View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5165-Insertion-2 (Length: 823)

Name: NF5165-Insertion-2
Description: NF5165
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5165-Insertion-2
NF5165-Insertion-2
[»] chr5 (8 HSPs)
chr5 (7-646)||(26352874-26353519)
chr5 (647-738)||(32325811-32325901)
chr5 (647-738)||(7992408-7992498)
chr5 (647-738)||(12904980-12905070)
chr5 (565-643)||(9816563-9816641)
chr5 (25-134)||(9816996-9817106)
chr5 (647-698)||(34641930-34641981)
chr5 (424-458)||(38434774-38434808)
[»] chr3 (20 HSPs)
chr3 (7-392)||(26648844-26649235)
chr3 (21-263)||(20014211-20014451)
chr3 (422-646)||(26648626-26648848)
chr3 (642-738)||(53208685-53208780)
chr3 (475-638)||(20047330-20047496)
chr3 (651-738)||(32130160-32130246)
chr3 (647-738)||(7322855-7322945)
chr3 (471-646)||(20014618-20014793)
chr3 (647-710)||(9454604-9454667)
chr3 (23-102)||(19836062-19836141)
chr3 (25-106)||(20032281-20032362)
chr3 (25-106)||(20034450-20034531)
chr3 (587-630)||(26654636-26654680)
chr3 (25-100)||(19958393-19958468)
chr3 (38-106)||(19877609-19877677)
chr3 (328-364)||(19983418-19983454)
chr3 (319-378)||(19860352-19860411)
chr3 (25-67)||(20004305-20004347)
chr3 (472-538)||(20006701-20006767)
chr3 (383-417)||(20014497-20014531)
[»] chr1 (3 HSPs)
chr1 (21-240)||(1719012-1719230)
chr1 (423-618)||(1718684-1718879)
chr1 (298-358)||(1718951-1719011)
[»] chr7 (5 HSPs)
chr7 (647-739)||(36167730-36167821)
chr7 (647-737)||(19886572-19886661)
chr7 (647-737)||(32775171-32775260)
chr7 (646-738)||(12859245-12859336)
chr7 (645-690)||(11600122-11600167)
[»] chr8 (6 HSPs)
chr8 (649-738)||(1548139-1548227)
chr8 (648-738)||(34784519-34784608)
chr8 (646-738)||(23033395-23033486)
chr8 (651-738)||(3117707-3117793)
chr8 (646-733)||(3277517-3277603)
chr8 (647-738)||(20900774-20900864)
[»] chr2 (6 HSPs)
chr2 (649-738)||(44673172-44673260)
chr2 (647-738)||(25438287-25438377)
chr2 (647-698)||(6536545-6536596)
chr2 (651-701)||(37154922-37154972)
chr2 (646-698)||(21006375-21006427)
chr2 (297-352)||(3029570-3029625)
[»] chr6 (1 HSPs)
chr6 (645-738)||(13425676-13425768)
[»] chr4 (5 HSPs)
chr4 (647-738)||(16497910-16498000)
chr4 (649-738)||(2588491-2588579)
chr4 (649-739)||(5650758-5650847)
chr4 (647-709)||(52249513-52249575)
chr4 (647-698)||(28075449-28075500)


Alignment Details
Target: chr5 (Bit Score: 557; Significance: 0; HSPs: 8)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 557; E-Value: 0
Query Start/End: Original strand, 7 - 646
Target Start/End: Original strand, 26352874 - 26353519
Alignment:
Q  7 attatgctcttcgaataacaaaatcaatatcttcattgacttcaatattgccatgatctacctaaaagactcaagttcggtcccttcacatttactcacc 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  26352874 attatgctcttcgaataacaaaatcaatatcttcattgacttcaatattgccatgatctac-taaaagactcaagttcggtcccttcacatttactcacc 26352972  T
Q  107 actactaattactaccgatgaaagctattatggagcacagtttttacaagaaaaaaggcatattatacggagcattcagaaaatcgtgagaaaaatgaaa 206  Q
     |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26352973 gctactaattactaccgatgaaagctattatggagcacagtttgtacaagaaaaaaggcatattatacggagcattcagaaaatcgtgagaaaaatgaaa 26353072  T
Q  207 gatgatgcagaaagaaattgacagcagaggatcttgatccattctgatttttgtccaacag-----agatttgaaaatctgtgttttga--atacaagag 299  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||     |||||||||||||||||||||||   ||||||||    
T  26353073 gatgatgcagaaagaaattgacagcagaggatctagatccattctgatttttgtccaacagatttaagatttgaaaatctgtgttttgactgtacaagag 26353172  T
Q  300 aaattaaagctacgttaagttactcatgatgaaattaggaaagagttatgcttcacttcagataggaagctcgagtgttaataatatatacatgagtttg 399  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||    
T  26353173 aaattaaagttacattaagttactcatgatgaaattaggaaagagttatgcttcacttcagataggaagctcaagtgttaataatata-acatgagtttg 26353271  T
