View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5164-Insertion-2 (Length: 833)

Name: NF5164-Insertion-2
Description: NF5164
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5164-Insertion-2
NF5164-Insertion-2
[»] chr1 (4 HSPs)
chr1 (8-323)||(49712985-49713300)
chr1 (8-323)||(49655463-49655778)
chr1 (405-529)||(18655503-18655627)
chr1 (408-470)||(9850028-9850090)
[»] chr6 (9 HSPs)
chr6 (405-554)||(13562201-13562356)
chr6 (405-554)||(13561334-13561489)
chr6 (406-533)||(10673666-10673793)
chr6 (605-684)||(9928083-9928172)
chr6 (407-517)||(25439055-25439165)
chr6 (405-479)||(24318050-24318124)
chr6 (615-650)||(27439180-27439215)
chr6 (405-470)||(27108170-27108234)
chr6 (405-470)||(27149967-27150031)
[»] chr5 (12 HSPs)
chr5 (405-533)||(38603682-38603810)
chr5 (405-533)||(42962079-42962207)
chr5 (405-475)||(39050744-39050814)
chr5 (405-470)||(8358224-8358289)
chr5 (405-517)||(42963163-42963275)
chr5 (405-554)||(39051578-39051732)
chr5 (405-475)||(5163716-5163786)
chr5 (405-553)||(38602718-38602873)
chr5 (609-650)||(38473221-38473262)
chr5 (405-470)||(8359409-8359474)
chr5 (405-488)||(301416-301499)
chr5 (427-501)||(4904280-4904355)
[»] chr4 (10 HSPs)
chr4 (405-533)||(31204610-31204738)
chr4 (405-532)||(21569306-21569433)
chr4 (405-533)||(21570355-21570483)
chr4 (405-533)||(31205641-31205769)
chr4 (405-470)||(54823253-54823318)
chr4 (413-479)||(44219014-44219080)
chr4 (408-470)||(54822437-54822499)
chr4 (405-466)||(44217629-44217690)
chr4 (405-501)||(47573608-47573704)
chr4 (405-476)||(42698650-42698721)
[»] chr2 (7 HSPs)
chr2 (405-554)||(38593087-38593241)
chr2 (405-554)||(38596683-38596837)
chr2 (405-532)||(10330762-10330888)
chr2 (405-532)||(371900-372027)
chr2 (405-554)||(38593956-38594107)
chr2 (405-554)||(38597552-38597703)
chr2 (413-533)||(370831-370951)
[»] chr3 (10 HSPs)
chr3 (405-533)||(50002469-50002597)
chr3 (405-533)||(50003155-50003283)
chr3 (405-533)||(21248189-21248317)
chr3 (406-533)||(27225490-27225617)
chr3 (411-532)||(5409400-5409521)
chr3 (406-526)||(27226478-27226598)
chr3 (405-470)||(55387641-55387706)
chr3 (427-533)||(45730714-45730820)
chr3 (407-532)||(5384479-5384604)
chr3 (405-475)||(21247292-21247362)
[»] chr7 (13 HSPs)
chr7 (405-532)||(23153563-23153690)
chr7 (405-533)||(35044675-35044804)
chr7 (405-533)||(36584837-36584965)
chr7 (413-533)||(47536782-47536902)
chr7 (405-532)||(47535715-47535842)
chr7 (405-519)||(43704398-43704512)
chr7 (405-521)||(35045838-35045954)
chr7 (405-533)||(40321125-40321253)
chr7 (417-533)||(42520289-42520405)
chr7 (405-533)||(42521190-42521318)
chr7 (406-475)||(40322225-40322295)
chr7 (405-533)||(43703109-43703237)
chr7 (427-503)||(40881168-40881245)
[»] chr8 (8 HSPs)
chr8 (405-533)||(41767096-41767224)
chr8 (405-529)||(44770550-44770674)
chr8 (405-476)||(43415957-43416028)
chr8 (419-533)||(44769749-44769862)
chr8 (405-533)||(12820031-12820158)
chr8 (405-466)||(43414437-43414498)
chr8 (405-480)||(23768471-23768545)
chr8 (405-501)||(9189450-9189546)
[»] scaffold0013 (2 HSPs)
scaffold0013 (404-533)||(32157-32285)
scaffold0013 (404-533)||(27886-28016)
[»] scaffold0041 (1 HSPs)
scaffold0041 (427-503)||(85038-85115)
[»] scaffold0003 (1 HSPs)
scaffold0003 (615-650)||(48147-48182)


Alignment Details
Target: chr1 (Bit Score: 288; Significance: 1e-161; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 288; E-Value: 1e-161
Query Start/End: Original strand, 8 - 323
Target Start/End: Original strand, 49712985 - 49713300
Alignment:
Q  8 agagctgcaaaggaacacaattggttgctctgaagaaaacaaaacgagttcggttgtggcattgtatggtgatgataaaaatgcaagcttggtgtcaaag 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  49712985 agagctgcaaaggaacacaattggttgctctgaagaaaacaaaacgagttcggttgtggcattgtatggcgatgataaaaatgcaagcttggtgtcaaag 49713084  T
Q  108 aattgcagggatgaagtggtttatgcgatggtggaaaatggtgtgaaaggagggattgaagagtcactgagaaatgggtttaggttgaattggatagcta 207  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  49713085 aattgcagggatgaagtggtttatgcgatggtggaaaatgttgtgaaaggagggattgaagagtcactgagaaatggggttcggttgaattggatagcta 49713184  T
Q  208 gtgattgcaatgagtgtaacagcactggagggaggtgtggctttgataaagatgtatacagtttcaggtgttactgcactgatagagttcatcctgcaaa 307  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  49713185 gtgattgcaatgagtgtaacagcactggaggaaggtgtggctttgataaagatgtatacagtttcaggtgttactgcactgatagagttcattctgcaaa 49713284  T
Q  308 gtgtgatacaggtttg 323  Q
     |||||||||||||||    
T  49713285 atgtgatacaggtttg 49713300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 8 - 323
Target Start/End: Original strand, 49655463 - 49655778
Alignment:
Q  8 agagctgcaaaggaacacaattggttgctctgaagaaaacaaaacgagttcggttgtggcattgtatggtgatgataaaaatgcaagcttggtgtcaaag 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  49655463 agagctgcaaaggaacacaattggttgctctgaagaaaacaaaacgagttcggttgtggcattgtatgatgatgataaaaatgcaagcctggtgtcaaag 49655562  T
Q  108 aattgcagggatgaagtggtttatgcgatggtggaaaatggtgtgaaaggagggattgaagagtcactgagaaatgggtttaggttgaattggatagcta 207  Q
    |||||||||||||||||| || || ||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49655563 aattgcagggatgaagtgattaatacgagggtggaaaatgttgtgaaaggagggattgaagagtcactgagaaatgggtttaggttgaattggatagcta 49655662  T
Q  208 gtgattgcaatgagtgtaacagcactggagggaggtgtggctttgataaagatgtatacagtttcaggtgttactgcactgatagagttcatcctgcaaa 307  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| |||||||    
T  49655663 gtgattgcaatgagtgtaacagcactggaggaaggtgtggctttgataaagatgtatacaatttcaagtgttactgcactgatagagttcattctgcaaa 49655762  T
Q  308 gtgtgatacaggtttg 323  Q
     |||||||||||||||    
T  49655763 atgtgatacaggtttg 49655778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 405 - 529
Target Start/End: Original strand, 18655503 - 18655627
Alignment:
