View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5164_high_6 (Length: 383)

Name: NF5164_high_6
Description: NF5164
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5164_high_6
NF5164_high_6
[»] scaffold0291 (1 HSPs)
scaffold0291 (242-383)||(7883-8024)
[»] chr7 (41 HSPs)
chr7 (243-383)||(30055498-30055639)
chr7 (246-383)||(37109847-37109984)
chr7 (244-383)||(18797302-18797439)
chr7 (244-383)||(17842635-17842774)
chr7 (246-379)||(27283719-27283852)
chr7 (242-383)||(38258516-38258657)
chr7 (247-383)||(24211717-24211853)
chr7 (246-383)||(7334769-7334906)
chr7 (245-383)||(31579113-31579256)
chr7 (246-383)||(5657530-5657667)
chr7 (246-379)||(37346997-37347130)
chr7 (244-382)||(32821103-32821241)
chr7 (244-383)||(10481576-10481717)
chr7 (243-383)||(12390679-12390819)
chr7 (240-383)||(21991605-21991748)
chr7 (239-382)||(31520774-31520916)
chr7 (245-383)||(43686015-43686152)
chr7 (271-383)||(29173540-29173652)
chr7 (247-383)||(33688311-33688446)
chr7 (248-383)||(44413428-44413564)
chr7 (247-383)||(48928613-48928748)
chr7 (260-383)||(22687228-22687351)
chr7 (244-379)||(26524380-26524515)
chr7 (244-383)||(41765127-41765266)
chr7 (241-379)||(8861255-8861393)
chr7 (248-382)||(23111167-23111301)
chr7 (248-358)||(27421453-27421563)
chr7 (246-383)||(4582894-4583031)
chr7 (245-383)||(32432431-32432564)
chr7 (246-383)||(6546494-6546631)
chr7 (244-356)||(9355902-9356014)
chr7 (286-377)||(38053501-38053592)
chr7 (246-383)||(15612808-15612944)
chr7 (273-383)||(26980325-26980435)
chr7 (246-376)||(34362205-34362334)
chr7 (270-383)||(48928346-48928458)
chr7 (248-383)||(11071182-11071318)
chr7 (248-383)||(25691593-25691729)
chr7 (246-356)||(12165727-12165837)
chr7 (246-341)||(37704143-37704238)
chr7 (246-383)||(10359264-10359400)
[»] chr4 (51 HSPs)
chr4 (246-383)||(19089527-19089664)
chr4 (245-383)||(37663815-37663951)
chr4 (236-383)||(25701131-25701278)
chr4 (244-383)||(34361566-34361704)
chr4 (245-383)||(25184112-25184250)
chr4 (245-383)||(879622-879760)
chr4 (244-383)||(55477965-55478108)
chr4 (236-383)||(29584274-29584419)
chr4 (248-383)||(17173292-17173427)
chr4 (244-379)||(32912658-32912793)
chr4 (245-383)||(42199728-42199866)
chr4 (248-383)||(17167715-17167850)
chr4 (248-383)||(34948171-34948306)
chr4 (246-383)||(19440722-19440860)
chr4 (243-382)||(50764732-50764866)
chr4 (246-383)||(28003060-28003197)
chr4 (246-379)||(39397918-39398051)
chr4 (248-383)||(27396618-27396753)
chr4 (248-382)||(36493763-36493897)
chr4 (245-374)||(37287732-37287862)
chr4 (248-376)||(47253751-47253878)
chr4 (235-373)||(3042600-3042738)
chr4 (237-383)||(4597984-4598129)
chr4 (246-383)||(49375966-49376104)
chr4 (242-383)||(50697238-50697378)
chr4 (243-382)||(35021110-35021249)
chr4 (246-376)||(7703517-7703647)
chr4 (243-348)||(4205113-4205218)
chr4 (246-379)||(55241182-55241315)
chr4 (243-383)||(38011851-38011991)
chr4 (288-383)||(23761114-23761209)
chr4 (241-376)||(30002705-30002840)
chr4 (244-330)||(4396324-4396410)
chr4 (249-379)||(6864038-6864168)
chr4 (249-383)||(32592096-32592230)
chr4 (241-338)||(32579439-32579536)
chr4 (271-383)||(54499312-54499425)
chr4 (244-383)||(9139245-9139382)
chr4 (246-330)||(53124287-53124371)
chr4 (245-376)||(35025669-35025800)
chr4 (260-382)||(5048040-5048162)
chr4 (284-383)||(46888231-46888330)
chr4 (247-357)||(37775670-37775780)
chr4 (307-383)||(4934276-4934353)
chr4 (248-304)||(52516599-52516655)
chr4 (244-310)||(17272009-17272075)
chr4 (248-383)||(33341397-33341535)
chr4 (244-328)||(7152235-7152319)
chr4 (252-294)||(52195645-52195687)
chr4 (287-335)||(23518425-23518473)
chr4 (246-294)||(52102915-52102963)
[»] chr1 (50 HSPs)
chr1 (236-377)||(32267020-32267161)
chr1 (244-383)||(15382927-15383066)
chr1 (247-383)||(10922724-10922860)
chr1 (256-383)||(28564824-28564951)
chr1 (245-383)||(18422646-18422784)
chr1 (245-383)||(30254419-30254556)
chr1 (245-383)||(19899812-19899950)
chr1 (243-383)||(37618935-37619079)
chr1 (248-383)||(15752027-15752162)
chr1 (245-383)||(2959743-2959881)
chr1 (272-383)||(9903097-9903208)
chr1 (246-383)||(23999343-23999480)
chr1 (246-383)||(30326995-30327132)
chr1 (243-383)||(34012420-34012560)
chr1 (244-382)||(16415639-16415778)
chr1 (246-383)||(38823210-38823347)
chr1 (286-383)||(51128895-51128992)
chr1 (243-383)||(11742394-11742533)
chr1 (235-379)||(27763358-27763500)
chr1 (243-383)||(48620630-48620770)
chr1 (256-379)||(37451292-37451414)
chr1 (246-383)||(3309144-3309280)
chr1 (245-345)||(30254853-30254952)
chr1 (248-383)||(28769651-28769785)
chr1 (259-379)||(4330288-4330410)
chr1 (246-383)||(7079106-7079254)
chr1 (243-376)||(1547280-1547413)
chr1 (244-383)||(8222125-8222261)
chr1 (242-383)||(39393375-39393516)
chr1 (246-383)||(42721035-42721172)
chr1 (286-382)||(32216091-32216187)
chr1 (248-383)||(46931406-46931544)
chr1 (248-383)||(41926161-41926296)
chr1 (252-383)||(47279191-47279322)
chr1 (245-383)||(10182051-10182189)
chr1 (247-382)||(14758038-14758173)
chr1 (246-383)||(27267242-27267376)
chr1 (262-383)||(27533023-27533144)
chr1 (246-383)||(47682537-47682673)
chr1 (246-383)||(31621596-31621733)
chr1 (241-379)||(238560-238697)
chr1 (242-340)||(15168081-15168179)
chr1 (246-383)||(21289661-21289805)
chr1 (286-383)||(3534968-3535065)
chr1 (241-310)||(22170745-22170814)
chr1 (286-383)||(40884849-40884946)
chr1 (246-383)||(27227528-27227657)
chr1 (248-358)||(27563973-27564084)
chr1 (333-382)||(25160715-25160764)
chr1 (239-279)||(4964062-4964102)
[»] chr3 (53 HSPs)
chr3 (245-383)||(3655250-3655388)
chr3 (246-382)||(37203058-37203194)
chr3 (243-383)||(47481510-47481650)
chr3 (245-383)||(26941308-26941446)
chr3 (245-383)||(40552307-40552445)
chr3 (246-383)||(20373344-20373481)
chr3 (246-379)||(37157699-37157831)
chr3 (246-383)||(4015451-4015588)
chr3 (246-383)||(51213029-51213166)
chr3 (292-383)||(42506123-42506214)
chr3 (244-383)||(48354930-48355069)
chr3 (239-383)||(21009850-21009997)
chr3 (239-383)||(35844310-35844454)
chr3 (245-383)||(7327530-7327669)
chr3 (245-383)||(52040970-52041109)
chr3 (244-383)||(4761697-4761838)
chr3 (248-383)||(43975936-43976068)
chr3 (246-383)||(54505799-54505935)
chr3 (256-383)||(29099356-29099483)
chr3 (245-383)||(11466814-11466952)
chr3 (248-382)||(46297811-46297945)
chr3 (229-383)||(54828749-54828902)
chr3 (243-383)||(34132923-34133063)
chr3 (246-383)||(45174494-45174633)
chr3 (261-383)||(11357412-11357535)
chr3 (245-383)||(44186549-44186687)
chr3 (244-383)||(22450957-22451096)
chr3 (234-383)||(53229200-53229350)
chr3 (248-383)||(24708165-24708295)
chr3 (246-383)||(27480427-27480564)
chr3 (259-383)||(40935995-40936119)
chr3 (244-383)||(21193595-21193734)
chr3 (243-383)||(33378833-33378970)
chr3 (286-383)||(2007964-2008061)
chr3 (239-382)||(46994710-46994842)
chr3 (244-383)||(39282642-39282780)
chr3 (286-383)||(3362284-3362381)
chr3 (249-383)||(22446112-22446247)
chr3 (246-330)||(44891498-44891581)
chr3 (274-383)||(53176074-53176182)
chr3 (242-310)||(55343405-55343473)
chr3 (238-281)||(53175706-53175749)
chr3 (242-383)||(32373459-32373598)
chr3 (286-383)||(24489010-24489107)
chr3 (247-376)||(25579731-25579860)
chr3 (289-330)||(41585408-41585449)
chr3 (286-330)||(33698219-33698263)
chr3 (272-327)||(2613907-2613962)
chr3 (239-294)||(19606914-19606969)
chr3 (243-294)||(47870211-47870262)
chr3 (247-341)||(11835701-11835790)
chr3 (247-303)||(29163839-29163895)
chr3 (242-294)||(42665541-42665593)
[»] chr8 (36 HSPs)
chr8 (245-383)||(1150159-1150297)
chr8 (246-383)||(10555256-10555393)
chr8 (255-382)||(37970574-37970701)
chr8 (244-383)||(43643649-43643788)
chr8 (245-383)||(30654637-30654775)
chr8 (243-383)||(1204923-1205063)
chr8 (244-383)||(36695020-36695159)
chr8 (245-383)||(27082892-27083030)
chr8 (242-383)||(34894962-34895103)
chr8 (258-382)||(23854486-23854610)
chr8 (245-383)||(16446929-16447067)
chr8 (259-383)||(31933940-31934064)
chr8 (246-383)||(12876108-12876245)
chr8 (239-383)||(6098572-6098716)
chr8 (244-383)||(38643975-38644114)
chr8 (246-383)||(13307622-13307759)
chr8 (248-383)||(465843-465978)
chr8 (246-383)||(5300000-5300137)
chr8 (245-358)||(8803889-8803998)
chr8 (243-383)||(9864144-9864284)
chr8 (260-383)||(11727037-11727160)
chr8 (244-383)||(16222860-16222999)
chr8 (246-383)||(41362517-41362651)
chr8 (246-310)||(15009241-15009305)
chr8 (246-379)||(44869495-44869629)
chr8 (245-383)||(34952085-34952223)
chr8 (307-383)||(1149686-1149762)
chr8 (244-379)||(40862416-40862551)
chr8 (244-330)||(24823379-24823465)
chr8 (248-383)||(7891011-7891137)
chr8 (246-336)||(33906223-33906313)
chr8 (246-299)||(4133146-4133199)
chr8 (237-294)||(34685728-34685785)
chr8 (234-282)||(4108924-4108972)
chr8 (335-383)||(35459765-35459813)
chr8 (242-383)||(39099173-39099304)
[»] chr6 (18 HSPs)
chr6 (243-382)||(4318871-4319010)
chr6 (244-383)||(1945831-1945971)
chr6 (244-383)||(5627389-5627528)
chr6 (245-383)||(7055262-7055400)
chr6 (245-383)||(8513232-8513370)
chr6 (239-383)||(29182156-29182300)
chr6 (245-383)||(3879986-3880124)
chr6 (246-383)||(7235082-7235218)
chr6 (246-383)||(33893050-33893186)
chr6 (248-383)||(6088910-6089045)
chr6 (262-383)||(15491631-15491752)
chr6 (243-377)||(18498430-18498565)
chr6 (272-383)||(21017159-21017270)
chr6 (248-383)||(30353405-30353540)
chr6 (247-383)||(20768087-20768221)
chr6 (300-382)||(6091231-6091313)
chr6 (286-383)||(33618874-33618971)
chr6 (244-294)||(19631747-19631797)
[»] chr2 (41 HSPs)
chr2 (246-383)||(37905709-37905845)
chr2 (246-383)||(33551052-33551189)
chr2 (245-383)||(11366447-11366585)
chr2 (277-383)||(43648311-43648416)
chr2 (243-383)||(19289389-19289524)
chr2 (246-358)||(26357577-26357689)
chr2 (248-383)||(3176941-3177076)
chr2 (243-377)||(2325442-2325576)
chr2 (245-383)||(19424694-19424832)
chr2 (244-382)||(39167430-39167568)
chr2 (246-358)||(35958909-35959021)
chr2 (248-383)||(41463916-41464051)
chr2 (245-383)||(17071803-17071941)
chr2 (245-383)||(17054162-17054300)
chr2 (248-383)||(36641988-36642123)
chr2 (248-383)||(43770905-43771039)
chr2 (245-383)||(4264143-4264281)
chr2 (247-383)||(13711465-13711601)
chr2 (244-383)||(29242204-29242343)
chr2 (246-383)||(4478368-4478506)
chr2 (248-382)||(33660435-33660569)
chr2 (244-383)||(4166920-4167059)
chr2 (245-383)||(27350005-27350143)
chr2 (244-383)||(31570800-31570939)
chr2 (246-383)||(4763628-4763768)
chr2 (246-383)||(33902068-33902203)
chr2 (246-383)||(19313852-19313988)
chr2 (244-310)||(41960881-41960947)
chr2 (286-377)||(33709304-33709395)
chr2 (245-383)||(5881533-5881676)
chr2 (243-330)||(18494387-18494474)
chr2 (246-383)||(44913662-44913800)
chr2 (246-328)||(41465509-41465591)
chr2 (246-312)||(31861895-31861961)
chr2 (246-294)||(18514771-18514819)
chr2 (245-281)||(39788590-39788626)
chr2 (343-383)||(45327817-45327857)
chr2 (246-281)||(22963400-22963435)
chr2 (246-281)||(22998042-22998077)
chr2 (240-294)||(19093407-19093461)
chr2 (245-293)||(43446463-43446511)
[»] chr5 (56 HSPs)
chr5 (242-383)||(24886098-24886241)
chr5 (248-383)||(699152-699287)
chr5 (243-383)||(22974120-22974260)
chr5 (244-383)||(38528275-38528413)
chr5 (235-383)||(31705650-31705797)
chr5 (244-382)||(5112352-5112490)
chr5 (242-383)||(14919566-14919708)
chr5 (243-383)||(8741924-8742065)
chr5 (246-382)||(7693230-7693366)
chr5 (245-383)||(9200232-9200370)
chr5 (244-382)||(35826522-35826660)
chr5 (246-383)||(15724490-15724625)
chr5 (243-383)||(19119856-19119996)
chr5 (244-383)||(27330304-27330441)
chr5 (237-383)||(22980784-22980930)
chr5 (286-383)||(30969362-30969459)
chr5 (244-383)||(22255179-22255319)
chr5 (245-383)||(1429183-1429321)
chr5 (246-383)||(23116260-23116397)
chr5 (246-383)||(31786684-31786821)
chr5 (246-383)||(35511515-35511652)
chr5 (244-383)||(12910348-12910492)
chr5 (240-383)||(17158069-17158214)
chr5 (247-383)||(32563150-32563286)
chr5 (248-383)||(5837557-5837692)
chr5 (244-383)||(36860421-36860560)
chr5 (254-383)||(43308690-43308819)
chr5 (258-383)||(27318525-27318650)
chr5 (259-383)||(26268087-26268211)
chr5 (244-341)||(13956425-13956522)
chr5 (246-383)||(14409365-14409501)
chr5 (246-383)||(22019632-22019769)
chr5 (246-383)||(36866762-36866899)
chr5 (246-379)||(5829897-5830034)
chr5 (239-383)||(8466738-8466881)
chr5 (248-383)||(25500964-25501099)
chr5 (245-383)||(39572818-39572956)
chr5 (246-383)||(40133385-40133522)
chr5 (248-383)||(7208902-7209037)
chr5 (246-330)||(26317775-26317859)
chr5 (279-330)||(22255608-22255659)
chr5 (312-383)||(35504431-35504502)
chr5 (259-377)||(8436979-8437097)
chr5 (258-379)||(33908245-33908366)
chr5 (245-327)||(35933901-35933983)
chr5 (286-382)||(25668690-25668785)
chr5 (248-383)||(11898004-11898139)
chr5 (325-383)||(15992578-15992636)
chr5 (317-383)||(21088804-21088870)
chr5 (286-383)||(28416565-28416662)
chr5 (303-379)||(6824521-6824599)
chr5 (247-294)||(21320752-21320799)
chr5 (246-323)||(16004474-16004552)
chr5 (289-330)||(5748478-5748519)
chr5 (233-282)||(12081285-12081334)
chr5 (288-353)||(42342775-42342840)
[»] scaffold0061 (1 HSPs)
scaffold0061 (248-383)||(43959-44094)
[»] scaffold0017 (1 HSPs)
scaffold0017 (248-383)||(154693-154828)
[»] scaffold0022 (1 HSPs)
scaffold0022 (248-383)||(146064-146199)
[»] scaffold0002 (4 HSPs)
scaffold0002 (245-383)||(133-271)
scaffold0002 (272-382)||(94432-94542)
scaffold0002 (300-383)||(408477-408559)
scaffold0002 (244-298)||(408702-408756)
[»] scaffold0009 (2 HSPs)
scaffold0009 (245-330)||(42347-42432)
scaffold0009 (243-310)||(100818-100885)
[»] scaffold0318 (1 HSPs)
scaffold0318 (248-383)||(11908-12046)


Alignment Details
Target: scaffold0291 (Bit Score: 114; Significance: 1e-57; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 242 - 383
Target Start/End: Original strand, 7883 - 8024
Alignment:
Q  242 taaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtaca 341  Q
    ||||| |||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  7883 taaagaaaaattctatggtgaagttataagaatgacttttttgatgaagttaacactataacatcaaaattgtaatgagtaacaccccactgtttgtaca 7982  T
Q  342 atgacattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    ||||||| ||||||||| || |||||||||||||||||||||    
T  7983 atgacatcaaaagttcagtcctcatagtatcatcaattcatc 8024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 98; Significance: 4e-48; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 243 - 383
Target Start/End: Original strand, 30055498 - 30055639
Alignment:
Q  243 aaaggaaaattttatggtgaagttataagaatgactttttg-gatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtaca 341  Q
    ||||||||||| ||||||||||| ||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||    
T  30055498 aaaggaaaattctatggtgaagtcataagaatgactttttttgatgaagttaacactataatatcaaaattgtaatgagtaacaccccactgtttgtaca 30055597  T
Q  342 atgacattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    ||||||| ||||||||| || |||||||||||| ||||||||    
T  30055598 atgacatcaaaagttcagtcctcatagtatcattaattcatc 30055639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 246 - 383
Target Start/End: Original strand, 37109847 - 37109984
Alignment:
Q  246 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 345  Q
    |||||||| ||||||||||| |||| ||||||||||| | |||||||||||||||||||| |||| |||||||||||||||||||  |||||||||||||    
T  37109847 ggaaaattctatggtgaagtcataaaaatgacttttttggtgaagttaacactataacataaaaaatgtaatgagtaacaccccaccgtttgtacaatga 37109946  T
Q  346 cattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    ||| ||||||||| |||| ||| |||||||||||||||    
T  37109947 catcaaaagttcagtcattataatatcatcaattcatc 37109984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 244 - 383
Target Start/End: Original strand, 18797302 - 18797439
Alignment:
Q  244 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaat 343  Q
    |||||||||| ||||||||||| || ||||||||||||| | ||||||||||||||  |||| |||| ||||||||||||||||||| ||||||||||||    
T  18797302 aaggaaaattctatggtgaagtcatgagaatgacttttttggtgaagttaacacta--acataaaaaatgtaatgagtaacaccccactgtttgtacaat 18797399  T
Q  344 gacattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    ||||| |||||||||||| ||||||||||||||| |||||    
T  18797400 gacatcaaaagttcaatcctcatagtatcatcaactcatc 18797439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 244 - 383
Target Start/End: Complemental strand, 17842774 - 17842635
Alignment:
Q  244 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaat 343  Q
    |||||||||| ||||||||||| |||| ||||||||||| | |||||||||||||||||||| |||| |||||||||||||||||||  |||||||||||    
T  17842774 aaggaaaattctatggtgaagtcataaaaatgacttttttggtgaagttaacactataacataaaaaatgtaatgagtaacaccccaccgtttgtacaat 17842675  T
Q  344 gacattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    ||||| ||||| ||| |||| ||| |||||||||||||||    
T  17842674 gacatcaaaagctcagtcattataatatcatcaattcatc 17842635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 246 - 379
Target Start/End: Original strand, 27283719 - 27283852
Alignment:
Q  246 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 345  Q
    |||||||| |||||||||||||||| ||||| ||||| | ||||||||||||||||||||||||| |||||||||||||||||||  |||||||||||||    
T  27283719 ggaaaattctatggtgaagttataaaaatgatttttttggtgaagttaacactataacatcaaaaatgtaatgagtaacaccccaccgtttgtacaatga 27283818  T
Q  346 cattaaaagttcaatcatcatagtatcatcaatt 379  Q
     || ||||||||| || ||||||||| |||||||    
T  27283819 aatcaaaagttcagtcctcatagtattatcaatt 27283852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 242 - 383
Target Start/End: Original strand, 38258516 - 38258657
Alignment:
Q  242 taaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtaca 341  Q
    |||| ||||||| || |||||||| |||| ||||| ||||| | |||||||||||||||||||| |||| |||||||||||||||| ||  |||||||||    
T  38258516 taaaagaaaattctacggtgaagtcataaaaatgatttttttggtgaagttaacactataacataaaaaatgtaatgagtaacaccacaccgtttgtaca 38258615  T
Q  342 atgacattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    ||||||| |||||||||||| |||||||||||||||||||||    
T  38258616 atgacatcaaaagttcaatcctcatagtatcatcaattcatc 38258657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 247 - 383
Target Start/End: Original strand, 24211717 - 24211853
Alignment:
Q  247 gaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgac 346  Q
    ||||||| ||||||||||| |||||||||||||||| | ||||||||||||||||||||||||| ||||||||||||||||| | ||||| || |||| |    
T  24211717 gaaaattctatggtgaagtcataagaatgacttttttggtgaagttaacactataacatcaaaaatgtaatgagtaacaccctactgtttatagaatggc 24211816  T
Q  347 attaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    || |||||||||  | |||||||||||||||||||||    
T  24211817 atcaaaagttcagccctcatagtatcatcaattcatc 24211853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 246 - 383
Target Start/End: Original strand, 7334769 - 7334906
Alignment:
Q  246 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 345  Q
    |||||||| || ||||||||  | ||||||||||||| |||||||||||||||||||||| |||  ||||||||||||||||||| ||||||||||||||    
T  7334769 ggaaaattctacggtgaagtcgtgagaatgacttttttgatgaagttaacactataacataaaatatgtaatgagtaacaccccactgtttgtacaatga 7334868  T
Q  346 cattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    ||| ||||||||| |  ||||||||||||||| |||||    
T  7334869 catcaaaagttcagttctcatagtatcatcaactcatc 7334906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 245 - 383
Target Start/End: Complemental strand, 31579256 - 31579113
Alignment:
Q  245 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatg-----tttgta 339  Q
    ||||||||| ||||||||||| |||||||| | ||||| | ||||||||||||||||||||||||| ||||||||||||||||||| ||     ||| ||    
T  31579256 aggaaaattctatggtgaagtcataagaataatttttttggtgaagttaacactataacatcaaaaatgtaatgagtaacaccccactgtttaatttata 31579157  T
Q  340 caatgacattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    ||||||||| ||||||||| || |||||||||||||||||||||    
T  31579156 caatgacatcaaaagttcagtcttcatagtatcatcaattcatc 31579113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 246 - 383
Target Start/End: Complemental strand, 5657667 - 5657530
Alignment:
Q  246 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 345  Q
    |||||||| ||||||||||| || ||||||||||||    ||||||||||||||||||||||||| |||  |||||||||||||| |||||||||| ||     
T  5657667 ggaaaattctatggtgaagtcatgagaatgacttttctagtgaagttaacactataacatcaaaagtgttgtgagtaacaccccactgtttgtacagtgg 5657568  T
Q  346 cattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    ||| ||||||||| || |||||||||||||||||||||    
T  5657567 catcaaaagttcagtcttcatagtatcatcaattcatc 5657530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 246 - 379
Target Start/End: Original strand, 37346997 - 37347130
Alignment:
Q  246 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 345  Q
    |||||||||||||||||||| || | ||||| ||||| | ||||||||| |||||| |||||||| | ||||||||||||||||| |||||||||| |||    
T  37346997 ggaaaattttatggtgaagtcatgaaaatgatttttttggtgaagttaatactataccatcaaaaatataatgagtaacaccccattgtttgtacagtga 37347096  T
Q  346 cattaaaagttcaatcatcatagtatcatcaatt 379  Q
    ||| ||||||||| || |||||||||||||||||    
T  37347097 catcaaaagttcagtcctcatagtatcatcaatt 37347130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 244 - 382
Target Start/End: Complemental strand, 32821241 - 32821103
Alignment:
Q  244 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaat 343  Q
    |||||||||| ||||||||||| || | ||||| ||||| | ||||||||||| ||||||||||||| |||| |||||||||| ||| ||||||||||||    
T  32821241 aaggaaaattctatggtgaagtcatgaaaatgatttttttggtgaagttaacaatataacatcaaaaatgtagtgagtaacacaccactgtttgtacaat 32821142  T
Q  344 gacattaaaagttcaatcatcatagtatcatcaattcat 382  Q
    | ||| ||||||||| || || |||||||||||||||||    
T  32821141 ggcatcaaaagttcagtcctcgtagtatcatcaattcat 32821103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 244 - 383
Target Start/End: Original strand, 10481576 - 10481717
Alignment:
Q  244 aaggaaaattttatggtgaagttataagaatgactttttgga-tgaagttaacactataacatcaaaattgtaatgagtaacaccccaa-tgtttgtaca 341  Q
    |||||||||| |||||| ||||||  |||||||||||||  | |||||||||||||||||||| |||| | |||||||||||||||| | ||||||||||    
T  10481576 aaggaaaattctatggtaaagttaggagaatgactttttttaatgaagttaacactataacataaaaaatataatgagtaacacccccactgtttgtaca 10481675  T
Q  342 atgacattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    ||||||| |||| |||| || | |||||||||||||||||||    
T  10481676 atgacatcaaaaattcagtctttatagtatcatcaattcatc 10481717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 243 - 383
Target Start/End: Complemental strand, 12390819 - 12390679
Alignment:
Q  243 aaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaa 342  Q
    ||||||||||| ||||||||||| || |||  |||||||| | ||||||||||||||||||||||||| |||||||||||||| |||| ||||||| ||     
T  12390819 aaaggaaaattctatggtgaagtcatcagatcgacttttttggtgaagttaacactataacatcaaaagtgtaatgagtaacatcccactgtttgtgcag 12390720  T
Q  343 tgacattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    |||||| |||||||   ||  |||||||| |||||||||||    
T  12390719 tgacatcaaaagttatgtccccatagtattatcaattcatc 12390679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 240 - 383
Target Start/End: Original strand, 21991605 - 21991748
Alignment:
Q  240 aataaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgta 339  Q
    |||| ||||||||| || |||||||| || ||||||| ||||  | |||||||||||||||| ||||||||||||   ||||||||||||| ||||||||    
T  21991605 aatataggaaaattctagggtgaagtcatgagaatgatttttatggtgaagttaacactatagcatcaaaattgttgcgagtaacaccccactgtttgta 21991704  T
Q  340 caatgacattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    || || ||| ||||||||| ||  ||||||||||||||||||||    
T  21991705 cagtgtcatcaaaagttcagtccccatagtatcatcaattcatc 21991748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 239 - 382
Target Start/End: Complemental strand, 31520916 - 31520774
Alignment:
Q  239 aaataaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgt 338  Q
    |||||| ||||||||||||| |||||| || | ||||||||||| | ||||||||| |||||| |||||||| | || |||||||||| ||| |||||||    
T  31520916 aaataacggaaaattttatgatgaagtcatgaaaatgacttttttggtgaagttaatactataccatcaaaaatatagtgagtaacactccattgtttgt 31520817  T
Q  339 acaatgacattaaaagttcaatcatcatagtatcatcaattcat 382  Q
    ||| |||||| ||||||||| ||  |||||||||||||||||||    
T  31520816 acagtgacatcaaaagttcagtc-ccatagtatcatcaattcat 31520774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 245 - 383
Target Start/End: Original strand, 43686015 - 43686152
Alignment:
Q  245 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatg 344  Q
    ||||||||| ||||||||||| |  | ||||||||||||| ||||||||||||||||| ||||||| |||  ||||||||| |||| |||||||||||||    
T  43686015 aggaaaattctatggtgaagtcacgaaaatgactttttgggtgaagttaacactataatatcaaaaatgttgtgagtaaca-cccactgtttgtacaatg 43686113  T
Q  345 acattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
     ||| ||||||||| ||   ||||||||| |||||||||    
T  43686114 gcatcaaaagttcagtccctatagtatcaacaattcatc 43686152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 271 - 383
Target Start/End: Original strand, 29173540 - 29173652
Alignment:
Q  271 gaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagttcaatcatcatagta 370  Q
    |||||||||||  | ||||||||||||| ||  ||||||| |||  |||||||||| ||| ||||||||||||||||| ||||||||| || ||||||||    
T  29173540 gaatgacttttctggtgaagttaacactgtagtatcaaaagtgttgtgagtaacactccactgtttgtacaatgacatcaaaagttcagtcctcatagta 29173639  T
Q  371 tcatcaattcatc 383  Q
    |||||||||||||    
T  29173640 tcatcaattcatc 29173652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 247 - 383
Target Start/End: Complemental strand, 33688446 - 33688311
Alignment:
Q  247 gaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgac 346  Q
    ||||||| |||||||||||||| ||||||||||||  | | ||||||||||||||||||||||| ||| |||||||||| || | ||||||| || || |    
T  33688446 gaaaattatatggtgaagttatgagaatgacttttctggt-aagttaacactataacatcaaaagtgttatgagtaacatcctactgtttgtccagtggc 33688348  T
Q  347 attaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    || ||||||||| ||   |||||||||||||||||||    
T  33688347 atcaaaagttcagtctctatagtatcatcaattcatc 33688311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 248 - 383
Target Start/End: Complemental strand, 44413564 - 44413428
Alignment:
Q  248 aaaattttatggtgaagttataagaatgactttttgga-tgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgac 346  Q
    |||||| |||||| |||| || | |||||||||||  | ||||||||||||||||||||||||| | || ||||||||||||||||||||||||| |||     
T  44413564 aaaattctatggtaaagtcatgaaaatgactttttttaatgaagttaacactataacatcaaaaatatagtgagtaacaccccaatgtttgtacactgaa 44413465  T
Q  347 attaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    || ||||||||  ||  ||||||||| ||||||||||    
T  44413464 atcaaaagttcggtctccatagtatcttcaattcatc 44413428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 247 - 383
Target Start/End: Complemental strand, 48928748 - 48928613
Alignment:
Q  247 gaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgac 346  Q