Q  400 gctttagattcacttcatgatttacatagcaaaatatgtgttactcatgccaatactacctatatacaaccaataacacaagcatatcagttaataaaaa 499  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26353272 gcattagattcacttcatgatttacatagcaaaatatgtgttactcatgccaatactacctatatacaaccaataacacaagcatatcagttaataaaaa 26353371  T
Q  500 tatatagattaactcattaaaactagtattacttattccttcaattgttttcaacacaat-aagagtatgaaaagagcatcactgtcgtgagtttcatga 598  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  26353372 tatatagattaactcattaaaactagtattacttattccttcaattgttttcaacacaatcaagagtatgaaaagagcatcactgtcgtgagtttcatga 26353471  T
Q  599 agagaattcaaaaacaaaataaagttttaagaagaagatgatggtggt 646  Q
    || |||||||||||||||||||||||||||||||||||||||||||||    
T  26353472 agggaattcaaaaacaaaataaagttttaagaagaagatgatggtggt 26353519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 647 - 738
Target Start/End: Complemental strand, 32325901 - 32325811
Alignment:
Q  647 caaggtagtcaggaacgagtcccggcatgtaggatcgcacgatcgtacgtgccacagcacctcgggccgtgcttcgatcctacttacgaacc 738  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  32325901 caaggtagtcaggaacgagtcccagcacgtaggatcgcacgatcgtacgtgccacagcacctc-gaccgtgcttcgatcctacttacgaacc 32325811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 647 - 738
Target Start/End: Complemental strand, 7992498 - 7992408
Alignment:
Q  647 caaggtagtcaggaacgagtcccggcatgtaggatcgcacgatcgtacgtgccacagcacctcgggccgtgcttcgatcctacttacgaacc 738  Q
    ||||||||||||||||||||||| ||| |||||||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||||    
T  7992498 caaggtagtcaggaacgagtcccagcacgtaggatcgcacgatcttacgtgccacagcacctc-gaccgtgcttcgatcctacttacgaacc 7992408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 647 - 738
Target Start/End: Complemental strand, 12905070 - 12904980
Alignment:
Q  647 caaggtagtcaggaacgagtcccggcatgtaggatcgcacgatcgtacgtgccacagcacctcgggccgtgcttcgatcctacttacgaacc 738  Q
    |||||||||||||||||||| || ||| |||||||||||||||| ||||||||||| ||| || | || |||||||||||||||||||||||    
T  12905070 caaggtagtcaggaacgagttccagcacgtaggatcgcacgatcttacgtgccacaacacatc-gaccatgcttcgatcctacttacgaacc 12904980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 565 - 643
Target Start/End: Complemental strand, 9816641 - 9816563
Alignment:
Q  565 tatgaaaagagcatcactgtcgtgagtttcatgaagagaattcaaaaacaaaataaagttttaagaagaagatgatggt 643  Q
    |||||||| |||||||||||| ||||||||| |||||||||| |||| |||||||||| |||||||||| |||| ||||    
T  9816641 tatgaaaatagcatcactgtcatgagtttcaggaagagaattaaaaagcaaaataaaggtttaagaagacgatggtggt 9816563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 134
Target Start/End: Complemental strand, 9817106 - 9816996
Alignment:
Q  25 caaaatcaatatcttcattgacttcaatattgccatgatctacctaaaagactcaagttcggtcccttcacattta-ctcaccactactaattactaccg 123  Q
    |||||||||||| |||| ||||||||||||||||||||||||| ||| ||  |||| ||| ||||||| | |||||  | || ||||||||| || |||     
T  9817106 caaaatcaatattttcactgacttcaatattgccatgatctacataatagcttcaacttcagtccctttatatttatttaactactactaatgacaacca 9817007  T
Q  124 atgaaagctat 134  Q
    |||||||||||    
T  9817006 atgaaagctat 9816996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 647 - 698
Target Start/End: Complemental strand, 34641981 - 34641930
Alignment:
Q  647 caaggtagtcaggaacgagtcccggcatgtaggatcgcacgatcgtacgtgc 698  Q
    |||||||| ||||| |||||||| |||||||||||||||||||| |||||||    
T  34641981 caaggtagccaggatcgagtcccagcatgtaggatcgcacgatcttacgtgc 34641930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 424 - 458
Target Start/End: Original strand, 38434774 - 38434808
Alignment:
Q  424 catagcaaaatatgtgttactcatgccaatactac 458  Q
    ||||||||||||||||||| |||||||||||||||    
T  38434774 catagcaaaatatgtgttagtcatgccaatactac 38434808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 139; Significance: 3e-72; HSPs: 20)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 139; E-Value: 3e-72
Query Start/End: Original strand, 7 - 392
Target Start/End: Complemental strand, 26649235 - 26648844