Q  405 ttaaacgttttaaaatggtcctttatctttcttttaatcatcaatttagtcatattttattaatttcaaacctctacgaaagaa-accgttggataaaag 503  Q
    |||||||||| |||||| |  ||||||||| ||||||| |||||||||||| | |||||||||||| |||   ||   |||||| |||||||||| ||||    
T  18655503 ttaaacgtttcaaaatgtttatttatctttgttttaatgatcaatttagtccttttttattaattttaaaatccttaaaaagaagaccgttggat-aaag 18655601  T
Q  504 gaggtccatcagatctaaaagtgtat 529  Q
    ||||||||| |||||||| |||||||    
T  18655602 gaggtccattagatctaatagtgtat 18655627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 408 - 470
Target Start/End: Original strand, 9850028 - 9850090
Alignment:
Q  408 aacgttttaaaatggtcctttatctttcttttaatcatcaatttagtcatattttattaattt 470  Q
    ||||||| ||||||||||||||| ||| ||||| ||||||||||  || ||||||||||||||    
T  9850028 aacgtttcaaaatggtcctttatatttgttttagtcatcaatttgatcctattttattaattt 9850090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 62; Significance: 2e-26; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 405 - 554
Target Start/End: Complemental strand, 13562356 - 13562201
Alignment:
Q  405 ttaaacgttttaaaatggtcctttatctttcttttaatcatcaatttagtcatattttattaatttcaaacctctacgaaagaa-accgttggataaaag 503  Q
    |||||||||| ||||||||||||||||||| ||||| |||| ||||| ||| |||||||||||||| ||||  |||  |||||| || ||||||| ||||    
T  13562356 ttaaacgtttcaaaatggtcctttatctttattttagtcataaatttggtcctattttattaattttaaactcctaaaaaagaagactgttggat-aaag 13562258  T
Q  504 gaggtccatcagatctaaaagtgtat------cacctaatttatatcactttcttca 554  Q
    ||| |||||||||||||| |||||||      |||||||||||||||||||||||||    
T  13562257 gagatccatcagatctaacagtgtatcaccaacacctaatttatatcactttcttca 13562201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 405 - 554
Target Start/End: Original strand, 13561334 - 13561489
Alignment:
Q  405 ttaaacgttttaaaatggtcctttatctttcttttaatcatcaatttagtcatattttattaatttcaaacctctacgaaagaa-accgttggataaaag 503  Q
    |||||||||| ||||||||| ||||||||| || || |||||||||| ||| |||||||||||||| ||||  ||   |||||| | |||||||| ||||    
T  13561334 ttaaacgtttcaaaatggtcttttatctttgttatagtcatcaatttggtcctattttattaattttaaactcctcaaaaagaagatcgttggat-aaag 13561432  T
Q  504 gaggtccatcagatctaaaagtgtat------cacctaatttatatcactttcttca 554  Q
     ||||||||||||||||| |||||||      |||||||||||||||||||||||||    
T  13561433 aaggtccatcagatctaatagtgtatcaccaacacctaatttatatcactttcttca 13561489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 406 - 533
Target Start/End: Original strand, 10673666 - 10673793
Alignment:
Q  406 taaacgttttaaaatggtcctttatctttcttttaatcatcaatttagtcatattttattaatttcaaacctctacgaaagaa-accgttggataaaagg 504  Q
    ||||||||| ||  ||||||||||| ||| ||||  |||||||||||||| |||||||||||||| |||||| |   |||||| ||||||| || |||||    
T  10673666 taaacgtttcaatttggtcctttatgtttgttttcgtcatcaatttagtcctattttattaattttaaacctttcaaaaagaagaccgttgaat-aaagg 10673764  T
Q  505 aggtccatcagatctaaaagtgtatcacc 533  Q
    |||||||||| ||||||| ||||||||||    
T  10673765 aggtccatcatatctaaaggtgtatcacc 10673793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 605 - 684
Target Start/End: Complemental strand, 9928172 - 9928083
Alignment:
Q  605 tctcatcactacacctccaatttcttaaatccagaaatcatcaaca----------tcaacatgatgatgatgatcatcaatttcttcat 684  Q
    |||| |||||||||||||||||||| |||| |||||||||||||||          |||||||||||||||| |||||||||||||||||    
T  9928172 tctcgtcactacacctccaatttctaaaattcagaaatcatcaacaacaatcaacatcaacatgatgatgatcatcatcaatttcttcat 9928083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 407 - 517
Target Start/End: Complemental strand, 25439165 - 25439055
Alignment:
Q  407 aaacgttttaaaatggtcctttatctttcttttaatcatcaatttagtcatattttattaatttcaaacctctacgaaagaa-accgttggataaaagga 505  Q
    |||||||| ||  ||||| ||||||||| |||| || |||||||| |||  ||||||||||||| ||||||||   |||||| |||||||||| ||||||    
T  25439165 aaacgtttcaatttggtcttttatctttgttttcattatcaatttggtccaattttattaattttaaacctcttaaaaagaagaccgttggat-aaagga 25439067  T
Q  506 ggtccatcagat 517  Q
    ||| ||||||||    
T  25439066 ggttcatcagat 25439055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 405 - 479
Target Start/End: Complemental strand, 24318124 - 24318050
Alignment:
Q  405 ttaaacgttttaaaatggtcctttatctttcttttaatcatcaatttagtcatattttattaatttcaaacctct 479  Q
    |||||| ||||||  ||||||||||||||| ||||  ||||||||||  ||  ||||||||||||||||||||||    
T  24318124 ttaaactttttaatttggtcctttatctttgttttcgtcatcaatttgatcccattttattaatttcaaacctct 24318050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 615 - 650
Target Start/End: Original strand, 27439180 - 27439215
Alignment:
Q  615 acacctccaatttcttaaatccagaaatcatcaaca 650  Q
    ||||||||||||||||||||||||||||| ||||||    
T  27439180 acacctccaatttcttaaatccagaaatcgtcaaca 27439215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 405 - 470
Target Start/End: Complemental strand, 27108234 - 27108170
Alignment:
Q  405 ttaaacgttttaaaatggtcctttatctttcttttaatcatcaatttagtcatattttattaattt 470  Q
    |||||||||||||  ||| |||| |||||| |||| |||||| |||||||| ||||||||||||||    
T  27108234 ttaaacgttttaatttggacctt-atctttgttttcatcatcgatttagtcctattttattaattt 27108170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 405 - 470
Target Start/End: Complemental strand, 27150031 - 27149967
Alignment:
Q  405 ttaaacgttttaaaatggtcctttatctttcttttaatcatcaatttagtcatattttattaattt 470  Q
    |||||||||||||  ||| |||| |||||| |||| |||||| |||||||| ||||||||||||||    
T  27150031 ttaaacgttttaatttggacctt-atctttgttttcatcatcgatttagtcctattttattaattt 27149967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 62; Significance: 2e-26; HSPs: 12)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 405 - 533
Target Start/End: Complemental strand, 38603810 - 38603682
Alignment:
Q  405 ttaaacgttttaaaatggtcctttatctttcttttaatcatcaatttagtcatattttattaatttcaaacctctacgaaagaa-accgttggataaaag 503  Q
    |||||| ||| ||||||||||||||||||| ||||| |||||||||| ||| |||||||||||||| ||||  |||  |||||| |||||||||| ||||    
