    ||||| |||||||||||||||||| ||| |  ||| ||||||||||||||||||||| |||||||    
T  10294104 gccgataccgctaataatttgagataat-cgcatatttcaatgtaattatatgtgtcggtgtcgt 10294167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 556 - 620
Target Start/End: Complemental strand, 34073401 - 34073338
Alignment:
Q  556 cgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcgtatcggtgt 620  Q
    |||||||||||||||||||| |  |||||||| |||||||||||| ||| ||||||| |||||||    
T  34073401 cgctaataatttgagaaaat-ctcataattcagtgtaattatatgggtcggtgtcgtgtcggtgt 34073338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 547 - 610
Target Start/End: Original strand, 7938112 - 7938174
Alignment:
Q  547 cgccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtc 610  Q
    ||||||||| ||||||||||||| ||||| ||||||||| | |||||||||| ||||| |||||    
T  7938112 cgccgacacagctaataatttgaaaaaat-catataatttagtgtaattataagtgtcggtgtc 7938174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 547 - 606
Target Start/End: Complemental strand, 17341727 - 17341669
Alignment:
Q  547 cgccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcag 606  Q
    ||||||||||| ||||||||||| ||||| || |||||||| |||||||||| |||||||    
T  17341727 cgccgacaccgttaataatttgataaaat-cacataattcagtgtaattataagtgtcag 17341669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 547 - 617
Target Start/End: Original strand, 12696320 - 12696389
Alignment:
Q  547 cgccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcgtatcgg 617  Q
    ||||||||| ||||||||||||| |||||  | |||||||| |||||||| | ||||||||||||| ||||    
T  12696320 cgccgacacagctaataatttgaaaaaatt-acataattcagtgtaattacaagtgtcagtgtcgtgtcgg 12696389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 547 - 612
Target Start/End: Complemental strand, 21395370 - 21395307
Alignment:
Q  547 cgccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcgt 612  Q
    |||| ||||||||||||||||||||||||||  |||||| | |||||||| | ||||| |||||||    
T  21395370 cgccaacaccgctaataatttgagaaaatac--ataatttagtgtaattacaagtgtcggtgtcgt 21395307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 547 - 612
Target Start/End: Original strand, 3398615 - 3398678
Alignment:
Q  547 cgccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcgt 612  Q
    ||||||||| ||||||||||||| ||||| ||||||||||| |||||||||| || || |||||||    
T  3398615 cgccgacacagctaataatttga-aaaat-catataattcagtgtaattataagtatcggtgtcgt 3398678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 622 - 671
Target Start/End: Original strand, 7625184 - 7625233
Alignment:
Q  622 gcgtgtccgacactgggacacgtctaattcaaggagtgttcgtgcttcat 671  Q
    ||||||||||||| || |||||  |||| |||||||||||||||||||||    
T  7625184 gcgtgtccgacaccggaacacgcttaatccaaggagtgttcgtgcttcat 7625233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 547 - 620
Target Start/End: Complemental strand, 9107433 - 9107361
Alignment:
Q  547 cgccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcgtatcggtgt 620  Q
    ||||||||| ||||||||||||| ||||| || | |||||| |||||||| | ||||| ||||||| |||||||    
T  9107433 cgccgacacagctaataatttgaaaaaat-cacaaaattcagtgtaattacaagtgtcggtgtcgtgtcggtgt 9107361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 547 - 604
Target Start/End: Original strand, 10842528 - 10842584
Alignment:
Q  547 cgccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtc 604  Q
    ||||||||||||||||||||||| ||||| || |||||| | |||||| |||||||||    
T  10842528 cgccgacaccgctaataatttgaaaaaat-cacataatttagtgtaatcatatgtgtc 10842584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 551 - 612
Target Start/End: Complemental strand, 10889033 - 10888973
Alignment:
Q  551 gacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcgt 612  Q
    ||||||||||||||||||| ||||| || |||||| | ||| ||||||||||| ||||||||    
T  10889033 gacaccgctaataatttgataaaat-cacataatttagtgtgattatatgtgttagtgtcgt 10888973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 623 - 668
Target Start/End: Original strand, 25096503 - 25096548
Alignment:
Q  623 cgtgtccgacactgggacacgtctaattcaaggagtgttcgtgctt 668  Q
    ||||||| ||||||||||||||||||||| |||| |||| ||||||    
T  25096503 cgtgtcccacactgggacacgtctaattcgaggaatgtttgtgctt 25096548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 547 - 620