Alignment:
Q  7 attatgctcttcgaataacaaaatcaatatcttcattgacttcaatattgccatgatctacctaaaagactcaagttcggtcccttcacatttactcacc 106  Q
    ||||||||||||  ||||||||||| ||||| |||||| |||||||||||||||||||| | ||| |||||| ||||| |||||||||| |||| || ||    
T  26649235 attatgctcttcatataacaaaatcgatatcgtcattggcttcaatattgccatgatctgcataacagactctagttcagtcccttcacgtttagtcgcc 26649136  T
Q  107 actactaattactaccgatgaaagctattatggagcacagtttttacaagaaaaaaggca-tattatacggagcattcagaaaatcgtgagaaaaatgaa 205  Q
    |||| |||||| || | ||||||||||||||| | ||||| || |||||||| |||| || ||||||| | | ||  ||| ||||| |||||||||||||    
T  26649135 actaataattattatcaatgaaagctattatgtatcacaggttatacaagaataaagacactattatatgaaaca-gcag-aaatcatgagaaaaatgaa 26649038  T
Q  206 agatgatgcagaaagaaattgacagcagaggatcttgatccattctgatttttgtccaacag-----agatttgaaaatctgtgttttg--aatacaaga 298  Q
    |||||||||||||| ||||  |||||||||||||| |||||||||| ||||||||| | |||     |||||||  ||| |||||||||    || ||||    
T  26649037 agatgatgcagaaacaaatctacagcagaggatctagatccattctaatttttgtcaagcagatttaagatttgcgaatttgtgttttggctgtaaaaga 26648938  T
Q  299 gaaattaaagctacgttaagttactcatgatgaaattaggaaagagttatgcttcacttcagataggaagctcgagtgttaataatatatacat 392  Q
    ||||| |||||||| |||| ||||||||||  |||||| | |||||||||||||||||||||||||||||||| |||||| |||||||||||||    
T  26648937 gaaataaaagctacattaaattactcatgaaaaaattaaggaagagttatgcttcacttcagataggaagctcaagtgttgataatatatacat 26648844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 21 - 263
Target Start/End: Original strand, 20014211 - 20014451
Alignment:
Q  21 ataacaaaatcaatatcttcattgacttcaatattgccatgatctacctaaaagactcaagttcggtcccttcacatttactcaccactactaattacta 120  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| | ||| ||| |||       ||||||||||| || |||||||||||| ||||||    
T  20014211 ataacaaaatcaatatcttcattgacttcaatatttccatgatcttcataacagattcat------tcccttcacatgtaatcaccactactagttacta 20014304  T
Q  121 ccgatgaaagctattatggagcacagtttttacaagaaaa----aaggca-tattatacggagcattcagaaaatcgtgagaaaaatgaaagatgatgca 215  Q
    || ||||| |||||| || ||||||| || ||||||||||    |||||| ||||||||| | ||  ||||||||| |||||||||| ||||| | ||||    
T  20014305 ccaatgaaggctattttgtagcacaggttgtacaagaaaagaaaaaggcactattatacgaaacag-cagaaaatcatgagaaaaataaaagacggtgca 20014403  T
Q  216 gaaagaaattgacagcagaggatcttgatccattctgatttttgtcca 263  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||    
T  20014404 gaaagaaattgacagcagaggatcaagatccattctgatttttgtcca 20014451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 422 - 646
Target Start/End: Complemental strand, 26648848 - 26648626
Alignment:
Q  422 tacatagcaaaatatgtgttactcatgccaatactacctatatacaaccaataacacaagcatatcagttaataaaaatatatagattaactcattaaaa 521  Q
    |||||||||||||  ||| || |||||||||| |||| |||| | ||  ||||||||| ||||||||||| |||||||||||||   |||||||||||||    
T  26648848 tacatagcaaaat--gtgctagtcatgccaatgctacttatagataaataataacacaggcatatcagttgataaaaatatatatcataactcattaaaa 26648751  T
Q  522 ctagtattacttattccttcaattgttttcaacacaataagagtatgaaaagagcatcactgtcgtgagtttcatgaagagaattcaaaaacaaaataaa 621  Q
    ||| || |||||  ||||||  ||||| |||||| |   | |||||||||||||||  |||||| ||||||||| || ||||||||||||||||| ||||    
T  26648750 ctaatactactttctccttcctttgttatcaacaaatggacagtatgaaaagagcactactgtcatgagtttcaggaggagaattcaaaaacaaattaaa 26648651  T
Q  622 gttttaagaagaagatgatggtggt 646  Q
    |||||||||| ||||||||||||||    
T  26648650 gttttaagaaaaagatgatggtggt 26648626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 642 - 738
Target Start/End: Complemental strand, 53208780 - 53208685
Alignment:
Q  642 gtggtcaaggtagtcaggaacgagtcccggcatgtaggatcgcacgatcgtacgtgccacagcacctcgggccgtgcttcgatcctacttacgaacc 738  Q
    |||| ||||||||||||||||||||||| ||| |||||||||||||||| |||||||||||||||||| | ||||| ||||||||||||||| ||||    
T  53208780 gtgggcaaggtagtcaggaacgagtcccagcacgtaggatcgcacgatcttacgtgccacagcacctc-gaccgtgtttcgatcctacttacaaacc 53208685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 475 - 638