    ||||||||||||||||||| || ||||||||||||  | |||||| |||||||||||||||||| |||| |||||| ||||||| | |||||||  || |    
T  48928748 gaaaattttatggtgaagtcatgagaatgacttttctggtgaagtcaacactataacatcaaaagtgtagtgagtagcaccccactatttgtacggtgcc 48928649  T
Q  347 attaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    || ||||||||| ||  |||||||| |||||||||||    
T  48928648 atcaaaagttcagtc-ccatagtattatcaattcatc 48928613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 260 - 383
Target Start/End: Original strand, 22687228 - 22687351
Alignment:
Q  260 tgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagttcaa 359  Q
    |||||| || ||||||||||||  ||||||||||||||||||||||||||| |||  |||||||||| ||| ||||||| || ||  || |||||||||     
T  22687228 tgaagtcatgagaatgacttttctgatgaagttaacactataacatcaaaaatgttgtgagtaacactccactgtttgtgcagtggtatcaaaagttcag 22687327  T
Q  360 tcatcatagtatcatcaattcatc 383  Q
    ||  ||||||||||||||||||||    
T  22687328 tccccatagtatcatcaattcatc 22687351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 244 - 379
Target Start/End: Complemental strand, 26524515 - 26524380
Alignment:
Q  244 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaat 343  Q
    |||||||||| ||||||||||| || ||||||||||||  | ||| ||||||||||||||||||||| |||  ||| |||||| ||| ||||||| || |    
T  26524515 aaggaaaattctatggtgaagtcatgagaatgacttttctggtgatgttaacactataacatcaaaaatgttgtgactaacactccattgtttgtgcagt 26524416  T
Q  344 gacattaaaagttcaatcatcatagtatcatcaatt 379  Q
    | ||| |||||| || || |||||||||||||||||    
T  26524415 ggcatcaaaagtccagtcctcatagtatcatcaatt 26524380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 244 - 383
Target Start/End: Complemental strand, 41765266 - 41765127
Alignment:
Q  244 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaat 343  Q
    ||||||||||  |||||||||| || ||||||||||||  ||| |||| || |||||| |||||||| |||| |||||| ||||||| |||||||||  |    
T  41765266 aaggaaaattccatggtgaagtcatgagaatgacttttctgataaagtcaatactatagcatcaaaagtgtagtgagtagcaccccactgtttgtacggt 41765167  T
Q  344 gacattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    | ||| |||||| || || |||||||||||||||||||||    
T  41765166 ggcatcaaaagtccagtcctcatagtatcatcaattcatc 41765127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 241 - 379
Target Start/End: Original strand, 8861255 - 8861393
Alignment:
Q  241 ataaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtac 340  Q
    |||| |||||||| ||||||||||| || ||||||||||||     ||||||||||||||| |||||||| ||| |||| |||||||||| |||||||||    
T  8861255 ataatggaaaattctatggtgaagtcatgagaatgacttttctcgcgaagttaacactatagcatcaaaagtgttatgaataacaccccactgtttgtac 8861354  T
Q  341 aatgacattaaaagttcaatcatcatagtatcatcaatt 379  Q
    | || ||| ||||||| | ||  ||||||||||||||||    
T  8861355 agtggcatcaaaagttaagtccccatagtatcatcaatt 8861393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 248 - 382
Target Start/End: Original strand, 23111167 - 23111301
Alignment:
Q  248 aaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgaca 347  Q
    |||||| | ||||||||| || | ||||| ||||  | ||||||||||||||||||||||||| | |  |||||||||| ||| | ||||||||||| ||    
T  23111167 aaaattctgtggtgaagtcatgaaaatgatttttctggtgaagttaacactataacatcaaaaatattgtgagtaacacaccactatttgtacaatggca 23111266  T
Q  348 ttaaaagttcaatcatcatagtatcatcaattcat 382  Q
    | |||||||||| |||| |||||||||||||||||    
T  23111267 tcaaaagttcaaccatcgtagtatcatcaattcat 23111301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 248 - 358
Target Start/End: Complemental strand, 27421563 - 27421453
Alignment:
Q  248 aaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgaca 347  Q
    |||||| |||||||||||  | | ||||| ||||| | ||||||||||||||||||||||||| |||  |||||||||| ||| ||||||||||||||||    
T  27421563 aaaattctatggtgaagtcgtgataatgatttttttggtgaagttaacactataacatcaaaagtgttgtgagtaacactccactgtttgtacaatgaca 27421464  T
Q  348 ttaaaagttca 358  Q
    | |||||||||    
T  27421463 tcaaaagttca 27421453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 246 - 383
Target Start/End: Original strand, 4582894 - 4583031
Alignment:
Q  246 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 345  Q
    |||||||| ||||||||||| |  | ||||||||||  | ||||||||| ||||||  ||||||| |||  |||||||||||||| | ||||||||||||    
T  4582894 ggaaaattctatggtgaagtcacgaaaatgacttttctggtgaagttaatactatagtatcaaaaatgttgtgagtaacaccccactatttgtacaatga 4582993  T
Q  346 cattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    ||| ||||||||| ||  |||||||||| |||||||||    
T  4582994 catcaaaagttcagtccccatagtatcaacaattcatc 4583031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 245 - 383
Target Start/End: Original strand, 32432431 - 32432564
Alignment:
Q  245 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatg 344  Q
    ||||||||| ||||||||||| |  | ||||| ||||  | |||||||||||||||     ||||| |||  |||||||||||||| |||||||||||||    
T  32432431 aggaaaattctatggtgaagtcacgaaaatgatttttctggtgaagttaacactat-----caaaaatgttgtgagtaacaccccattgtttgtacaatg 32432525  T
Q  345 acattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    |||| ||||||||| ||  ||||||||||||||||||||    
T  32432526 acatcaaaagttcagtctccatagtatcatcaattcatc 32432564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 246 - 383
Target Start/End: Original strand, 6546494 - 6546631
Alignment:
Q  246 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 345  Q
    |||||||| ||||||||||| |||||||||| ||||    |||||||||||||||| |||||||| |||   ||||||||||||| | |||||||| | |    
T  6546494 ggaaaattctatggtgaagtcataagaatgatttttctagtgaagttaacactatagcatcaaaagtgttgcgagtaacaccccactatttgtacagtaa 6546593  T
Q  346 cattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    ||| ||||||| | |   ||||||||||||||||||||    
T  6546594 catcaaaagtttactatccatagtatcatcaattcatc 6546631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 244 - 356
Target Start/End: Complemental strand, 9356014 - 9355902
Alignment:
Q  244 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaat 343  Q
    |||||||||||||||||||||| || ||||||||  ||| | |||| ||||||||||| ||| |||| |||| |||| || |||||| |||||||||| |    
T  9356014 aaggaaaattttatggtgaagtcatgagaatgaccattttggtgaatttaacactatagcataaaaaatgtagtgagcaataccccactgtttgtacagt 9355915  T
Q  344 gacattaaaagtt 356  Q
    ||||| |||||||    
T  9355914 gacatcaaaagtt 9355902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 286 - 377
Target Start/End: Original strand, 38053501 - 38053592
Alignment:
Q  286 tgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagttcaatcatcatagtatcatcaa 377  Q
    ||||||||| |||||||||| |||| |||||||||||| |||| | ||||||||||||||||| ||||||||| |  ||||||| |||||||    
T  38053501 tgaagttaatactataacataaaaaatgtaatgagtaaaaccctactgtttgtacaatgacatcaaaagttcagttctcatagtgtcatcaa 38053592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 246 - 383
Target Start/End: Complemental strand, 15612944 - 15612808
Alignment:
Q  246 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 345  Q
    |||||||| ||||||||||| || ||||| || |||    |||||||||||||||||||||||| | || ||||||||||||||| |||||||| | ||     
T  15612944 ggaaaattctatggtgaagtcatgagaataacgtttcttgtgaagttaacactataacatcaaagt-gttatgagtaacaccccagtgtttgtagagtgg 15612846  T
Q  346 cattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    ||| ||||||||| ||   ||| |||||||||||||||    
T  15612845 catcaaaagttcagtccctataatatcatcaattcatc 15612808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 273 - 383
Target Start/End: Original strand, 26980325 - 26980435
Alignment:
Q  273 atgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagttcaatcatcatagtatc 372  Q
    |||||||||  | ||||||||||| |||| |||||||| |||  ||||||||||||||  ||||||||| || ||| ||||||||| ||  |||| ||||    
T  26980325 atgacttttatggtgaagttaacattatagcatcaaaagtgttgtgagtaacaccccacggtttgtacagtggcatcaaaagttcagtccccataatatc 26980424  T
Q  373 atcaattcatc 383  Q
    |||||||||||    
T  26980425 atcaattcatc 26980435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 246 - 376
Target Start/End: Complemental strand, 34362334 - 34362205
Alignment:
Q  246 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 345  Q
    |||||||| ||||||||| |||| ||||||||||||      |||||||||||||| |||||||| |||  |||||||||||||| |||||||||| ||     
T  34362334 ggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgagtaacaccccactgtttgtacagtgg 34362235  T
Q  346 cattaaaagttcaatcatcatagtatcatca 376  Q
    || | |||||||| |  ||||||||||||||    
T  34362234 ca-tcaaagttcagttctcatagtatcatca 34362205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 270 - 383
Target Start/End: Complemental strand, 48928458 - 48928346
Alignment:
Q  270 agaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagttcaatcatcatagt 369  Q
    ||||||||||||  | |||||| |||||||||||||||||| |||| |||||| ||||||| | |||||||  || ||| ||||||||| ||  ||||||    
T  48928458 agaatgacttttctggtgaagtcaacactataacatcaaaagtgtagtgagtagcaccccactatttgtacggtgccatcaaaagttcagtc-ccatagt 48928360  T
Q  370 atcatcaattcatc 383  Q
    || |||||||||||    
T  48928359 attatcaattcatc 48928346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 248 - 383
Target Start/End: Original strand, 11071182 - 11071318
Alignment:
Q  248 aaaattttatggtgaagttataagaatg-actttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgac 346  Q
    |||||| ||||||||||| || | |||| | ||||| | | ||||||  |||||| |||||||| | ||  ||||||||| ||| |||||||||| ||||    
T  11071182 aaaattctatggtgaagtcatgaaaatgtatttttttggtaaagttagtactatatcatcaaaaatatagcgagtaacactccactgtttgtacagtgac 11071281  T
Q  347 attaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    || ||||||||| |  |||||||||||||||||||||    
T  11071282 atcaaaagttcagttctcatagtatcatcaattcatc 11071318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 248 - 383
Target Start/End: Complemental strand, 25691729 - 25691593
Alignment:
Q  248 aaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaa-caccccaatgtttgtacaatgac 346  Q
    |||||||||||||||||| || ||||||||||||    ||||||||||||||||||||||||| | |  |||||||  ||| || |||||||||| || |    
T  25691729 aaaattttatggtgaagtcatgagaatgacttttctcgtgaagttaacactataacatcaaaagtattgtgagtaattacctcactgtttgtacagtggc 25691630  T
Q  347 attaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    || || |||||| |  | ||||||| |||||||||||    
T  25691629 atcaacagttcagttcttatagtattatcaattcatc 25691593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 246 - 356
Target Start/End: Original strand, 12165727 - 12165837
Alignment:
Q  246 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 345  Q
    |||||||| || ||||||||  | | ||||||||||  | |||||||||||||||| |||| ||| |||  |||||||||||||| |||||||||| ||     
T  12165727 ggaaaattctacggtgaagtcgttaaaatgacttttctggtgaagttaacactatagcatccaaagtgttgtgagtaacaccccactgtttgtacagtgg 12165826  T
Q  346 cattaaaagtt 356  Q
    ||| |||||||    
T  12165827 catcaaaagtt 12165837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 246 - 341
Target Start/End: Original strand, 37704143 - 37704238
Alignment:
Q  246 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaat-tgtaatgagtaacaccccaatgtttgtaca 341  Q
    |||||||| |||| |||| |||||| ||||| |||||  ||||||||||||||||| ||| ||||  |||| |||||||||||||| ||||||||||    
T  37704143 ggaaaattctatgatgaaattataaaaatgattttttt-atgaagttaacactatagcataaaaaaatgtagtgagtaacaccccattgtttgtaca 37704238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 246 - 383
Target Start/End: Complemental strand, 10359400 - 10359264
Alignment:
Q  246 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 345  Q
    |||||||| ||||||||||| || | ||||||||||  | | || ||||   |||| |||||||| |||| ||||||||| || | | ||| |||| |||    
T  10359400 ggaaaattctatggtgaagtcatgataatgacttttctggtaaaattaatcttatagcatcaaaagtgtagtgagtaacatcctactatttatacagtga 10359301  T
Q  346 cattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    ||| ||||||||| || | |||||||||||||||||||    
T  10359300 catcaaaagttcagtc-tgatagtatcatcaattcatc 10359264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 98; Significance: 4e-48; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 246 - 383
Target Start/End: Complemental strand, 19089664 - 19089527
Alignment:
Q  246 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 345  Q
    |||||||| ||||||||||| |||||||| ||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| |||||||| |||||    
T  19089664 ggaaaattctatggtgaagtcataagaataacttttttgatgaagttaacactataatatcaaaattgtaatgagtaacaccccactgtttgtataatga 19089565  T
Q  346 cattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    ||| ||||||||| || |||||||||||||||||||||    
T  19089564 catcaaaagttcagtcctcatagtatcatcaattcatc 19089527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 245 - 383
Target Start/End: Complemental strand, 37663951 - 37663815
Alignment:
Q  245 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatg 344  Q
    ||||||||| ||||||||||| |||||||||||||||| ||||||||||||||||  |||| |||| ||||||||||||||||||| |||||||||||||    
T  37663951 aggaaaattctatggtgaagtcataagaatgacttttttgatgaagttaacacta--acattaaaactgtaatgagtaacaccccactgtttgtacaatg 37663854  T
Q  345 acattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    |||| ||||||||| || |||||||||||||||||||||    
T  37663853 acatcaaaagttcagtcctcatagtatcatcaattcatc 37663815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 236 - 383
Target Start/End: Complemental strand, 25701278 - 25701131
Alignment:
Q  236 ataaaataaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtt 335  Q
    |||||||||||||||||||||||||||||| || | ||||||||||| | | ||||||||| ||||||||||||| |||| |||||||||||| | ||||    
T  25701278 ataaaataaaggaaaattttatggtgaagtcatgataatgacttttttggtaaagttaacattataacatcaaaagtgtagtgagtaacaccctactgtt 25701179  T
Q  336 tgtacaatgacattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    |||||| |||||| ||||||||| || |||||||||||||||||||||    
T  25701178 tgtacagtgacatcaaaagttcagtcctcatagtatcatcaattcatc 25701131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 244 - 383
Target Start/End: Complemental strand, 34361704 - 34361566
Alignment:
Q  244 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaat 343  Q
    |||||||||| ||||||||||| |||||||||||||||| | |||||||||||||||||||| |||| ||||||||||||||||||| |||||||| |||    
T  34361704 aaggaaaattctatggtgaagtcataagaatgacttttttggtgaagttaacactataacataaaaaatgtaatgagtaacaccccactgtttgtagaat 34361605  T
Q  344 gacattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    |||||||||||||| | | ||||| |||||||||||||||    
T  34361604 gacattaaaagttc-agcctcataatatcatcaattcatc 34361566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 245 - 383
Target Start/End: Original strand, 25184112 - 25184250
Alignment:
Q  245 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatg 344  Q
    ||||||||| ||||||||||| || ||||||||| ||| | ||||||||||||||||||||||||| ||||||||||||||| | | |||||||||||||    
T  25184112 aggaaaattctatggtgaagtcatgagaatgactattttggtgaagttaacactataacatcaaaaatgtaatgagtaacactctactgtttgtacaatg 25184211  T
Q  345 acattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    ||||  ||||||||||| ||||||||||||||| |||||    
T  25184212 acatccaaagttcaatcttcatagtatcatcaactcatc 25184250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 245 - 383
Target Start/End: Complemental strand, 879760 - 879622
Alignment:
Q  245 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatg 344  Q
    |||||||||||| |||||||| || ||||| | ||||| | |||||| |||||||||||||||||| |||||||||||||||| || |||||||||||||    
T  879760 aggaaaattttaaggtgaagtcatgagaataatttttttggtgaagtaaacactataacatcaaaaatgtaatgagtaacacctcattgtttgtacaatg 879661  T
Q  345 acattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    |||| ||||||| |||| ||||||||||||||| |||||    
T  879660 acatcaaaagtttaatcttcatagtatcatcaactcatc 879622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 244 - 383
Target Start/End: Complemental strand, 55478108 - 55477965
Alignment:
Q  244 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacacccca----atgtttgta 339  Q
    |||||||||| ||||||||||| || ||||||| ||||| | ||||||||||||||||||||||||| ||||| ||||||||| |||     ||||||||    
T  55478108 aaggaaaattctatggtgaagtcatgagaatgatttttttggtgaagttaacactataacatcaaaaatgtaacgagtaacactccactgtttgtttgta 55478009  T
Q  340 caatgacattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    ||||||||| ||||||||| || |||||||||||||||||||||    
T  55478008 caatgacatcaaaagttcagtcctcatagtatcatcaattcatc 55477965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 236 - 383
Target Start/End: Complemental strand, 29584419 - 29584274
Alignment:
Q  236 ataaaataaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtt 335  Q
    |||||| ||||||||||| |||||||||||  |  |||||||||||  | ||||||||||||||||||||||||| |||  ||||||||||| || ||||    
T  29584419 ataaaaaaaaggaaaattctatggtgaagtcgtgggaatgacttttctggtgaagttaacactataacatcaaaagtgt--tgagtaacacctcactgtt 29584322  T
Q  336 tgtacaatgacattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    ||||||||| ||| ||||||||| || |||||||||||||||||||||    
T  29584321 tgtacaatggcatcaaaagttcagtcttcatagtatcatcaattcatc 29584274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 248 - 383
Target Start/End: Original strand, 17173292 - 17173427
Alignment:
Q  248 aaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgaca 347  Q
    |||||| |||||||||||||  | ||||||||||  ||||||||||||| ||||| ||||||| |||  |||||||||||||| ||||||||||||||||    
T  17173292 aaaattctatggtgaagttacgaaaatgacttttctgatgaagttaacattataatatcaaaaatgttgtgagtaacaccccactgtttgtacaatgaca 17173391  T
Q  348 ttaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    | ||||||||||||  ||||||||||| ||||||||    
T  17173392 tcaaaagttcaatctccatagtatcattaattcatc 17173427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 244 - 379
Target Start/End: Complemental strand, 32912793 - 32912658
Alignment:
Q  244 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaat 343  Q
    |||||||||| ||||||||||| |||||||||||||||| | ||||||||||||||||||||||||| ||||||||||||||||| | | |||||| |||    
T  32912793 aaggaaaattctatggtgaagtcataagaatgacttttttggtgaagttaacactataacatcaaaaatgtaatgagtaacaccctagtatttgtagaat 32912694  T
Q  344 gacattaaaagttcaatcatcatagtatcatcaatt 379  Q
    || || |||||||||    ||||| |||||||||||    
T  32912693 gatatcaaaagttcagcactcataatatcatcaatt 32912658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 245 - 383
Target Start/End: Original strand, 42199728 - 42199866
Alignment:
Q  245 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatg 344  Q
    ||||||| | ||||||||| | |||||||||| ||||| | ||||||||| ||||||||||||||| |||||||||||| |||||| | |||||| ||||    
T  42199728 aggaaaaatctatggtgaaatcataagaatgatttttttggtgaagttaatactataacatcaaaaatgtaatgagtaataccccattatttgtagaatg 42199827  T
Q  345 acattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    |||| |||||||||  | |||||||||||||||||||||    
T  42199828 acataaaaagttcagccctcatagtatcatcaattcatc 42199866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 248 - 383
Target Start/End: Original strand, 17167715 - 17167850
Alignment:
Q  248 aaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgaca 347  Q
    |||||| |||||||||||||  | ||||||||||  ||||||||||||| ||||| ||||||| |||  |||||||||||||| ||||||||||||||||    
T  17167715 aaaattctatggtgaagttacgaaaatgacttttctgatgaagttaacattataatatcaaaaatgttgtgagtaacaccccactgtttgtacaatgaca 17167814  T
Q  348 ttaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    | ||||||||| ||  ||||||||||| ||||||||    
T  17167815 tcaaaagttcattctccatagtatcattaattcatc 17167850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 248 - 383
Target Start/End: Complemental strand, 34948306 - 34948171
Alignment:
Q  248 aaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgaca 347  Q
    |||||||||||||||||| || ||||||||||||  |  |||||||||||||||||||||||| |||  |||||||||||||| |||||||| | || ||    
T  34948306 aaaattttatggtgaagtcatgagaatgacttttctggcgaagttaacactataacatcaaaagtgttgtgagtaacaccccactgtttgtaaagtggca 34948207  T
Q  348 ttaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    | ||||||||| || ||||| |||||||||||||||    
T  34948206 tcaaaagttcagtcctcataatatcatcaattcatc 34948171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 246 - 383
Target Start/End: Complemental strand, 19440860 - 19440722
Alignment:
Q  246 ggaaaattttatggtgaa-gttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatg 344  Q
    |||||||| ||||||||| || || ||||||||||||| | ||| ||||||||||||||||||||| |||||||| |||||| |||  ||||||||||||    
T  19440860 ggaaaattctatggtgaaagtcatgagaatgacttttttggtgatgttaacactataacatcaaaaatgtaatgattaacactccaccgtttgtacaatg 19440761  T
Q  345 acattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
     ||| ||||||||| || ||||| |||||||||||||||    
T  19440760 gcatcaaaagttcagtcctcataatatcatcaattcatc 19440722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 243 - 382
Target Start/End: Original strand, 50764732 - 50764866
Alignment:
Q  243 aaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaa 342  Q
    ||||||||||||||||   |||| || ||||| ||||||| ||||||||||||||||  ||||||||| |||  |||||||||||||| |||||||||      
T  50764732 aaaggaaaattttatg---aagtcatgagaataacttttttgatgaagttaacacta--acatcaaaagtgttgtgagtaacaccccactgtttgtacgg 50764826  T
Q  343 tgacattaaaagttcaatcatcatagtatcatcaattcat 382  Q
    |||||| |||||||||||| ||||||||||||||||||||    
T  50764827 tgacatcaaaagttcaatcctcatagtatcatcaattcat 50764866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 246 - 383
Target Start/End: Complemental strand, 28003197 - 28003060
Alignment:
Q  246 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 345  Q
    |||||||| ||||||||||| || ||||||||||||  | |||||| ||||||||| |||||||| |||| | ||||  || ||| |||||||||| |||    
T  28003197 ggaaaattctatggtgaagtcatgagaatgacttttctggtgaagtcaacactatagcatcaaaagtgtagtcagtagtactccactgtttgtacagtga 28003098  T
Q  346 cattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    ||| ||||||||| ||||||||||||||||||||||||    
T  28003097 catcaaaagttcagtcatcatagtatcatcaattcatc 28003060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 246 - 379
Target Start/End: Original strand, 39397918 - 39398051
Alignment:
Q  246 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 345  Q
    |||||||| ||||||||||| || ||||||||||||  | |||||||||||||||||||| |||| |||  |||||||||||||| |||||||||| |||    
T  39397918 ggaaaattctatggtgaagtcattagaatgacttttatggtgaagttaacactataacattaaaagtgttgtgagtaacaccccattgtttgtacagtga 39398017  T
Q  346 cattaaaagttcaatcatcatagtatcatcaatt 379  Q
    ||| ||||||||| || ||  |||||||||||||    
T  39398018 catcaaaagttcagtcttctcagtatcatcaatt 39398051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 248 - 383
Target Start/End: Original strand, 27396618 - 27396753
Alignment:
Q  248 aaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgaca 347  Q
    |||||| ||||||||||| || ||||||||||||  | ||||||||||| |||| ||| |||| ||| ||||||||||||| | ||||||||||||||||    
T  27396618 aaaattctatggtgaagtcatgagaatgacttttctggtgaagttaacattatagcattaaaagtgttatgagtaacaccctactgtttgtacaatgaca 27396717  T
Q  348 ttaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    | |||||||   || |||||||||||||||||||||    
T  27396718 tcaaaagtttcgtcctcatagtatcatcaattcatc 27396753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 248 - 382
Target Start/End: Complemental strand, 36493897 - 36493763
Alignment:
Q  248 aaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgaca 347  Q
    |||||| ||||||||||| || | ||| ||||||| | ||||||||| |||||| |||||||| | || |||||||||||||| |||||||||| |||||    
T  36493897 aaaattctatggtgaagtcatgaaaataacttttttggtgaagttaatactataccatcaaaaatatagtgagtaacaccccattgtttgtacagtgaca 36493798  T
Q  348 ttaaaagttcaatcatcatagtatcatcaattcat 382  Q
    | ||||||||| ||  |||||||||||||||||||    
T  36493797 tcaaaagttcagtccccatagtatcatcaattcat 36493763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 245 - 374
Target Start/End: Original strand, 37287732 - 37287862
Alignment:
Q  245 aggaaaattttatggtgaagttataagaatgactttttg-gatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaat 343  Q
    ||||||||| ||||||||||| || |||||||||||||  | | ||||||||||||||||||||||| |||  |||||||||||||| |||||||||| |    
T  37287732 aggaaaattctatggtgaagtaatgagaatgactttttttggtaaagttaacactataacatcaaaagtgttgtgagtaacaccccactgtttgtacagt 37287831  T
Q  344 gacattaaaagttcaatcatcatagtatcat 374  Q
    | ||| |||||||||||| ||||| ||||||    
T  37287832 ggcatcaaaagttcaatcctcataatatcat 37287862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 248 - 376
Target Start/End: Original strand, 47253751 - 47253878
Alignment:
Q  248 aaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgaca 347  Q
    |||||| ||||||||||| || ||||||||||||| | |||||||||||||||| |||||||| |||  ||||||||| |||| ||||| |||| |||||    
T  47253751 aaaattctatggtgaagtcatgagaatgacttttttggtgaagttaacactatatcatcaaaagtgttgtgagtaaca-cccattgtttatacagtgaca 47253849  T
Q  348 ttaaaagttcaatcatcatagtatcatca 376  Q
    | ||||||||| || ||||||||||||||    
T  47253850 tcaaaagttcagtcctcatagtatcatca 47253878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 235 - 373
Target Start/End: Original strand, 3042600 - 3042738
Alignment:
Q  235 aataaaataaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgt 334  Q
    ||||||| ||||||||||| ||||||||| | |||| ||||| ||||| | ||||||||||||||||||||  ||| |||||||||||| ||||||  ||    
T  3042600 aataaaaaaaaggaaaattctatggtgaaatcataaaaatgatttttttggtgaagttaacactataacatacaaaatgtaatgagtaataccccaccgt 3042699  T
Q  335 ttgtacaatgacattaaaagttcaatcatcatagtatca 373  Q
    || ||||||||||| |||| |||| |||| | |||||||    
T  3042700 ttatacaatgacatcaaaaattcagtcattagagtatca 3042738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 237 - 383
Target Start/End: Original strand, 4597984 - 4598129
Alignment:
Q  237 taaaataaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgttt 336  Q
    ||||| ||| ||||||||||||||||||| || ||||||||||||  | ||||||||||||||||||||| ||| |||  |||||||||||||| |||||    
T  4597984 taaaagaaatgaaaattttatggtgaagtcattagaatgacttttctggtgaagttaacactataacatc-aaagtgttgtgagtaacaccccactgttt 4598082  T
Q  337 gtacaatgacattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    ||||| || ||| ||||||||| ||  | |||  |||||||||||||    
T  4598083 gtacagtggcatcaaaagttcagtccccttagactcatcaattcatc 4598129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 246 - 383
Target Start/End: Original strand, 49375966 - 49376104
Alignment:
Q  246 ggaaaattttatggtgaagttataagaatgactttttg-gatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatg 344  Q
    |||||||| || |||||||| || |||||||||||||  | ||||||||||| |||| |||||||| |||  |||||||||||||| || ||||||| ||    
T  49375966 ggaaaattctacggtgaagtcatgagaatgactttttctggtgaagttaacattatagcatcaaaagtgtcgtgagtaacaccccactgcttgtacagtg 49376065  T
Q  345 acattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
     ||| ||||||||| || |||||||||||||||||||||    