T  38603810 ttaaacttttcaaaatggtcctttatctttgttttagtcatcaatttggtcctattttattaattttaaactcctaaaaaagaagaccgttggat-aaag 38603712  T
Q  504 gaggtccatcagatctaaaagtgtatcacc 533  Q
     ||||||||||||||||| |||||||||||    
T  38603711 aaggtccatcagatctaatagtgtatcacc 38603682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 405 - 533
Target Start/End: Original strand, 42962079 - 42962207
Alignment:
Q  405 ttaaacgttttaaaatggtcctttatctttcttttaatcatcaatttagtcatattttattaatttcaaacctctacgaaagaa-accgttggataaaag 503  Q
    ||||||| |||||| ||||||||||||||| |||| ||||||||||| ||| |||||||||||||| ||||||||   |||||| |||||||||| ||||    
T  42962079 ttaaacgctttaaattggtcctttatctttgttttcatcatcaatttggtcctattttattaattttaaacctctcaaaaagaagaccgttggat-aaag 42962177  T
Q  504 gaggtccatcagatctaaaagtgtatcacc 533  Q
    |||||| || ||||||||  ||||||||||    
T  42962178 gaggtctataagatctaatggtgtatcacc 42962207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 405 - 475
Target Start/End: Original strand, 39050744 - 39050814
Alignment:
Q  405 ttaaacgttttaaaatggtcctttatctttcttttaatcatcaatttagtcatattttattaatttcaaac 475  Q
    |||||||||| ||||||||||||||||||| ||||| |||| ||||| |||||||||||||||||| ||||    
T  39050744 ttaaacgtttcaaaatggtcctttatctttattttagtcataaatttggtcatattttattaattttaaac 39050814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 405 - 470
Target Start/End: Original strand, 8358224 - 8358289
Alignment:
Q  405 ttaaacgttttaaaatggtcctttatctttcttttaatcatcaatttagtcatattttattaattt 470  Q
    |||||||||||||||||||| ||||||||| ||||| |||||| ||| ||||||||||||||||||    
T  8358224 ttaaacgttttaaaatggtcttttatctttgttttagtcatcattttggtcatattttattaattt 8358289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 405 - 517
Target Start/End: Complemental strand, 42963275 - 42963163
Alignment:
Q  405 ttaaacgttttaaaatggtcctttatctttcttttaatcatcaatttagtcatattttattaatttcaaacctctacgaaaga-aaccgttggataaaag 503  Q
    |||||||||| ||  ||||| ||||||||| |||| |||||||||||| || |||||||||||||| ||||||||   |||||  |||||||||| ||||    
T  42963275 ttaaacgtttcaatttggtcatttatctttgttttcatcatcaatttaatcctattttattaattttaaacctctcaaaaagatgaccgttggat-aaag 42963177  T
Q  504 gaggtccatcagat 517  Q
    ||||||||||||||    
T  42963176 gaggtccatcagat 42963163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 405 - 554
Target Start/End: Complemental strand, 39051732 - 39051578
Alignment:
Q  405 ttaaacgttttaaaatggtcctttatctttcttttaatcatcaatttagtcatattttattaatttcaaacctctacgaaagaaaccgttggataaaagg 504  Q
    ||||| |||| ||||||||||||||||||| ||||| ||||||||||  || |||||||||||||| ||||  ||   ||| | |||| | ||| ||||     
T  39051732 ttaaatgtttcaaaatggtcctttatctttgttttagtcatcaatttgatcctattttattaattttaaactcctcaaaaaaagaccgctagat-aaaga 39051634  T
Q  505 aggtccatcagatctaaaagtgtat------cacctaatttatatcactttcttca 554  Q
    ||||||||||||||||| |||||||      |||||||||||||||| ||||||||    
T  39051633 aggtccatcagatctaatagtgtatcatcaacacctaatttatatcattttcttca 39051578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 405 - 475
Target Start/End: Original strand, 5163716 - 5163786
Alignment:
Q  405 ttaaacgttttaaaatggtcctttatctttcttttaatcatcaatttagtcatattttattaatttcaaac 475  Q
    ||||| |||| |||||| |||||||||||| ||||||| |||||||| |||||||||||||||||| ||||    
T  5163716 ttaaatgtttcaaaatgatcctttatctttgttttaattatcaatttggtcatattttattaattttaaac 5163786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 405 - 553
Target Start/End: Original strand, 38602718 - 38602873
Alignment:
Q  405 ttaaacgttttaaaatggtcctttatc-tttcttttaatcatcaatttagtcatattttattaatttcaaacctctacgaaagaa-accgttggataaaa 502  Q
    |||||||||||||||||||||| |||| ||| ||||| |||| ||||| |||||||||||||||||| ||||  ||   |||||| || |||||||||||    
T  38602718 ttaaacgttttaaaatggtcctctatcttttattttagtcataaatttggtcatattttattaattttaaactcctcaaaaagaagacagttggataaaa 38602817  T
Q  503 ggaggtccatcagatctaaaagtgtatcacc------taatttatatcactttcttc 553  Q
     ||  | |||||||||||| | |||||||||      ||||||||||||||||||||    
T  38602818 -gatattcatcagatctaacaatgtatcaccaacacttaatttatatcactttcttc 38602873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 609 - 650
Target Start/End: Complemental strand, 38473262 - 38473221
Alignment:
Q  609 atcactacacctccaatttcttaaatccagaaatcatcaaca 650  Q
    ||||||||||||||||||| ||||||||||||||||||||||    
T  38473262 atcactacacctccaattttttaaatccagaaatcatcaaca 38473221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 405 - 470
Target Start/End: Complemental strand, 8359474 - 8359409
Alignment:
Q  405 ttaaacgttttaaaatggtcctttatctttcttttaatcatcaatttagtcatattttattaattt 470  Q
    ||||| |||||||||||||| ||||||||| ||||| |||||| ||| ||| |||||||| |||||    
T  8359474 ttaaaagttttaaaatggtcttttatctttgttttagtcatcattttggtcctattttataaattt 8359409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 405 - 488
Target Start/End: Original strand, 301416 - 301499
Alignment:
Q  405 ttaaacgttttaaaatggtcctttatctttcttttaatcatcaatttagtcatattttattaatttcaaacctctacgaaagaa 488  Q
    ||||||||| ||||||| || ||| ||||| |||||  |||||||||  || |||||||||||||| ||||||||  |||||||    
T  301416 ttaaacgttataaaatgatcttttctctttgttttagccatcaatttgatcctattttattaattttaaacctcttagaaagaa 301499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 427 - 501
Target Start/End: Original strand, 4904280 - 4904355
Alignment:
Q  427 ttatctttcttttaatcatcaatttagtcatattttattaatttcaaacctctacgaaagaa-accgttggataaa 501  Q
    |||||||| |||| |||||| |||| |||||||||||||||||| |||  ||||  |||||| |||||||||||||    
T  4904280 ttatctttgttttcatcatcgatttggtcatattttattaattttaaatttctaaaaaagaagaccgttggataaa 4904355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 62; Significance: 2e-26; HSPs: 10)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 405 - 533
Target Start/End: Original strand, 31204610 - 31204738