Target Start/End: Complemental strand, 20047496 - 20047330
Alignment:
Q  475 acacaagcatatcagttaataaaaatatatagattaactcattaaaactagtattac--ttattccttcaattgttttcaacacaata-agagtatgaaa 571  Q
    |||||| |||||||||||||||||||||||||  |||||||| ||||||| | |||   ||  ||||||| ||||| |||||| |||| |||||||||||    
T  20047496 acacaatcatatcagttaataaaaatatatagcataactcatcaaaactaatcttaaaatttatccttcatttgttatcaacaaaatagagagtatgaaa 20047397  T
Q  572 agagcatcactgtcgtgagtttcatgaagagaattcaaaaacaaaataaagttttaagaagaagatg 638  Q
    |||| ||||||||| | ||||| ||||| | ||||||||||||| ||||  |||||||| |||||||    
T  20047396 agagaatcactgtcataagtttgatgaacaaaattcaaaaacaagataactttttaagatgaagatg 20047330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 651 - 738
Target Start/End: Original strand, 32130160 - 32130246
Alignment:
Q  651 gtagtcaggaacgagtcccggcatgtaggatcgcacgatcgtacgtgccacagcacctcgggccgtgcttcgatcctacttacgaacc 738  Q
    ||||||||||||||||| | ||| |||||||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||||    
T  32130160 gtagtcaggaacgagtcgcagcacgtaggatcgcacgatcttacgtgccacagcacctc-gaccgtgcttcgatcctacttacgaacc 32130246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 647 - 738
Target Start/End: Original strand, 7322855 - 7322945
Alignment:
Q  647 caaggtagtcaggaacgagtcccggcatgtaggatcgcacgatcgtacgtgccacagcacctcgggccgtgcttcgatcctacttacgaacc 738  Q
    |||||||| |||||||||||||| ||| |||||||||||||||| |||||||||||||||||| | |||||||||  | |||||||||||||    
T  7322855 caaggtagccaggaacgagtcccagcacgtaggatcgcacgatcttacgtgccacagcacctc-gaccgtgcttcagttctacttacgaacc 7322945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 471 - 646
Target Start/End: Original strand, 20014618 - 20014793
Alignment:
Q  471 aataacacaagcatatcagttaataaaaatatatagattaactcattaaaactagtattacttattccttcaattgttttcaacacaat-aagagtatga 569  Q
    |||||| ||| |||||||||||||||||| |||||   |||||||| ||| ||||||||||||   |||||| || || |||||| |||  |||||||||    
T  20014618 aataacccaatcatatcagttaataaaaacatatatcataactcatcaaagctagtattacttccgccttcatttcttatcaacaaaatggagagtatga 20014717  T
Q  570 aaagagcatcactgtcgtgagtttcatgaagagaattcaaaaacaaaataaagttttaagaagaagatgatggtggt 646  Q
    ||| ||  |||| ||   |||||||| ||| ||||||||||||||| | ||| |||||||||||||||| |||||||    
T  20014718 aaaaagtgtcaccgtaacgagtttcaggaacagaattcaaaaacaaca-aaaattttaagaagaagatggtggtggt 20014793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 647 - 710
Target Start/End: Original strand, 9454604 - 9454667
Alignment:
Q  647 caaggtagtcaggaacgagtcccggcatgtaggatcgcacgatcgtacgtgccacagcacctcg 710  Q
    ||||||||||| |||||| |||| |||||||||||||||||||| |||||||||||||||||||    
T  9454604 caaggtagtcaagaacgattcccagcatgtaggatcgcacgatcttacgtgccacagcacctcg 9454667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 23 - 102
Target Start/End: Complemental strand, 19836141 - 19836062
Alignment:
Q  23 aacaaaatcaatatcttcattgacttcaatattgccatgatctacctaaaagactcaagttcggtcccttcacatttact 102  Q
    ||||||||||| | ||||| |||||||||||||| |||||||| | ||| || ||||| ||| |||||||||||||||||    
T  19836141 aacaaaatcaacaacttcactgacttcaatattgtcatgatcttcataataggctcaacttcagtcccttcacatttact 19836062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 25 - 106
Target Start/End: Original strand, 20032281 - 20032362
Alignment:
Q  25 caaaatcaatatcttcattgacttcaatattgccatgatctacctaaaagactcaagttcggtcccttcacatttactcacc 106  Q
    ||||||||  ||||||||||||||||||||||||||||| | | ||| || ||||| |||  |||||||||||||| |||||    
T  20032281 caaaatcagcatcttcattgacttcaatattgccatgatttgcataatagtctcaacttcaatcccttcacatttattcacc 20032362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 25 - 106
Target Start/End: Original strand, 20034450 - 20034531
Alignment:
Q  25 caaaatcaatatcttcattgacttcaatattgccatgatctacctaaaagactcaagttcggtcccttcacatttactcacc 106  Q