Target Start/End: Original strand, 32313400 - 32313472
Alignment:
Q  547 cgccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcgtatcggtgt 620  Q
    ||||||||||  |||||| ||||||||||| | || |||||||| ||||||||||||  ||||||| |||||||    
T  32313400 cgccgacaccaataataagttgagaaaata-acatgattcaatgcaattatatgtgtgggtgtcgtgtcggtgt 32313472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 551 - 612
Target Start/End: Complemental strand, 32320728 - 32320668
Alignment:
Q  551 gacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcgt 612  Q
    ||||||| ||||||||||| ||||| || |||||||||||| ||||||||| || |||||||    
T  32320728 gacaccgttaataatttgataaaat-cacataattcaatgtcattatatgtatcggtgtcgt 32320668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 558 - 603
Target Start/End: Original strand, 33419180 - 33419224
Alignment:
Q  558 ctaataatttgagaaaatacatataattcaatgtaattatatgtgt 603  Q
    |||||||||||| |||||  ||||||||||||||||||||||||||    
T  33419180 ctaataatttga-aaaattgatataattcaatgtaattatatgtgt 33419224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 552 - 609
Target Start/End: Complemental strand, 33468440 - 33468384
Alignment:
Q  552 acaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgt 609  Q
    |||||||||||||||||| ||||||  | ||||||||||||||||||| |||| ||||    
T  33468440 acaccgctaataatttgaaaaaataact-taattcaatgtaattatatatgtctgtgt 33468384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 4e-16; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 551 - 611
Target Start/End: Complemental strand, 32630794 - 32630735
Alignment:
Q  551 gacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcg 611  Q
    ||||||| |||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  32630794 gacaccgataataatttgagaaaatt-atataattcaatgtaattatatgtgtcagtgtcg 32630735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 548 - 612
Target Start/End: Original strand, 3966500 - 3966563
Alignment:
Q  548 gccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcgt 612  Q
    |||||||||||||||||||||||||||| || | |||||| |||||||||||||||| |||||||    
T  3966500 gccgacaccgctaataatttgagaaaat-cacacaattcagtgtaattatatgtgtcggtgtcgt 3966563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 547 - 619
Target Start/End: Original strand, 6035479 - 6035549
Alignment:
Q  547 cgccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcgtatcggtg 619  Q
    |||||||||||||||||||||||| ||||| |||||||||| ||||||||||| |||| ||||||| ||||||    
T  6035479 cgccgacaccgctaataatttgag-aaata-atataattcagtgtaattatatttgtcggtgtcgtgtcggtg 6035549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 549 - 620
Target Start/End: Complemental strand, 32767004 - 32766934
Alignment:
Q  549 ccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcgtatcggtgt 620  Q
    ||||||||||||||||||||||||||| |  | ||||||||||||||||||||||  ||||||| |||||||    
T  32767004 ccgacaccgctaataatttgagaaaat-cgcacaattcaatgtaattatatgtgtttgtgtcgtgtcggtgt 32766934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 549 - 610
Target Start/End: Original strand, 12927652 - 12927712
Alignment:
Q  549 ccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtc 610  Q
    |||||| |||||||||||||||||||| ||||||||| | ||||||||||| ||||||||||    
T  12927652 ccgacatcgctaataatttgagaaaat-catataatttagtgtaattatatatgtcagtgtc 12927712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 548 - 620
Target Start/End: Original strand, 18592070 - 18592141
Alignment:
Q  548 gccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcgtatcggtgt 620  Q
    |||||||||||||||| ||| |||||||  | ||||||||||||||||||||||| | ||||||| |||||||    
T  18592070 gccgacaccgctaatattttaagaaaatt-acataattcaatgtaattatatgtgccggtgtcgtgtcggtgt 18592141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 557 - 609
Target Start/End: Complemental strand, 23012461 - 23012410
Alignment:
Q  557 gctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgt 609  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||||| ||||    
T  23012461 gctaataatttgagaaaat-catataatttaatgtaattatatgtgtcggtgt 23012410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 547 - 611
Target Start/End: Complemental strand, 28588737 - 28588674
Alignment:
Q  547 cgccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcg 611  Q
    ||||||||||| ||||||||||||||||| || |||||||| |||||||||| ||||| ||||||    
T  28588737 cgccgacaccggtaataatttgagaaaat-cacataattcagtgtaattataggtgtcggtgtcg 28588674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 552 - 671
Target Start/End: Complemental strand, 30502446 - 30502330
Alignment:
Q  552 acaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcgtatcggtgttgcgtgtccgacactgggacacgtctaattc 651  Q
    |||||||||||||||||||||||| ||  ||||||| |||||||||||||||| |||||| |     |   | ||||||||||||||||| | ||||| |    
T  30502446 acaccgctaataatttgagaaaat-cacttaattcagtgtaattatatgtgtcggtgtcgga--cacgacacatgtccgacactgggacatgcctaatcc 30502350  T
Q  652 aaggagtgttcgtgcttcat 671  Q
    ||||| ||||||||||||||    
T  30502349 aaggattgttcgtgcttcat 30502330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 552 - 671
Target Start/End: Complemental strand, 30542789 - 30542673
Alignment:
Q  552 acaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcgtatcggtgttgcgtgtccgacactgggacacgtctaattc 651  Q
    |||||||||||||||||||||||| ||  ||||||| |||||||||||||||| |||||| |     |   | ||||||||||||||||| | ||||| |    
T  30542789 acaccgctaataatttgagaaaat-cacttaattcagtgtaattatatgtgtcggtgtcgga--cacgacacatgtccgacactgggacatgcctaatcc 30542693  T
Q  652 aaggagtgttcgtgcttcat 671  Q
    ||||| ||||||||||||||    
T  30542692 aaggattgttcgtgcttcat 30542673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 558 - 620
Target Start/End: Complemental strand, 22423864 - 22423803
Alignment:
Q  558 ctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcgtatcggtgt 620  Q
    |||||||||||||||||| || |||||||||| ||||||||| |||| ||||||| |||||||    
T  22423864 ctaataatttgagaaaat-cacataattcaatataattatatatgtcggtgtcgtgtcggtgt 22423803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 551 - 612
Target Start/End: Complemental strand, 6471948 - 6471888
Alignment:
Q  551 gacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcgt 612  Q
    ||||| ||||||||||||||||||| || |||||||| |||||||||||||||  |||||||    
T  6471948 gacacggctaataatttgagaaaat-cacataattcagtgtaattatatgtgtgggtgtcgt 6471888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 547 - 604
Target Start/End: Original strand, 27144459 - 27144515
Alignment:
Q  547 cgccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtc 604  Q
    |||||||||||||||||||||||| |||| || |||||| | ||||||||||||||||    
T  27144459 cgccgacaccgctaataatttgaggaaat-cacataatttagtgtaattatatgtgtc 27144515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 547 - 671
Target Start/End: Original strand, 31084319 - 31084445
Alignment:
Q  547 cgccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcgtatcgg---tgttgcgtgtccgacactgggacacg 643  Q
    ||||||||| ||||||||||||| ||||| || ||||||||||||||||| | |||||  |||||| ||||    |   ||||||||||||||||||| |    
T  31084319 cgccgacacagctaataatttgaaaaaat-cacataattcaatgtaattacaagtgtcgatgtcgtgtcggacacgacacgtgtccgacactgggacatg 31084417  T
Q  644 tctaattcaaggagtgttcgtgcttcat 671  Q
     ||||| | |||||||| |||| |||||    
T  31084418 cctaatccgaggagtgtccgtggttcat 31084445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 547 - 604
Target Start/End: Original strand, 34879346 - 34879402
Alignment:
Q  547 cgccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtc 604  Q
    ||||| ||||||||| ||||||||||||| ||||||||||| |||||| |||||||||    
T  34879346 cgccggcaccgctaaaaatttgagaaaat-catataattcagtgtaataatatgtgtc 34879402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 551 - 620
Target Start/End: Original strand, 39698541 - 39698609
Alignment:
Q  551 gacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcgtatcggtgt 620  Q
    ||||| ||||||||||||| ||||| || |||||||| |||||||| | ||||||||||||| |||||||    
T  39698541 gacacagctaataatttgaaaaaat-cacataattcagtgtaattacaagtgtcagtgtcgtgtcggtgt 39698609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 548 - 612
Target Start/End: Original strand, 11685936 - 11685999
Alignment:
Q  548 gccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcgt 612  Q
    |||||||||||||||||||||||||| | |  |||||| | |||||||||||||||| |||||||    
T  11685936 gccgacaccgctaataatttgagaaagt-cgcataatttagtgtaattatatgtgtcggtgtcgt 11685999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 552 - 620
