View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5160_high_20 (Length: 222)
Name: NF5160_high_20
Description: NF5160
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5160_high_20 |
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Alignment Details
Target: chr3 (Bit Score: 184; Significance: 1e-100; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 184; E-Value: 1e-100
Query Start/End: Original strand, 18 - 205
Target Start/End: Complemental strand, 55306840 - 55306653
Alignment:
| Q |
18 |
atttaaatgcaaaagaaaagactaaacaataatatgatattgattctcaactacaagcattgttgatgtcatttgtaagacaaactattgtgaatactaa |
117 |
Q |
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| T |
55306840 |
atttaaatgcaaaagaaaagactaaacaataatatgatattgattctcaactacaagcattgttgatgtcatttgttagacaaactattgtgaatactaa |
55306741 |
T |
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| Q |
118 |
aaaggattaaatactaaaataggaggtattttaattaccttcaacttttaagtagttcattgcattcttttttgttagtttattgttc |
205 |
Q |
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| T |
55306740 |
aaaggattaaatactaaaataggaggtattttaattaccttcaacttttaagtagttcattgcattcttttttgttagtttattgttc |
55306653 |
T |
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