    ||||||||  ||||||||||||||||||||||||||||| | | ||| || ||||| |||  |||||||||||||| |||||    
T  20034450 caaaatcagcatcttcattgacttcaatattgccatgatttgcataatagtctcaacttcaatcccttcacatttattcacc 20034531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 587 - 630
Target Start/End: Complemental strand, 26654680 - 26654636
Alignment:
Q  587 tgagtttcatgaagagaattcaaaaacaaa-ataaagttttaaga 630  Q
    |||||||||||||||||||||||||||||| ||||||||||||||    
T  26654680 tgagtttcatgaagagaattcaaaaacaaatataaagttttaaga 26654636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 100
Target Start/End: Complemental strand, 19958468 - 19958393
Alignment:
Q  25 caaaatcaatatcttcattgacttcaatattgccatgatctacctaaaagactcaagttcggtcccttcacattta 100  Q
    |||||||| |||||||||||||||||||||||||||||| | | | | || ||||| |||  ||||||||||||||    
T  19958468 caaaatcagtatcttcattgacttcaatattgccatgatttgcatcatagcctcaaattcaatcccttcacattta 19958393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 106
Target Start/End: Original strand, 19877609 - 19877677
Alignment:
Q  38 ttcattgacttcaatattgccatgatctacctaaaagactcaagttcggtcccttcacatttactcacc 106  Q
    ||||||||||| |||||||||||||| ||| ||| ||  | ||  ||||||||||||||||||||||||    
T  19877609 ttcattgacttgaatattgccatgatatacataatagcgttaaactcggtcccttcacatttactcacc 19877677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 328 - 364
Target Start/End: Complemental strand, 19983454 - 19983418
Alignment:
Q  328 atgaaattaggaaagagttatgcttcacttcagatag 364  Q
    ||||||||||||||||| |||||||||||||||||||    
T  19983454 atgaaattaggaaagagctatgcttcacttcagatag 19983418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 319 - 378
Target Start/End: Complemental strand, 19860411 - 19860352
Alignment:
Q  319 ttactcatgatgaaattaggaaagagttatgcttcacttcagataggaagctcgagtgtt 378  Q
    ||||||||| | |||||| ||||||||||||||||||||||| ||| | |||| ||||||    
T  19860411 ttactcatgctaaaattatgaaagagttatgcttcacttcagctagaaggctctagtgtt 19860352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 25 - 67
Target Start/End: Original strand, 20004305 - 20004347
Alignment:
Q  25 caaaatcaatatcttcattgacttcaatattgccatgatctac 67  Q
    ||||||||||||   ||||||||||||||||||||||||||||    
T  20004305 caaaatcaatataaccattgacttcaatattgccatgatctac 20004347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 472 - 538
Target Start/End: Original strand, 20006701 - 20006767
Alignment:
Q  472 ataacacaagcatatcagttaataaaaatatatagattaactcattaaaactagtattacttattcc 538  Q
    |||||||||||||| ||| ||||||||| |||||   ||||| ||  ||||||||||||||||||||    
T  20006701 ataacacaagcatagcagataataaaaacatatatcataacttatctaaactagtattacttattcc 20006767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 383 - 417
Target Start/End: Original strand, 20014497 - 20014531
Alignment:
Q  383 atatatacatgagtttggctttagattcacttcat 417  Q
    |||||||||||||||||| ||||||||||||||||    
T  20014497 atatatacatgagtttggatttagattcacttcat 20014531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 89; Significance: 2e-42; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 21 - 240
Target Start/End: Complemental strand, 1719230 - 1719012
Alignment:
Q  21 ataacaaaatcaatatcttcattgacttcaatattgccatgatctacctaaaagactcaagttcggtcccttcacatttactcacc-actactaattact 119  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| | ||| || ||| ||||| ||||||||||||||| ||||| ||||||| |||||    
T  1719230 ataacaaaatcaatatcttcaatgacttcaatattgccatgatctgcataacagcctctagttcagtcccttcacatttagtcacctactactatttact 1719131  T
Q  120 accgatgaaagctattatggagcacagtttttacaagaaaaaaggcatattatacggagcattcagaaaatcgtgagaaaaatgaaagatgatgcagaaa 219  Q
    ||| ||||||||| ||||| ||||||  || ||||||||||||||||| | |||   | ||  ||||||||| |  |||||||  |||||||| ||||||    
T  1719130 accaatgaaagctgttatgtagcacatgttgtacaagaaaaaaggcat-tgatatataaca-gcagaaaatcatatgaaaaatacaagatgatacagaaa 1719033  T
Q  220 gaaattgacagcagaggatct 240  Q
    |||||||||||||||||||||    