T  49376066 gcatcaaaagttcagtcttcatagtatcatcaattcatc 49376104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 242 - 383
Target Start/End: Original strand, 50697238 - 50697378
Alignment:
Q  242 taaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtaca 341  Q
    |||||||||||| || |||||||| |||| ||||| |||||   |||||| ||||||||||||| |||| | ||| ||||||||||| |  |||||||||    
T  50697238 taaaggaaaattctacggtgaagtcataaaaatgatttttttagtgaagtaaacactataacataaaaaatataacgagtaacaccctaccgtttgtaca 50697337  T
Q  342 atgacattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    ||||||| |||||||||||  || ||||||||||||||||||    
T  50697338 atgacatcaaaagttcaattctc-tagtatcatcaattcatc 50697378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 243 - 382
Target Start/End: Complemental strand, 35021249 - 35021110
Alignment:
Q  243 aaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaa 342  Q
    ||||||||||| ||||||||||| || | ||||||||||  | ||||||||||| ||||||||||||| |||| |||||||||| ||| ||||||||||     
T  35021249 aaaggaaaattctatggtgaagtcatgaaaatgacttttctggtgaagttaacattataacatcaaaaatgtagtgagtaacacaccactgtttgtacat 35021150  T
Q  343 tgacattaaaagttcaatcatcatagtatcatcaattcat 382  Q
    || | | |||||||   || || |||||||||||||||||    
T  35021149 tggcgtcaaaagtttcgtcctcgtagtatcatcaattcat 35021110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 246 - 376
Target Start/End: Original strand, 7703517 - 7703647
Alignment:
Q  246 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 345  Q
    |||||||| |||| | |||| || ||||||||||||  | ||||||||||||||||||||||||| |||  | |||||||||||| |||||||||  |||    
T  7703517 ggaaaattctatgttaaagtcatgagaatgacttttctggtgaagttaacactataacatcaaaagtgttgtcagtaacaccccactgtttgtacggtga 7703616  T
Q  346 cattaaaagttcaatcatcatagtatcatca 376  Q
    ||| ||||||||| ||  |||||||||||||    
T  7703617 catcaaaagttcagtccccatagtatcatca 7703647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 243 - 348
Target Start/End: Original strand, 4205113 - 4205218
Alignment:
Q  243 aaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaa 342  Q
    ||||||||||| ||||||||||| |  | ||||||||||  ||||||||||||||||||| ||||||| |||  ||| |||||||||| |||||||||||    
T  4205113 aaaggaaaattctatggtgaagtcaggaaaatgacttttctgatgaagttaacactataatatcaaaaatgttctgaataacaccccactgtttgtacaa 4205212  T
Q  343 tgacat 348  Q
    ||||||    
T  4205213 tgacat 4205218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 246 - 379
Target Start/End: Complemental strand, 55241315 - 55241182
Alignment:
Q  246 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 345  Q
    |||||||| ||||||||||| || ||||||||||||    ||||||||| ||||||  |||||||||||   ||||||||||||| |||||||||| ||     
T  55241315 ggaaaattctatggtgaagtcatgagaatgacttttctagtgaagttaatactatattatcaaaattgttgcgagtaacaccccactgtttgtacagtgg 55241216  T
Q  346 cattaaaagttcaatcatcatagtatcatcaatt 379  Q
    ||| ||||||||| ||  ||||||||||||||||    
T  55241215 catcaaaagttcagtccccatagtatcatcaatt 55241182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 243 - 383
Target Start/End: Original strand, 38011851 - 38011991
Alignment:
Q  243 aaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaa 342  Q
    ||||||||||| ||||||||| | || ||||||||||||  | |||||| |||||||||||||||||| |||| ||| || ||||||| |||||||||      
T  38011851 aaaggaaaattctatggtgaaatcatgagaatgacttttctggtgaagtcaacactataacatcaaaagtgtagtgaatagcaccccactgtttgtacgg 38011950  T
Q  343 tgacattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    || ||| ||||||||| ||  |||| ||| |||||||||||    
T  38011951 tgccatcaaaagttcagtccccataatattatcaattcatc 38011991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 288 - 383
Target Start/End: Original strand, 23761114 - 23761209
Alignment:
Q  288 aagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    ||||||||||||||||||||||| |||  ||||||||||| || |||||||| | |||||| ||||||||| ||  ||||||||||||||||||||    
T  23761114 aagttaacactataacatcaaaagtgttgtgagtaacacctcactgtttgtatagtgacatcaaaagttcagtccccatagtatcatcaattcatc 23761209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 241 - 376
Target Start/End: Complemental strand, 30002840 - 30002705
Alignment:
Q  241 ataaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtac 340  Q
    ||||||||||| | ||||||||||| || | ||||| ||||  | ||||||||||||| || |||||||| |||  ||||||||||| || |||||||||    
T  30002840 ataaaggaaaactctatggtgaagtcattaaaatgatttttctggtgaagttaacactgtagcatcaaaagtgttgtgagtaacacctcactgtttgtac 30002741  T
Q  341 aatgacattaaaagttcaatcatcatagtatcatca 376  Q
    | |||||| ||||||||| || || |||||||||||    
T  30002740 agtgacatcaaaagttcagtcttcttagtatcatca 30002705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 244 - 330
Target Start/End: Original strand, 4396324 - 4396410
Alignment:
Q  244 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacacccca 330  Q
    |||||||||| ||| ||||||| |||| |||||||||||   |||||||||||||||||||| |||| |||||||||||||||||||    
T  4396324 aaggaaaattctatagtgaagtcataaaaatgacttttttagtgaagttaacactataacataaaaaatgtaatgagtaacacccca 4396410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 249 - 379
Target Start/End: Original strand, 6864038 - 6864168
Alignment:
Q  249 aaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacat 348  Q
    ||||| |||||||| || || ||||||||||||| | |||||||| |||||||||||||||| | |||||| ||||| || | | ||||||||||  |||    
T  6864038 aaattgtatggtgatgtcatgagaatgacttttttggtgaagttatcactataacatcaaaaatttaatgaataacatccaactttttgtacaatagcat 6864137  T
Q  349 taaaagttcaatcatcatagtatcatcaatt 379  Q
     |||||| || || |||||||||||||||||    
T  6864138 caaaagtccagtcctcatagtatcatcaatt 6864168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 249 - 383
Target Start/End: Original strand, 32592096 - 32592230
Alignment:
Q  249 aaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacat 348  Q
    ||||||||| ||||||| || | ||||||||||| |||||||||||||||| |  ||||||| |||   ||||||||| ||| |||||||| | ||||||    
T  32592096 aaattttattgtgaagtcattataatgacttttttgatgaagttaacactacagtatcaaaagtgttgagagtaacactccactgtttgtatagtgacat 32592195  T
Q  349 taaaagttcaatcatcatagtatcatcaattcatc 383  Q
     ||||||||| ||  | ||||||||||||||||||    
T  32592196 caaaagttcagtccccttagtatcatcaattcatc 32592230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 241 - 338
Target Start/End: Original strand, 32579439 - 32579536
Alignment:
Q  241 ataaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgt 338  Q
    |||||||||||||||||||||||||| | ||||||||||||  | |||||| |||| ||||||||||||| || | |||||| ||||||| |||||||    
T  32579439 ataaaggaaaattttatggtgaagttctgagaatgacttttctggtgaagtcaacattataacatcaaaagtgcagtgagtagcaccccagtgtttgt 32579536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 271 - 383
Target Start/End: Complemental strand, 54499425 - 54499312
Alignment:
Q  271 gaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtac-aatgacattaaaagttcaatcatcatagt 369  Q
    |||||||||||  | |||||||||||||||| |||||||| |||  ||||||||||||||  |||||||| |||||||| ||||||||| ||   |||||    
T  54499425 gaatgacttttctggtgaagttaacactatagcatcaaaagtgttgtgagtaacaccccaccgtttgtactaatgacatcaaaagttcagtctctatagt 54499326  T
Q  370 atcatcaattcatc 383  Q
    ||||||||||||||    
T  54499325 atcatcaattcatc 54499312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 244 - 383
Target Start/End: Original strand, 9139245 - 9139382
Alignment:
Q  244 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaat 343  Q
    |||||||||| ||||||||||| || | | ||||||||| | ||||||||||  |||| ||| |||| |  | ||||||||||||||  ||||||||| |    
T  9139245 aaggaaaattctatggtgaagtcatgaaattgacttttttggtgaagttaacgttatagcataaaaaat--agtgagtaacaccccaccgtttgtacagt 9139342  T
Q  344 gacattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    ||||| ||||||||||||  |||||||||||||| |||||    
T  9139343 gacataaaaagttcaatccccatagtatcatcaactcatc 9139382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 246 - 330
Target Start/End: Original strand, 53124287 - 53124371
Alignment:
Q  246 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacacccca 330  Q
    |||||||| |||| |||||| || | ||||| ||||| | ||||||||||||||||||||||||| | |||||||||||||||||    
T  53124287 ggaaaattatatgatgaagtcattaaaatgatttttttggtgaagttaacactataacatcaaaaatataatgagtaacacccca 53124371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 245 - 376
Target Start/End: Complemental strand, 35025800 - 35025669
Alignment:
Q  245 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatg 344  Q
    ||||||||| |||| |||||| || | ||||| ||||  | |||||| ||||||||| |||||||| |||| |||||| ||||||| ||||| |||  ||    
T  35025800 aggaaaattctatgctgaagtcatgaaaatgatttttctggtgaagtcaacactatagcatcaaaagtgtagtgagtagcaccccactgtttatacgttg 35025701  T
Q  345 acattaaaagttcaatcatcatagtatcatca 376  Q
    |||| ||||||||| || || |||||||||||    
T  35025700 acatcaaaagttcagtcctcgtagtatcatca 35025669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 260 - 382
Target Start/End: Complemental strand, 5048162 - 5048040
Alignment:
Q  260 tgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagttcaa 359  Q
    ||||||||| ||||||| ||||  | |||||| ||| |||||||||||||| |||| ||||||  ||| || ||||||||| |||| || |||||||||     
T  5048162 tgaagttatgagaatgatttttctggtgaagtcaactctataacatcaaaagtgtagtgagtaggaccacactgtttgtacgatgatatcaaaagttcag 5048063  T
Q  360 tcatcatagtatcatcaattcat 382  Q
    |   |||||||||||||||||||    
T  5048062 ttcccatagtatcatcaattcat 5048040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 284 - 383
Target Start/End: Complemental strand, 46888330 - 46888231
Alignment:
Q  284 gatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    ||||||||||| |||||||||||||||||||| ||||||| |||||| | ||||||||  | ||| ||||||||| ||  |||| |||| | ||||||||    
T  46888330 gatgaagttaatactataacatcaaaattgtagtgagtaataccccactatttgtacagcggcatcaaaagttcagtccccatactatcgttaattcatc 46888231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 247 - 357
Target Start/End: Original strand, 37775670 - 37775780
Alignment:
Q  247 gaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgac 346  Q
    ||||||| || |||||||| || | ||||| ||||| | |||||||| |||||||| || |||| |||  |||||||||||||| |||||||||| || |    
T  37775670 gaaaattctacggtgaagtcattaaaatgatttttttggtgaagttagcactataatattaaaaatgttgtgagtaacaccccactgtttgtacagtggc 37775769  T
Q  347 attaaaagttc 357  Q
    || ||||||||    
T  37775770 atcaaaagttc 37775780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 307 - 383
Target Start/End: Complemental strand, 4934353 - 4934276
Alignment:
Q  307 aaaattgtaatgagtaacaccccaat-gtttgtacaatgacattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    |||| |||| ||||||||||||| || ||||||||| || ||| |||||||||||| |||||||||||||| ||||||    
T  4934353 aaaaatgtagtgagtaacacccccattgtttgtacactggcatcaaaagttcaatcctcatagtatcatcatttcatc 4934276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 248 - 304
Target Start/End: Original strand, 52516599 - 52516655
Alignment:
Q  248 aaaattttatggtgaagttataagaatgactttttggatgaagttaacactataaca 304  Q
    |||||||||||||||||| || ||||||||||||  | |||||||||||||||||||    
T  52516599 aaaattttatggtgaagtcatgagaatgacttttatggtgaagttaacactataaca 52516655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 244 - 310
Target Start/End: Original strand, 17272009 - 17272075
Alignment:
Q  244 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaa 310  Q
    |||||||||| |||||||||||  |  |||||||||||  | |||||||||||||||||||||||||    
T  17272009 aaggaaaattctatggtgaagtcgtgggaatgacttttctggtgaagttaacactataacatcaaaa 17272075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 248 - 383
Target Start/End: Original strand, 33341397 - 33341535
Alignment:
Q  248 aaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattg----taatgagtaacaccccaatgtttgtacaat 343  Q
    |||||| ||| ||||||| || ||||||| ||||  | |||| ||||||||||| |||||||||||    |   ||| ||||||||| |||||||||| |    
T  33341397 aaaattctatagtgaagtcatgagaatgatttttctggtgaaattaacactatatcatcaaaattgattgttgcgaggaacaccccactgtttgtacagt 33341496  T
Q  344 gacattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    | ||| ||||||||| ||  ||||||||||||||||||||    
T  33341497 ggcatcaaaagttcagtcc-catagtatcatcaattcatc 33341535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 328
Target Start/End: Complemental strand, 7152319 - 7152235
Alignment:
Q  244 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccc 328  Q
    |||||||||| ||||||||||| ||   ||||||||||  | | ||||||||| ||||||||||||| | || ||||||||||||    
T  7152319 aaggaaaattctatggtgaagtcatgctaatgacttttctggtaaagttaacattataacatcaaaagtatagtgagtaacaccc 7152235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 294
Target Start/End: Complemental strand, 52195687 - 52195645
Alignment:
Q  252 ttttatggtgaagttataagaatgactttttggatgaagttaa 294  Q
    ||||||||||||||||| ||||||||||||  |||||||||||    
T  52195687 ttttatggtgaagttatgagaatgacttttctgatgaagttaa 52195645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 335
Target Start/End: Complemental strand, 23518473 - 23518425
Alignment:
Q  287 gaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtt 335  Q
    ||||||||||||||||||| |||| |||| ||| |||||||||| ||||    
T  23518473 gaagttaacactataacattaaaactgtagtgactaacaccccactgtt 23518425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 246 - 294
Target Start/End: Original strand, 52102915 - 52102963
Alignment:
Q  246 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaa 294  Q
    |||||||||||| |||||| | ||||||||||||||| | |||||||||    
T  52102915 ggaaaattttattgtgaagatttaagaatgacttttttggtgaagttaa 52102963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 98; Significance: 4e-48; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 236 - 377
Target Start/End: Original strand, 32267020 - 32267161
Alignment:
Q  236 ataaaataaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtt 335  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||   ||||||||||| ||||||||||||| ||||||||||||||||||| ||||    
T  32267020 ataaaataaaggaaaattttatggtgaagtcataagaatgactttttttgtgaagttaacaatataacatcaaaaatgtaatgagtaacaccccactgtt 32267119  T
Q  336 tgtacaatgacattaaaagttcaatcatcatagtatcatcaa 377  Q
    ||||||||||||| ||||||||| || ||||| |||||||||    
T  32267120 tgtacaatgacatcaaaagttcactcctcatattatcatcaa 32267161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 244 - 383
Target Start/End: Original strand, 15382927 - 15383066
Alignment:
Q  244 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaat 343  Q
    |||||||||| |||||||||||||||| ||||||||||| | |||| |||||||||||||||||||| |||||||||||||| ||||  |||||||||||    
T  15382927 aaggaaaattctatggtgaagttataaaaatgacttttttggtgaaattaacactataacatcaaaaatgtaatgagtaacatcccaccgtttgtacaat 15383026  T
Q  344 gacattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    | ||| ||||||||| ||||| ||||||||||||||||||    
T  15383027 gtcatcaaaagttcagtcatcgtagtatcatcaattcatc 15383066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 247 - 383
Target Start/End: Original strand, 10922724 - 10922860
Alignment:
Q  247 gaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgac 346  Q
    ||||||||||||||||| | || ||||||| ||||| | |||||||||||||||||||| |||| |||||||||||| |||||| |||||||||||||||    
T  10922724 gaaaattttatggtgaaatcatgagaatgatttttttggtgaagttaacactataacataaaaaatgtaatgagtaagaccccactgtttgtacaatgac 10922823  T
Q  347 attaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    || |||||||||||| ||||||||||||||| |||||    
T  10922824 atcaaaagttcaatcctcatagtatcatcaactcatc 10922860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 256 - 383
Target Start/End: Complemental strand, 28564951 - 28564824
Alignment:
Q  256 atggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagt 355  Q
    ||||||||||||| | ||||| ||||| ||||||||||||||||||||||||||| ||||||||||||||||  | ||||||||||||||||| ||||||    
T  28564951 atggtgaagttatgaaaatgatttttttgatgaagttaacactataacatcaaaaatgtaatgagtaacaccttactgtttgtacaatgacatcaaaagt 28564852  T
Q  356 tcaatcatcatagtatcatcaattcatc 383  Q
    ||| || |||||||||||||||||||||    
T  28564851 tcagtcctcatagtatcatcaattcatc 28564824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 245 - 383
Target Start/End: Original strand, 18422646 - 18422784
Alignment:
Q  245 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatg 344  Q
    ||||||||| ||||||||||| |||| ||||||||||| | ||||||||||||||||||||||||| | ||| |||||||||||||  ||||||||||||    
T  18422646 aggaaaattctatggtgaagtcataaaaatgacttttttggtgaagttaacactataacatcaaaaatataacgagtaacaccccaccgtttgtacaatg 18422745  T
Q  345 acattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    |||| ||||||||| || ||||| |||||||||||||||    
T  18422746 acatcaaaagttcagtcctcataatatcatcaattcatc 18422784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 245 - 383
Target Start/End: Original strand, 30254419 - 30254556
Alignment:
Q  245 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatg 344  Q
    ||||||||| |||||||||||||||||||||||||||| | ||||||||||| ||||||||||||| |||||||||||| | | || |||||||||||||    
T  30254419 aggaaaattctatggtgaagttataagaatgacttttttgttgaagttaacaatataacatcaaaaatgtaatgagtaata-cacactgtttgtacaatg 30254517  T
Q  345 acattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    |||| ||||||||| || ||| |||||||||||||||||    
T  30254518 acatcaaaagttcagtcctcaaagtatcatcaattcatc 30254556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 245 - 383
Target Start/End: Complemental strand, 19899950 - 19899812
Alignment:
Q  245 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatg 344  Q
    ||||||||| ||||||||||| |||| ||||| ||||| | ||||||||||||||||||||||||| ||||| |||||||||| || |||||||| ||||    
T  19899950 aggaaaattctatggtgaagtcataataatgatttttttggtgaagttaacactataacatcaaaaatgtaacgagtaacacctcactgtttgtagaatg 19899851  T
Q  345 acattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
     ||| |||||||||| | |||||||||||||||||||||    
T  19899850 gcatcaaaagttcaaccctcatagtatcatcaattcatc 19899812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 243 - 383
Target Start/End: Complemental strand, 37619079 - 37618935
Alignment:
Q  243 aaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagt--aacaccccaatgtttgtac 340  Q
    ||||||||||| |||||||||||||||||||||||||||| | ||||||||||||||||||||||||| | ||||||||  ||||||||| ||||||||     
T  37619079 aaaggaaaattctatggtgaagttataagaatgacttttttggtgaagttaacactataacatcaaaaatttaatgagtaaaacaccccactgtttgtaa 37618980  T
Q  341 aatgacattaaaagttcaatcatcatag--tatcatcaattcatc 383  Q
    |||||||| ||||||||| |  ||||||  |||||||||||||||    
T  37618979 aatgacatcaaaagttcagttctcatagtatatcatcaattcatc 37618935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 248 - 383
Target Start/End: Original strand, 15752027 - 15752162
Alignment:
Q  248 aaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgaca 347  Q
    |||||| ||||||||||| || ||||||||||||| | |||||||||||||||||||| |||| | || ||||||||||| || ||||||||||||| ||    
T  15752027 aaaattctatggtgaagtcatgagaatgacttttttggtgaagttaacactataacataaaaaatatagtgagtaacacctcactgtttgtacaatggca 15752126  T
Q  348 ttaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    | ||||||||| || |||||||||||||||||||||    
T  15752127 tcaaaagttcagtcctcatagtatcatcaattcatc 15752162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 245 - 383
Target Start/End: Original strand, 2959743 - 2959881
Alignment:
Q  245 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatg 344  Q
    ||||||||| ||||||||||| || | ||||||||||  ||||||||||||||||||||||||||| |||| | ||||||| |||| |||||||||| ||    
T  2959743 aggaaaattctatggtgaagtcatgaaaatgacttttctgatgaagttaacactataacatcaaaactgtagtaagtaacatcccactgtttgtacagtg 2959842  T
Q  345 acattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    |||| ||||||||| || ||||||| |||||||||||||    
T  2959843 acatcaaaagttcagtcctcatagtgtcatcaattcatc 2959881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 272 - 383
Target Start/End: Complemental strand, 9903208 - 9903097
Alignment:
Q  272 aatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagttcaatcatcatagtat 371  Q
    ||||||||||| ||||||||||||||||||||||||||| |||| |||||||||||||  |||||||||| |||||| ||||||||||||  |||| |||    
T  9903208 aatgacttttttgatgaagttaacactataacatcaaaactgtagtgagtaacaccccgctgtttgtacagtgacatcaaaagttcaatccacatactat 9903109  T
Q  372 catcaattcatc 383  Q
    ||||||||||||    
T  9903108 catcaattcatc 9903097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 246 - 383
Target Start/End: Original strand, 23999343 - 23999480
Alignment:
Q  246 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 345  Q
    |||||||||||||||||||| |||||||||| ||||| | |||||||||||||| ||||| |||| | ||| ||||||||||||| | |||||| |||||    
T  23999343 ggaaaattttatggtgaagtcataagaatgatttttttggtgaagttaacactacaacataaaaaatataacgagtaacaccccactatttgtagaatga 23999442  T
Q  346 cattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    ||| |||||||||  | ||||||||| |||||||||||    
T  23999443 catcaaaagttcagccctcatagtattatcaattcatc 23999480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 246 - 383
Target Start/End: Complemental strand, 30327132 - 30326995
Alignment:
Q  246 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 345  Q
    |||||||| ||| ||||||| |||| |||||||||||   |||| |||||||||||||||||||| |||||||||||| |||| |  |||||||||||      
T  30327132 ggaaaattctatagtgaagtcataaaaatgactttttttgtgaatttaacactataacatcaaaaatgtaatgagtaatacccaaccgtttgtacaatag 30327033  T
Q  346 cattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    ||| ||||||||| ||||||||||||||||||||||||    
T  30327032 catcaaaagttcagtcatcatagtatcatcaattcatc 30326995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 243 - 383
Target Start/End: Complemental strand, 34012560 - 34012420
Alignment:
Q  243 aaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaa 342  Q
    ||||||||||| ||||||||||| || | |||||| |||  ||||||||||||||||||||||||| | |||| |||||||||| ||| |||||||| |     
T  34012560 aaaggaaaattctatggtgaagtcatgaaaatgacgtttatgatgaagttaacactataacatcaacactgtagtgagtaacactccactgtttgtaaag 34012461  T
Q  343 tgacattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    || ||| ||||||||| |||||||| |||||||||||||||    
T  34012460 tggcatcaaaagttcagtcatcatactatcatcaattcatc 34012420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 244 - 382
Target Start/End: Original strand, 16415639 - 16415778
Alignment:
Q  244 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccc-caatgtttgtacaa 342  Q
    |||||||||| || |||||||| || ||||||||||||  | |||||||||||||||| |||||||| |||| ||||||||||||  ||||||||||||     
T  16415639 aaggaaaattctaaggtgaagtcatgagaatgacttttctggtgaagttaacactatagcatcaaaagtgtagtgagtaacaccctaaatgtttgtacag 16415738  T
Q  343 tgacattaaaagttcaatcatcatagtatcatcaattcat 382  Q
    || ||| |||||||||  ||||||||||||||||||||||    
T  16415739 tggcatcaaaagttcagccatcatagtatcatcaattcat 16415778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 246 - 383
Target Start/End: Original strand, 38823210 - 38823347
Alignment:
Q  246 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 345  Q
    |||||||| ||||||||||| || ||||||||||||  | | |||||||||||||| ||||||||||||   ||||||||||||| | |||||||| ||     
T  38823210 ggaaaattctatggtgaagtcatgagaatgacttttctggttaagttaacactatagcatcaaaattgttgcgagtaacaccccactatttgtacagtgt 38823309  T
Q  346 cattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    ||| ||||||||||||  ||||||||||||||||||||    
T  38823310 catcaaaagttcaatccccatagtatcatcaattcatc 38823347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 286 - 383
Target Start/End: Original strand, 51128895 - 51128992
Alignment:
Q  286 tgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    |||||||||||||||||||| |||| ||||||||||||||| |||  |||||||||||||||| ||||||||| |||| |||||||||||||||||||    
T  51128895 tgaagttaacactataacataaaaaatgtaatgagtaacactccaccgtttgtacaatgacatcaaaagttcagtcattatagtatcatcaattcatc 51128992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 243 - 383
Target Start/End: Complemental strand, 11742533 - 11742394
Alignment:
Q  243 aaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaa 342  Q
    ||||||||||||||| |||||||||| ||||||||||||  | ||||||||||||||||  ||||||| |||  | |||||||||||| ||||||||||     
T  11742533 aaaggaaaattttatcgtgaagttatgagaatgacttttctggtgaagttaacactatattatcaaaagtgttgtaagtaacaccccactgtttgtacag 11742434  T
Q  343 tgacattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    |||||| ||||||||| ||  |||| |||||||||||||||    
T  11742433 tgacatcaaaagttcagtc-ccataatatcatcaattcatc 11742394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 235 - 379
Target Start/End: Complemental strand, 27763500 - 27763358
Alignment:
Q  235 aataaaataaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgt 334  Q
    |||||||  ||| |||| |||||||| ||||||||||||||| ||||| | ||||||||||||||||||||||||| |||||||||||||| ||||  ||    
T  27763500 aataaaaataagaaaaaatttatggtaaagttataagaatgatttttttg-tgaagttaacactataacatcaaaaatgtaatgagtaaca-cccatagt 27763403  T
Q  335 ttgtacaatgacattaaaagttcaatcatcatagtatcatcaatt 379  Q
    ||||| |||||||| |||||| ||  | |||||||||||||||||    
T  27763402 ttgtagaatgacatcaaaagtccagccctcatagtatcatcaatt 27763358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 243 - 383
Target Start/End: Original strand, 48620630 - 48620770
Alignment:
Q  243 aaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaa 342  Q
    ||||||||||| |||| ||||||||| | ||||||||||    ||||||||||| ||||||||||||| |||  |||||||||||||| ||||||||||     
T  48620630 aaaggaaaattctatgttgaagttattaaaatgacttttcttgtgaagttaacaatataacatcaaaagtgttgtgagtaacaccccactgtttgtacag 48620729  T
Q  343 tgacattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    |||||| ||||||||| ||  | ||||||||||||||||||    
T  48620730 tgacatcaaaagttcagtccccttagtatcatcaattcatc 48620770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 256 - 379
Target Start/End: Original strand, 37451292 - 37451414
Alignment:
Q  256 atggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagt 355  Q
    |||||||||| |||| ||||||||||| | | ||||||||||||||||||||||| |||||| |||||||||| |  |||||||||||||||| ||||||    
T  37451292 atggtgaagtcataaaaatgacttttttggtaaagttaacactataacatcaaaaatgtaataagtaacaccctaccgtttgtacaatgacatcaaaagt 37451391  T
Q  356 tcaatcatcatagtatcatcaatt 379  Q
    ||| || || ||||||||||||||    
T  37451392 tcagtcctc-tagtatcatcaatt 37451414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 246 - 383
Target Start/End: Original strand, 3309144 - 3309280
Alignment:
Q  246 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 345  Q
    |||||||| |||||| |||| || ||||||||||||  | | ||||||||||||||||||||||| |||  ||||||||| |||| |||||||||| ||     
T  3309144 ggaaaattctatggtaaagtcatgagaatgacttttctggtaaagttaacactataacatcaaaagtgttgtgagtaaca-cccactgtttgtacagtgg 3309242  T
Q  346 cattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
     || |||||||||||| |||||||||||||||||||||    