Alignment:
Q  405 ttaaacgttttaaaatggtcctttatctttcttttaatcatcaatttagtcatattttattaatttcaaacctctacgaaagaa-accgttggataaaag 503  Q
    |||||||||| ||||||||| ||||||||| |||||||||||||||| ||| |||||||||||||| ||||  ||   |||||| |||||||||| ||||    
T  31204610 ttaaacgtttcaaaatggtcatttatctttattttaatcatcaatttggtcctattttattaattttaaactccttaaaaagaagaccgttggat-aaag 31204708  T
Q  504 gaggtccatcagatctaaaagtgtatcacc 533  Q
    || ||||||||||||||| |||||||||||    
T  31204709 gatgtccatcagatctaacagtgtatcacc 31204738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 405 - 532
Target Start/End: Original strand, 21569306 - 21569433
Alignment:
Q  405 ttaaacgttttaaaatggtcctttatctttcttttaatcatcaatttagtcatattttattaatttcaaacctctacgaaagaa-accgttggataaaag 503  Q
    |||||||||| ||  ||||| ||||||||| |||| |||||| ||||| ||||||||||||||||| ||||||||   |||||| |||||||||| ||||    
T  21569306 ttaaacgtttcaatttggtcatttatctttgttttcatcatctatttaatcatattttattaattttaaacctctcaaaaagaagaccgttggat-aaag 21569404  T
Q  504 gaggtccatcagatctaaaagtgtatcac 532  Q
    |||||||||||||||||| ||||||||||    
T  21569405 gaggtccatcagatctaacagtgtatcac 21569433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 405 - 533
Target Start/End: Complemental strand, 21570483 - 21570355
Alignment:
Q  405 ttaaacgttttaaaatggtcctttatctttcttttaatcatcaatttagtcatattttattaatttcaaacctctacgaaagaa-accgttggataaaag 503  Q
    |||||||||| ||  ||||| ||||||||| |||| |||||||||||  || |||||||||||||| ||||||||   |||||| |||||||||| ||||    
T  21570483 ttaaacgtttcaatttggtcatttatctttgttttcatcatcaatttgatcctattttattaattttaaacctctcaaaaagaagaccgttggat-aaag 21570385  T
Q  504 gaggtccatcagatctaaaagtgtatcacc 533  Q
    |||||| |||||||||||  ||||||||||    
T  21570384 gaggtctatcagatctaatcgtgtatcacc 21570355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 405 - 533
Target Start/End: Complemental strand, 31205769 - 31205641
Alignment:
Q  405 ttaaacgttttaaaatggtcctttatctttcttttaatcatcaatttagtcatattttattaatttcaaacctctacgaaagaa-accgttggataaaag 503  Q
    |||||||||| ||||||||||||||||||| ||||||| || ||||| |||||||||||||||||| ||||  ||   |||||| ||  |||||| ||||    
T  31205769 ttaaacgtttcaaaatggtcctttatctttgttttaattattaatttggtcatattttattaattttaaactccttaaaaagaagacatttggat-aaag 31205671  T
Q  504 gaggtccatcagatctaaaagtgtatcacc 533  Q
    ||| ||||||||||||||  ||||||||||    
T  31205670 gagatccatcagatctaacggtgtatcacc 31205641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 405 - 470
Target Start/End: Complemental strand, 54823318 - 54823253
Alignment:
Q  405 ttaaacgttttaaaatggtcctttatctttcttttaatcatcaatttagtcatattttattaattt 470  Q
    |||||||||||||||||||||||||||||| ||||| ||||||||||  |||||||||||||||||    
T  54823318 ttaaacgttttaaaatggtcctttatctttgttttagtcatcaatttgatcatattttattaattt 54823253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 413 - 479
Target Start/End: Complemental strand, 44219080 - 44219014
Alignment:
Q  413 tttaaaatggtcctttatctttcttttaatcatcaatttagtcatattttattaatttcaaacctct 479  Q
    |||||| ||||||||||||||| |||| ||||||||||| ||| ||||||||| |||| ||||||||    
T  44219080 tttaaattggtcctttatctttgtttttatcatcaatttggtcctattttattgattttaaacctct 44219014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 408 - 470
Target Start/End: Original strand, 54822437 - 54822499
Alignment:
Q  408 aacgttttaaaatggtcctttatctttcttttaatcatcaatttagtcatattttattaattt 470  Q
    ||||||| ||||||||||||||| ||| ||||| ||||||||||  || ||||||||||||||    
T  54822437 aacgtttcaaaatggtcctttatatttgttttagtcatcaatttgatcctattttattaattt 54822499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 405 - 466
Target Start/End: Original strand, 44217629 - 44217690
Alignment:
Q  405 ttaaacgttttaaaatggtcctttatctttcttttaatcatcaatttagtcatattttatta 466  Q
    |||||||||||||  ||||| ||||||||| |||| ||||||||||| ||| ||||||||||    
T  44217629 ttaaacgttttaatttggtcttttatctttgttttcatcatcaatttggtcctattttatta 44217690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 405 - 501
Target Start/End: Complemental strand, 47573704 - 47573608
Alignment:
Q  405 ttaaacgttttaaaatggtcctttatctttcttttaatcatcaatttagtcatattttattaatttcaaacctctacgaaagaa-accgttggataaa 501  Q
    |||||||||||||  |||||||| |||||| ||||  ||||| |||| |||||||||||||||||| ||| ||||   |||||| |||||||||||||    
T  47573704 ttaaacgttttaatttggtcctt-atctttgtttttgtcatcgatttggtcatattttattaattttaaatctctgaaaaagaagaccgttggataaa 47573608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 405 - 476
Target Start/End: Complemental strand, 42698721 - 42698650
Alignment:
Q  405 ttaaacgttttaaaatggtcctttatctttcttttaatcatcaatttagtcatattttattaatttcaaacc 476  Q
    |||||||||| ||  ||||| ||||||||| |||| |||||||||||||||  |||||||| |||| |||||    
T  42698721 ttaaacgtttcaatttggtcatttatctttgttttcatcatcaatttagtcccattttatttattttaaacc 42698650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 59; Significance: 1e-24; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 405 - 554
Target Start/End: Original strand, 38593087 - 38593241
Alignment:
Q  405 ttaaacgttttaaaatggtcctttatctttcttttaatcatcaatttagtcatattttattaatttcaaacctctacgaaagaa-accgttggataaaag 503  Q
    |||||||||| ||||||||||||| ||||| ||||| |||||||||| ||| |||||||||||||| ||||  ||   |||||| |||||||||||||      
T  38593087 ttaaacgtttcaaaatggtcctttgtctttgttttagtcatcaatttggtcctattttattaattttaaactcctcaaaaagaagaccgttggataaa-- 38593184  T
Q  504 gaggtccatcagatctaaaagtgtatcacc------taatttatatcactttcttca 554  Q
    ||| |||||||||||||| |||||||||||      |||||||||||||||||||||    
T  38593185 gagatccatcagatctaatagtgtatcaccaacacttaatttatatcactttcttca 38593241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 405 - 554
Target Start/End: Original strand, 38596683 - 38596837
Alignment:
Q  405 ttaaacgttttaaaatggtcctttatctttcttttaatcatcaatttagtcatattttattaatttcaaacctctacgaaagaa-accgttggataaaag 503  Q