Target Start/End: Complemental strand, 12264887 - 12264820
Alignment:
Q  552 acaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcgtatcggtgt 620  Q
    ||||||||||| ||||||||||||  | || ||||| ||||||||||||||||| |||| |||||||||    
T  12264887 acaccgctaattatttgagaaaatt-acatgattcagtgtaattatatgtgtcaatgtcatatcggtgt 12264820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 552 - 612
Target Start/End: Original strand, 36838544 - 36838603
Alignment:
Q  552 acaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcgt 612  Q
    ||||||||||||||||||||||||  | |||||| | |||||||||||||||| |||||||    
T  36838544 acaccgctaataatttgagaaaat-tacataatttagtgtaattatatgtgtcggtgtcgt 36838603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 547 - 606
Target Start/End: Original strand, 9449465 - 9449523
Alignment:
Q  547 cgccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcag 606  Q
    ||||||||||  ||||||||||||||||| || |||||||||||||| ||| ||||||||    
T  9449465 cgccgacaccaataataatttgagaaaat-cacataattcaatgtaactatttgtgtcag 9449523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 548 - 611
Target Start/End: Complemental strand, 16203857 - 16203795
Alignment:
Q  548 gccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcg 611  Q
    |||||||| ||||||||||||||||||| |  |||||| | |||||||||||||||| ||||||    
T  16203857 gccgacactgctaataatttgagaaaat-ctcataatttagtgtaattatatgtgtcggtgtcg 16203795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 547 - 671
Target Start/End: Original strand, 35017033 - 35017160
Alignment:
Q  547 cgccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcgtatcggtgttg----cgtgtccgacactgggacac 642  Q
    |||||| ||| |||||||||||||||||| || |||||| | |||||||||||| |  |||||||| || || |||    ||||||| |||  |||||||    
T  35017033 cgccgaaaccactaataatttgagaaaat-cacataatttagtgtaattatatgggatagtgtcgtgtcagtattgggcacgtgtccaacatcgggacac 35017131  T
Q  643 gtctaattcaaggagtgttcgtgcttcat 671  Q
    | ||||| | |||||||| ||||||||||    
T  35017132 gcctaatccgaggagtgtccgtgcttcat 35017160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 529 - 596
Target Start/End: Original strand, 27932211 - 27932279
Alignment:
Q  529 gacatgacactgatacgcc--gccgacaccgctaataatttgagaaaatacatataattcaatgtaatta 596  Q
    |||| |||||||| |||||  ||||||||||||||||||||||||||||  | |||||||| ||||||||    
T  27932211 gacacgacactgacacgccacgccgacaccgctaataatttgagaaaat-tacataattcagtgtaatta 27932279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 550 - 612
Target Start/End: Original strand, 39205879 - 39205940
Alignment:
Q  550 cgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcgt 612  Q
    |||||| ||||||||||||||||||| |||||||||   |||||||||||||||  |||||||    
T  39205879 cgacactgctaataatttgagaaaat-catataattaggtgtaattatatgtgttggtgtcgt 39205940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 624 - 670
Target Start/End: Complemental strand, 39268587 - 39268541
Alignment:
Q  624 gtgtccgacactgggacacgtctaattcaaggagtgttcgtgcttca 670  Q
    |||||||||||||||||||| ||||| | |||||||| |||||||||    
T  39268587 gtgtccgacactgggacacgcctaatccgaggagtgtccgtgcttca 39268541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 563 - 617
Target Start/End: Complemental strand, 41558701 - 41558648
Alignment:
Q  563 aatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcgtatcgg 617  Q
    |||||||||||||  | ||||||||||||||||| ||||||||||||||| ||||    
T  41558701 aatttgagaaaatg-acataattcaatgtaattaaatgtgtcagtgtcgtgtcgg 41558648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 547 - 612
Target Start/End: Original strand, 2436918 - 2436982
Alignment:
Q  547 cgccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcgt 612  Q
    ||||||||||||||||||||||  ||||| || |||||||  ||| |||||||||||| |||||||    
T  2436918 cgccgacaccgctaataatttgcaaaaat-cacataattcgttgtgattatatgtgtcggtgtcgt 2436982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 715 - 772
Target Start/End: Complemental strand, 2933764 - 2933708
Alignment:
Q  715 tataataaaagaaaaattgaagttaaattgttttcatatttagctataagttgttttt 772  Q
    |||||||||||| ||| |||||||||| |||||||||| | || ||||||||||||||    