T  3309243 tatcaaaagttcaatcttcatagtatcatcaattcatc 3309280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 245 - 345
Target Start/End: Original strand, 30254853 - 30254952
Alignment:
Q  245 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatg 344  Q
    ||||||||| ||||||||||| |||| ||||||||||| ||||||||||||||||||||||||||| |||||||  ||||| |||| |||||||||||||    
T  30254853 aggaaaattctatggtgaagtcataataatgacttttttgatgaagttaacactataacatcaaaaatgtaatggataaca-cccactgtttgtacaatg 30254951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 248 - 383
Target Start/End: Original strand, 28769651 - 28769785
Alignment:
Q  248 aaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgaca 347  Q
    |||||| ||||||||||| |||| ||| |||||||   ||||||||||||||| ||||||||| |||||||||||||| ||||  |||||||||||| ||    
T  28769651 aaaattctatggtgaagtcataaaaataactttttttgtgaagttaacactatgacatcaaaaatgtaatgagtaaca-cccaccgtttgtacaatggca 28769749  T
Q  348 ttaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    | ||| ||||  || |||||||||||||||||||||    
T  28769750 tcaaaggttcggtcctcatagtatcatcaattcatc 28769785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 259 - 379
Target Start/End: Original strand, 4330288 - 4330410
Alignment:
Q  259 gtgaagttataagaatgactttttggatgaagttaa-cactataacatcaaaattgtaatgagtaacacccc-aatgtttgtacaatgacattaaaagtt 356  Q
    |||||||||| ||||||||||||  ||||||| ||| ||||||| |||||||| |||| ||||||||||||| |||||||||||| ||  || |||||||    
T  4330288 gtgaagttatgagaatgacttttctgatgaagataaacactatagcatcaaaagtgtagtgagtaacacccccaatgtttgtacagtgggatcaaaagtt 4330387  T
Q  357 caatcatcatagtatcatcaatt 379  Q
    || ||||||||||||||||||||    
T  4330388 cagtcatcatagtatcatcaatt 4330410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 246 - 383
Target Start/End: Complemental strand, 7079254 - 7079106
Alignment:
Q  246 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaat-----------gt 334  Q
    ||||||||||||||| |||| || | ||||||||||| | ||||||||||||||||| ||||||| |||  |||||||||||||| |           ||    
T  7079254 ggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaacactataatatcaaaagtgttgtgagtaacaccccactaacacctcactgt 7079155  T
Q  335 ttgtacaatgacattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  7079154 ttgtacaatgacatcaaaagttcagtcatcatagtatcatcaattcatc 7079106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 243 - 376
Target Start/End: Original strand, 1547280 - 1547413
Alignment:
Q  243 aaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaa 342  Q
    ||||||||||| ||||||||||| || ||||||||||||  | |||||||||||||||||||| |||| |||  |||||||||| ||| ||||||| ||     
T  1547280 aaaggaaaattctatggtgaagtcatgagaatgacttttctggtgaagttaacactataacataaaaaatgttgtgagtaacactccactgtttgtgcag 1547379  T
Q  343 tgacattaaaagttcaatcatcatagtatcatca 376  Q
    || ||| ||||||||| |  ||||||||||||||    
T  1547380 tggcatcaaaagttcagttctcatagtatcatca 1547413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 244 - 383
Target Start/End: Original strand, 8222125 - 8222261
Alignment:
Q  244 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaat 343  Q
    |||||||||| || |||||||| |||| |||||| ||||   ||||||||||||||||||||||||| |||||||||||||||| ||  ||   ||||||    
T  8222125 aaggaaaattctacggtgaagtcataaaaatgacctttttagtgaagttaacactataacatcaaaaatgtaatgagtaacaccacaccgt---tacaat 8222221  T
Q  344 gacattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    | ||| ||||||||| |  |||||||||||||||||||||    
T  8222222 ggcatcaaaagttcagttctcatagtatcatcaattcatc 8222261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 242 - 383
Target Start/End: Original strand, 39393375 - 39393516
Alignment:
Q  242 taaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtaca 341  Q
    |||||||||||| || ||||||||||| ||||||||||||   ||||||||||||||||| |||||||| |||  ||||||| ||  || ||||||||||    
T  39393375 taaaggaaaattctacggtgaagttatgagaatgacttttctaatgaagttaacactatagcatcaaaagtgttgtgagtaatacttcattgtttgtaca 39393474  T
Q  342 atgacattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
     || ||| ||||||| ||||  ||||||||||| ||||||||    
T  39393475 gtggcatcaaaagtttaatccccatagtatcataaattcatc 39393516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 246 - 383
Target Start/End: Original strand, 42721035 - 42721172
Alignment:
Q  246 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 345  Q
    |||||||| ||||||||||| || | ||||| ||||| | |||||||| | ||||| ||| |||| | || |||||||||||||| |||||||||| | |    
T  42721035 ggaaaattctatggtgaagtcatgaaaatgatttttttggtgaagttagccctatatcataaaaaatatagtgagtaacaccccactgtttgtacagtaa 42721134  T
Q  346 cattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    ||| ||||||||||||  ||||||||||||||||||||    
T  42721135 catcaaaagttcaatccccatagtatcatcaattcatc 42721172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 286 - 382
Target Start/End: Original strand, 32216091 - 32216187
Alignment:
Q  286 tgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagttcaatcatcatagtatcatcaattcat 382  Q
    ||||||||||||||||||||||||| |||| |||||||||| ||| ||||||||||||| | | ||||||||| || || |||||||||||||||||    
T  32216091 tgaagttaacactataacatcaaaaatgtagtgagtaacacaccactgtttgtacaatggcgtcaaaagttcagtcctcgtagtatcatcaattcat 32216187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 248 - 383
Target Start/End: Original strand, 46931406 - 46931544
Alignment:
Q  248 aaaattttatggtgaagttataagaatgactttttggat---gaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatg 344  Q
    |||||| |||||||||||||||||||||| |||||   |   |||||||||||||||||||||||| |||||||||||| |||||| |||||||| || |    
T  46931406 aaaattctatggtgaagttataagaatgaattttttttttgtgaagttaacactataacatcaaaaatgtaatgagtaataccccactgtttgtagaacg 46931505  T
Q  345 acattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
     ||| |||| ||||  | ||||| |||||||||||||||    
T  46931506 gcatcaaaaattcagccctcataatatcatcaattcatc 46931544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 248 - 383
Target Start/End: Original strand, 41926161 - 41926296
Alignment:
Q  248 aaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgaca 347  Q
    |||||| |||||||||||||| | ||||| ||||| ||||||||||| ||||||||||||||| | || ||||||| | |||| |||||||||| || ||    
T  41926161 aaaattctatggtgaagttatgaaaatgatttttttgatgaagttaatactataacatcaaaaatatagtgagtaatatcccactgtttgtacagtggca 41926260  T
Q  348 ttaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    | | ||||||| ||   |||||||||||||||||||    
T  41926261 tcacaagttcagtccctatagtatcatcaattcatc 41926296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 252 - 383
Target Start/End: Original strand, 47279191 - 47279322
Alignment:
Q  252 ttttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaa 351  Q
    |||| ||||||||| || ||||||| ||||| | ||||||||||| ||||  ||||||| |||  |||||||||||||| |||||||||| || |||  |    
T  47279191 ttttttggtgaagtcatgagaatgatttttttggtgaagttaacattatactatcaaaagtgttgtgagtaacaccccactgtttgtacagtggcatcga 47279290  T
Q  352 aagttcaatcatcatagtatcatcaattcatc 383  Q
    ||||||| || |||||||||||||||||||||    
T  47279291 aagttcagtcctcatagtatcatcaattcatc 47279322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 245 - 383
Target Start/End: Complemental strand, 10182189 - 10182051
Alignment:
Q  245 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatg 344  Q
    ||||||||| ||||||||||| || | ||||||||||| | ||||||||| ||| |||||| |||| | || || ||||||| ||| |||||||||| ||    
T  10182189 aggaaaattctatggtgaagtcatgaaaatgacttttttggtgaagttaaaactgtaacataaaaaatatagtgcgtaacacgccactgtttgtacagtg 10182090  T
Q  345 acattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
     ||| ||||||||| || |||||||||| ||||||||||    
T  10182089 gcatcaaaagttcagtcctcatagtatcgtcaattcatc 10182051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 247 - 382
Target Start/End: Original strand, 14758038 - 14758173
Alignment:
Q  247 gaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgac 346  Q
    |||||||||| |||||||| || ||||||||||||  | |||||| |||||||||||||||||| |||| |||||| ||| | | |||||||||  || |    
T  14758038 gaaaattttacggtgaagtcatgagaatgacttttctggtgaagtcaacactataacatcaaaagtgtagtgagtagcacacaactgtttgtacggtggc 14758137  T
Q  347 attaaaagttcaatcatcatagtatcatcaattcat 382  Q
    || ||||||||| ||  |||||| ||||||||||||    
T  14758138 atcaaaagttcagtccccatagtttcatcaattcat 14758173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 246 - 383
Target Start/End: Complemental strand, 27267376 - 27267242
Alignment:
Q  246 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 345  Q
    |||||||| |||| |||||| || ||||||| ||||| | ||||||||||||||   ||| |||| |||| ||||| |||||||| |||||||||| ||     
T  27267376 ggaaaattatatg-tgaagtcatgagaatgatttttttggtgaagttaacactag--cataaaaaatgtagtgagtgacaccccactgtttgtacagtgg 27267280  T
Q  346 cattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    ||||||||||||| ||  ||||||||||||||||||||    
T  27267279 cattaaaagttcagtctccatagtatcatcaattcatc 27267242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 262 - 383
Target Start/End: Complemental strand, 27533144 - 27533023
Alignment:
Q  262 aagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagttcaatc 361  Q
    ||||||| ||||||||||||  | |||||||||||||||| |||||||| | |  || |||||| |||| | |||||||| || ||| ||||||||||||    
T  27533144 aagttatgagaatgacttttctggtgaagttaacactatagcatcaaaagtattgtgggtaacaacccactctttgtacagtggcatcaaaagttcaatc 27533045  T
Q  362 atcatagtatcatcaattcatc 383  Q
      ||||||||||||||||||||    
T  27533044 cccatagtatcatcaattcatc 27533023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 246 - 383
Target Start/End: Complemental strand, 47682673 - 47682537
Alignment:
Q  246 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacac-cccaatgtttgtacaatg 344  Q
    |||||||||||||||||||| || ||| ||||||||| | ||||||||||||  || ||| |||| |||  |||||||||| |||| || ||||||| ||    
T  47682673 ggaaaattttatggtgaagtcatgagagtgacttttttggtgaagttaacac--tagcataaaaaatgttgtgagtaacactcccactgcttgtacagtg 47682576  T
Q  345 acattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
      || ||||||||| || |||||||||||||||||||||    
T  47682575 gtatcaaaagttcattcctcatagtatcatcaattcatc 47682537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 246 - 383
Target Start/End: Complemental strand, 31621733 - 31621596
Alignment:
Q  246 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 345  Q
    |||||||| || |||||||| || ||||||||||||    |||||| |||||||||||||||||  |||| |||||| ||||||  | |||||||  ||     
T  31621733 ggaaaattctacggtgaagtcatgagaatgacttttctagtgaagtcaacactataacatcaaaggtgtattgagtagcaccccgctatttgtacggtgg 31621634  T
Q  346 cattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    ||| |||| |||| ||  ||||||||||||||||||||    
T  31621633 catcaaaaattcagtccccatagtatcatcaattcatc 31621596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 241 - 379
Target Start/End: Complemental strand, 238697 - 238560
Alignment:
Q  241 ataaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtac 340  Q
    |||||| |||||| ||| ||||||| |  | ||| ||||||| | ||||||||||||||||  || |||| |||  ||||||||| || | |||||||||    
T  238697 ataaagaaaaattctatagtgaagtcacgaaaataacttttttggtgaagttaacactatagtattaaaaatgttgtgagtaacatcc-actgtttgtac 238599  T
Q  341 aatgacattaaaagttcaatcatcatagtatcatcaatt 379  Q
    |||||||| ||||||||| ||  |||||||||| |||||    
T  238598 aatgacatcaaaagttcagtccccatagtatcaacaatt 238560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 242 - 340
Target Start/End: Original strand, 15168081 - 15168179
Alignment:
Q  242 taaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtac 340  Q
    |||||||||||| ||| ||||||| || ||||||  ||||  | |||||| ||||||||| |||||||| |||| |||||| ||||||| |||||||||    
T  15168081 taaaggaaaattctatcgtgaagtgatgagaatgctttttctggtgaagtcaacactatagcatcaaaagtgtagtgagtagcaccccactgtttgtac 15168179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 246 - 383
Target Start/End: Original strand, 21289661 - 21289805
Alignment:
Q  246 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaa-------aattgtaatgagtaacaccccaatgtttgt 338  Q
    |||||| | ||| ||||||| || ||||||||||||  | |||||||||||||||| ||| ||       || |||| |||||||||||||| |||||||    
T  21289661 ggaaaaatctattgtgaagtcatgagaatgacttttctggtgaagttaacactatatcataaataataaaaaatgtagtgagtaacaccccactgtttgt 21289760  T
Q  339 acaatgacattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    ||| || ||| ||||||||| ||   |||||||||||||||||||    
T  21289761 acagtggcatcaaaagttcagtccctatagtatcatcaattcatc 21289805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 383
Target Start/End: Original strand, 3534968 - 3535065
Alignment:
Q  286 tgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    ||||||||||||||||||||||||| |||  |||||||||||  | ||||||| || |||||| ||||||||| ||  | || ||| |||||||||||    
T  3534968 tgaagttaacactataacatcaaaagtgttgtgagtaacaccttactgtttgtgcagtgacatcaaaagttcagtccccttaatattatcaattcatc 3535065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 241 - 310
Target Start/End: Original strand, 22170745 - 22170814
Alignment:
Q  241 ataaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaa 310  Q
    ||||||||||||| ||||||||| | || | ||||||||||   ||||||||||||||||||||||||||    
T  22170745 ataaaggaaaattctatggtgaaatcatgaaaatgacttttctaatgaagttaacactataacatcaaaa 22170814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 383
Target Start/End: Original strand, 40884849 - 40884946
Alignment:
Q  286 tgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    |||||| ||||| |||||||||||| |||| |||||| ||||||| |||||||||  || ||| ||||||||| ||   |||||||| ||||||||||    
T  40884849 tgaagtcaacaccataacatcaaaagtgtagtgagtagcaccccactgtttgtacggtggcatcaaaagttcagtccctatagtatcttcaattcatc 40884946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 246 - 383
Target Start/End: Complemental strand, 27227657 - 27227528
Alignment:
Q  246 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 345  Q
    |||||||| ||||||||||| || ||||||| ||||| | ||||||||||||||   ||| |||| |||| |      |||| || |||||||||| ||     
T  27227657 ggaaaattctatggtgaagtcatgagaatgatttttttggtgaagttaacactag--cataaaaaatgtact------cacctcactgtttgtacagtgg 27227566  T
Q  346 cattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    ||| ||||||||| || |||||||||||||||||||||    
T  27227565 catcaaaagttcagtcctcatagtatcatcaattcatc 27227528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 248 - 358
Target Start/End: Complemental strand, 27564084 - 27563973
Alignment:
Q  248 aaaattttatggtgaagttataagaatgactttttgga-tgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgac 346  Q
    |||||| || ||||||||||| | ||||| |||||  | |||||||||||||||||| | |||| | || |||||||||| ||| |||||||| | ||||    
T  27564084 aaaattctacggtgaagttatgaaaatgattttttttagtgaagttaacactataactttaaaaatatagtgagtaacactccactgtttgtatagtgac 27563985  T
Q  347 attaaaagttca 358  Q
    || |||||||||    
T  27563984 atcaaaagttca 27563973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 333 - 382
Target Start/End: Original strand, 25160715 - 25160764
Alignment:
Q  333 gtttgtacaatgacattaaaagttcaatcatcatagtatcatcaattcat 382  Q
    |||||||||||| ||| ||||||||| || ||||||||||||||||||||    
T  25160715 gtttgtacaatggcatcaaaagttcagtcctcatagtatcatcaattcat 25160764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 239 - 279
Target Start/End: Complemental strand, 4964102 - 4964062
Alignment:
Q  239 aaataaaggaaaattttatggtgaagttataagaatgactt 279  Q
    ||||||||||||||| |||||||||||||| ||||| ||||    
T  4964102 aaataaaggaaaattctatggtgaagttatgagaattactt 4964062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 95; Significance: 2e-46; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 245 - 383
Target Start/End: Complemental strand, 3655388 - 3655250
Alignment:
Q  245 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatg 344  Q
    ||||||||||||||||||||| |||| ||||||||||| ||| |||||||||||||||||| |||| |||||||||||||||||||  ||||||||||||    
T  3655388 aggaaaattttatggtgaagtcataaaaatgacttttttgataaagttaacactataacataaaaaatgtaatgagtaacaccccaccgtttgtacaatg 3655289  T
Q  345 acattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    |||| ||||||||| || |||||||||||||||||||||    
T  3655288 acatcaaaagttcagtcctcatagtatcatcaattcatc 3655250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 246 - 382
Target Start/End: Original strand, 37203058 - 37203194
Alignment:
Q  246 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 345  Q
    |||||||| ||||||||||| |||| ||||| ||||| |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| ||     
T  37203058 ggaaaattctatggtgaagtcataaaaatgatttttttgatgaagttaacactataacatcaaaattgtagtgagtaacaccccactgtttgtacagtgg 37203157  T
Q  346 cattaaaagttcaatcatcatagtatcatcaattcat 382  Q
    ||| ||||||||| || ||||||||||||||||||||    
T  37203158 catcaaaagttcagtcctcatagtatcatcaattcat 37203194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 243 - 383
Target Start/End: Original strand, 47481510 - 47481650
Alignment:
Q  243 aaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaa 342  Q
    ||||||||||||||||||||||| ||| ||||||  |||| | ||||||||||||||||||||||||| ||||||||||||||||||| |||||||| ||    
T  47481510 aaaggaaaattttatggtgaagtcataggaatgatgtttttggtgaagttaacactataacatcaaaaatgtaatgagtaacaccccactgtttgtagaa 47481609  T
Q  343 tgacattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    |||||| ||||||| |  | |||||||||||||||||||||    
T  47481610 tgacatcaaaagtttagccctcatagtatcatcaattcatc 47481650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 245 - 383
Target Start/End: Complemental strand, 26941446 - 26941308
Alignment:
Q  245 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatg 344  Q
    ||||||||| ||||||||||| |||||||||| ||||| | ||||||||||||||||| ||||||||| ||||||||||||||||| |||||||| ||||    
T  26941446 aggaaaattctatggtgaagtcataagaatgatttttttggtgaagttaacactataaaatcaaaattataatgagtaacaccccactgtttgtataatg 26941347  T
Q  345 acattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    |||| ||||||||| || |||| ||||||| ||||||||    
T  26941346 acatcaaaagttcagtcctcatggtatcattaattcatc 26941308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 245 - 383
Target Start/End: Complemental strand, 40552445 - 40552307
Alignment:
Q  245 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatg 344  Q
    ||||||||| ||||||||||| || ||||||||||||| |  |||||||||||||||||||||||| ||||||||||||||| |||  ||||||||||||    
T  40552445 aggaaaattctatggtgaagtcatgagaatgacttttttggagaagttaacactataacatcaaaaatgtaatgagtaacactccaccgtttgtacaatg 40552346  T
Q  345 acattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    |||| ||||||||| || ||||| |||||||||||||||    
T  40552345 acatcaaaagttcagtcctcataatatcatcaattcatc 40552307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 246 - 383
Target Start/End: Complemental strand, 20373481 - 20373344
Alignment:
Q  246 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 345  Q
    |||||||||||| ||||||| |||||||||| ||||| | ||||||||| ||||||||||||||| ||||| ||||||||||||| ||||||||||||||    
T  20373481 ggaaaattttatagtgaagtcataagaatgatttttttggtgaagttaatactataacatcaaaaatgtaacgagtaacaccccactgtttgtacaatga 20373382  T
Q  346 cattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    ||| ||||||||| |  |||| ||||||||||||||||    
T  20373381 catcaaaagttcagttctcatggtatcatcaattcatc 20373344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 246 - 379
Target Start/End: Original strand, 37157699 - 37157831
Alignment:
Q  246 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 345  Q
    |||||||| ||||||||||| || | |||| |||||| |||||||||||||||||||||||||||||||| |||||||||||||| || ||||||| ||     
T  37157699 ggaaaattctatggtgaagtcatgaaaatggcttttttgatgaagttaacactataacatcaaaattgtagtgagtaacaccccactg-ttgtacagtgg 37157797  T
Q  346 cattaaaagttcaatcatcatagtatcatcaatt 379  Q
    ||| ||||||||| ||||||||||||||||||||    
T  37157798 catcaaaagttcagtcatcatagtatcatcaatt 37157831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 246 - 383
Target Start/End: Original strand, 4015451 - 4015588
Alignment:
Q  246 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 345  Q
    |||||||| ||||||||||| || ||||||||||||  |||||||||||||||||| |||||||| |||  |||||||||||| | |||||||| | |||    
T  4015451 ggaaaattctatggtgaagtcatgagaatgacttttctgatgaagttaacactatagcatcaaaagtgttgtgagtaacacccaactgtttgtagagtga 4015550  T
Q  346 cattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    ||| ||||||||| || |||||||||||||||||||||    
T  4015551 catcaaaagttcagtcctcatagtatcatcaattcatc 4015588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 246 - 383
Target Start/End: Complemental strand, 51213166 - 51213029
Alignment:
Q  246 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 345  Q
    |||||||| ||||||||||| || ||||||||||||| | ||||||||||||| |||||| |||| ||||||||| ||||||||| |||||||||||||     
T  51213166 ggaaaattctatggtgaagtcatgagaatgacttttttggtgaagttaacactgtaacataaaaaatgtaatgagcaacaccccactgtttgtacaatgg 51213067  T
Q  346 cattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    ||| ||||||| | || ||||||||||||||| |||||    
T  51213066 catcaaaagttgagtcctcatagtatcatcaactcatc 51213029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 292 - 383
Target Start/End: Complemental strand, 42506214 - 42506123
Alignment:
Q  292 taacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    |||||||||||||||||||||||||||||||| |||||| ||||||||||||||||| ||||||||| || |||||||||||||||||||||    
T  42506214 taacactataacatcaaaattgtaatgagtaataccccactgtttgtacaatgacatcaaaagttcagtcctcatagtatcatcaattcatc 42506123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 244 - 383
Target Start/End: Original strand, 48354930 - 48355069
Alignment:
Q  244 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaat 343  Q
    |||||||||| ||||||||||| || ||||||| ||||  | ||||||||||||||||| || |||| ||||||||||||||||||| ||||||||||||    
T  48354930 aaggaaaattctatggtgaagtcatgagaatgatttttatggtgaagttaacactataatattaaaaatgtaatgagtaacaccccattgtttgtacaat 48355029  T
Q  344 gacattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    | ||| ||||||||| |  ||||||||||||||| |||||    
T  48355030 ggcatcaaaagttcagttctcatagtatcatcaactcatc 48355069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 239 - 383
Target Start/End: Complemental strand, 21009997 - 21009850
Alignment:
Q  239 aaataaaggaaaattttatggtgaagttataagaatgactttttggat---gaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtt 335  Q
    |||| ||||||||||||||||||||||||||||||||| |||||   |   ||| || ||||||||||||||||| ||||||||||||||||||| | ||    
T  21009997 aaattaaggaaaattttatggtgaagttataagaatgatttttttttttgtgaatttgacactataacatcaaaaatgtaatgagtaacaccccactatt 21009898  T
Q  336 tgtacaatgacattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    |||| |||||||| |||||||||  | ||||| |||||||||||||||    
T  21009897 tgtagaatgacatcaaaagttcagccctcatattatcatcaattcatc 21009850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 239 - 383
Target Start/End: Original strand, 35844310 - 35844454
Alignment:
Q  239 aaataaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgt 338  Q
    ||||||||||||||| ||||||||||| || | ||||||||||  | ||||||||||||||||||| ||||| |||  ||||||||||| || |||||||    
T  35844310 aaataaaggaaaattctatggtgaagtcatgataatgacttttctggtgaagttaacactataacaacaaaaatgttgtgagtaacacctcactgtttgt 35844409  T
Q  339 acaatgacattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    ||| |||||| ||||||| | ||  ||||||||||||||||||||    
T  35844410 acagtgacatcaaaagtttagtccccatagtatcatcaattcatc 35844454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 245 - 383
Target Start/End: Complemental strand, 7327669 - 7327530
Alignment:
Q  245 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaa-cactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaat 343  Q
    ||||||||| |||||||||||||| |||||||||||||   ||||||||| |||||||||||||||| |||  |||||||||| ||| | |||||||| |    
T  7327669 aggaaaattctatggtgaagttatgagaatgacttttttagtgaagttaaacactataacatcaaaagtgttgtgagtaacactccattatttgtacagt 7327570  T
Q  344 gacattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    ||||| ||||||||| ||  ||||||||||||||||||||    
T  7327569 gacatcaaaagttcagtccccatagtatcatcaattcatc 7327530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 245 - 383
Target Start/End: Complemental strand, 52041109 - 52040970
Alignment:
Q  245 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacacccc-aatgtttgtacaat 343  Q
    ||||||||| |  |||||||| || ||||||||||||  | ||||||||| ||||||||||||||| |||| |||||||| |||| |||||||||| | |    
T  52041109 aggaaaattctgaggtgaagtcatgagaatgacttttctggtgaagttaatactataacatcaaaagtgtagtgagtaactccccaaatgtttgtatagt 52041010  T
Q  344 gacattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    | ||| ||||||||| ||||||||||||||||||||||||    
T  52041009 ggcatcaaaagttcagtcatcatagtatcatcaattcatc 52040970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 244 - 383
Target Start/End: Complemental strand, 4761838 - 4761697
Alignment:
Q  244 aaggaaaattttatggtgaagttataagaatgactttttg--gatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtaca 341  Q
    |||||||||| ||||||||| | || ||| |||||||||   | ||||||||| ||||||| ||||||| |||||||||||||||  || ||||||||||    
T  4761838 aaggaaaattctatggtgaattcatgagattgacttttttttggtgaagttaatactataatatcaaaaatgtaatgagtaacacttcactgtttgtaca 4761739  T
Q  342 atgacattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    ||||||| ||||||||| || ||||||||||||||| |||||    
T  4761738 atgacatcaaaagttcagtcctcatagtatcatcaactcatc 4761697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 248 - 383
Target Start/End: Complemental strand, 43976068 - 43975936
Alignment:
Q  248 aaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgaca 347  Q
    |||||||||||||||||| || |||||||||||||   |||||| ||||||||| |||||||| |||| |||||| ||| ||| | ||||||| ||||||    
T  43976068 aaaattttatggtgaagtcatgagaatgacttttt---tgaagtcaacactatagcatcaaaagtgtagtgagtagcactccactatttgtacgatgaca 43975972  T
Q  348 ttaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    | ||||||| |||| ||||| |||||||||||||||    
T  43975971 tcaaaagtttaatcctcataatatcatcaattcatc 43975936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 246 - 383
Target Start/End: Original strand, 54505799 - 54505935
Alignment:
Q  246 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 345  Q
    ||||||||||||| ||||||   |||||||||||||| | ||||||||||||||||||||||||| ||||||||||||||||||| | ||| || |||||    
T  54505799 ggaaaattttatgatgaagtcgcaagaatgacttttttgttgaagttaacactataacatcaaaaatgtaatgagtaacaccccattatttatagaatga 54505898  T
Q  346 cattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    ||| |||| ||| | | |||||||||||| ||| ||||    
T  54505899 catcaaaaattc-agcctcatagtatcataaatacatc 54505935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 256 - 383
Target Start/End: Original strand, 29099356 - 29099483
Alignment:
Q  256 atggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagt 355  Q
    |||||||||| || ||||||||||||  | |||||||||||||||||||| |||| |||  |||||||||||||| |||||||||| ||||||  |||||    
T  29099356 atggtgaagtcattagaatgacttttctggtgaagttaacactataacataaaaaatgtcgtgagtaacaccccactgtttgtacagtgacatctaaagt 29099455  T
Q  356 tcaatcatcatagtatcatcaattcatc 383  Q
    ||| ||  | ||||||||||||||||||    
T  29099456 tcagtccccttagtatcatcaattcatc 29099483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 245 - 383
Target Start/End: Original strand, 11466814 - 11466952
Alignment:
Q  245 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatg 344  Q
    ||||||||| |||||||||||  | ||||||||||||  ||||||||||| |||||||||||  || |||  |||||||||||||| |||||||||| ||    
T  11466814 aggaaaattctatggtgaagtcttgagaatgacttttctgatgaagttaagactataacatcgcaagtgttgtgagtaacaccccactgtttgtacagtg 11466913  T
Q  345 acattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
     ||| ||||||| | ||  ||||||||||||||||||||    
T  11466914 gcatcaaaagtttagtccccatagtatcatcaattcatc 11466952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 248 - 382
Target Start/End: Complemental strand, 46297945 - 46297811
Alignment:
Q  248 aaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgaca 347  Q
    |||||| ||||||||||| || | ||||||||||  | ||||||||||||||||||||||||| | || |||||||||| ||| ||||||||||||| |     
T  46297945 aaaattctatggtgaagtcatgaaaatgacttttctggtgaagttaacactataacatcaaaaatatagtgagtaacacaccactgtttgtacaatggcg 46297846  T
Q  348 ttaaaagttcaatcatcatagtatcatcaattcat 382  Q
    | ||||||||| ||  | |||||||||||||||||    
T  46297845 tcaaaagttcagtccccgtagtatcatcaattcat 46297811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 229 - 383
Target Start/End: Complemental strand, 54828902 - 54828749
Alignment:
Q  229 acatacaataaaataaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccc 328  Q
    ||||| ||||| || ||| |||||||||||||||||| |||| ||| | ||||| | | |||||||||||||||||| |||| |||||||||||||||||    
T  54828902 acatataataatattaagaaaaattttatggtgaagtcataaaaataatttttttggtaaagttaacactataacat-aaaaatgtaatgagtaacaccc 54828804  T
Q  329 caatgtttgtacaatgacattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    ||  ||||  |||| ||||| |||| |||| || |||||| ||||||||||||||    
T  54828803 caccgtttaaacaacgacatcaaaaattcattcttcatagcatcatcaattcatc 54828749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 243 - 383
Target Start/End: Original strand, 34132923 - 34133063
Alignment:
Q  243 aaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaa 342  Q
    ||||||||||| |||  |||||| |  | ||||||||||| | |||| |||||||||||  ||||||| |||  |||||||||||||| |||||||||||    
T  34132923 aaaggaaaattctataatgaagtcacgaaaatgacttttttggtgaaattaacactatagtatcaaaaatgttgtgagtaacaccccactgtttgtacaa 34133022  T
Q  343 tgacattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    |||||| ||||||||| ||  |||| |||||||||||||||    
T  34133023 tgacatcaaaagttcagtccccataatatcatcaattcatc 34133063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 246 - 383
Target Start/End: Original strand, 45174494 - 45174633
Alignment:
Q  246 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgt--aatgagtaacaccccaatgtttgtacaat 343  Q
    ||||||||||||||||||||| | ||||| ||||||| | ||||||||||||||||||||||||| |||    ||||||||||  || |||||||||| |    
T  45174494 ggaaaattttatggtgaagttgtgagaataacttttttggtgaagttaacactataacatcaaaagtgttgtgtgagtaacacttcactgtttgtacagt 45174593  T
Q  344 gacattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
      ||| ||||||||| ||  ||||||||||||||||||||    
T  45174594 agcatcaaaagttcagtccccatagtatcatcaattcatc 45174633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 261 - 383
Target Start/End: Complemental strand, 11357535 - 11357412
Alignment:
Q  261 gaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaa-tgtttgtacaatgacattaaaagttcaa 359  Q
    ||||| || ||||||||||||  | |||||||||||||||| |||||||| | || ||||||||||||| | |||||||||| |  ||| |||||||||     
T  11357535 gaagtcatgagaatgacttttctggtgaagttaacactatagcatcaaaagtatagtgagtaacacccccactgtttgtacagttgcatcaaaagttcag 11357436  T
Q  360 tcatcatagtatcatcaattcatc 383  Q
    ||||||||||||||||||||||||    
T  11357435 tcatcatagtatcatcaattcatc 11357412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 245 - 383
Target Start/End: Complemental strand, 44186687 - 44186549
Alignment:
Q  245 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatg 344  Q
    ||||||||| |||| ||||||    ||||||| ||||| | |||||||||||||||| |||||||| |||  |||||||||||||  ||||| |||| ||    
T  44186687 aggaaaattctatgatgaagtcgagagaatgatttttttggtgaagttaacactatagcatcaaaagtgttgtgagtaacaccccgctgtttatacagtg 44186588  T
Q  345 acattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    |||| ||||||||| ||  ||||||||||||||||||||    
T  44186587 acatcaaaagttcagtccccatagtatcatcaattcatc 44186549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 244 - 383
Target Start/End: Original strand, 22450957 - 22451096
Alignment:
Q  244 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaat 343  Q
    |||||||||| ||||||||||| || ||||||| ||||  | |||||| ||||||||| |||||||| |||| |||||| |||| || ||||||||   |    
T  22450957 aaggaaaattctatggtgaagtcatgagaatgatttttctggtgaagtcaacactatagcatcaaaagtgtagtgagtagcacctcactgtttgtatggt 22451056  T
Q  344 gacattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    | ||| ||||||||| ||  ||||||||||||||||||||    
T  22451057 ggcatcaaaagttcagtccccatagtatcatcaattcatc 22451096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 234 - 383
Target Start/End: Complemental strand, 53229350 - 53229200
Alignment:
Q  234 caataaaataaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccc-caat 332  Q
    |||| ||| |||| ||||||||| |||||||| || | ||| | ||||  | |||| ||||||||||| |||||||| |||| |||| ||||||| ||||    
T  53229350 caattaaaaaaagaaaaattttaaggtgaagtcatgaaaattatttttctggtgaaattaacactatagcatcaaaagtgtagtgagcaacaccctcaat 53229251  T
Q  333 gtttgtacaatgacattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    ||||||||| |  ||| ||||||||| |||||||| |||||||||||||||    
T  53229250 gtttgtacagttgcatcaaaagttcagtcatcataatatcatcaattcatc 53229200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 248 - 383
Target Start/End: Complemental strand, 24708295 - 24708165
Alignment:
Q  248 aaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgaca 347  Q
    ||||||||||||||||||||| | |||||||||||   ||| ||||||||  ||||||||||| || | ||||||||||| || |||  ||||| |||||    
T  24708295 aaaattttatggtgaagttatcaaaatgactttttt--tgatgttaacacg-taacatcaaaactgcagtgagtaacacctcactgt--gtacagtgaca 24708201  T
Q  348 ttaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    | ||||||||| || |||||||||||||||||||||    
T  24708200 tcaaaagttcagtcttcatagtatcatcaattcatc 24708165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 246 - 383
Target Start/End: Complemental strand, 27480564 - 27480427
Alignment:
Q  246 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 345  Q
    |||||||| |||| |||||| || |||||||  |||| | | |||| |||||||||||||||||| | ||||||||| || || | |||||||||  |||    
T  27480564 ggaaaattctatgatgaagtcatgagaatgatatttttggtaaagtcaacactataacatcaaaagtataatgagtagcatccaattgtttgtacggtga 27480465  T
Q  346 cattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    ||| ||||||||| ||  ||||||||||||||||||||    
T  27480464 catcaaaagttcagtccccatagtatcatcaattcatc 27480427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 259 - 383
Target Start/End: Original strand, 40935995 - 40936119
Alignment:
Q  259 gtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagttca 358  Q
    ||||||| || ||||||| ||||  | |||||||||||||||| |||||||| |||   |||||||||| || ||||| |||| |||||| |||||||||    
T  40935995 gtgaagtcatgagaatgatttttctggtgaagttaacactatagcatcaaaagtgttgcgagtaacacctcattgtttatacagtgacatcaaaagttca 40936094  T
Q  359 atcatcatagtatcatcaattcatc 383  Q
     || ||||||||||||| |||||||    
T  40936095 gtcctcatagtatcatctattcatc 40936119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 244 - 383
Target Start/End: Original strand, 21193595 - 21193734
Alignment:
Q  244 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaat 343  Q
    |||||||||| |||||| |||| || ||||||||||||  | ||||||||||||| |   ||||||| |||  |||||||||||||| |||||||| | |    
T  21193595 aaggaaaattctatggtaaagtcatgagaatgacttttctggtgaagttaacactgttgaatcaaaagtgttgtgagtaacaccccactgtttgtagagt 21193694  T
Q  344 gacattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    ||||| ||||||||| ||  ||| ||||||| ||||||||    
T  21193695 gacatcaaaagttcagtccccatggtatcattaattcatc 21193734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 243 - 383
Target Start/End: Complemental strand, 33378970 - 33378833
Alignment:
Q  243 aaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaa 342  Q
    ||||||||||| |||||  ||||||| ||||||||||||    |||||| |||||||||  ||||||| |||| ||||||  |||||||| |||||||      
T  33378970 aaaggaaaattctatggcaaagttatgagaatgacttttg---tgaagtcaacactatagtatcaaaagtgtagtgagtagtaccccaatatttgtacgg 33378874  T
Q  343 tgacattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    |||||| ||||||||| ||  |||||||| |||||||||||    
T  33378873 tgacatcaaaagttcagtccccatagtattatcaattcatc 33378833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 286 - 383
Target Start/End: Original strand, 2007964 - 2008061
Alignment:
Q  286 tgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    |||||||||||||||| | | |||| |||  |||||||||||||| |||||||||| || ||| ||||||||||||  ||||| ||||||||||||||    
T  2007964 tgaagttaacactatagcgttaaaagtgttgtgagtaacaccccactgtttgtacagtggcatcaaaagttcaatccccatagcatcatcaattcatc 2008061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 239 - 382
Target Start/End: Complemental strand, 46994842 - 46994710
Alignment:
Q  239 aaataaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgt 338  Q
    |||| |||||||||| || ||||||||  ||||||||| ||||| | ||||||||| ||||||||||||||| |||||||||||||||           |    
T  46994842 aaatgaaggaaaattctacggtgaagtcgtaagaatgatttttttggtgaagttaatactataacatcaaaa-tgtaatgagtaacac----------at 46994754  T
Q  339 acaatgacattaaaagttcaatcatcatagtatcatcaattcat 382  Q
    |||||||||| ||||||||| || ||||||||||||||| ||||    
T  46994753 acaatgacatcaaaagttcagtcctcatagtatcatcaactcat 46994710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 244 - 383
Target Start/End: Original strand, 39282642 - 39282780
Alignment:
Q  244 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaat 343  Q
    |||||||||| ||||||||||| || | ||||| ||||  ||| || |||||||||||||||||||| |||  ||||||| |||||| ||||| |||| |    
T  39282642 aaggaaaattctatggtgaagtcatgaaaatgatttttctgataaaattaacactataacatcaaaactgt-gtgagtaataccccactgtttatacagt 39282740  T
Q  344 gacattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    | ||| ||||||||| |  ||||| ||||||| |||||||    
T  39282741 ggcatcaaaagttcagttctcatattatcatccattcatc 39282780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 286 - 383
Target Start/End: Original strand, 3362284 - 3362381
Alignment:
Q  286 tgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    |||||||||||||||| ||||| || | || ||||||||| |||| | |||||||| || ||| ||||||||| || |||| ||||||||||||||||    
T  3362284 tgaagttaacactatagcatcagaaatatagtgagtaacatcccactatttgtacagtggcatcaaaagttcactcctcatggtatcatcaattcatc 3362381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 249 - 383
Target Start/End: Complemental strand, 22446247 - 22446112
Alignment:
Q  249 aaattttatggtgaagttataagaatgactttttg-gatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgaca 347  Q
    ||||| || |||||||| || | |||||||||||  | ||||||||||| |||| |||||||| | || |||||||||||||| | |||||||| || ||    
T  22446247 aaattctacggtgaagtcatgaaaatgactttttttggtgaagttaacattatatcatcaaaaatatagtgagtaacaccccact-tttgtacagtggca 22446149  T
Q  348 ttaaaagttc-aatcatcatagtatcatcaattcatc 383  Q
    | |||||||| || | |||||||||||||||||||||    
T  22446148 tcaaaagttcaaaccctcatagtatcatcaattcatc 22446112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 246 - 330
Target Start/End: Original strand, 44891498 - 44891581
Alignment:
Q  246 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacacccca 330  Q
    |||||||| || |||||||| || | ||||||||||||| ||||||||||||||||||||||||| |||  ||||||||| ||||    
T  44891498 ggaaaattatacggtgaagtcatgaaaatgactttttgg-tgaagttaacactataacatcaaaagtgttgtgagtaacatccca 44891581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 274 - 383
Target Start/End: Original strand, 53176074 - 53176182
Alignment:
Q  274 tgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagttcaatcatcatagtatca 373  Q
    ||||||||  |||||||||||||  |||||||||||| |||  | |||||   || | |||||||||||| |||| ||||||||| || |||||||||||    
T  53176074 tgacttttctgatgaagttaacatcataacatcaaaaatgttgtaagtaatgtcc-actgtttgtacaataacatcaaaagttcagtcctcatagtatca 53176172  T
Q  374 tcaattcatc 383  Q
    ||||||||||    
T  53176173 tcaattcatc 53176182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 242 - 310
Target Start/End: Complemental strand, 55343473 - 55343405
Alignment:
Q  242 taaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaa 310  Q
    |||||||||||| ||||||||||| |  | ||||||||||  ||||||||||||||||||| |||||||    
T  55343473 taaaggaaaattctatggtgaagtcacgaaaatgacttttctgatgaagttaacactataatatcaaaa 55343405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 238 - 281
Target Start/End: Original strand, 53175706 - 53175749
Alignment:
Q  238 aaaataaaggaaaattttatggtgaagttataagaatgactttt 281  Q
    |||| |||||||||||||||||||||||||| ||||||||||||    
T  53175706 aaaaaaaaggaaaattttatggtgaagttatgagaatgactttt 53175749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 242 - 383
Target Start/End: Original strand, 32373459 - 32373598
Alignment:
Q  242 taaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtaca 341  Q
    |||||| ||||| |||| |||||| || ||||||||||||   || |||||||||||||| |||||||| |||  ||||||  || ||| ||||||||||    
T  32373459 taaagggaaattctatgatgaagtcatgagaatgacttttccaataaagttaacactatagcatcaaaagtgttgtgagta--actccactgtttgtaca 32373556  T
Q  342 atgacattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
     || ||| |||||||| | |   || ||||||||||||||||    
T  32373557 gtggcatcaaaagttccaccccaatggtatcatcaattcatc 32373598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 383
Target Start/End: Complemental strand, 24489107 - 24489010
Alignment:
Q  286 tgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    ||||||||| ||||||  || |||| |||  |||||||||  ||| |||||| |||||||||| ||||||||| ||  |||| |||||||||||||||    
T  24489107 tgaagttaagactatagtattaaaaatgttgtgagtaacattccactgtttgcacaatgacatcaaaagttcagtccccatattatcatcaattcatc 24489010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 247 - 376
Target Start/End: Original strand, 25579731 - 25579860
Alignment:
Q  247 gaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgac 346  Q
    |||||||||||||| ||||||| ||||||| ||||  | ||||||||| |||||| |||||||| |||  ||| |||||  | | | ||| |||| ||||    
T  25579731 gaaaattttatggttaagttatgagaatgatttttctggtgaagttaatactatagcatcaaaagtgttgtgaataacattctactatttatacagtgac 25579830  T
Q  347 attaaaagttcaatcatcatagtatcatca 376  Q
    || ||||||||| ||  |||| ||||||||    
T  25579831 atcaaaagttcagtccccatattatcatca 25579860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 289 - 330
Target Start/End: Complemental strand, 41585449 - 41585408
Alignment:
Q  289 agttaacactataacatcaaaattgtaatgagtaacacccca 330  Q
    |||||||||||||||||||||| | |||||||||||||||||    
T  41585449 agttaacactataacatcaaaaatataatgagtaacacccca 41585408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 330
Target Start/End: Original strand, 33698219 - 33698263
Alignment:
Q  286 tgaagttaacactataacatcaaaattgtaatgagtaacacccca 330  Q
    ||||||||||||||||||||||||| |||  ||||||||||||||    
T  33698219 tgaagttaacactataacatcaaaaatgttgtgagtaacacccca 33698263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 272 - 327
Target Start/End: Original strand, 2613907 - 2613962
Alignment:
Q  272 aatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacacc 327  Q
    ||||||||||| | ||||||||||||||||||| ||||| |||  |||||||||||    
T  2613907 aatgacttttttgttgaagttaacactataacaccaaaagtgttgtgagtaacacc 2613962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 239 - 294
Target Start/End: Complemental strand, 19606969 - 19606914
Alignment:
Q  239 aaataaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaa 294  Q
    ||||||| ||||||| |||||||||||||||| ||||||||||  | |||||||||    
T  19606969 aaataaatgaaaattctatggtgaagttataaaaatgacttttctggtgaagttaa 19606914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 243 - 294
Target Start/End: Original strand, 47870211 - 47870262
Alignment:
Q  243 aaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaa 294  Q
    ||||||||||| |||  ||||||||| ||||||||||||| |||||||||||    
T  47870211 aaaggaaaattctatactgaagttatgagaatgactttttcgatgaagttaa 47870262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 247 - 341
Target Start/End: Complemental strand, 11835790 - 11835701
Alignment:
Q  247 gaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtaca 341  Q
    ||||||| ||||||||||| || ||||||| ||||| | |||||||||||||||     ||||| |||  ||||||||||| || ||||||||||    
T  11835790 gaaaattctatggtgaagtcatgagaatgatttttttggtgaagttaacactat-----caaaagtgttgtgagtaacacctcactgtttgtaca 11835701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 247 - 303
Target Start/End: Original strand, 29163839 - 29163895
Alignment:
Q  247 gaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataac 303  Q
    ||||||||||||||||||| || | ||||| ||||  | ||||||||||||||||||    
T  29163839 gaaaattttatggtgaagtcattaaaatgatttttctggtgaagttaacactataac 29163895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 294
Target Start/End: Complemental strand, 42665593 - 42665541
Alignment:
Q  242 taaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaa 294  Q
    |||||||||||| |||||||||||||| | ||||| ||||| | |||||||||    
T  42665593 taaaggaaaattctatggtgaagttatgataatgatttttttggtgaagttaa 42665541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 91; Significance: 5e-44; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 245 - 383
Target Start/End: Complemental strand, 1150297 - 1150159
Alignment:
Q  245 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatg 344  Q
    ||||||||| ||||||||||| |||||||||||||||| | |||||||||| |||||||||||||| |||||||||||||| |||| ||||||||||| |    
T  1150297 aggaaaattctatggtgaagtcataagaatgacttttttggtgaagttaacgctataacatcaaaaatgtaatgagtaacatcccactgtttgtacaacg 1150198  T
Q  345 acattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    |||| ||||||||| |||||||||||||||||| |||||    
T  1150197 acatcaaaagttcagtcatcatagtatcatcaactcatc 1150159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 246 - 383
Target Start/End: Complemental strand, 10555393 - 10555256
Alignment:
Q  246 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 345  Q
    |||||||| || |||||||| || ||||||||||||| | |||||||||||||||||||| |||| ||||||||||||||| ||| ||||||||||||||    
T  10555393 ggaaaattctacggtgaagtcatgagaatgacttttttggtgaagttaacactataacataaaaaatgtaatgagtaacactccactgtttgtacaatga 10555294  T
Q  346 cattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    ||| |||||||||||| |||||||||||||||||||||    
T  10555293 catcaaaagttcaatcctcatagtatcatcaattcatc 10555256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 255 - 382
Target Start/End: Complemental strand, 37970701 - 37970574
Alignment:
Q  255 tatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaag 354  Q
    ||||||||||| || ||||||||||||| | ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||| ||| |||||    
T  37970701 tatggtgaagtcatgagaatgacttttttggtgaagttaacactataacatcaaaaatgtaatgagtaacaccccactgtttgtacaatgccatcaaaag 37970602  T
Q  355 ttcaatcatcatagtatcatcaattcat 382  Q
    ||||  | ||||||||||||||||||||    
T  37970601 ttcagccctcatagtatcatcaattcat 37970574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 244 - 383
Target Start/End: Complemental strand, 43643788 - 43643649
Alignment:
Q  244 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaat 343  Q
    |||||||||| ||||||||||| || ||||||||| ||| | ||||||||||||||||||||||||| ||||||||||||||| | | ||||||||||||    
T  43643788 aaggaaaattctatggtgaagtcatgagaatgactattttggtgaagttaacactataacatcaaaaatgtaatgagtaacactctactgtttgtacaat 43643689  T
Q  344 gacattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    |||||  ||||||||||| ||||||||||||||| |||||    
T  43643688 gacatccaaagttcaatcttcatagtatcatcaactcatc 43643649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 245 - 383
Target Start/End: Complemental strand, 30654775 - 30654637
Alignment:
Q  245 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatg 344  Q
    ||||||||||||||||||||| |||||| ||| ||||| | |||||||||||||||||||| |||| ||||||||||||||||||| |||||||  ||||    
T  30654775 aggaaaattttatggtgaagtcataagagtgatttttttggtgaagttaacactataacataaaaaatgtaatgagtaacaccccactgtttgttgaatg 30654676  T
Q  345 acattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    |||| |||||||||  | |||||||||||||| ||||||    
T  30654675 acatcaaaagttcagccttcatagtatcatcacttcatc 30654637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 243 - 383
Target Start/End: Original strand, 1204923 - 1205063
Alignment:
Q  243 aaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaa 342  Q
    |||||||||||||| |||||||| || ||||||||||||  | |||||||||||||||||||| |||| |||| ||||||||||  || |||||||||||    
T  1204923 aaaggaaaattttacggtgaagtcatgagaatgacttttctggtgaagttaacactataacataaaaaatgtagtgagtaacacatcactgtttgtacaa 1205022  T
Q  343 tgacattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    |||||| ||||||||| || |||||||||||||| ||||||    
T  1205023 tgacatcaaaagttcagtcctcatagtatcatcagttcatc 1205063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 244 - 383
Target Start/End: Complemental strand, 36695159 - 36695020
Alignment:
Q  244 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaat 343  Q
    |||||||||| ||||||||||| |  | ||||||||||  ||||||||||||||||||| ||||||| |||  |||||||||||||| ||||||||||||    
T  36695159 aaggaaaattctatggtgaagtcaggaaaatgacttttctgatgaagttaacactataatatcaaaaatgttgtgagtaacaccccactgtttgtacaat 36695060  T
Q  344 gacattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    ||||| ||||||||| ||  ||||||||||||||||||||    
T  36695059 gacatcaaaagttcagtccccatagtatcatcaattcatc 36695020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 245 - 383
Target Start/End: Complemental strand, 27083030 - 27082892
Alignment:
Q  245 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatg 344  Q
    ||||||||| ||||||||||| || ||| ||||||||  | |||||||||||||||| |||||||| |||| |||||||||||||| ||||||| || ||    
T  27083030 aggaaaattctatggtgaagtcatcagactgacttttctggtgaagttaacactatagcatcaaaagtgtagtgagtaacaccccactgtttgtgcagtg 27082931  T
Q  345 acattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
     ||||||||||||| || |||||||||||||||||||||    
T  27082930 gcattaaaagttcagtcctcatagtatcatcaattcatc 27082892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 242 - 383
Target Start/End: Original strand, 34894962 - 34895103
Alignment:
Q  242 taaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtaca 341  Q
    |||||||||||| ||||||||||| || | ||||||||||  ||||||||||||||||||||||||| | |||| |||||||||| ||| |||||||| |    
T  34894962 taaaggaaaattctatggtgaagtcatgaaaatgacttttctgatgaagttaacactataacatcaacactgtagtgagtaacactccactgtttgtaaa 34895061  T
Q  342 atgacattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
     || ||| ||||||||| |||||||| |||||||||||||||    
T  34895062 gtggcatcaaaagttcagtcatcatactatcatcaattcatc 34895103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 258 - 382
Target Start/End: Complemental strand, 23854610 - 23854486
Alignment:
Q  258 ggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagttc 357  Q
    |||||||| || ||||||||||||| | |||||||||||||||||||| |||| ||||||||||||||||| | ||||||| ||||||||| ||||||||    
T  23854610 ggtgaagtcatgagaatgacttttttggtgaagttaacactataacataaaaaatgtaatgagtaacacccaactgtttgtgcaatgacatcaaaagttc 23854511  T
Q  358 aatcatcatagtatcatcaattcat 382  Q
    | || ||||||||||||||| ||||    
T  23854510 agtcctcatagtatcatcaactcat 23854486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 245 - 383
Target Start/End: Complemental strand, 16447067 - 16446929
Alignment:
Q  245 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatg 344  Q
    ||||||||| ||||||||||| || | ||||||||||  ||| |||||||||||||||||||||||||||| |||||||||||||| |||||||| ||||    
T  16447067 aggaaaattctatggtgaagtcatgaaaatgacttttctgataaagttaacactataacatcaaaattgtagtgagtaacaccccactgtttgtataatg 16446968  T
Q  345 acattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
     ||| ||||||| | ||  |||| |||||||||||||||    
T  16446967 gcatcaaaagtttagtccccatactatcatcaattcatc 16446929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 259 - 383
Target Start/End: Complemental strand, 31934064 - 31933940
Alignment:
Q  259 gtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagttca 358  Q
    |||||||||| ||||||| ||||| | ||||||||||||||| | ||||||| | ||||||||||||||||| | ||| ||||||||||| |||||||||    
T  31934064 gtgaagttatgagaatgatttttttggtgaagttaacactatgatatcaaaaatataatgagtaacaccccactctttatacaatgacatcaaaagttca 31933965  T
Q  359 atcatcatagtatcatcaattcatc 383  Q
     |||| |||||||||||||||||||    
T  31933964 gtcattatagtatcatcaattcatc 31933940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 246 - 383
Target Start/End: Original strand, 12876108 - 12876245
Alignment:
Q  246 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 345  Q
    |||||||| |||||| |||| |  | ||||||||||  ||||||||||||||||||| || |||| |||  |||||||||||| | ||||||||||||||    
T  12876108 ggaaaattctatggttaagtcacgaaaatgacttttctgatgaagttaacactataatataaaaaatgttgtgagtaacacccaactgtttgtacaatga 12876207  T
Q  346 cattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    ||| ||||||||| || |||||||||||||||||||||    
T  12876208 catcaaaagttcagtcctcatagtatcatcaattcatc 12876245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 239 - 383
Target Start/End: Complemental strand, 6098716 - 6098572
Alignment:
Q  239 aaataaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgt 338  Q
    |||||| |||||||| ||||||||||| || | ||| ||||||| | ||||||||| |||||| |||||||| | || |||||||||||||| |||||||    
T  6098716 aaataatggaaaattctatggtgaagtcatgaaaataacttttttggtgaagttaatactatagcatcaaaaatatagtgagtaacaccccactgtttgt 6098617  T
Q  339 acaatgacattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    ||| |||||| ||||||||| ||  ||||||||| ||||||||||    
T  6098616 acagtgacatcaaaagttcagtccccatagtatcgtcaattcatc 6098572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 244 - 383
Target Start/End: Original strand, 38643975 - 38644114
Alignment:
Q  244 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaat 343  Q