    |||||||||| ||||||||||||| ||||| ||||| |||||||||| ||| |||||||||||||| ||||  ||   |||||| |||||||||||||      
T  38596683 ttaaacgtttcaaaatggtcctttgtctttgttttagtcatcaatttggtcctattttattaattttaaactcctcaaaaagaagaccgttggataaa-- 38596780  T
Q  504 gaggtccatcagatctaaaagtgtatcacc------taatttatatcactttcttca 554  Q
    ||| |||||||||||||| |||||||||||      |||||||||||||||||||||    
T  38596781 gagatccatcagatctaatagtgtatcaccaacacttaatttatatcactttcttca 38596837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 405 - 532
Target Start/End: Original strand, 10330762 - 10330888
Alignment:
Q  405 ttaaacgttttaaaatggtcctttatctttcttttaatcatcaatttagtcatattttattaatttcaaacctctacgaaagaa-accgttggataaaag 503  Q
    |||||||||| ||||||||| ||||||||| |||||  ||| ||||| ||| |||||||||||||| ||||| ||   |||||| ||  |||||||||      
T  10330762 ttaaacgtttcaaaatggtcatttatctttgttttagccattaatttggtcctattttattaattttaaaccccttaaaaagaagactattggataaa-- 10330859  T
Q  504 gaggtccatcagatctaaaagtgtatcac 532  Q
    |||||| ||||||||||| ||||||||||    
T  10330860 gaggtctatcagatctaacagtgtatcac 10330888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 405 - 532
Target Start/End: Complemental strand, 372027 - 371900
Alignment:
Q  405 ttaaacgttttaaaatggtcctttatctttcttttaatcatcaatttagtcatattttattaatttcaaacctctacgaaaga-aaccgttggataaaag 503  Q
    |||||||||| ||  || |||||||||||| |||| |||||||||||  || |||||||||||||| ||||||||   |||||  || ||||||| ||||    
T  372027 ttaaacgtttcaatttgatcctttatctttgttttcatcatcaatttgatcctattttattaattttaaacctctcaaaaagatgactgttggat-aaag 371929  T
Q  504 gaggtccatcagatctaaaagtgtatcac 532  Q
    ||||| ||||||||||||  |||||||||    
T  371928 gaggttcatcagatctaacggtgtatcac 371900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 405 - 554
Target Start/End: Complemental strand, 38594107 - 38593956
Alignment:
Q  405 ttaaacgttttaaaatggtcctttatctttcttttaatcatcaatttagtcatattttattaatttcaaacctctacgaaagaa-accgttggataaaag 503  Q
    |||||||||||||||||||| ||||||||| |||||  ||| ||||| ||| |||||||||||||| |||| | |   |||||| |  ||||||| ||||    
T  38594107 ttaaacgttttaaaatggtcatttatctttattttagacataaatttggtcctattttattaattttaaacttatcaaaaagaagattgttggat-aaag 38594009  T
Q  504 gaggtccatcagatctaaaagtgtat------cacctaatttatatcactttcttca 554  Q
    ||||||||||||||||    ||||||      |||||||||||||||||||||||||    
T  38594008 gaggtccatcagatct----gtgtatcaccaacacctaatttatatcactttcttca 38593956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 405 - 554
Target Start/End: Complemental strand, 38597703 - 38597552
Alignment:
Q  405 ttaaacgttttaaaatggtcctttatctttcttttaatcatcaatttagtcatattttattaatttcaaacctctacgaaagaa-accgttggataaaag 503  Q
    |||||||||||||||||||| ||||||||| |||||  ||| ||||| ||| |||||||||||||| |||| | |   |||||| |  ||||||| ||||    
T  38597703 ttaaacgttttaaaatggtcatttatctttattttagacataaatttggtcctattttattaattttaaacttatcaaaaagaagattgttggat-aaag 38597605  T
Q  504 gaggtccatcagatctaaaagtgtat------cacctaatttatatcactttcttca 554  Q
    ||||||||||||||||    ||||||      |||||||||||||||||||||||||    
T  38597604 gaggtccatcagatct----gtgtatcaccaacacctaatttatatcactttcttca 38597552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 413 - 533
Target Start/End: Original strand, 370831 - 370951
Alignment:
Q  413 tttaaaatggtcctttatctttcttttaatcatcaatttagtcatattttattaatttcaaacctctacgaaagaa-accgttggataaaaggaggtcca 511  Q
    |||||| ||||| ||||||||| |||| |||||||||||  || ||||||||| |||| |||||||||  ||| || |||||||||| ||| |||||| |    
T  370831 tttaaattggtcatttatctttgtttttatcatcaatttgatcctattttattgattttaaacctctaaaaaataagaccgttggat-aaatgaggtcta 370929  T
Q  512 tcagatctaaaagtgtatcacc 533  Q
    ||| ||||||  ||||||||||    
T  370930 tcaaatctaatggtgtatcacc 370951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 58; Significance: 6e-24; HSPs: 10)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 405 - 533
Target Start/End: Original strand, 50002469 - 50002597
Alignment:
Q  405 ttaaacgttttaaaatggtcctttatctttcttttaatcatcaatttagtcatattttattaatttcaaacctctacgaaagaa-accgttggataaaag 503  Q
    ||||||||||  |||||||||||||| ||| |||||||||||||||||||| |||||||||||||| ||||  || | |||||| | |||||||| ||||    
T  50002469 ttaaacgtttcgaaatggtcctttatgtttgttttaatcatcaatttagtcctattttattaattttaaactccttcaaaagaagatcgttggat-aaag 50002567  T
Q  504 gaggtccatcagatctaaaagtgtatcacc 533  Q
    ||| ||||||||||||||  ||||||||||    
T  50002568 gagatccatcagatctaacggtgtatcacc 50002597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 405 - 533
Target Start/End: Complemental strand, 50003283 - 50003155
Alignment:
Q  405 ttaaacgttttaaaatggtcctttatctttcttttaatcatcaatttagtcatattttattaatttcaaacctctacgaaagaa-accgttggataaaag 503  Q
    |||||||||| ||||||||||||||| ||| |||||||||||||||| ||| |||||||||||||| ||||  ||   ||| || |||||||||| ||||    
T  50003283 ttaaacgtttcaaaatggtcctttatgtttgttttaatcatcaatttggtcctattttattaattttaaactccttaaaaataagaccgttggat-aaag 50003185  T
Q  504 gaggtccatcagatctaaaagtgtatcacc 533  Q
    |||||| |||||||||||  ||||||||||    
T  50003184 gaggtcaatcagatctaacggtgtatcacc 50003155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 405 - 533
Target Start/End: Complemental strand, 21248317 - 21248189
Alignment:
Q  405 ttaaacgttttaaaatggtcctttatctttcttttaatcatcaatttagtcatattttattaatttcaaacctctacgaaagaa-accgttggataaaag 503  Q
    |||||||||| |||||||||| |||||||| ||||| |||| | ||| ||| |||||||||||||| ||||||||   |||||| || |||||||  |||    
T  21248317 ttaaacgtttcaaaatggtcccttatctttgttttagtcattattttggtcctattttattaattttaaacctcttaaaaagaagactgttggat-taag 21248219  T
Q  504 gaggtccatcagatctaaaagtgtatcacc 533  Q
    |||||||||| |||||||  ||||||||||    
T  21248218 gaggtccatcggatctaacggtgtatcacc 21248189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 406 - 533
Target Start/End: Original strand, 27225490 - 27225617
Alignment:
Q  406 taaacgttttaaaatggtcctttatctttcttttaatcatcaatttagtcatattttattaatttcaaacctctacgaaagaa-accgttggataaaagg 504  Q
    ||||||||| ||  |||| |||||| ||| ||||  |||||||||||||| |||||||||||||| |||||| |   |||||| |||||||||| ||||     
T  27225490 taaacgtttcaatttggttctttatgtttgttttcgtcatcaatttagtcctattttattaattttaaacctttcaaaaagaagaccgttggat-aaaga 27225588  T
Q  505 aggtccatcagatctaaaagtgtatcacc 533  Q
    | |||||||||||||||| ||||||||||    
T  27225589 aagtccatcagatctaaaggtgtatcacc 27225617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 411 - 532
Target Start/End: Original strand, 5409400 - 5409521
Alignment:
Q  411 gttttaaaatggtcctttatctttcttttaatcatcaatttagtcatattttattaatttcaaacctctacgaaagaa-accgttggataaaaggaggtc 509  Q
    |||||||  ||||||||||||||| |||| |||||||||||  ||  ||||||||||||| ||||||||   |||||| |||||||||| |||||||||     
T  5409400 gttttaatttggtcctttatctttgttttcatcatcaatttgatccaattttattaattttaaacctcttaaaaagaagaccgttggat-aaaggaggtt 5409498  T
Q  510 catcagatctaaaagtgtatcac 532  Q
    |||||||| |||  |||||||||    
T  5409499 catcagatttaacggtgtatcac 5409521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 406 - 526
Target Start/End: Complemental strand, 27226598 - 27226478
Alignment:
Q  406 taaacgttttaaaatggtcctttatctttcttttaatcatcaatttagtcatattttattaatttcaaacctctacgaaagaa-accgttggataaaagg 504  Q
    ||||||||| ||  ||||||||||| ||| |||| ||||||||||| ||| |||||||||||||| ||||| ||   |||||| | |||||||| |||||    
T  27226598 taaacgtttcaatttggtcctttatgtttgttttcatcatcaatttggtcctattttattaattttaaacccctcaaaaagaagatcgttggat-aaagg 27226500  T
Q  505 aggtccatcagatctaaaagtg 526  Q
    |||||||| |||||||| ||||    
T  27226499 aggtccataagatctaacagtg 27226478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 405 - 470
Target Start/End: Complemental strand, 55387706 - 55387641
Alignment:
Q  405 ttaaacgttttaaaatggtcctttatctttcttttaatcatcaatttagtcatattttattaattt 470  Q
    ||||||||||||| ||| || ||||||||| |||||||||||||||| ||||||||||||| ||||    
T  55387706 ttaaacgttttaagatgatcttttatctttgttttaatcatcaatttggtcatattttattgattt 55387641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 427 - 533
Target Start/End: Original strand, 45730714 - 45730820
Alignment:
Q  427 ttatctttcttttaatcatcaatttagtcatattttattaatttcaaacctctacgaaagaa-accgttggataaaaggaggtccatcagatctaaaagt 525  Q
    |||||||| |||| |||||| |||||||| |||||||||||||| ||| |  ||  |||||| |||||||||| |||||| || ||||| ||||||  ||    
T  45730714 ttatctttgttttcatcatcgatttagtcctattttattaatttgaaatccataaaaaagaagaccgttggat-aaaggaagttcatcatatctaaccgt 45730812  T
Q  526 gtatcacc 533  Q
    ||||||||    
T  45730813 gtatcacc 45730820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 407 - 532
Target Start/End: Original strand, 5384479 - 5384604
Alignment:
Q  407 aaacgttttaaaatggtcctttatctttcttttaatcatcaatttagtcatattttattaatttcaaacctctacgaaagaa-accgttggataaaagga 505  Q
    |||||||| ||  ||||||| ||||||| |||| | ||||||||| |||  ||||||||||||| ||||||||   |||||| ||||| |||| ||| ||    
T  5384479 aaacgtttcaatttggtcctctatctttgttttcaacatcaatttggtccaattttattaattttaaacctcttaaaaagaagaccgtgggat-aaatga 5384577  T
Q  506 ggtccatcagatctaaaagtgtatcac 532  Q
    ||| |||||||| |||  |||||||||    
T  5384578 ggttcatcagatttaacggtgtatcac 5384604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 405 - 475
Target Start/End: Original strand, 21247292 - 21247362
Alignment:
Q  405 ttaaacgttttaaaatggtcctttatctttcttttaatcatcaatttagtcatattttattaatttcaaac 475  Q
    |||||||||| |||||||||| |||||||| ||||| |||| | ||| ||  |||||||||||||| ||||    
T  21247292 ttaaacgtttcaaaatggtcccttatctttgttttagtcataattttggttctattttattaattttaaac 21247362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 57; Significance: 2e-23; HSPs: 13)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 405 - 532
Target Start/End: Complemental strand, 23153690 - 23153563
Alignment:
Q  405 ttaaacgttttaaaatggtcctttatctttcttttaatcatcaatttagtcatattttattaatttcaaacctctacgaaagaa-accgttggataaaag 503  Q
    |||||||||| ||  ||||| ||||||||| |||| |||||||||||| ||||||||||||||||| ||||||||   |||||| || ||||||| ||||    
T  23153690 ttaaacgtttcaatttggtcatttatctttgtttttatcatcaatttaatcatattttattaattttaaacctctcaaaaagaagactgttggat-aaag 23153592  T
Q  504 gaggtccatcagatctaaaagtgtatcac 532  Q
    ||||||||||||||||||  |||||||||    
T  23153591 gaggtccatcagatctaacggtgtatcac 23153563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 405 - 533
Target Start/End: Original strand, 35044675 - 35044804
Alignment:
Q  405 ttaaacgttttaaaatggtcctttatctttcttttaatcatcaatttagtca-tattttattaatttcaaacctctacgaaagaa-accgttggataaaa 502  Q
    |||||||||| |||||| |||||||||||| |||||||||||||||| |||| | |||||||||||| |||   ||   |||||| |||||||||| |||    
T  35044675 ttaaacgtttcaaaatgatcctttatctttgttttaatcatcaatttggtcatttttttattaattttaaaatccttaaaaagaagaccgttggat-aaa 35044773  T
Q  503 ggaggtccatcagatctaaaagtgtatcacc 533  Q
    |||||||||| |||||||| |||||||||||    
T  35044774 ggaggtccattagatctaagagtgtatcacc 35044804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 405 - 533
Target Start/End: Complemental strand, 36584965 - 36584837
Alignment:
Q  405 ttaaacgttttaaaatggtcctttatctttcttttaatcatcaatttagtcatattttattaatttcaaacctctacgaaagaa-accgttggataaaag 503  Q
    |||||| ||| ||||||||||||||||||| ||||| |||||||||| |||||||||||||||||| ||| | ||   || ||| |||||||||| ||||    
T  36584965 ttaaacatttcaaaatggtcctttatctttattttagtcatcaatttggtcatattttattaattttaaagcccttaaaacgaagaccgttggat-aaag 36584867  T
Q  504 gaggtccatcagatctaaaagtgtatcacc 533  Q
    ||||||||| | |||||| |||| ||||||    
T  36584866 gaggtccattatatctaagagtggatcacc 36584837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 413 - 533
Target Start/End: Complemental strand, 47536902 - 47536782
Alignment:
Q  413 tttaaaatggtcctttatctttcttttaatcatcaatttagtcatattttattaatttcaaacctctacgaaagaa-accgttggataaaaggaggtcca 511  Q