T  2933764 tataataaaagataaaatgaagttaaactgttttcata-taagttataagttgttttt 2933708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 550 - 603
Target Start/End: Complemental strand, 38749623 - 38749571
Alignment:
Q  550 cgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgt 603  Q
    |||||||| ||||||||||| |||||  | ||||||||||||||||||||||||    
T  38749623 cgacaccgataataatttgaaaaaatg-acataattcaatgtaattatatgtgt 38749571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 551 - 604
Target Start/End: Complemental strand, 41091316 - 41091264
Alignment:
Q  551 gacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtc 604  Q
    ||||| |||||| |||||||||||| || |||||||| ||||||||||||||||    
T  41091316 gacactgctaatgatttgagaaaat-cacataattcagtgtaattatatgtgtc 41091264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 695 - 751
Target Start/End: Complemental strand, 41957581 - 41957528
Alignment:
Q  695 atcatataagtgcttatttgtataataaaagaaaaattgaagttaaattgttttcat 751  Q
    |||| |||||||||||||| ||||| |||||||||  ||||||||||||||||||||    
T  41957581 atcacataagtgcttattt-tataacaaaagaaaa--tgaagttaaattgttttcat 41957528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 40; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 551 - 622
Target Start/End: Complemental strand, 44584 - 44514
Alignment:
Q  551 gacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcgtatcggtgttg 622  Q
    ||||||||||| ||||||||||||| || |||||||| |||||||||||||||| || |||| |||||||||    
T  44584 gacaccgctaaaaatttgagaaaat-cacataattcagtgtaattatatgtgtcggtatcgtgtcggtgttg 44514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 40; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 553 - 620
Target Start/End: Complemental strand, 68299 - 68233
Alignment:
Q  553 caccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcgtatcggtgt 620  Q
    ||||| ||||||||||||||||| ||||||||| | | |||||||| |||||||||||||||||||||    
T  68299 caccgttaataatttgagaaaat-catataatttagtataattataggtgtcagtgtcgtatcggtgt 68233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1528 (Bit Score: 38; Significance: 0.000000000006; HSPs: 1)
Name: scaffold1528
Description:

Target: scaffold1528; HSP #1
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 549 - 622
Target Start/End: Original strand, 1033 - 1105
Alignment:
Q  549 ccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcgtatcggtgttg 622  Q
    ||||||||||||||||||||| |||||  | |||||||| ||||| ||||||||||||||| || |||||||||    
T  1033 ccgacaccgctaataatttgaaaaaatt-acataattcagtgtaactatatgtgtcagtgtggtgtcggtgttg 1105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0376 (Bit Score: 38; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 551 - 620
Target Start/End: Original strand, 6312 - 6380
Alignment:
Q  551 gacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcgtatcggtgt 620  Q
    ||||| ||||||||||||| |||||    ||||||||||||||||||||||||| |||||||||||||||    
T  6312 gacactgctaataatttgacaaaattgc-ataattcaatgtaattatatgtgtcggtgtcgtatcggtgt 6380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 547 - 619
Target Start/End: Original strand, 20168 - 20239
Alignment:
Q  547 cgccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcgtatcggtg 619  Q
    ||||||||| ||||||||||||| ||||| || |||||||| |||||||| | ||||||||||||| ||||||    
T  20168 cgccgacacagctaataatttgaaaaaat-cacataattcagtgtaattacaagtgtcagtgtcgtgtcggtg 20239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 552 - 620
Target Start/End: Complemental strand, 263430 - 263363
Alignment:
Q  552 acaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcgtatcggtgt 620  Q
    |||| ||||||||||||||||||  || |||||||| |||||||||| ||||||||||||| |||||||    
T  263430 acactgctaataatttgagaaaac-cacataattcagtgtaattataagtgtcagtgtcgtgtcggtgt 263363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 36; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 549 - 612
Target Start/End: Complemental strand, 135373 - 135311
Alignment:
Q  549 ccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcgt 612  Q
    ||||||| ||||||||||||||||||| || |||||||  |||||||||||||||| |||||||    
T  135373 ccgacactgctaataatttgagaaaat-cacataattctgtgtaattatatgtgtcggtgtcgt 135311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 36; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 559 - 610
