View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5161_low_11 (Length: 284)
Name: NF5161_low_11
Description: NF5161
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5161_low_11 |
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Alignment Details
Target: chr8 (Bit Score: 237; Significance: 1e-131; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 17 - 269
Target Start/End: Complemental strand, 26457520 - 26457268
Alignment:
| Q |
17 |
atgaaaacgaaaagggaagacattttaatgttaaagactagatttcagccggattttaataagtaagctgtaagcaactttattatagaactgtcacaat |
116 |
Q |
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| T |
26457520 |
atgaaaacgaaaagtgaagacattttaatgttaaagactagatttcagccggatttgaataagtaagctgtaagcaactttattatagaactgtcacaat |
26457421 |
T |
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| Q |
117 |
caaatcttacttaaaatctaaaaacccaatcattgactctacaatgttgaatcatataaccagtatcttcgaatggaccaaacagaaaacaacaaagttg |
216 |
Q |
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| T |
26457420 |
caaatcttacttaaaatctaaaaacccaatcattgactctacaatattgaatcatataaccagtatcttcgaatggaccaaacagaaaacaacaaagttg |
26457321 |
T |
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| Q |
217 |
cacacatgtcctacataattcaatcgtactatttttatgattaagtatatttt |
269 |
Q |
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| T |
26457320 |
cacacatgtgctacataattcaatcgtactatttttatgattaagtatatttt |
26457268 |
T |
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