    |||||| ||||||||||||||| |||| ||||||||||| ||| ||||||||| |||| |||| |||   |||||| |||||||||||||| |||||| |    
T  47536902 tttaaattggtcctttatctttgtttttatcatcaatttggtcctattttattgattttaaacttctcaaaaagaagaccgttggataaaa-gaggtcta 47536804  T
Q  512 tcagatctaaaagtgtatcacc 533  Q
    ||||||||||  ||||||||||    
T  47536803 tcagatctaatggtgtatcacc 47536782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 405 - 532
Target Start/End: Original strand, 47535715 - 47535842
Alignment:
Q  405 ttaaacgttttaaaatggtcctttatctttcttttaatcatcaatttagtcatattttattaatttcaaacctctacgaaaga-aaccgttggataaaag 503  Q
    |||||||||| ||  ||||||||||||||| |||| ||||||||||| ||| |||||||||||||| ||||||||   |||||  || ||||||| ||||    
T  47535715 ttaaacgtttcaatttggtcctttatctttgtttttatcatcaatttggtcctattttattaattttaaacctctcaaaaagatgactgttggat-aaag 47535813  T
Q  504 gaggtccatcagatctaaaagtgtatcac 532  Q
    ||| ||||||||||||||  |||||||||    
T  47535814 gagatccatcagatctaacggtgtatcac 47535842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 405 - 519
Target Start/End: Complemental strand, 43704512 - 43704398
Alignment:
Q  405 ttaaacgttttaaaatggtcctttatctttcttttaatcatcaatttagtcatattttattaatttcaaacctctacgaaagaa-accgttggataaaag 503  Q
    |||||||||| ||||||||||||||||||| ||||| |||||| |||| || |||||||||||||| ||||| ||   |||||| |||||||||| ||||    
T  43704512 ttaaacgtttcaaaatggtcctttatctttgttttagtcatcattttaatcctattttattaattttaaaccccttaaaaagaagaccgttggat-aaag 43704414  T
Q  504 gaggtccatcagatct 519  Q
    ||| |||||| |||||    
T  43704413 gagatccatcggatct 43704398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 405 - 521
Target Start/End: Complemental strand, 35045954 - 35045838
Alignment:
Q  405 ttaaacgttttaaaatggtcctttatctttcttttaatcatcaatttagtcatattttattaatttcaaacctctacgaaagaa-accgttggataaaag 503  Q
    |||||||||| ||||||||| ||||||||| ||||||||||||||||  || |||||||||||||| ||||  ||   |||||| |||||||||| ||||    
T  35045954 ttaaacgtttcaaaatggtcatttatctttgttttaatcatcaatttgatcctattttattaattttaaactccttaaaaagaataccgttggat-aaag 35045856  T
Q  504 gaggtccatcagatctaa 521  Q
    ||| |||||| |||||||    
T  35045855 gagatccatcggatctaa 35045838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 405 - 533
Target Start/End: Original strand, 40321125 - 40321253
Alignment:
Q  405 ttaaacgttttaaaatggtcctttatctttcttttaatcatcaatttagtcatattttattaatttcaaacctctacgaaagaa-accgttggataaaag 503  Q
    |||||||||| |||||| |||||||||||| |||||||||||||||| | | | |||||||||||| |||    |   |||||| |||||||||| ||||    
T  40321125 ttaaacgtttcaaaatgatcctttatctttgttttaatcatcaatttgggccttttttattaattttaaaatcattaaaaagaagaccgttggat-aaag 40321223  T
Q  504 gaggtccatcagatctaaaagtgtatcacc 533  Q
    ||||||||| |||||||| |||||||||||    
T  40321224 gaggtccattagatctaacagtgtatcacc 40321253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 417 - 533
Target Start/End: Original strand, 42520289 - 42520405
Alignment:
Q  417 aaatggtcctttatctttcttttaatcatcaatttagtcatattttattaatttcaaacctctacgaaag-aaaccgttggataaaaggaggtccatcag 515  Q
    |||||||||| ||||||| ||||| |||||||||| |||||||||||| ||||| |||||  |   |||| | |||||||||| |||||||||| |||||    
T  42520289 aaatggtcctgtatctttgttttagtcatcaattttgtcatattttatcaattttaaacccattaaaaagtagaccgttggat-aaaggaggtctatcag 42520387  T
Q  516 atctaaaagtgtatcacc 533  Q
    ||||||  ||||||||||    
T  42520388 atctaacggtgtatcacc 42520405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 405 - 533
Target Start/End: Complemental strand, 42521318 - 42521190
Alignment:
Q  405 ttaaacgttttaaaatggtcctttatctttcttttaatcatcaatttagtcatattttattaatttcaaacctctacgaaagaa-accgttggataaaag 503  Q
    |||||||||| ||||||||||| || |||| ||||| |||||||||| ||| |||||||| ||||| |||   ||   ||| || |||||||||| ||||    
T  42521318 ttaaacgtttcaaaatggtcctctacctttgttttagtcatcaatttggtcctattttatcaattttaaaatccttaaaaataagaccgttggat-aaag 42521220  T
Q  504 gaggtccatcagatctaaaagtgtatcacc 533  Q
    |||||||||| ||||||| |||||||||||    
T  42521219 gaggtccatcggatctaacagtgtatcacc 42521190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 406 - 475
Target Start/End: Complemental strand, 40322295 - 40322225
Alignment:
Q  406 taaacgtttt-aaaatggtcctttatctttcttttaatcatcaatttagtcatattttattaatttcaaac 475  Q
    |||||||||| ||||||||| ||||||||| ||||||||||||||||  || |||||||||||||| ||||    
T  40322295 taaacgttttcaaaatggtcttttatctttgttttaatcatcaatttgatcctattttattaattttaaac 40322225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 405 - 533
Target Start/End: Original strand, 43703109 - 43703237
Alignment:
Q  405 ttaaacgttttaaaatggtcctttatctttcttttaatcatcaatttagtcatattttattaatttcaaacctctacgaaagaa-accgttggataaaag 503  Q
    ||||| |||||||||||||| ||||||| |  ||| ||||||||||| ||  |||||||||||||| |||  |||   |||||| |||||||||| ||||    
T  43703109 ttaaatgttttaaaatggtcttttatctatgctttcatcatcaatttggtactattttattaattttaaatttcttaaaaagaagaccgttggat-aaag 43703207  T
Q  504 gaggtccatcagatctaaaagtgtatcacc 533  Q
    ||||| |||| |||||||  ||||||||||    
T  43703208 gaggtgcatcggatctaacggtgtatcacc 43703237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 427 - 503
Target Start/End: Original strand, 40881168 - 40881245
Alignment:
Q  427 ttatctttcttttaatcatcaatttagtcatattttattaatttcaaacctctacgaaagaa-accgttggataaaag 503  Q
    |||||||| ||||  |||||||||| |||||||||||||||||| ||| | |||  |||||| |||||||||||||||    
T  40881168 ttatctttatttttgtcatcaatttggtcatattttattaattttaaatccctaaaaaagaagaccgttggataaaag 40881245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 8e-17; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 405 - 533
Target Start/End: Complemental strand, 41767224 - 41767096
Alignment:
Q  405 ttaaacgttttaaaatggtcctttatctttcttttaatcatcaatttagtcatattttattaatttcaaacctctacgaaagaa-accgttggataaaag 503  Q