    |||||||||| ||||||||| | || ||||||||||||| | | ||||||||||||||||||||||| |||  |||||||||||||| |||||||  | |    
T  38643975 aaggaaaattctatggtgaaatcatgagaatgacttttttggtcaagttaacactataacatcaaaagtgttgtgagtaacaccccactgtttgtctagt 38644074  T
Q  344 gacattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    | ||| ||||||||| ||  ||||||||||||||||||||    
T  38644075 ggcatcaaaagttcagtctccatagtatcatcaattcatc 38644114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 246 - 383
Target Start/End: Original strand, 13307622 - 13307759
Alignment:
Q  246 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 345  Q
    |||||||| ||||||||||| || ||||||| ||||  | ||||||||||||||||||||||||| |||  ||||||||||| || | |||||||| |||    
T  13307622 ggaaaattctatggtgaagtcatgagaatgatttttctggtgaagttaacactataacatcaaaagtgttgtgagtaacacctcactatttgtacagtga 13307721  T
Q  346 cattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    ||| ||||||||| ||  |||||||| |||||||||||    
T  13307722 catcaaaagttcagtccccatagtattatcaattcatc 13307759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 248 - 383
Target Start/End: Original strand, 465843 - 465978
Alignment:
Q  248 aaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgaca 347  Q
    |||||||||||||||||| || | ||||||||||  | |||||||||||| |||||||||||| |||  |||||||||||||| |||||||||| || ||    
T  465843 aaaattttatggtgaagtcattaaaatgacttttgtggtgaagttaacacgataacatcaaaagtgttgtgagtaacaccccactgtttgtacagtggca 465942  T
Q  348 ttaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    | |||| |||| ||  | ||||||||||||||||||    
T  465943 tcaaaaattcagtccccttagtatcatcaattcatc 465978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 246 - 383
Target Start/End: Complemental strand, 5300137 - 5300000
Alignment:
Q  246 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 345  Q
    |||||||| ||||||||||| || |||||||||||||  ||||||||||||||||| |||||||| |||  | |||| ||| | | |||||||||| ||     
T  5300137 ggaaaattctatggtgaagtcatgagaatgacttttttaatgaagttaacactatagcatcaaaagtgttgtaagtagcactctactgtttgtacagtgg 5300038  T
Q  346 cattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    ||| ||||||||| || | |||||||||||||||||||    
T  5300037 catcaaaagttcagtccttatagtatcatcaattcatc 5300000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 245 - 358
Target Start/End: Complemental strand, 8803998 - 8803889
Alignment:
Q  245 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatg 344  Q
    ||||||||| ||||||||||| |||    ||||||||| | ||||||||||||||||||||||||| ||||||||||||||| ||| | |||||| ||||    
T  8803998 aggaaaattctatggtgaagtcata----tgacttttttggtgaagttaacactataacatcaaaaatgtaatgagtaacactccactatttgtagaatg 8803903  T
Q  345 acattaaaagttca 358  Q
    |||| |||||||||    
T  8803902 acatcaaaagttca 8803889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 243 - 383
Target Start/End: Original strand, 9864144 - 9864284
Alignment:
Q  243 aaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaa 342  Q
    ||||||||||| |||  |||||| |  | ||||||||||| | |||| |||||||||||  ||||||| |||  |||||||||||||| |||||||||||    
T  9864144 aaaggaaaattctataatgaagtcacgaaaatgacttttttggtgaaattaacactatagtatcaaaaatgttgtgagtaacaccccactgtttgtacaa 9864243  T
Q  343 tgacattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    |||||| ||||||||| ||  |||| |||||||||||||||    
T  9864244 tgacatcaaaagttcagtccccataatatcatcaattcatc 9864284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 260 - 383
Target Start/End: Original strand, 11727037 - 11727160
Alignment:
Q  260 tgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagttcaa 359  Q
    ||||||||| ||||||| ||||| | ||||||||||||||||||||||||| |||  | |||||||||||| | |||||| | || ||| |||||||||     
T  11727037 tgaagttatgagaatgatttttttggtgaagttaacactataacatcaaaagtgttgtaagtaacaccccactatttgtatagtggcatcaaaagttcag 11727136  T
Q  360 tcatcatagtatcatcaattcatc 383  Q
    || ||||| |||||||||||||||    
T  11727137 tcctcataatatcatcaattcatc 11727160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 244 - 383
Target Start/End: Original strand, 16222860 - 16222999
Alignment:
Q  244 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaat 343  Q
    |||||||||| || |||||| | || ||||||||||||  | |||| ||||||||||||||| |||| | || ||||||   |||||  |||||||||||    
T  16222860 aaggaaaattctacggtgaaatcatgagaatgacttttctggtgaatttaacactataacataaaaaatatagtgagtagttccccacagtttgtacaat 16222959  T
Q  344 gacattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    ||||| ||||||||| || |||||||||||||||||||||    
T  16222960 gacatcaaaagttcagtcctcatagtatcatcaattcatc 16222999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 246 - 383
Target Start/End: Original strand, 41362517 - 41362651
Alignment:
Q  246 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 345  Q
    |||||||| |||||||||||||| | ||||||||||| | ||||||||||||||   ||| ||||| ||| |||||||||||||| | |||||| | |||    
T  41362517 ggaaaattctatggtgaagttatgaaaatgacttttttggtgaagttaacactag--cataaaaat-gtagtgagtaacaccccactatttgtatagtga 41362613  T
Q  346 cattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    ||| |||||||||  | |||||||||||||||||||||    
T  41362614 catcaaaagttcagacctcatagtatcatcaattcatc 41362651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 246 - 310
Target Start/End: Original strand, 15009241 - 15009305
Alignment:
Q  246 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaa 310  Q
    |||||||| ||||||||||| |||||||||||||||| | |||||||||||||||||||||||||    
T  15009241 ggaaaattctatggtgaagtcataagaatgacttttttggtgaagttaacactataacatcaaaa 15009305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 246 - 379
Target Start/End: Original strand, 44869495 - 44869629
Alignment:
Q  246 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatg--agtaacaccccaatgtttgtacaat 343  Q
    |||||||| || |||||| |||||||||| ||||||| | |||||||||||||||||||| |||| | |  ||  ||| |  ||||| |||||| |||||    
T  44869495 ggaaaattctacggtgaaattataagaataacttttttggtgaagttaacactataacattaaaagtattttgtgagtgat-ccccactgtttgcacaat 44869593  T
Q  344 gacattaaaagttcaatcatcatagtatcatcaatt 379  Q
    ||||| |||||||||||| |||||||||||||||||    
T  44869594 gacatcaaaagttcaatcgtcatagtatcatcaatt 44869629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 245 - 383
Target Start/End: Complemental strand, 34952223 - 34952085
Alignment:
Q  245 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatg 344  Q
    ||||||||| ||| || |||| || | ||||||||||  | | |||||||||||||| |||||||| |||  ||||||||| |||| |||||||||| ||    
T  34952223 aggaaaattctatagtaaagtcattaaaatgacttttctggtcaagttaacactatatcatcaaaagtgttgtgagtaacagcccactgtttgtacagtg 34952124  T
Q  345 acattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    |||| ||||||||| ||    ||||||||||||||||||    
T  34952123 acatcaaaagttcagtccctttagtatcatcaattcatc 34952085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 307 - 383
Target Start/End: Complemental strand, 1149762 - 1149686
Alignment:
Q  307 aaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    |||| |||||||||||||| |||| ||||||||||||||||| ||||||||  || ||||||||||||||| |||||    
T  1149762 aaaaatgtaatgagtaacaacccactgtttgtacaatgacatcaaaagttctgtcctcatagtatcatcaactcatc 1149686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 244 - 379
Target Start/End: Original strand, 40862416 - 40862551
Alignment:
Q  244 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaat-tgtaatgagtaacaccccaatgtttgtacaa 342  Q
    |||||||||| ||| ||||||| |  | ||| ||||||  | ||||||||||||||||| |||||||  |||  |||||||||||||| |||||||||||    
T  40862416 aaggaaaattctatagtgaagtcacgaaaataacttttctggtgaagttaacactataatatcaaaaaatgttgtgagtaacaccccactgtttgtacaa 40862515  T
Q  343 tgacattaaaagttcaatcatcatagtatcatcaatt 379  Q
    || ||| ||||||||| || |||| ||||||||||||    
T  40862516 tggcatcaaaagttcagtc-tcatggtatcatcaatt 40862551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 244 - 330
Target Start/End: Complemental strand, 24823465 - 24823379
Alignment:
Q  244 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacacccca 330  Q
    |||||||||  |||||| ||||||| ||||||||||||| | ||||||||||||||||| ||||||| ||| | | |||||||||||    
T  24823465 aaggaaaatactatggtaaagttatgagaatgacttttttggtgaagttaacactataatatcaaaagtgttaagtgtaacacccca 24823379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 248 - 383
Target Start/End: Complemental strand, 7891137 - 7891011
Alignment:
Q  248 aaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgaca 347  Q
    |||||| ||||||||||| || |||||||||||||   ||||||||||||||||||||||||         | |||||| |||  |||||||||||| ||    
T  7891137 aaaattctatggtgaagtcatgagaatgactttttttgtgaagttaacactataacatcaaa---------aataacactccaccgtttgtacaatggca 7891047  T
Q  348 ttaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    | ||||||||  || ||||| |||||||||||||||    
T  7891046 tcaaaagttcggtcctcataatatcatcaattcatc 7891011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 246 - 336
Target Start/End: Original strand, 33906223 - 33906313
Alignment:
Q  246 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgttt 336  Q
    |||||||| ||||||||| |||| ||||||||||||  | |||||| |||||||||  || |||| |||| |||||| ||||||| |||||    
T  33906223 ggaaaattctatggtgaaattatgagaatgacttttctggtgaagtcaacactatagtattaaaagtgtagtgagtagcaccccactgttt 33906313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 246 - 299
Target Start/End: Complemental strand, 4133199 - 4133146
Alignment:
Q  246 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacacta 299  Q
    ||||||||||||||| |||| || ||||||||||||| | ||||||||||||||    
T  4133199 ggaaaattttatggtcaagtcatcagaatgacttttttggtgaagttaacacta 4133146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 237 - 294
Target Start/End: Original strand, 34685728 - 34685785
Alignment:
Q  237 taaaataaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaa 294  Q
    |||||| |||||||||| |||| ||||||||| ||||||| ||||| |||||||||||    
T  34685728 taaaatgaaggaaaattctatgatgaagttatgagaatgaattttttgatgaagttaa 34685785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 282
Target Start/End: Complemental strand, 4108972 - 4108924
Alignment:
Q  234 caataaaataaaggaaaattttatggtgaagttataagaatgacttttt 282  Q
    |||||||| ||||||||||||||||||||||| || | |||||||||||    
T  4108972 caataaaagaaaggaaaattttatggtgaagtcatgaaaatgacttttt 4108924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 335 - 383
Target Start/End: Complemental strand, 35459813 - 35459765
Alignment:
Q  335 ttgtacaatgacattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    |||||||||||||||||||||||| || ||||| ||||||||| |||||    
T  35459813 ttgtacaatgacattaaaagttcagtcctcataatatcatcaactcatc 35459765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 242 - 383
Target Start/End: Complemental strand, 39099304 - 39099173
Alignment:
Q  242 taaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaa-ttgtaatgagtaacaccccaatgtttgtac 340  Q
    |||||||||||| ||||||||||| || ||||||||||||  |||||        |||||||||||||| ||| ||   ||||||||||| | |||||||    
T  39099304 taaaggaaaattctatggtgaagtcatgagaatgacttttctgatga--------ctataacatcaaaagttgcaa---gtaacaccccactctttgtac 39099216  T
Q  341 aatgacattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    | |  ||| ||||||||| || |||||||||| ||||||||||    
T  39099215 actagcatcaaaagttcagtcctcatagtatcgtcaattcatc 39099173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 88; Significance: 3e-42; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 243 - 382
Target Start/End: Complemental strand, 4319010 - 4318871
Alignment:
Q  243 aaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaa 342  Q
    ||||||||||| ||||||||||| || ||||||||||||| | ||||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||     
T  4319010 aaaggaaaattctatggtgaagtcatgagaatgacttttttggtgaagttaacactataacatcaaaagtgttatgagtaacaccccactgtttgtacag 4318911  T
Q  343 tgacattaaaagttcaatcatcatagtatcatcaattcat 382  Q
    |||||| |||||||||| |  |||||||||||||||||||    
T  4318910 tgacatcaaaagttcaacccccatagtatcatcaattcat 4318871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 244 - 383
Target Start/End: Original strand, 1945831 - 1945971
Alignment:
Q  244 aaggaaaattttatggtgaagttataagaatgactttttg-gatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaa 342  Q
    |||||||||| || |||||||| ||||||||||||||||  | ||||||||||||||||||||||||| ||||||||||||||||||| |||||||| ||    
T  1945831 aaggaaaattctacggtgaagtcataagaatgactttttttggtgaagttaacactataacatcaaaaatgtaatgagtaacaccccactgtttgtagaa 1945930  T
Q  343 tgacattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    |||||| |||||||||  | |||||||||||| ||||||||    
T  1945931 tgacatcaaaagttcagccctcatagtatcatgaattcatc 1945971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 244 - 383
Target Start/End: Original strand, 5627389 - 5627528
Alignment:
Q  244 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaat 343  Q
    |||||||||| || |||||||| |||||||||||||||| | |||||||||||||||||||| |||| | ||||||||||||||||| | |||||| |||    
T  5627389 aaggaaaattctaaggtgaagtcataagaatgacttttttggtgaagttaacactataacataaaaaatataatgagtaacaccccactatttgtagaat 5627488  T
Q  344 gacattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    ||||| |||||||||  | ||||||||| |||||||||||    
T  5627489 gacatcaaaagttcagccctcatagtattatcaattcatc 5627528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 245 - 383
Target Start/End: Complemental strand, 7055400 - 7055262
Alignment:
Q  245 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatg 344  Q
    ||||||||||||||||||||| |||||||||| ||||| | |||||||||||||||||||| |||| | |||| ||||||||| || | |||||| ||||    
T  7055400 aggaaaattttatggtgaagtcataagaatgatttttttggtgaagttaacactataacataaaaaatataattagtaacacctcactatttgtagaatg 7055301  T
Q  345 acattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    |||| |||||||||  | |||||||||||||||||||||    
T  7055300 acatcaaaagttcagccctcatagtatcatcaattcatc 7055262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 245 - 383
Target Start/End: Original strand, 8513232 - 8513370
Alignment:
Q  245 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatg 344  Q
    ||||||||| ||||||||||| || ||||||||||||  | ||||||||||||||||| ||||||| |||  |||||||||||||| |||||||||| ||    
T  8513232 aggaaaattctatggtgaagtcatgagaatgacttttctggtgaagttaacactataatatcaaaagtgttgtgagtaacaccccactgtttgtacagtg 8513331  T
Q  345 acattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    |||| ||||||||| ||  |||| |||||||||||||||    
T  8513332 acatcaaaagttcagtccccataatatcatcaattcatc 8513370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 239 - 383
Target Start/End: Original strand, 29182156 - 29182300
Alignment:
Q  239 aaataaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgt 338  Q
    |||| ||| |||||||||||||||||| || ||||||| ||| | ||||||||||||||||||||||||||| |||  |||||||||||||| ||||| |    
T  29182156 aaattaagaaaaattttatggtgaagtcatgagaatgattttattgatgaagttaacactataacatcaaaagtgttgtgagtaacaccccactgtttat 29182255  T
Q  339 acaatgacattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    ||| || ||| ||||||||| ||  |||| |||||||||||||||    
T  29182256 acagtgtcatcaaaagttcagtctccatattatcatcaattcatc 29182300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 245 - 383
Target Start/End: Complemental strand, 3880124 - 3879986
Alignment:
Q  245 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatg 344  Q
    ||||||||| ||||||||||| |  ||||||||||||  | ||||||||||| ||||  ||||||| |||  |||||||||||| | |||||||||||||    
T  3880124 aggaaaattctatggtgaagtcacgagaatgacttttctggtgaagttaacattatagtatcaaaagtgttgtgagtaacaccctactgtttgtacaatg 3880025  T
Q  345 acattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    |||| ||||||||||||  ||||||||||||||||||||    
T  3880024 acatcaaaagttcaatccccatagtatcatcaattcatc 3879986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 246 - 383
Target Start/End: Complemental strand, 7235218 - 7235082
Alignment:
Q  246 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 345  Q
    |||||||| |||||||||||||| ||||||||||||  | |||||| |||||||||||||||||| |||| |||||| ||||||| |||||||||  ||     
T  7235218 ggaaaattctatggtgaagttatgagaatgacttttccggtgaagtcaacactataacatcaaaagtgtagtgagtagcaccccactgtttgtacggtgc 7235119  T
Q  346 cattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    ||| ||||||||| || ||||||||| |||||||||||    
T  7235118 catcaaaagttcagtc-tcatagtattatcaattcatc 7235082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 246 - 383
Target Start/End: Complemental strand, 33893186 - 33893050
Alignment:
Q  246 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 345  Q
    |||||||| |||||| |||| || ||||| | |||||   ||||||||||||||||||||||||| |||  |||||||||||||| | ||||||||||||    
T  33893186 ggaaaattctatggtaaagtcattagaataatttttttagtgaagttaacactataacatcaaaagtgttgtgagtaacaccccactatttgtacaatga 33893087  T
Q  346 cattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
     |||||||||||| ||  | ||||||||||||||||||    
T  33893086 tattaaaagttcagtc-ccttagtatcatcaattcatc 33893050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 248 - 383
Target Start/End: Original strand, 6088910 - 6089045
Alignment:
Q  248 aaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgaca 347  Q
    |||||| ||||||||||| || ||||||| ||||  | ||||||||||||||||  ||||||| |||  |||||||| ||||| |||||||| | || ||    
T  6088910 aaaattctatggtgaagtcatgagaatgatttttctggtgaagttaacactatagtatcaaaagtgttgtgagtaacgccccactgtttgtaaagtggca 6089009  T
Q  348 ttaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    | ||||||||| ||| ||||||||||||||||||||    
T  6089010 tcaaaagttcagtcaccatagtatcatcaattcatc 6089045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 262 - 383
Target Start/End: Original strand, 15491631 - 15491752
Alignment:
Q  262 aagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagttcaatc 361  Q
    ||||||| ||||||||||||    ||||||||||| | ||||||||||| |||  |||||||||||||| | |||||||| || ||| |||||||||  |    
T  15491631 aagttatgagaatgacttttctcgtgaagttaacattgtaacatcaaaagtgttgtgagtaacaccccactatttgtacagtggcatcaaaagttcagcc 15491730  T
Q  362 atcatagtatcatcaattcatc 383  Q
     |||||||||||||||||||||    
T  15491731 ctcatagtatcatcaattcatc 15491752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 243 - 377
Target Start/End: Original strand, 18498430 - 18498565
Alignment:
Q  243 aaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaaca-ccccaatgtttgtaca 341  Q
    ||||||||| | ||| ||||||| || |||||||||||   | ||||||||||| |||| |||||||| |||| |||| |||| |||||  |||||||||    
T  18498430 aaaggaaaaatctatagtgaagtcatgagaatgactttcctggtgaagttaacattatagcatcaaaagtgtagtgagcaacacccccacagtttgtaca 18498529  T
Q  342 atgacattaaaagttcaatcatcatagtatcatcaa 377  Q
     || ||| ||||||||| || |||||||||||||||    
T  18498530 gtggcatcaaaagttcagtcctcatagtatcatcaa 18498565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 272 - 383
Target Start/End: Complemental strand, 21017270 - 21017159
Alignment:
Q  272 aatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagttcaatcatcatagtat 371  Q
    ||||||||||| | ||||||||||| | ||  || |||| |||  |||||||||||||| | ||||||||||| ||| ||||||||| ||  ||||||||    
T  21017270 aatgacttttttggtgaagttaacattgtagtataaaaaatgttgtgagtaacaccccattatttgtacaatggcatcaaaagttcagtccccatagtat 21017171  T
Q  372 catcaattcatc 383  Q
    ||||||||||||    
T  21017170 catcaattcatc 21017159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 248 - 383
Target Start/End: Complemental strand, 30353540 - 30353405
Alignment:
Q  248 aaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgaca 347  Q
    |||||| ||||||||||| || ||||||||||||  | ||||||||||| ||||||||||||| |||   |||||| | | || |||||||||| || ||    
T  30353540 aaaattctatggtgaagtcatgagaatgacttttctggtgaagttaacattataacatcaaaagtgttgcgagtaatatctcactgtttgtacagtggca 30353441  T
Q  348 ttaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    |  | |||||| ||  ||||||||||||||||||||    
T  30353440 tcgatagttcagtctccatagtatcatcaattcatc 30353405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 247 - 383
Target Start/End: Original strand, 20768087 - 20768221
Alignment:
Q  247 gaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgac 346  Q
    ||||||| ||||||||||| || ||||||||||||  | |||||| ||||||||| |||||||| |||| |||||| ||  ||| |||||||  | || |    
T  20768087 gaaaattctatggtgaagtcatgagaatgacttttctggtgaagtcaacactatagcatcaaaagtgtagtgagtagca-tccattgtttgt-tagtggc 20768184  T
Q  347 attaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    || ||||||||| || |||||||||||| ||||||||    
T  20768185 atcaaaagttcagtcctcatagtatcattaattcatc 20768221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 300 - 382
Target Start/End: Complemental strand, 6091313 - 6091231
Alignment:
Q  300 taacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagttcaatcatcatagtatcatcaattcat 382  Q
    |||||| |||| |||| |||||||||| ||| ||||||||||||| ||| ||||||||| |  || |||||||||||||||||    
T  6091313 taacataaaaaatgtagtgagtaacacaccattgtttgtacaatgccatcaaaagttcagtactcgtagtatcatcaattcat 6091231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 383
Target Start/End: Original strand, 33618874 - 33618971
Alignment:
Q  286 tgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    |||||| ||||||||  |||||||| |||| |||||| || |||| | |||||||  || ||| ||||||||| |  |||||||||||||||||||||    
T  33618874 tgaagtcaacactatcgcatcaaaagtgtagtgagtagcaacccattatttgtacggtggcatcaaaagttcagttctcatagtatcatcaattcatc 33618971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 294
Target Start/End: Original strand, 19631747 - 19631797
Alignment:
Q  244 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaa 294  Q
    |||||||||| ||||||||||| |||||||||||||||  | |||||||||    
T  19631747 aaggaaaattctatggtgaagtcataagaatgacttttctggtgaagttaa 19631797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 86; Significance: 5e-41; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 246 - 383
Target Start/End: Original strand, 37905709 - 37905845
Alignment:
Q  246 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 345  Q
    |||||||| |||||||||||||||| ||||| ||||||| |||||||||||||||||||| |||| ||||| |||||||||||||  |||||||||||||    
T  37905709 ggaaaattctatggtgaagttataaaaatgattttttgg-tgaagttaacactataacataaaaaatgtaacgagtaacaccccaccgtttgtacaatga 37905807  T
Q  346 cattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    ||| ||||||||| || |||||||||||||||||||||    
T  37905808 catcaaaagttcagtcctcatagtatcatcaattcatc 37905845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 246 - 383
Target Start/End: Complemental strand, 33551189 - 33551052
Alignment:
Q  246 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 345  Q
    |||||||| || |||||||| || |||||||||||||   ||||||||||||||||||||||||| |||| |||||||||||||| ||||||||||||||    
T  33551189 ggaaaattctacggtgaagtcatgagaatgacttttttagtgaagttaacactataacatcaaaaatgtagtgagtaacaccccactgtttgtacaatga 33551090  T
Q  346 cattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    ||| ||||||||  || |||||||||||||||||||||    
T  33551089 catcaaaagttcggtcttcatagtatcatcaattcatc 33551052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 245 - 383
Target Start/End: Complemental strand, 11366585 - 11366447
Alignment:
Q  245 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatg 344  Q
    ||||||||| ||||||||| | |||||||||||||||| | |||| |||||||||||||||||||| |||||||||||||| | || | |||||| ||||    
T  11366585 aggaaaattctatggtgaaatcataagaatgacttttttggtgaaattaacactataacatcaaaaatgtaatgagtaacatctcactatttgtataatg 11366486  T
Q  345 acattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    |||| |||||||||  | |||||||||||||||||||||    
T  11366485 acatcaaaagttcagccctcatagtatcatcaattcatc 11366447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 277 - 383
Target Start/End: Complemental strand, 43648416 - 43648311
Alignment:
Q  277 ctttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagttcaatcatcatagtatcatca 376  Q
    |||||||| ||||||||||||||||||||||||| |||||||||||||||| || |||||||| |||||||| ||||||||| |||||||||||||||||    
T  43648416 ctttttgg-tgaagttaacactataacatcaaaaatgtaatgagtaacacctcactgtttgtataatgacatcaaaagttcagtcatcatagtatcatca 43648318  T
Q  377 attcatc 383  Q
    | |||||    
T  43648317 actcatc 43648311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 243 - 383
Target Start/End: Complemental strand, 19289524 - 19289389
Alignment:
Q  243 aaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaa 342  Q
    ||||||||||| ||||||||||| |     |||||||||| ||||||||||||||||||||||||||| | ||||||||||||||||| |||||||||||    
T  19289524 aaaggaaaattctatggtgaagtca-----atgacttttttgatgaagttaacactataacatcaaaaatataatgagtaacaccccattgtttgtacaa 19289430  T
Q  343 tgacattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    |||||| ||||||| | |  ||| ||||||||||| |||||    
T  19289429 tgacatcaaaagttaagttctcacagtatcatcaactcatc 19289389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 246 - 358
Target Start/End: Original strand, 26357577 - 26357689
Alignment:
Q  246 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 345  Q
    |||||||||||||||||||| || | ||||||||||  ||||||||||||||||||||||||||| |||| ||||||||| |||| |||||||||| |||    
T  26357577 ggaaaattttatggtgaagtcatgaaaatgacttttctgatgaagttaacactataacatcaaaactgtagtgagtaacatcccactgtttgtacagtga 26357676  T
Q  346 cattaaaagttca 358  Q
    ||| |||||||||    
T  26357677 catcaaaagttca 26357689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 248 - 383
Target Start/End: Original strand, 3176941 - 3177076
Alignment:
Q  248 aaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgaca 347  Q
    |||||| |||||||||||||  | ||||||||||  ||||||||||| ||||||| ||||||| |||  |||||||||| | | ||||||||||||||||    
T  3176941 aaaattctatggtgaagttacgaaaatgacttttctgatgaagttaatactataatatcaaaaatgttttgagtaacacgcaactgtttgtacaatgaca 3177040  T
Q  348 ttaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    | ||||||||| || |||||||||||||||||||||    
T  3177041 tcaaaagttcagtcctcatagtatcatcaattcatc 3177076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 243 - 377
Target Start/End: Complemental strand, 2325576 - 2325442
Alignment:
Q  243 aaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaa 342  Q
    ||||||||||| ||||||||||||||  |||||||||||    ||||||||||| |||||||||| || |||| |||||||||||||| ||||||||||     
T  2325576 aaaggaaaattctatggtgaagttatgtgaatgacttttctcgtgaagttaacaatataacatcataaatgtattgagtaacaccccattgtttgtacac 2325477  T
Q  343 tgacattaaaagttcaatcatcatagtatcatcaa 377  Q
    || ||| ||||||||| || |||||||||||||||    
T  2325476 tggcatcaaaagttcagtcctcatagtatcatcaa 2325442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 245 - 383
Target Start/End: Complemental strand, 19424832 - 19424694
Alignment:
Q  245 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatg 344  Q
    ||||||||||||||||||||| || |||||| |||||  | ||||||||||||||||||||||||| |||  |||||||||||||| ||||| || | ||    