T  1719032 gaaattgacagcagaggatct 1719012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 423 - 618
Target Start/End: Complemental strand, 1718879 - 1718684
Alignment:
Q  423 acatagcaaaatatgtgttactcatgccaatactacctatatacaaccaataacacaagcatatcagttaataaaaatatatagat--taactcattaaa 520  Q
    ||||||||||||  || ||| |||||| ||| |||| |||| | ||  |||||||||||||||||||||||||||||| |||| ||  ||||||||||||    
T  1718879 acatagcaaaat--gtcttagtcatgcaaatcctacttatagataaataataacacaagcatatcagttaataaaaatttatacatcataactcattaaa 1718782  T
Q  521 actagtattacttattccttcaattgttttcaacacaat-aagagtatgaaaagagcatcactgtcgtgagtttcatgaagagaattcaaaaacaaaat 618  Q
    |||| ||||||||  ||||||| ||||| |||||| ||| |||||||| |||||||||||| |||| |||||||||| |||| || |||||||||||||    
T  1718781 actaatattactttctccttcatttgttatcaacaaaatgaagagtat-aaaagagcatcaatgtcatgagtttcataaagaaaagtcaaaaacaaaat 1718684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 298 - 358
Target Start/End: Complemental strand, 1719011 - 1718951
Alignment:
Q  298 agaaattaaagctacgttaagttactcatgatgaaattaggaaagagttatgcttcacttc 358  Q
    |||||| | ||||| ||||| ||||||||||||||||||||||||||||||||||||||||    
T  1719011 agaaataagagctatgttaacttactcatgatgaaattaggaaagagttatgcttcacttc 1718951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 69; Significance: 2e-30; HSPs: 5)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 647 - 739
Target Start/End: Complemental strand, 36167821 - 36167730
Alignment:
Q  647 caaggtagtcaggaacgagtcccggcatgtaggatcgcacgatcgtacgtgccacagcacctcgggccgtgcttcgatcctacttacgaacca 739  Q
    ||||||||||||||||||||||| ||| |||||||||||||||| |||||||||||||||||| | |||||||||||||||||||||||||||    
T  36167821 caaggtagtcaggaacgagtcccagcacgtaggatcgcacgatcttacgtgccacagcacctc-gaccgtgcttcgatcctacttacgaacca 36167730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 647 - 737
Target Start/End: Original strand, 19886572 - 19886661
Alignment:
Q  647 caaggtagtcaggaacgagtcccggcatgtaggatcgcacgatcgtacgtgccacagcacctcgggccgtgcttcgatcctacttacgaac 737  Q
    ||||||||||||||||||||||| ||| |||||||| ||||||| |||||||||||||||||| | |||||||||||||||||||||||||    
T  19886572 caaggtagtcaggaacgagtcccagcacgtaggatcacacgatcttacgtgccacagcacctc-gaccgtgcttcgatcctacttacgaac 19886661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 647 - 737
Target Start/End: Original strand, 32775171 - 32775260
Alignment:
Q  647 caaggtagtcaggaacgagtcccggcatgtaggatcgcacgatcgtacgtgccacagcacctcgggccgtgcttcgatcctacttacgaac 737  Q
    ||||||||||||||||||||||| |||||||||||| ||||| | |||||||||||||||||| | |||||||||||||||||||||||||    
T  32775171 caaggtagtcaggaacgagtcccagcatgtaggatcacacgaccttacgtgccacagcacctc-gaccgtgcttcgatcctacttacgaac 32775260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 646 - 738
Target Start/End: Complemental strand, 12859336 - 12859245
Alignment:
Q  646 tcaaggtagtcaggaacgagtcccggcatgtaggatcgcacgatcgtacgtgccacagcacctcgggccgtgcttcgatcctacttacgaacc 738  Q
    |||||||||||||||| ||||||| ||| |||||||||||||||| |||||||||||||||||| | |||||||||| |||||||||||||||    
T  12859336 tcaaggtagtcaggaatgagtcccagcacgtaggatcgcacgatcttacgtgccacagcacctc-gaccgtgcttcggtcctacttacgaacc 12859245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 645 - 690
Target Start/End: Complemental strand, 11600167 - 11600122
Alignment:
Q  645 gtcaaggtagtcaggaacgagtcccggcatgtaggatcgcacgatc 690  Q
    |||||||||| ||||| |||||||| || |||||||||||||||||    
T  11600167 gtcaaggtagccaggatcgagtcccagcttgtaggatcgcacgatc 11600122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 66; Significance: 1e-28; HSPs: 6)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 649 - 738
Target Start/End: Original strand, 1548139 - 1548227
Alignment:
Q  649 aggtagtcaggaacgagtcccggcatgtaggatcgcacgatcgtacgtgccacagcacctcgggccgtgcttcgatcctacttacgaacc 738  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| |  |||||||||||||||||||||||||    
