View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5159_high_3 (Length: 248)
Name: NF5159_high_3
Description: NF5159
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5159_high_3 |
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Alignment Details
Target: chr7 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 41105819 - 41106063
Alignment:
| Q |
1 |
atcttcttctacgcggtactgtgttcgtagagctagataagtactacgagtacgttctttattttaggcctaatttgctgtctgcatggctgtcacataa |
100 |
Q |
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| T |
41105819 |
atcttcttctacgcggtactgtgttcgtagagctagataagtactacgagtacgttctttattttaggcctaatttgctgtctgcatggctgtcacataa |
41105918 |
T |
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| Q |
101 |
tatatggcatcacattcttttaatggatggatttatatttagtttattagtgcttgacgcaagtaatcatacctttaacttgcaccaacattgactaatt |
200 |
Q |
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|||||||||| ||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| |
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| T |
41105919 |
tatatggcatgacattcttttaatggatagatttatatttagtttattagtggttgacgcaagtaatcataccattaacttgcaccaacattgactaatt |
41106018 |
T |
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| Q |
201 |
tcaacttaaattttcacaatcccataaagttgcatattcttcgac |
245 |
Q |
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| T |
41106019 |
tcaacttaaattttcacaatcccataaacttgcatgttcatcgac |
41106063 |
T |
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