Target Start/End: Complemental strand, 240072 - 240022
Alignment:
Q  559 taataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtc 610  Q
    |||||||||||||||||| ||||||||||||||||| ||||||||| |||||    
T  240072 taataatttgagaaaata-atataattcaatgtaatcatatgtgtcggtgtc 240022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 547 - 609
Target Start/End: Original strand, 28846 - 28907
Alignment:
Q  547 cgccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgt 609  Q
    ||||||||||| ||||||||| ||||||| |  ||||||||||||||||||||||||| ||||    
T  28846 cgccgacaccgttaataatttaagaaaat-cgcataattcaatgtaattatatgtgtcggtgt 28907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 35; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 550 - 612
Target Start/End: Original strand, 99892 - 99953
Alignment:
Q  550 cgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcgt 612  Q
    |||||||| ||||||||| |||||||| | ||||||||||||||||||||||||  |||||||    
T  99892 cgacaccgataataattttagaaaata-acataattcaatgtaattatatgtgttggtgtcgt 99953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 559 - 604
Target Start/End: Original strand, 90851 - 90895
Alignment:
Q  559 taataatttgagaaaatacatataattcaatgtaattatatgtgtc 604  Q
    ||||||||||||||||| ||||||||||| ||||||||||| ||||    
T  90851 taataatttgagaaaat-catataattcagtgtaattatatatgtc 90895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 547 - 620
Target Start/End: Original strand, 53176 - 53248
Alignment:
Q  547 cgccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcgtatcggtgt 620  Q
    |||||| ||||| |||||||||||||||| || |||||||| |||||||||| ||||| ||| ||| |||||||    
T  53176 cgccgataccgccaataatttgagaaaat-cacataattcagtgtaattataagtgtcggtgccgtgtcggtgt 53248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 623 - 671
Target Start/End: Complemental strand, 8614 - 8566
Alignment:
Q  623 cgtgtccgacactgggacacgtctaattcaaggagtgttcgtgcttcat 671  Q
    ||||||||||||||| ||||| ||||||| |||||||| ||||||||||    
T  8614 cgtgtccgacactggtacacgcctaattcgaggagtgtccgtgcttcat 8566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0380 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0380
Description:

Target: scaffold0380; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 623 - 671
Target Start/End: Original strand, 8670 - 8718
Alignment:
Q  623 cgtgtccgacactgggacacgtctaattcaaggagtgttcgtgcttcat 671  Q
    ||||||||||||||||| ||| ||||| |||||||||| ||||||||||    
T  8670 cgtgtccgacactgggatacgcctaatccaaggagtgtccgtgcttcat 8718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 548 - 612
Target Start/End: Complemental strand, 9809 - 9746
Alignment:
Q  548 gccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcgt 612  Q
    |||||| || |||||||||||||||||| ||  ||||||| |||||||||||||||| |||||||    
T  9809 gccgacgccactaataatttgagaaaat-cacttaattcagtgtaattatatgtgtcggtgtcgt 9746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 547 - 607
Target Start/End: Original strand, 92803 - 92862
Alignment:
Q  547 cgccgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtcagt 607  Q
    |||||||||||||||||||||||||||||  | |||||||| |||||||| | ||||||||    
T  92803 cgccgacaccgctaataatttgagaaaat-tacataattcagtgtaattacaagtgtcagt 92862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 31; Significance: 0.00000009; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 550 - 604
Target Start/End: Original strand, 26392 - 26445
Alignment:
Q  550 cgacaccgctaataatttgagaaaatacatataattcaatgtaattatatgtgtc 604  Q
    ||||||| |||||||||||||||||| || ||||||||||||  |||||||||||    
T  26392 cgacaccactaataatttgagaaaat-cacataattcaatgtcgttatatgtgtc 26445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 31; Significance: 0.00000009; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 561 - 619
Target Start/End: Original strand, 56932 - 56989
Alignment:
Q  561 ataatttgagaaaatacatataattcaatgtaattatatgtgtcagtgtcgtatcggtg 619  Q
    |||||||||||||||  |||||||||| |||||| ||| ||||||||||||| ||||||    
T  56932 ataatttgagaaaatg-atataattcagtgtaatcataagtgtcagtgtcgtgtcggtg 56989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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