T  1548139 aggtagtcaggaacgagtcccagcatgtaggatcgcacgatcttacgtgccacagcacctc-gaacgtgcttcgatcctacttacgaacc 1548227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 648 - 738
Target Start/End: Complemental strand, 34784608 - 34784519
Alignment:
Q  648 aaggtagtcaggaacgagtcccggcatgtaggatcgcacgatcgtacgtgccacagcacctcgggccgtgcttcgatcctacttacgaacc 738  Q
    |||||||||||||||||||||| ||| |||||||||||||||| |||||||||||||||||| | ||||||||||||||||||||| ||||    
T  34784608 aaggtagtcaggaacgagtcccagcacgtaggatcgcacgatcttacgtgccacagcacctc-gaccgtgcttcgatcctacttacaaacc 34784519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 646 - 738
Target Start/End: Original strand, 23033395 - 23033486
Alignment:
Q  646 tcaaggtagtcaggaacgagtcccggcatgtaggatcgcacgatcgtacgtgccacagcacctcgggccgtgcttcgatcctacttacgaacc 738  Q
    |||||||| ||||||||||||||| ||||||||||||||| |||| ||||||||||| |||||| | ||||||||||||||||||||||||||    
T  23033395 tcaaggtactcaggaacgagtcccagcatgtaggatcgcatgatcttacgtgccacaacacctc-gaccgtgcttcgatcctacttacgaacc 23033486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 651 - 738
Target Start/End: Original strand, 3117707 - 3117793
Alignment:
Q  651 gtagtcaggaacgagtcccggcatgtaggatcgcacgatcgtacgtgccacagcacctcgggccgtgcttcgatcctacttacgaacc 738  Q
    ||||||||||| ||||||| ||| |||||||||||||||| |||||||||||| ||||| | ||||||||||||||||||||||||||    
T  3117707 gtagtcaggaatgagtcccagcacgtaggatcgcacgatcttacgtgccacagtacctc-gaccgtgcttcgatcctacttacgaacc 3117793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 646 - 733
Target Start/End: Original strand, 3277517 - 3277603
Alignment:
Q  646 tcaaggtagtcaggaacgagtcccggcatgtaggatcgcacgatcgtacgtgccacagcacctcgggccgtgcttcgatcctacttac 733  Q
    ||||||||||||||||||| |||| |||||||||||||||||||| ||||||||||| |||||| | ||||||||| |||||||||||    
T  3277517 tcaaggtagtcaggaacgaatcccagcatgtaggatcgcacgatcttacgtgccacaacacctc-gaccgtgcttcaatcctacttac 3277603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 647 - 738
Target Start/End: Original strand, 20900774 - 20900864
Alignment:
Q  647 caaggtagtcaggaacgagtcccggcatgtaggatcgcacgatcgtacgtgccacagcacctcgggccgtgcttcgatcctacttacgaacc 738  Q
    |||||||||||||||| |||||| ||| |||||||||||||||| |||||||||||||||||| | | ||||||||||||||||||| ||||    
T  20900774 caaggtagtcaggaacaagtcccagcacgtaggatcgcacgatcttacgtgccacagcacctc-gactgtgcttcgatcctacttacaaacc 20900864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 66; Significance: 1e-28; HSPs: 6)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 649 - 738
Target Start/End: Original strand, 44673172 - 44673260
Alignment:
Q  649 aggtagtcaggaacgagtcccggcatgtaggatcgcacgatcgtacgtgccacagcacctcgggccgtgcttcgatcctacttacgaacc 738  Q
    ||||||||||||||||||||| ||| |||||||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||||    
T  44673172 aggtagtcaggaacgagtcccagcacgtaggatcgcacgatcttacgtgccacagcacctc-gaccgtgcttcgatcctacttacgaacc 44673260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 647 - 738
Target Start/End: Original strand, 25438287 - 25438377
Alignment:
Q  647 caaggtagtcaggaacgagtcccggcatgtaggatcgcacgatcgtacgtgccacagcacctcgggccgtgcttcgatcctacttacgaacc 738  Q
    ||||||||||||||||||||||| ||| ||||||||||| |||| |||||||||||||||||| | |||||||| |||||||||||||||||    
T  25438287 caaggtagtcaggaacgagtcccagcacgtaggatcgcatgatcttacgtgccacagcacctc-gaccgtgctttgatcctacttacgaacc 25438377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 647 - 698
Target Start/End: Original strand, 6536545 - 6536596
Alignment:
Q  647 caaggtagtcaggaacgagtcccggcatgtaggatcgcacgatcgtacgtgc 698  Q
    |||||||| ||||| |||||||| |||||||||||||||||||| |||||||    
T  6536545 caaggtagccaggatcgagtcccagcatgtaggatcgcacgatcttacgtgc 6536596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 651 - 701
Target Start/End: Complemental strand, 37154972 - 37154922
Alignment:
Q  651 gtagtcaggaacgagtcccggcatgtaggatcgcacgatcgtacgtgccac 701  Q
    ||||||| ||||||||||||||  |||||||||||||||| ||||||||||    
T  37154972 gtagtcaagaacgagtcccggctcgtaggatcgcacgatcttacgtgccac 37154922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 646 - 698
Target Start/End: Complemental strand, 21006427 - 21006375
Alignment:
Q  646 tcaaggtagtcaggaacgagtcccggcatgtaggatcgcacgatcgtacgtgc 698  Q
    ||||||||| ||||| |||||||| ||| |||||||||||||||| |||||||    
T  21006427 tcaaggtagccaggatcgagtcccagcacgtaggatcgcacgatcttacgtgc 21006375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 297 - 352
Target Start/End: Complemental strand, 3029625 - 3029570
Alignment:
Q  297 gagaaattaaagctacgttaagttactcatgatgaaattaggaaagagttatgctt 352  Q
    ||||||| ||| ||||||||| ||||||||||||||||  ||||| ||||||||||    
T  3029625 gagaaatgaaaactacgttaaattactcatgatgaaatctggaaatagttatgctt 3029570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 62; Significance: 2e-26; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 645 - 738
Target Start/End: Complemental strand, 13425768 - 13425676
Alignment:
Q  645 gtcaaggtagtcaggaacgagtcccggcatgtaggatcgcacgatcgtacgtgccacagcacctcgggccgtgcttcgatcctacttacgaacc 738  Q
    ||||||||||||||||||||||| | ||| |||||||||||||||| || ||||||||||||||| | ||||||||||||||||||||||||||    
T  13425768 gtcaaggtagtcaggaacgagtcgcagcacgtaggatcgcacgatcttatgtgccacagcacctc-gaccgtgcttcgatcctacttacgaacc 13425676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 60; Significance: 4e-25; HSPs: 5)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 647 - 738
Target Start/End: Complemental strand, 16498000 - 16497910
Alignment:
Q  647 caaggtagtcaggaacgagtcccggcatgtaggatcgcacgatcgtacgtgccacagcacctcgggccgtgcttcgatcctacttacgaacc 738  Q
    ||||||||||| ||||||||||| ||| ||||||||||||||||||| ||||||||||||||| | |||||||||| |||||||||||||||    
T  16498000 caaggtagtcaagaacgagtcccagcacgtaggatcgcacgatcgtatgtgccacagcacctc-gaccgtgcttcggtcctacttacgaacc 16497910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 649 - 738
Target Start/End: Complemental strand, 2588579 - 2588491
Alignment:
Q  649 aggtagtcaggaacgagtcccggcatgtaggatcgcacgatcgtacgtgccacagcacctcgggccgtgcttcgatcctacttacgaacc 738  Q
    ||||||||||||||||||||| ||| |||||||||||||||| |||||||||||||||||| | |||| ||||| |||||||||||||||    
T  2588579 aggtagtcaggaacgagtcccagcacgtaggatcgcacgatcttacgtgccacagcacctc-gaccgtacttcggtcctacttacgaacc 2588491  T

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Target: chr4; HSP #3
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 649 - 739
Target Start/End: Complemental strand, 5650847 - 5650758
Alignment:
Q  649 aggtagtcaggaacgagtcccggcatgtaggatcgcacgatcgtacgtgccacagcacctcgggccgtgcttcgatcctacttacgaacca 739  Q
    ||||||||||||||||||||  ||| |||||||||||| |||  ||||||||||||||||| | |||||||||||||||||||||||||||    
T  5650847 aggtagtcaggaacgagtccaagcacgtaggatcgcacaatctcacgtgccacagcacctc-gaccgtgcttcgatcctacttacgaacca 5650758  T

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Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 647 - 709
Target Start/End: Complemental strand, 52249575 - 52249513
Alignment:
Q  647 caaggtagtcaggaacgagtcccggcatgtaggatcgcacgatcgtacgtgccacagcacctc 709  Q
    ||||||||||||||| ||||||| | | |||||||||||||||| ||||||||||||||||||    
T  52249575 caaggtagtcaggaatgagtcccagtacgtaggatcgcacgatcttacgtgccacagcacctc 52249513  T

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Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 647 - 698
Target Start/End: Original strand, 28075449 - 28075500
Alignment:
Q  647 caaggtagtcaggaacgagtcccggcatgtaggatcgcacgatcgtacgtgc 698  Q
    |||||||| ||||| |||||||| || ||||||||||||||||| |||||||    
T  28075449 caaggtagccaggatcgagtcccagcttgtaggatcgcacgatcttacgtgc 28075500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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