T  19424832 aggaaaattttatggtgaagtcatgagaatggcttttctggtgaagttaacactataacatcaaaagtgttgtgagtaacaccccattgtttatatagtg 19424733  T
Q  345 acattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
     ||| ||||||| | || |||||||||||||||||||||    
T  19424732 gcatcaaaagtttagtcctcatagtatcatcaattcatc 19424694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 244 - 382
Target Start/End: Complemental strand, 39167568 - 39167430
Alignment:
Q  244 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaat 343  Q
    |||||||||||||||||||||| |  ||||||| ||||| |||||||||||||  |||  ||||||| | |  ||||||||||| || ||||||||||||    
T  39167568 aaggaaaattttatggtgaagtcacgagaatgatttttttgatgaagttaacagaatagtatcaaaagtattgtgagtaacacctcactgtttgtacaat 39167469  T
Q  344 gacattaaaagttcaatcatcatagtatcatcaattcat 382  Q
    ||||| ||||||||| || ||||||||||||||||||||    
T  39167468 gacatcaaaagttcagtcctcatagtatcatcaattcat 39167430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 246 - 358
Target Start/End: Original strand, 35958909 - 35959021
Alignment:
Q  246 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 345  Q
    |||||||| |||| |||||| |||| ||||||||||| | |||||||  ||||||||||| |||| ||||||||| ||||||||| ||||||||||||||    
T  35958909 ggaaaattctatgatgaagtcataaaaatgacttttttggtgaagttgccactataacataaaaaatgtaatgagcaacaccccactgtttgtacaatga 35959008  T
Q  346 cattaaaagttca 358  Q
    |||||||||||||    
T  35959009 cattaaaagttca 35959021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 248 - 383
Target Start/End: Complemental strand, 41464051 - 41463916
Alignment:
Q  248 aaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgaca 347  Q
    |||||| |||||||||||  | |||||||| |||| | ||||||||| ||||||| ||||||| |||  ||||||||||| || |||||||||| || ||    
T  41464051 aaaattctatggtgaagtcgtgagaatgacatttttggtgaagttaatactataaaatcaaaagtgttgtgagtaacacctcactgtttgtacagtggca 41463952  T
Q  348 ttaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    | |||||||||||| |||||||||||||||||||||    
T  41463951 tcaaaagttcaatcctcatagtatcatcaattcatc 41463916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 245 - 383
Target Start/End: Complemental strand, 17071941 - 17071803
Alignment:
Q  245 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatg 344  Q
    ||||||||| ||||||||||| ||  |||||||||||| | ||||||||||||||||||| ||||| |||| | ||||||| | || | |||||||||||    
T  17071941 aggaaaattctatggtgaagtcatgcgaatgacttttttggtgaagttaacactataacaacaaaaatgtagtaagtaacatctcattatttgtacaatg 17071842  T
Q  345 acattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    |||| ||||||||  |  |||||||||||||||||||||    
T  17071841 acatcaaaagttcggtattcatagtatcatcaattcatc 17071803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 245 - 383
Target Start/End: Complemental strand, 17054300 - 17054162
Alignment:
Q  245 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatg 344  Q
    ||||||||| ||||||||||| ||  |||||||||||| | ||||||||| ||||||||||||||| |||| | ||||||| | || |||||||||||||    
T  17054300 aggaaaattctatggtgaagtcatgcgaatgacttttttggtgaagttaatactataacatcaaaaatgtagtaagtaacatctcattgtttgtacaatg 17054201  T
Q  345 acattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    |||| |||||| |  |  ||||| |||||||||||||||    
T  17054200 acatcaaaagtncggtattcataatatcatcaattcatc 17054162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 248 - 383
Target Start/End: Original strand, 36641988 - 36642123
Alignment:
Q  248 aaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgaca 347  Q
    |||||| ||||||||||| || ||||||||||||  | |||| |||| |||||| |||||||| |||   |||||||||| || |||||||||| |||||    
T  36641988 aaaattctatggtgaagtcatgagaatgacttttctggtgaaattaatactatagcatcaaaagtgttgcgagtaacacctcactgtttgtacagtgaca 36642087  T
Q  348 ttaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    | ||||||||| || |||||||||||||||||||||    
T  36642088 tcaaaagttcagtcctcatagtatcatcaattcatc 36642123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 248 - 383
Target Start/End: Complemental strand, 43771039 - 43770905
Alignment:
Q  248 aaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgaca 347  Q
    |||||| ||||||||||| || ||||||| ||||||| ||||||||||||||||||||||||| |||  |||||||||||||| ||||| |||| || ||    
T  43771039 aaaattctatggtgaagtcattagaatgattttttgg-tgaagttaacactataacatcaaaagtgttgtgagtaacaccccactgtttatacagtggca 43770941  T
Q  348 ttaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    | ||||||||| ||  | || |||||||||||||||    
T  43770940 tcaaaagttcagtccccttaatatcatcaattcatc 43770905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 245 - 383
Target Start/End: Complemental strand, 4264281 - 4264143
Alignment:
Q  245 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatg 344  Q
    ||||||||| ||||||||||| || | ||||||||||  | | |||||||||||||| |||||||| |||  ||||||||| |||| |||||||||| ||    
T  4264281 aggaaaattctatggtgaagtcatcataatgacttttctggtaaagttaacactatagcatcaaaagtgttgtgagtaacatcccactgtttgtacagtg 4264182  T
Q  345 acattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    |||| ||||||||| ||  |||||||| |||||||||||    
T  4264181 acatcaaaagttcagtctccatagtattatcaattcatc 4264143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 247 - 383
Target Start/End: Original strand, 13711465 - 13711601
Alignment:
Q  247 gaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgac 346  Q
    ||||||| ||||||||||| || ||||||||||||  | ||||||||||| |||| |||||||| |||  ||||||||||||||  ||||||||| ||||    
T  13711465 gaaaattctatggtgaagtcatcagaatgacttttctggtgaagttaacattatagcatcaaaagtgttgtgagtaacaccccacagtttgtacagtgac 13711564  T
Q  347 attaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    || ||||||| | ||  ||| ||||||||||||||||    
T  13711565 atcaaaagtttagtccacatggtatcatcaattcatc 13711601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 244 - 383
Target Start/End: Complemental strand, 29242343 - 29242204
Alignment:
Q  244 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaat 343  Q
    |||||||||| ||||||||||| || | ||||  ||||| | ||||||||| |||||||||| |||| | || || ||||||||||| |||||||||| |    
T  29242343 aaggaaaattctatggtgaagtcatgaaaatggtttttttggtgaagttaaaactataacataaaaaatatagtgcgtaacaccccactgtttgtacagt 29242244  T
Q  344 gacattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    |  || ||||||||| || |||||||||||||||||||||    
T  29242243 ggtatcaaaagttcagtcttcatagtatcatcaattcatc 29242204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 246 - 383
Target Start/End: Original strand, 4478368 - 4478506
Alignment:
Q  246 ggaaaattttatggtgaagttata-agaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatg 344  Q
    |||||||| ||| ||||||| ||| | |||||  |||| | ||||||||||||||||||||||||| |||  |||||||||| ||| |||||||||| ||    
T  4478368 ggaaaattctatagtgaagtcatagaaaatgatatttttggtgaagttaacactataacatcaaaagtgttgtgagtaacactccattgtttgtacagtg 4478467  T
Q  345 acattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
     ||| ||||||| | || |||||||||||||||||||||    
T  4478468 gcatcaaaagtttagtcctcatagtatcatcaattcatc 4478506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 248 - 382
Target Start/End: Complemental strand, 33660569 - 33660435
Alignment:
Q  248 aaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgaca 347  Q
    |||||| ||||||||||| || | ||||||||||    | ||||||||||||||||||||||| |||  |||||||||||| | |||||||||| || ||    
T  33660569 aaaattctatggtgaagtcattaaaatgacttttctagttaagttaacactataacatcaaaagtgttgtgagtaacacccaactgtttgtacagtggca 33660470  T
Q  348 ttaaaagttcaatcatcatagtatcatcaattcat 382  Q
    | ||||||||| || || |||||||||||||||||    
T  33660469 tcaaaagttcagtcctcttagtatcatcaattcat 33660435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 244 - 383
Target Start/End: Original strand, 4166920 - 4167059
Alignment:
Q  244 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaat 343  Q
    |||||||||| ||||||||||| |  | ||||||||||  | ||||||||||| ||||  ||||||| | |  |||||||||||||| ||||||||||||    
T  4166920 aaggaaaattctatggtgaagtcacgaaaatgacttttctggtgaagttaacattatagtatcaaaaatattgtgagtaacaccccactgtttgtacaat 4167019  T
Q  344 gacattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    | ||| ||||||||| ||  |||||||||| |||||||||    
T  4167020 ggcatcaaaagttcagtccccatagtatcaacaattcatc 4167059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 245 - 383
Target Start/End: Complemental strand, 27350143 - 27350005
Alignment:
Q  245 aggaaaattttatggtgaagttataagaatgac-tttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaat 343  Q
    ||||||||||||||||||||| || | ||| |  ||||| | |||||||||||||||| |||||||| |||  ||||||||||| || |||||||||| |    
T  27350143 aggaaaattttatggtgaagtcattaaaataatattttttggtgaagttaacactatagcatcaaaaatgttgtgagtaacaccacactgtttgtacagt 27350044  T
Q  344 gacattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    ||||| ||||||||| ||  | ||||||||||||||||||    
T  27350043 gacatcaaaagttcagtc-ccttagtatcatcaattcatc 27350005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 244 - 383
Target Start/End: Complemental strand, 31570939 - 31570800
Alignment:
Q  244 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaat 343  Q
    |||||||||| |||||||||||||| ||||| ||||||  | |||| ||||||||||||||| |||| |||  | |||||||||||| | ||| || | |    
T  31570939 aaggaaaattctatggtgaagttatgagaataacttttctggtgaaattaacactataacattaaaagtgttgtaagtaacaccccactatttttatagt 31570840  T
Q  344 gacattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    ||||| ||||||||| ||  ||||||||||| ||||||||    
T  31570839 gacatcaaaagttcagtccacatagtatcatgaattcatc 31570800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 246 - 383
Target Start/End: Original strand, 4763628 - 4763768
Alignment:
Q  246 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaaca---ctataacatcaaaattgtaatgagtaacaccccaatgtttgtacaa 342  Q
    |||||||| |||| |||||| || | ||||||||||  |||||||||||||   ||||| || ||||| |||| |||||||||||||| ||||||||||     
T  4763628 ggaaaattctatgatgaagtcatgaaaatgacttttctgatgaagttaacaacactatatcaacaaaactgtagtgagtaacaccccactgtttgtacag 4763727  T
Q  343 tgacattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    |||||| ||||||||| |   |||||||| |||||||||||    
T  4763728 tgacatcaaaagttcagttcccatagtataatcaattcatc 4763768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 246 - 383
Target Start/End: Original strand, 33902068 - 33902203
Alignment:
Q  246 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 345  Q
    |||||||| |||| ||||||  | ||||||||||||  | ||||||||||||  |||||| |||| |||| ||||||| |||||| |||||||| |||||    
T  33902068 ggaaaattctatgatgaagtcgttagaatgacttttctggtgaagttaacac--taacataaaaaatgtagtgagtaataccccactgtttgtaaaatga 33902165  T
Q  346 cattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    ||| ||||||||| || ||| |||||||||| ||||||    
T  33902166 catcaaaagttcagtcctcaaagtatcatcagttcatc 33902203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 246 - 383
Target Start/End: Original strand, 19313852 - 19313988
Alignment:
Q  246 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 345  Q
    |||||||| ||||||||||| || ||||||||||||  | ||||||||||| |||| |||||||| |||  |||||||||||  | | ||| |||| |||    
T  19313852 ggaaaattctatggtgaagtcattagaatgacttttctggtgaagttaacattatagcatcaaaagtgttgtgagtaacaccttactatttatacagtga 19313951  T
Q  346 cattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    ||| ||||||||| || | |||||||||||||||||||    
T  19313952 catcaaaagttcagtcct-atagtatcatcaattcatc 19313988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 244 - 310
Target Start/End: Original strand, 41960881 - 41960947
Alignment:
Q  244 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaa 310  Q
    |||||||||| ||||||||||| |||  ||||||||||| |||||||||||||||||||||||||||    
T  41960881 aaggaaaattctatggtgaagtcatagaaatgacttttttgatgaagttaacactataacatcaaaa 41960947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 286 - 377
Target Start/End: Complemental strand, 33709395 - 33709304
Alignment:
Q  286 tgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagttcaatcatcatagtatcatcaa 377  Q
    ||||||||||||||||||||||||| |||   ||||||||| ||| |||| ||||| |||||| ||||||||| ||  ||||||||||||||    
T  33709395 tgaagttaacactataacatcaaaagtgttgcgagtaacactccactgttagtacagtgacatcaaaagttcagtccccatagtatcatcaa 33709304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 245 - 383
Target Start/End: Original strand, 5881533 - 5881676
Alignment:
Q  245 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaat-----tgtaatgagtaacaccccaatgtttgta 339  Q
    ||||||||||||| ||||||| || | ||||||||||  | ||||||| | | |||||||||||||      |||  |||||||||||||| ||||||||    
T  5881533 aggaaaattttattgtgaagtcattaaaatgacttttctggtgaagttgatattataacatcaaaacaaaagtgttgtgagtaacaccccactgtttgta 5881632  T
Q  340 caatgacattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    || |||||| ||||||| | ||  | ||||||||||||||||||    
T  5881633 cagtgacatcaaaagttgagtccccttagtatcatcaattcatc 5881676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 243 - 330
Target Start/End: Complemental strand, 18494474 - 18494387
Alignment:
Q  243 aaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacacccca 330  Q
    ||||||||||| | ||||||||| || | ||||||||||  | |||||||||||||||| |||||||| |||  ||||||||||||||    
T  18494474 aaaggaaaattctgtggtgaagtcatgaaaatgacttttctggtgaagttaacactatagcatcaaaagtgttgtgagtaacacccca 18494387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 246 - 383
Target Start/End: Original strand, 44913662 - 44913800
Alignment:
Q  246 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaat-gtttgtacaatg 344  Q
    |||||||| ||||||||||| |  | ||||||||||  | ||||||||||||| ||  ||||||| |||  ||||||||||| || | ||||||| ||||    
T  44913662 ggaaaattctatggtgaagtcacgaaaatgacttttatg-tgaagttaacactgtagtatcaaaaatgttgtgagtaacacctcacttgtttgtaaaatg 44913760  T
Q  345 acattaaaagttcaat-catcatagtatcatcaattcatc 383  Q
    |||| ||||||||||| |  ||||||||||||||||||||    
T  44913761 acataaaaagttcaatcccccatagtatcatcaattcatc 44913800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 246 - 328
Target Start/End: Original strand, 41465509 - 41465591
Alignment:
Q  246 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccc 328  Q
    |||||||| ||||||||||| || ||||||||||||  | |||||||||||||||| |||||||  |||| |||||| |||||    
T  41465509 ggaaaattctatggtgaagtcatgagaatgacttttctggtgaagttaacactatagcatcaaaggtgtagtgagtagcaccc 41465591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 246 - 312
Target Start/End: Original strand, 31861895 - 31861961
Alignment:
Q  246 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaatt 312  Q
    |||||||| |||||||||||||| ||||||||||||| | ||||||||| | ||| | |||||||||    
T  31861895 ggaaaattctatggtgaagttatgagaatgacttttttggtgaagttaatattatgatatcaaaatt 31861961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 294
Target Start/End: Complemental strand, 18514819 - 18514771
Alignment:
Q  246 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaa 294  Q
    |||||||||||| ||||||| || ||||||||||||| |||||||||||    
T  18514819 ggaaaattttatagtgaagtcatgagaatgacttttttgatgaagttaa 18514771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 281
Target Start/End: Complemental strand, 39788626 - 39788590
Alignment:
Q  245 aggaaaattttatggtgaagttataagaatgactttt 281  Q
    ||||||||||||||||||||| |||||||||||||||    
T  39788626 aggaaaattttatggtgaagtcataagaatgactttt 39788590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 343 - 383
Target Start/End: Original strand, 45327817 - 45327857
Alignment:
Q  343 tgacattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    |||||| ||||||||| ||||||||||||||||||||||||    
T  45327817 tgacatcaaaagttcagtcatcatagtatcatcaattcatc 45327857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 246 - 281
Target Start/End: Original strand, 22963400 - 22963435
Alignment:
Q  246 ggaaaattttatggtgaagttataagaatgactttt 281  Q
    |||||||||||||||||||| |||||||||||||||    
T  22963400 ggaaaattttatggtgaagtcataagaatgactttt 22963435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 246 - 281
Target Start/End: Complemental strand, 22998077 - 22998042
Alignment:
Q  246 ggaaaattttatggtgaagttataagaatgactttt 281  Q
    |||||||||||||||||||| |||||||||||||||    
T  22998077 ggaaaattttatggtgaagtcataagaatgactttt 22998042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 294
Target Start/End: Original strand, 19093407 - 19093461
Alignment:
Q  240 aataaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaa 294  Q
    |||||||||||||||||||||||||| || ||||||| ||||  | |||||||||    
T  19093407 aataaaggaaaattttatggtgaagtcatgagaatgatttttctggtgaagttaa 19093461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 245 - 293
Target Start/End: Complemental strand, 43446511 - 43446463
Alignment:
Q  245 aggaaaattttatggtgaagttataagaatgactttttggatgaagtta 293  Q
    ||||||||| ||||||||||| || ||||||||||||| | ||||||||    
T  43446511 aggaaaattctatggtgaagtcatgagaatgactttttcggtgaagtta 43446463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 85; Significance: 2e-40; HSPs: 56)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 242 - 383
Target Start/End: Original strand, 24886098 - 24886241
Alignment:
Q  242 taaaggaaaattttatggtgaagttataagaatgactttttg--gatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgta 339  Q
    |||||||||||||||||||||| | || |||||||||||||   | ||||||||| ||||||||||||||| ||||||||||||||||||| ||||||||    
T  24886098 taaaggaaaattttatggtgaaatcatgagaatgacttttttttggtgaagttaatactataacatcaaaaatgtaatgagtaacaccccactgtttgta 24886197  T
Q  340 caatgacattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    ||||||||| ||||||||| || ||||||||||||||| |||||    
T  24886198 caatgacatcaaaagttcagtcctcatagtatcatcaactcatc 24886241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 248 - 383
Target Start/End: Original strand, 699152 - 699287
Alignment:
Q  248 aaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgaca 347  Q
    ||||||||||||||||||||| ||||||||||||  |||||||||||||||||| ||| |||| | || |||||||||||||| |||||||||| |||||    
T  699152 aaaattttatggtgaagttatgagaatgacttttctgatgaagttaacactatagcataaaaaatctagtgagtaacaccccactgtttgtacagtgaca 699251  T
Q  348 ttaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    | ||||||||| |||||||| |||||||||||||||    
T  699252 tcaaaagttcagtcatcataatatcatcaattcatc 699287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 243 - 383
Target Start/End: Complemental strand, 22974260 - 22974120
Alignment:
Q  243 aaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaa 342  Q
    ||||||||||| |||||||||||||| ||||||| ||||| | |||||||||||||||||||||||||  ||||||||||||| |||| |||||||||||    
T  22974260 aaaggaaaattctatggtgaagttatgagaatgatttttttggtgaagttaacactataacatcaaaaaagtaatgagtaacatcccactgtttgtacaa 22974161  T
Q  343 tgacattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    | |||| |||||||||||  ||||| ||||||||| |||||    
T  22974160 taacatcaaaagttcaattctcatattatcatcaactcatc 22974120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 244 - 383
Target Start/End: Complemental strand, 38528413 - 38528275
Alignment:
Q  244 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaat 343  Q
    |||||||||| ||||||||||| || | ||||  ||||  ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| |    
T  38528413 aaggaaaattctatggtgaagtcatgaaaatggtttttctgatgaagttaacactataacatcaaaattgtaatgagtaacaccccattgtttatacagt 38528314  T
Q  344 gacattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    ||||| ||||||||| || |||||||||||||||||||||    
T  38528313 gacatcaaaagttcagtc-tcatagtatcatcaattcatc 38528275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 235 - 383
Target Start/End: Complemental strand, 31705797 - 31705650
Alignment:
Q  235 aataaaataaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgt 334  Q
    ||||||||||| ||||||| ||||||||||| |||| ||||| ||||| | ||||||||||||||||||||||||| ||||| ||||||||||| |  ||    
T  31705797 aataaaataaaagaaaattctatggtgaagtcataaaaatgatttttttggtgaagttaacactataacatcaaaaatgtaacgagtaacaccctaccgt 31705698  T
Q  335 ttgtacaatgacattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    |||||||||||||| |||||| || || || ||||||||||||||||||    
T  31705697 ttgtacaatgacatcaaaagtccagtcctc-tagtatcatcaattcatc 31705650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 244 - 382
Target Start/End: Complemental strand, 5112490 - 5112352
Alignment:
Q  244 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaat 343  Q
    |||||||||||||||||||||| || | ||||||||||| | ||||||||| |||||||||| |||| | || |||||||||||||| |||||||||| |    
T  5112490 aaggaaaattttatggtgaagtcatgaaaatgacttttttggtgaagttaatactataacataaaaaatatagtgagtaacaccccactgtttgtacagt 5112391  T
Q  344 gacattaaaagttcaatcatcatagtatcatcaattcat 382  Q
    | ||| ||||||||| ||  |||||||||||||||||||    
T  5112390 ggcatcaaaagttcagtccccatagtatcatcaattcat 5112352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 242 - 383
Target Start/End: Complemental strand, 14919708 - 14919566
Alignment:
Q  242 taaaggaaaattttatggtgaagttataagaatgactttttg-gatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtac 340  Q
    |||||||||||| ||||||||||| || ||||| | |||||  ||||||||||||| ||||||||||||| |||||||||||||||| || ||||| ||     
T  14919708 taaaggaaaattatatggtgaagtcatgagaattattttttttgatgaagttaacattataacatcaaaaatgtaatgagtaacacctcactgtttatat 14919609  T
Q  341 aatgacattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    |||||||| ||||||||| || ||||||||||||||| |||||    
T  14919608 aatgacatcaaaagttcagtcctcatagtatcatcaactcatc 14919566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 243 - 383
Target Start/End: Complemental strand, 8742065 - 8741924
Alignment:
Q  243 aaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaaca-ccccaatgtttgtaca 341  Q
    ||||||||||| ||||||||||| || ||||||||||||  | |||||||||||||||| |||||||| |||  ||||||||| ||||| ||||||||||    
T  8742065 aaaggaaaattctatggtgaagtcatgagaatgacttttctggtgaagttaacactatagcatcaaaagtgttgtgagtaacacccccattgtttgtaca 8741966  T
Q  342 atgacattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    ||| ||| ||||||||| ||  ||||||||||||||||||||    
T  8741965 atggcatcaaaagttcagtctccatagtatcatcaattcatc 8741924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 246 - 382
Target Start/End: Original strand, 7693230 - 7693366
Alignment:
Q  246 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 345  Q
    |||||||| ||||||||||| || | ||||||||||  | ||||||||||||||||||||||||| |||  ||||||||| |||| |||||||||| ||     
T  7693230 ggaaaattctatggtgaagtcattaaaatgacttttctggtgaagttaacactataacatcaaaagtgttgtgagtaacatcccactgtttgtacagtgg 7693329  T
Q  346 cattaaaagttcaatcatcatagtatcatcaattcat 382  Q
    ||| |||||||||||| || |||||||||||||||||    
T  7693330 catcaaaagttcaatcctcttagtatcatcaattcat 7693366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 245 - 383
Target Start/End: Original strand, 9200232 - 9200370
Alignment:
Q  245 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatg 344  Q
    ||||||||||||||||||||| || | ||| ||||||  | ||||||||||||||||||||||||| |||  ||||||||||||||  ||||||||| ||    
T  9200232 aggaaaattttatggtgaagtcattaaaataacttttctggtgaagttaacactataacatcaaaagtgttgtgagtaacaccccacagtttgtacagtg 9200331  T
Q  345 acattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    |||| ||||||| | || || ||||||||||||||||||    
T  9200332 acatcaaaagtttagtcctcttagtatcatcaattcatc 9200370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 244 - 382
Target Start/End: Complemental strand, 35826660 - 35826522
Alignment:
Q  244 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaat 343  Q
    |||||||||| ||||||||||| || | |||||||||||   ||||||||| ||||||||||||||| |||| ||||||||||  || |||||||||| |    
T  35826660 aaggaaaattctatggtgaagtcatgataatgactttttttgtgaagttaatactataacatcaaaaatgtactgagtaacacttcattgtttgtacagt 35826561  T
Q  344 gacattaaaagttcaatcatcatagtatcatcaattcat 382  Q
    ||||| ||||||||| || |||||||||||||| |||||    
T  35826560 gacatcaaaagttcagtcctcatagtatcatcagttcat 35826522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 246 - 383
Target Start/End: Original strand, 15724490 - 15724625
Alignment:
Q  246 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 345  Q
    |||||||| |||||||||||||| ||||||||||||| | ||||||||||||||||||||||||| | |  |||||||||||||| ||||| ||||||||    
T  15724490 ggaaaattctatggtgaagttatgagaatgacttttttggtgaagttaacactataacatcaaaagttttgtgagtaacaccccactgtttatacaatga 15724589  T
Q  346 cattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    || | |||||||| ||  |||| |||||||||||||||    
T  15724590 ca-tcaaagttcagtc-ccataatatcatcaattcatc 15724625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 243 - 383
Target Start/End: Original strand, 19119856 - 19119996
Alignment:
Q  243 aaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaa 342  Q
    ||||||||||| ||||||||||| || ||||||||||||  | |||||||||||||||| |||||||| |||    |||||||||||| ||||||||||     
T  19119856 aaaggaaaattctatggtgaagtcatgagaatgacttttgtggtgaagttaacactatagcatcaaaagtgttgctagtaacaccccactgtttgtacag 19119955  T
Q  343 tgacattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    |||||| ||||||||| ||  |||||| |||||||||||||    
T  19119956 tgacatcaaaagttcagtccccatagtgtcatcaattcatc 19119996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 244 - 383
Target Start/End: Original strand, 27330304 - 27330441
Alignment:
Q  244 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaat 343  Q
    |||||||||| |||||||||||  |  |||||||||||  | ||||||||||||||||||||||||| |||  |||||||||||  | ||||||||||||    
T  27330304 aaggaaaattctatggtgaagtcgtgggaatgacttttctggtgaagttaacactataacatcaaaagtgt--tgagtaacaccttactgtttgtacaat 27330401  T
Q  344 gacattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    | ||| ||||||||| || |||||||||||||||||||||    
T  27330402 ggcatcaaaagttcagtcttcatagtatcatcaattcatc 27330441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 237 - 383
Target Start/End: Original strand, 22980784 - 22980930
Alignment:
Q  237 taaaataaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgttt 336  Q
    ||||||||  |||||||||||| ||||||||| ||||||||||||  | ||||||||||||||||  ||||||| |  | ||||||| |||||| |||||    
T  22980784 taaaataatagaaaattttatgatgaagttatgagaatgacttttctggtgaagttaacactatagtatcaaaaatacagtgagtaataccccactgttt 22980883  T
Q  337 gtacaatgacattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    |  ||||||||| ||||||||| ||  ||||||||||||||||||||    
T  22980884 gagcaatgacatcaaaagttcagtccccatagtatcatcaattcatc 22980930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 286 - 383
Target Start/End: Complemental strand, 30969459 - 30969362
Alignment:
Q  286 tgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    ||||||||||||||||||||||||| |||  |||||||||||||| | ||| ||||||||||| ||||||||| || |||||||||||||||||||||    