    |||||||||| |||||||||| |||||||| ||||| |||| | ||| ||| |||||||||||||| ||||||||   |||||| || |||||||  |||    
T  41767224 ttaaacgtttcaaaatggtcccttatctttattttagtcattattttggtcctattttattaattttaaacctcttaaaaagaagactgttggat-taag 41767126  T
Q  504 gaggtccatcagatctaaaagtgtatcacc 533  Q
    |||||||||| |||||||  ||||||||||    
T  41767125 gaggtccatcggatctaacggtgtatcacc 41767096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 405 - 529
Target Start/End: Complemental strand, 44770674 - 44770550
Alignment:
Q  405 ttaaacgttttaaaatggtcctttatctttcttttaatcatcaatttagtcatattttattaatttcaaacctctacgaaagaa-accgttggataaaag 503  Q
    ||||| ||||||||||||||||||| |||| ||||| ||||||||||  || |||||||||||||| ||||| ||   |||||| |||||||||| |||     
T  44770674 ttaaatgttttaaaatggtcctttagctttgttttagtcatcaatttgatcctattttattaattttaaaccccttaaaaagaagaccgttggat-aaat 44770576  T
Q  504 gaggtccatcagatctaaaagtgtat 529  Q
    |||||| ||| ||||||| |||||||    
T  44770575 gaggtctatcggatctaacagtgtat 44770550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 405 - 476
Target Start/End: Complemental strand, 43416028 - 43415957
Alignment:
Q  405 ttaaacgttttaaaatggtcctttatctttcttttaatcatcaatttagtcatattttattaatttcaaacc 476  Q
    |||||||||| ||||||||| ||||||||| ||||| |||||| |||||||  ||||||||||||| |||||    
T  43416028 ttaaacgtttcaaaatggtcttttatctttgttttagtcatcattttagtccgattttattaattttaaacc 43415957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 419 - 533
Target Start/End: Original strand, 44769749 - 44769862
Alignment:
Q  419 atggtcctttatctttcttttaatcatcaatttagtcatattttattaatttcaaacctctacgaaagaa-accgttggataaaaggaggtccatcagat 517  Q
    |||||| ||||||||| ||||| ||||||||||  ||||||||||||||||| ||| | ||   || ||| || |||||||  |||||||||||||| ||    
T  44769749 atggtcatttatctttgttttagtcatcaatttgatcatattttattaattttaaaacccttaaaatgaagactgttggat--aaggaggtccatcatat 44769846  T
Q  518 ctaaaagtgtatcacc 533  Q
    |||| |||||||||||    
T  44769847 ctaacagtgtatcacc 44769862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 405 - 533
Target Start/End: Complemental strand, 12820158 - 12820031
Alignment:
Q  405 ttaaacgttttaaaatggtcctttatctttcttttaatcatcaatttagtcatattttattaatttcaaacctctacgaaagaa-accgttggataaaag 503  Q
    |||||||||||||  |||||||| |||||| ||||  || || |||| ||| |||||||||||||| ||| ||||   |||||| |||||||||| ||||    
T  12820158 ttaaacgttttaatttggtcctt-atctttgttttcgtcgtcgatttggtcctattttattaattttaaatctctcaaaaagaagaccgttggat-aaag 12820061  T
Q  504 gaggtccatcagatctaaaagtgtatcacc 533  Q
    ||||| ||||| ||||||  ||||||||||    
T  12820060 gaggttcatcatatctaactgtgtatcacc 12820031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 405 - 466
Target Start/End: Original strand, 43414437 - 43414498
Alignment:
Q  405 ttaaacgttttaaaatggtcctttatctttcttttaatcatcaatttagtcatattttatta 466  Q
    |||||||||| ||||||||||||||||| | |||| ||||||||||| ||  ||||||||||    
T  43414437 ttaaacgtttcaaaatggtcctttatctatgttttcatcatcaatttggtactattttatta 43414498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 405 - 480
Target Start/End: Complemental strand, 23768545 - 23768471
Alignment:
Q  405 ttaaacgttttaaaatggtcctttatctttcttttaatcatcaatttagtcatattttattaatttcaaacctcta 480  Q
    ||||| |||||||| |||||||| |||||| ||||  |||||||||| ||| |||||||||||||| ||| |||||    
T  23768545 ttaaatgttttaaattggtcctt-atctttgttttcgtcatcaatttggtcctattttattaattttaaatctcta 23768471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 405 - 501
Target Start/End: Original strand, 9189450 - 9189546
Alignment:
Q  405 ttaaacgttttaaaatggtcctttatctttcttttaatcatcaatttagtcatattttattaatttcaaacctctacgaaagaa-accgttggataaa 501  Q
    |||||||||| ||  |||||||| |||||| |||   |||||||||| |||||||||||||||||| ||| | |||  |||||| |||||||||||||    
T  9189450 ttaaacgtttcaatttggtcctt-atctttgtttctgtcatcaatttggtcatattttattaattttaaatccctaaaaaagaagaccgttggataaa 9189546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 404 - 533
Target Start/End: Original strand, 32157 - 32285
Alignment:
Q  404 gttaaacgttttaaaatggtcctttatctttcttttaatcatcaatttagtcatattttattaatttcaaacctctacgaaagaa-accgttggataaaa 502  Q
    ||||||||||||||| ||||  ||||||||| |||||  ||||||||| ||| |||||||||||||| ||||| ||  ||||||| ||  |||||||||     
T  32157 gttaaacgttttaaattggttatttatctttgttttagccatcaatttggtcctattttattaattttaaaccccttagaaagaagactattggataaa- 32255  T
Q  503 ggaggtccatcagatctaaaagtgtatcacc 533  Q
     |||| ||||||||||||| | |||||||||    
T  32256 -gaggcccatcagatctaacaatgtatcacc 32285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 404 - 533
Target Start/End: Original strand, 27886 - 28016
Alignment:
Q  404 gttaaacgttttaaaatggtcctttatctttcttttaatcatcaatttagtcatattttattaatttcaaacctctacgaaagaaacc---gttggataa 500  Q
    ||||||||||| ||||||||| ||||||||| |||||  |||||| || ||| |||||||||||||| ||| | ||   ||||||  |    ||||||||    
T  27886 gttaaacgtttcaaaatggtcatttatctttgttttagccatcaagttggtcctattttattaattttaaatcccttaaaaagaagactattttggataa 27985  T
Q  501 aaggaggtccatcagatctaaaagtgtatcacc 533  Q
    |  ||||||||||||||||||||||||||||||    
T  27986 a--gaggtccatcagatctaaaagtgtatcacc 28016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 427 - 503
Target Start/End: Complemental strand, 85115 - 85038
Alignment:
Q  427 ttatctttcttttaatcatcaatttagtcatattttattaatttcaaacctctacgaaagaa-accgttggataaaag 503  Q
    |||||||| ||||  |||||||||| |||||||||||||||||| ||| | |||  |||||| |||||||||||||||    
T  85115 ttatctttatttttgtcatcaatttggtcatattttattaattttaaatccctaaaaaagaagaccgttggataaaag 85038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 615 - 650
Target Start/End: Complemental strand, 48182 - 48147
Alignment:
Q  615 acacctccaatttcttaaatccagaaatcatcaaca 650  Q
    ||||||||||||||||||||||||||||| ||||||    
T  48182 acacctccaatttcttaaatccagaaatcgtcaaca 48147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University