T  30969459 tgaagttaacactataacatcaaaagtgttgtgagtaacaccccactatttatacaatgacatcaaaagttcagtcctcatagtatcatcaattcatc 30969362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 244 - 383
Target Start/End: Original strand, 22255179 - 22255319
Alignment:
Q  244 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaat-tgtaatgagtaacaccccaatgtttgtacaa 342  Q
    |||||||| | || |||||||| |||| ||| ||||||| | ||||||||||| |||||||||||||  |||||||||||||||||||  ||||||||||    
T  22255179 aaggaaaactctacggtgaagtcataaaaataacttttttggtgaagttaacattataacatcaaaaaatgtaatgagtaacaccccaccgtttgtacaa 22255278  T
Q  343 tgacattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    || ||| ||||||||| |  ||||| |||||||||||||||    
T  22255279 tggcatcaaaagttcagttctcatattatcatcaattcatc 22255319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 245 - 383
Target Start/End: Complemental strand, 1429321 - 1429183
Alignment:
Q  245 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatg 344  Q
    ||||||| | ||||||||||| || | ||||||| ||| | |||||||||||||||| |||||||| | || |||||||||||||| |||||||||| ||    
T  1429321 aggaaaaatctatggtgaagtcatgaaaatgactcttttggtgaagttaacactatagcatcaaaaatatagtgagtaacaccccactgtttgtacactg 1429222  T
Q  345 acattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
     ||| |||| |||| ||  ||||||||||||||||||||    
T  1429221 gcatcaaaaattcagtctccatagtatcatcaattcatc 1429183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 246 - 383
Target Start/End: Complemental strand, 23116397 - 23116260
Alignment:
Q  246 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 345  Q
    |||||||| |||||||| || || | |||||||||||  |||||||||||| ||||||||||||| |||| |||||| ||||||| |||||||||| ||     
T  23116397 ggaaaattctatggtgacgtcatgaaaatgactttttttatgaagttaacattataacatcaaaactgtagtgagtagcaccccactgtttgtacagtgg 23116298  T
Q  346 cattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
     || ||||||||| |   ||||||||||||||||||||    
T  23116297 aatcaaaagttcagtttacatagtatcatcaattcatc 23116260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 246 - 383
Target Start/End: Complemental strand, 31786821 - 31786684
Alignment:
Q  246 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 345  Q
    |||||||| ||| |||||||  | ||||||||||||| | |||||||||||||||| ||| |||| |||| |||| |   ||||| |||||||||| ||     
T  31786821 ggaaaattctatagtgaagtagtgagaatgacttttttggtgaagttaacactatagcatgaaaaatgtagtgagcactgccccactgtttgtacagtgg 31786722  T
Q  346 cattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    ||| |||||||||||| |||||||||||||||||||||    
T  31786721 catcaaaagttcaatcctcatagtatcatcaattcatc 31786684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 246 - 383
Target Start/End: Complemental strand, 35511652 - 35511515
Alignment:
Q  246 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 345  Q
    |||||||  ||||||||||| || | |||||| |||  ||||||||||||| ||||||||||| | |||| |||||||||| ||| |||||||| | |||    
T  35511652 ggaaaatcctatggtgaagtcatgaaaatgacgtttctgatgaagttaacattataacatcaacactgtagtgagtaacactccactgtttgtaaagtga 35511553  T
Q  346 cattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    ||| ||||||||| |||||||| ||||| |||||||||    
T  35511552 catcaaaagttcagtcatcatactatcaccaattcatc 35511515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 244 - 383
Target Start/End: Original strand, 12910348 - 12910492
Alignment:
Q  244 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgttt-----gt 338  Q
    |||||||||| ||||||||||| || | ||||||||||| | ||||||||| ||||||||||||||| | || || ||||||||||| |||||     ||    
T  12910348 aaggaaaattctatggtgaagtcatgaaaatgacttttttggtgaagttaaaactataacatcaaaaatatagtgcgtaacaccccactgtttgtacagt 12910447  T
Q  339 acaatgacattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    ||| |||||| ||||||||| || |||||||||| ||||||||||    
T  12910448 acagtgacatcaaaagttcagtcctcatagtatcgtcaattcatc 12910492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 240 - 383
Target Start/End: Complemental strand, 17158214 - 17158069
Alignment:
Q  240 aataaaggaaaattttatggtgaagttataagaatgactttttggat---gaagttaacactataacatcaaaattgtaatgagtaacaccccaatgttt 336  Q
    |||| ||||||||| ||||||||||| |||| ||||| |||||   |   ||||||||||||||||||| |||| ||||||||||||||| |||  ||||    
T  17158214 aatataggaaaattctatggtgaagtcataaaaatgatttttttttttgtgaagttaacactataacataaaaaatgtaatgagtaacactccaccgttt 17158115  T
Q  337 gtacaatgacattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    |||||||||||| ||||||||  |||| |||||||||| ||||||||    
T  17158114 gtacaatgacatcaaaagttc-gtcattatagtatcattaattcatc 17158069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 247 - 383
Target Start/End: Original strand, 32563150 - 32563286
Alignment:
Q  247 gaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgac 346  Q
    ||||||| ||||||||||| || | ||||| ||||  ||||||||||||||||||||||||||| |||  |||||||||| ||| ||| |||||| ||||    
T  32563150 gaaaattctatggtgaagtcattaaaatgatttttctgatgaagttaacactataacatcaaaagtgttgtgagtaacactccactgtctgtacagtgac 32563249  T
Q  347 attaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    || ||||||||| ||  | || |||||||||||||||    
T  32563250 atcaaaagttcagtccccttaatatcatcaattcatc 32563286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 248 - 383
Target Start/End: Original strand, 5837557 - 5837692
Alignment:
Q  248 aaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgaca 347  Q
    |||||| || |||||| | || ||||||||||||  | ||||| |||||||||| |||||||| |||  |||||||||||||| |||||||||| |||||    
T  5837557 aaaattctacggtgaattcatgagaatgacttttctggtgaaggtaacactatagcatcaaaagtgttgtgagtaacaccccactgtttgtacagtgaca 5837656  T
Q  348 ttaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    | |||| |||| ||  ||||||||||||||||||||    
T  5837657 tcaaaatttcagtctccatagtatcatcaattcatc 5837692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 244 - 383
Target Start/End: Original strand, 36860421 - 36860560
Alignment:
Q  244 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaat 343  Q
    |||||||||| ||||||||||| |  | ||||| ||||  | ||||||||||||||||  || |||| |||  |||||||||||||| ||||||||||||    
T  36860421 aaggaaaattctatggtgaagtcacgaaaatgatttttctggtgaagttaacactatagtataaaaaatgttgtgagtaacaccccactgtttgtacaat 36860520  T
Q  344 gacattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    ||||| ||||||||| ||  |||||||||| |||||||||    
T  36860521 gacatcaaaagttcagtccccatagtatcaacaattcatc 36860560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 254 - 383
Target Start/End: Complemental strand, 43308819 - 43308690
Alignment:
Q  254 ttatggtgaagttataagaatgactttttgga-tgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaa 352  Q
    |||||||||||| || |||||||||||||  | | ||||||||| ||||||||||||| |||||||| |||||||| | |||| |||||||| ||| |||    
T  43308819 ttatggtgaagtcatgagaatgactttttttagtaaagttaacattataacatcaaaaatgtaatgaataacaccc-actgttcgtacaatggcatcaaa 43308721  T
Q  353 agttcaatcatcatagtatcatcaattcatc 383  Q
    |||||| || ||||||||||||||| |||||    
T  43308720 agttcagtcctcatagtatcatcaactcatc 43308690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 258 - 383
Target Start/End: Complemental strand, 27318650 - 27318525
Alignment:
Q  258 ggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagttc 357  Q
    |||||||| || ||||||| ||||  | |||||||||||||| ||||| |||| |||| |||||||||| ||| ||||||||||||||||| |||||||     
T  27318650 ggtgaagtcatgagaatgatttttctggtgaagttaacactaaaacataaaaaatgtagtgagtaacacaccactgtttgtacaatgacatcaaaagttt 27318551  T
Q  358 aatcatcatagtatcatcaattcatc 383  Q
    | |  ||| |||||||||||||||||    
T  27318550 agttctcacagtatcatcaattcatc 27318525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 259 - 383
Target Start/End: Original strand, 26268087 - 26268211
Alignment:
Q  259 gtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagttca 358  Q
    ||||||| || ||||||| ||||  | |||||||||||||||| |||||||| |||  |||||||||||||| |||||||||  |||||| ||||||| |    
T  26268087 gtgaagtcatgagaatgatttttctggtgaagttaacactatagcatcaaaagtgttttgagtaacaccccactgtttgtacggtgacatcaaaagttta 26268186  T
Q  359 atcatcatagtatcatcaattcatc 383  Q
     ||  ||||||||||||||||||||    
T  26268187 gtccacatagtatcatcaattcatc 26268211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 244 - 341
Target Start/End: Complemental strand, 13956522 - 13956425
Alignment:
Q  244 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtaca 341  Q
    |||||||||| || |||||||| || | ||||||||||   |||||||||||||||||||||||||| |||| ||||||||||| || ||||||||||    
T  13956522 aaggaaaattctacggtgaagtcatgaaaatgacttttctcatgaagttaacactataacatcaaaactgtagtgagtaacacctcactgtttgtaca 13956425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 246 - 383
Target Start/End: Complemental strand, 14409501 - 14409365
Alignment:
Q  246 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 345  Q
    |||||||| ||||||||||| || ||||||| ||||  | |||||| |||||||||||||||||| |||| |||||| ||||||| | ||  |||  ||     
T  14409501 ggaaaattctatggtgaagtcatgagaatgatttttctggtgaagtcaacactataacatcaaaaatgtagtgagtagcaccccactcttaatacggtgg 14409402  T
Q  346 cattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    ||| ||||||||| || |||||||||||||||||||||    
T  14409401 catcaaaagttcagtc-tcatagtatcatcaattcatc 14409365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 246 - 383
Target Start/End: Original strand, 22019632 - 22019769
Alignment:
Q  246 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 345  Q
    ||||| || |||||||||||||| ||||||||||||  | ||||||||| ||||||  ||||||| |||  |||||||||||||| |||||||| | |||    
T  22019632 ggaaatttctatggtgaagttattagaatgacttttctggtgaagttaaaactatagaatcaaaagtgttgtgagtaacaccccattgtttgtatagtga 22019731  T
Q  346 cattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    ||| ||||||| | ||  | ||||||||||| ||||||    
T  22019732 catcaaaagttaagtccccttagtatcatcacttcatc 22019769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 246 - 383
Target Start/End: Original strand, 36866762 - 36866899
Alignment:
Q  246 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 345  Q
    |||||||| ||||||||||| |  | ||||| ||||  | ||||||||||||||||| ||||||| | |  |||||||||||||| |||||||||||||     
T  36866762 ggaaaattctatggtgaagtcacgaaaatgatttttctggtgaagttaacactataatatcaaaaatattgtgagtaacaccccactgtttgtacaatgg 36866861  T
Q  346 cattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    ||| ||||||||| ||   ||||||||| |||||||||    
T  36866862 catcaaaagttcagtcccgatagtatcaacaattcatc 36866899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 246 - 379
Target Start/End: Original strand, 5829897 - 5830034
Alignment:
Q  246 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataa----catcaaaattgtaatgagtaacaccccaatgtttgtaca 341  Q
    |||||||| || ||||||||  ||| ||||| ||||| | ||||||||||| |||||    ||| |||| ||||||||||||||||| |  |||||||||    
T  5829897 ggaaaattctagggtgaagtcgtaaaaatgatttttttggtgaagttaacattataattaacataaaaaatgtaatgagtaacaccctaccgtttgtaca 5829996  T
Q  342 atgacattaaaagttcaatcatcatagtatcatcaatt 379  Q
    ||||||| ||||||| | || |||||||||||||||||    
T  5829997 atgacatcaaaagtttagtcctcatagtatcatcaatt 5830034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 239 - 383
Target Start/End: Original strand, 8466738 - 8466881
Alignment:
Q  239 aaataaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgt 338  Q
    |||| |||||||||| |||| ||| || || ||||||||||||  | ||||||||||||| ||||||||||| |||  ||| |||||||||  | |||||    
T  8466738 aaattaaggaaaattctatgatgaggtcatgagaatgacttttctggtgaagttaacactgtaacatcaaaagtgttgtgaataacacccc-ctctttgt 8466836  T
Q  339 acaatgacattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    ||| ||  || ||||||||||||  ||||||||||||||||||||    
T  8466837 acagtggtatcaaaagttcaatccccatagtatcatcaattcatc 8466881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 248 - 383
Target Start/End: Complemental strand, 25501099 - 25500964
Alignment:
Q  248 aaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgaca 347  Q
    |||||| ||||||||||| || ||||||||||||  | | |||||||||||||| |||||||| |||  ||| ||||||| || |||||||||| || ||    
T  25501099 aaaattctatggtgaagtcatgagaatgacttttctggtaaagttaacactatagcatcaaaagtgttgtgaataacacctcactgtttgtacactgcca 25501000  T
Q  348 ttaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    | ||||||| | ||   |||||||||||||||||||    
T  25500999 tcaaaagttaagtccctatagtatcatcaattcatc 25500964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 245 - 383
Target Start/End: Original strand, 39572818 - 39572956
Alignment:
Q  245 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatg 344  Q
    ||||||||| ||||||||||| || ||||||||||||    | ||||||| ||||||| || |||| |||  |||||||||| ||| ||||||| || ||    
T  39572818 aggaaaattctatggtgaagtcatgagaatgacttttctagttaagttaatactataatataaaaaatgttgtgagtaacactccactgtttgtgcagtg 39572917  T
Q  345 acattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    |||| ||||||||| |  |||||||||||| ||||||||    
T  39572918 acatcaaaagttcagttctcatagtatcataaattcatc 39572956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 246 - 383
Target Start/End: Original strand, 40133385 - 40133522
Alignment:
Q  246 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 345  Q
    |||||||| ||||||||||| |  | ||||||||||  | ||||||||||| ||||  ||||||| |||  |||||||||||||| | |||||||||||     
T  40133385 ggaaaattctatggtgaagtcacgaaaatgacttttgtggtgaagttaacattatagtatcaaaaatgttgtgagtaacaccccactatttgtacaatgg 40133484  T
Q  346 cattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    ||| ||||||||| ||  |||| ||||| |||||||||    
T  40133485 catcaaaagttcagtccccataatatcaacaattcatc 40133522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 248 - 383
Target Start/End: Complemental strand, 7209037 - 7208902
Alignment:
Q  248 aaaattttatggtgaagttataagaatgactttttg-gatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgac 346  Q
    |||||| || |||||||| |||| |||||||||||  | ||||||||||| | |||||| |||| || || ||||||||||| |  ||||||||| ||||    
T  7209037 aaaattctacggtgaagtcataaaaatgactttttttggtgaagttaacattgtaacataaaaaatgcaacgagtaacaccctaccgtttgtacattgac 7208938  T
Q  347 attaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    || ||||||||| || || ||||||||||||||||||    
T  7208937 atcaaaagttcagtcctc-tagtatcatcaattcatc 7208902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 246 - 330
Target Start/End: Complemental strand, 26317859 - 26317775
Alignment:
Q  246 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacacccca 330  Q
    |||||||| |||| |||||| || | ||||||||||| | ||||||||||||||||||||||||| | ||| |||||||||||||    
T  26317859 ggaaaattctatgatgaagtcatgaaaatgacttttttggtgaagttaacactataacatcaaaaatataacgagtaacacccca 26317775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 279 - 330
Target Start/End: Original strand, 22255608 - 22255659
Alignment:
Q  279 ttttggatgaagttaacactataacatcaaaattgtaatgagtaacacccca 330  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  22255608 tttttgatgaagttaacactataacatcaaaaatgtaatgagtaacacccca 22255659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 312 - 383
Target Start/End: Original strand, 35504431 - 35504502
Alignment:
Q  312 tgtaatgagtaacaccccaatgtttgtacaatgacattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    |||||||||||||||| ||  |||||||  ||||||| |||||||||||||| |||||||||||||||||||    
T  35504431 tgtaatgagtaacacctcaccgtttgtatgatgacatcaaaagttcaatcattatagtatcatcaattcatc 35504502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 259 - 377
Target Start/End: Original strand, 8436979 - 8437097
Alignment:
Q  259 gtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagttca 358  Q
    ||||||| || ||||||| ||||| | |||| ||||||||||| | || ||| |||| ||||||||| |||| |||||||||| |||||| |||||||||    
T  8436979 gtgaagtcatgagaatgatttttttggtgaaattaacactatagcttccaaagtgtagtgagtaacatcccattgtttgtacagtgacatcaaaagttca 8437078  T
Q  359 atcatcatagtatcatcaa 377  Q
     || ||||  |||||||||    
T  8437079 gtcctcattatatcatcaa 8437097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 258 - 379
Target Start/End: Original strand, 33908245 - 33908366
Alignment:
Q  258 ggtgaagttataagaatga-ctttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagtt 356  Q
    |||||||| || ||||||| |||| ||| |||||| ||||||||| |||||||| |||| |||||| ||| ||| |||||||||  || ||| |||||||    
T  33908245 ggtgaagtcatgagaatgaactttctgg-tgaagtcaacactatatcatcaaaagtgtagtgagtagcactccactgtttgtacggtggcatcaaaagtt 33908343  T
Q  357 caatcatcatagtatcatcaatt 379  Q
    || || |||||||||||||||||    
T  33908344 cagtcctcatagtatcatcaatt 33908366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 245 - 327
Target Start/End: Original strand, 35933901 - 35933983
Alignment:
Q  245 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacacc 327  Q
    ||||||||| ||||||||||| || ||||||| ||||| ||||||||||||||||||  ||||||| |||  |||||||||||    
T  35933901 aggaaaattgtatggtgaagtcatgagaatgatttttttgatgaagttaacactatagaatcaaaagtgttgtgagtaacacc 35933983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 286 - 382
Target Start/End: Original strand, 25668690 - 25668785
Alignment:
Q  286 tgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagttcaatcatcatagtatcatcaattcat 382  Q
    ||||||||||||| ||||||||||| |||  |||||||||||||| |||||| ||| || ||| ||||||||| ||  | |||||||||||||||||    
T  25668690 tgaagttaacact-taacatcaaaagtgttgtgagtaacaccccactgtttgaacagtggcatcaaaagttcagtccccttagtatcatcaattcat 25668785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 248 - 383
Target Start/End: Original strand, 11898004 - 11898139
Alignment:
Q  248 aaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgaca 347  Q
    ||||||||| |||||||| || | ||| ||||||  | | ||||||| | |||| |||||||| || | |||||||||||| | |  ||||||| |||||    
T  11898004 aaaattttagggtgaagtcatgataataacttttctggtaaagttaatattatagcatcaaaagtgcactgagtaacaccctactagttgtacagtgaca 11898103  T
Q  348 ttaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    | ||||||| | || |||||||||||||||||||||    
T  11898104 tcaaaagtttagtcctcatagtatcatcaattcatc 11898139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 325 - 383
Target Start/End: Complemental strand, 15992636 - 15992578
Alignment:
Q  325 accccaatgtttgtacaatgacattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    |||||| |||||||||| |||||| ||||||||| || |||||||||||||||||||||    
T  15992636 accccactgtttgtacagtgacatcaaaagttcagtcttcatagtatcatcaattcatc 15992578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 317 - 383
Target Start/End: Complemental strand, 21088870 - 21088804
Alignment:
Q  317 tgagtaacaccccaatgtttgtacaatgacattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    ||||| |||||||| ||||||||||||||||| ||||||||| ||  |||||||||| |||||||||    
T  21088870 tgagtgacaccccactgtttgtacaatgacatcaaaagttcagtccccatagtatcaacaattcatc 21088804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 383
Target Start/End: Complemental strand, 28416662 - 28416565
Alignment:
Q  286 tgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    ||||||||||||||||| ||||||| | |  ||||||||| |||| |||||||||| ||  || ||||||||||||  | || |||||||||||||||    
T  28416662 tgaagttaacactataatatcaaaagtattgtgagtaacatcccactgtttgtacagtggaatcaaaagttcaatctccttaatatcatcaattcatc 28416565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 303 - 379
Target Start/End: Complemental strand, 6824599 - 6824521
Alignment:
Q  303 catcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagt--tcaatcatcatagtatcatcaatt 379  Q
    |||||||| |||  |||||||||| ||| |||||||||| |||||| ||||||  ||| || |||||||||||||||||    
T  6824599 catcaaaagtgttgtgagtaacactccactgtttgtacagtgacatcaaaagtgttcagtcttcatagtatcatcaatt 6824521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 247 - 294
Target Start/End: Original strand, 21320752 - 21320799
Alignment:
Q  247 gaaaattttatggtgaagttataagaatgactttttggatgaagttaa 294  Q
    ||||||| ||||||||||| |||| ||||||||||| |||||||||||    
T  21320752 gaaaattctatggtgaagtaataaaaatgacttttttgatgaagttaa 21320799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 323
Target Start/End: Complemental strand, 16004552 - 16004474
Alignment:
Q  246 ggaaaattttatggtgaagttataagaat-gactttttggatgaagttaacactataacatcaaaattgtaatgagtaa 323  Q
    |||||||| |||||| |||| || ||||| |||||||  | ||||||||||||||||||||||||| |||  |||||||    
T  16004552 ggaaaattctatggtaaagtcatgagaattgacttttctggtgaagttaacactataacatcaaaaatgttgtgagtaa 16004474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 330
Target Start/End: Original strand, 5748478 - 5748519
Alignment:
Q  289 agttaacactataacatcaaaattgtaatgagtaacacccca 330  Q
    ||||||||||||||| |||||| | |||||||||||||||||    
T  5748478 agttaacactataacgtcaaaaatataatgagtaacacccca 5748519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 282
Target Start/End: Complemental strand, 12081334 - 12081285
Alignment:
Q  233 acaataaaataaaggaaaattttatggtgaagttataagaatgacttttt 282  Q
    ||||| || ||||| |||||| |||||||||||||| |||||||||||||    
T  12081334 acaattaattaaagaaaaattatatggtgaagttatgagaatgacttttt 12081285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 353
Target Start/End: Original strand, 42342775 - 42342840
Alignment:
Q  288 aagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaa 353  Q
    ||||||| ||||||||||||||| |||  ||||||| |||||| ||||| |||| |||||| ||||    
T  42342775 aagttaatactataacatcaaaaatgttgtgagtaataccccactgtttatacagtgacatcaaaa 42342840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 76; Significance: 5e-35; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 248 - 383
Target Start/End: Original strand, 43959 - 44094
Alignment:
Q  248 aaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgaca 347  Q
    |||||| |||||||||||  |||||| |||||||| | |||||||||| |||||| ||||||| ||||||||||||||||||  ||||||||||||| ||    
T  43959 aaaattctatggtgaagtcgtaagaaagacttttttggtgaagttaacgctataatatcaaaaatgtaatgagtaacaccccgttgtttgtacaatggca 44058  T
Q  348 ttaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    | ||||||||| || |||||||||||||||||||||    
T  44059 taaaaagttcagtcctcatagtatcatcaattcatc 44094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 76; Significance: 5e-35; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 248 - 383
Target Start/End: Complemental strand, 154828 - 154693
Alignment:
Q  248 aaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgaca 347  Q
    |||||| |||||||||||  |||||| |||||||| | |||||||||| |||||| ||||||| ||||||||||||||||||  ||||||||||||| ||    
T  154828 aaaattctatggtgaagtcgtaagaaagacttttttggtgaagttaacgctataatatcaaaaatgtaatgagtaacaccccgttgtttgtacaatggca 154729  T
Q  348 ttaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    | ||||||||| || |||||||||||||||||||||    
T  154728 taaaaagttcagtcctcatagtatcatcaattcatc 154693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 248 - 383
Target Start/End: Complemental strand, 146199 - 146064
Alignment:
Q  248 aaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgaca 347  Q
    |||||| || |||||||| |||||||||| ||||| | | ||||||||| |||||||| |||| ||||||||||||||||||| | |||||| |||||||    
T  146199 aaaattctacggtgaagtcataagaatgatttttttggttaagttaacattataacataaaaaatgtaatgagtaacaccccattatttgtagaatgaca 146100  T
Q  348 ttaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    | |||||||||  | |||||||||||||||||||||    
T  146099 tcaaaagttcagccttcatagtatcatcaattcatc 146064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 55; Significance: 2e-22; HSPs: 4)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 245 - 383
Target Start/End: Original strand, 133 - 271
Alignment:
Q  245 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatg 344  Q
    ||||||||| ||||||||||| |  | ||||||||||  | ||||||||||||| ||  || |||| |||  |||||||||| ||| |||||||||||||    
T  133 aggaaaattctatggtgaagtcacgaaaatgacttttctggtgaagttaacactgtagtataaaaaatgttgtgagtaacactccactgtttgtacaatg 232  T
Q  345 acattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
     ||| ||||||||| || |||||||||||||||||||||    
T  233 gcatcaaaagttcagtcctcatagtatcatcaattcatc 271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 272 - 382
Target Start/End: Complemental strand, 94542 - 94432
Alignment:
Q  272 aatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagttcaatcatcatagtat 371  Q
    ||||||||||  ||||||||||||| |||||||||||||||||| |||||||||||||| |||||||||| || ||| |||||||   ||  |||| |||    
T  94542 aatgacttttctgatgaagttaacattataacatcaaaattgtagtgagtaacaccccactgtttgtacagtggcatcaaaagtttggtccccatactat 94443  T
Q  372 catcaattcat 382  Q
    |||||||||||    
T  94442 catcaattcat 94432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 300 - 383
Target Start/End: Complemental strand, 408559 - 408477
Alignment:
Q  300 taacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
    ||||||||||| ||||||||||||||||  |  ||||||| ||||| || ||||||||| || || ||||||||||||||||||    
T  408559 taacatcaaaaatgtaatgagtaacaccttaccgtttgtaaaatgaaatcaaaagttcagtcctc-tagtatcatcaattcatc 408477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 298
Target Start/End: Complemental strand, 408756 - 408702
Alignment:
Q  244 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacact 298  Q
    |||||||||| ||||||||||| |||| ||||| ||||| | |||||||||||||    
T  408756 aaggaaaattctatggtgaagtcataaaaatgatttttttggtgaagttaacact 408702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 46; Significance: 4e-17; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 245 - 330
Target Start/End: Original strand, 42347 - 42432
Alignment:
Q  245 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacacccca 330  Q
    ||||||||||||||||||||| || ||||| | ||||  | ||||||||||||||||||||||||| |||  ||||||||||||||    
T  42347 aggaaaattttatggtgaagtcatgagaataatttttctggtgaagttaacactataacatcaaaagtgttgtgagtaacacccca 42432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 243 - 310
Target Start/End: Original strand, 100818 - 100885
Alignment:
Q  243 aaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaa 310  Q
    ||||||||||| ||||||||||| || ||||||| ||||| | |||||||||| ||||||||||||||    
T  100818 aaaggaaaattctatggtgaagtcatgagaatgatttttttggtgaagttaacgctataacatcaaaa 100885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0318 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 248 - 383
Target Start/End: Original strand, 11908 - 12046
Alignment:
Q  248 aaaattttatggtgaagttataagaa-tgactttttggatgaagttaacactataacatcaaaattgtaatgagtaaca-ccccaatgtttgta-caatg 344  Q
    |||||| ||||||||||| || |||| ||||||||  | |||| ||||||| ||||||| |||| |||  ||||||||| ||||| |||||||| || ||    
T  11908 aaaattctatggtgaagtcatgagaaatgacttttctggtgaaattaacaccataacattaaaagtgttgtgagtaacacccccattgtttgtatcagtg 12007  T
Q  345 acattaaaagttcaatcatcatagtatcatcaattcatc 383  Q
      || ||||||||| || ||||| |||||||||||||||    
T  12008 gtatcaaaagttcagtcctcataatatcatcaattcatc 12046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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