View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5165_high_14 (Length: 413)
Name: NF5165_high_14
Description: NF5165
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5165_high_14 |
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Alignment Details
Target: chr1 (Bit Score: 373; Significance: 0; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 373; E-Value: 0
Query Start/End: Original strand, 9 - 397
Target Start/End: Original strand, 32460166 - 32460554
Alignment:
| Q |
9 |
acatcatcaccaactcaatggatcccaaaaccggcttcaattccatttccaaaaccttccacagtctcagacccccactcaaccttcctccaccacacgc |
108 |
Q |
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| T |
32460166 |
acatcatcaccaactcaatggatcccaaaaccggcttcaattccatttccaaaaccttccacagtctcagacccccactcaaccttcctccaccacacgc |
32460265 |
T |
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| Q |
109 |
caatatctccgccgcaacatacaccttctccctccaccactccgacttcaactccgactcaaacactctcctcgtcgactcaacaacatctcacaaactc |
208 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
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| T |
32460266 |
caatatctccgccgcaacatacaccttctccctccaccactctgacttcaactccgactcaaacactctcctcatcgactcaacaacatctcacaaactc |
32460365 |
T |
|
| Q |
209 |
tcttactccaccttcatccaacgctacaaaaccctcgcgaaaaacctcactctccgcggactcaccaaacaccacaccgcattcattctttccccaaacc |
308 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
32460366 |
tcttactccaccttcatccaacgctacaaaaccctcgcgaaaaacctcactctccgcggactcaccaaacaccacacctcattcattctttccccaaacc |
32460465 |
T |
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| Q |
309 |
tcgttcaggttccaatcctctacttcgcattgctctccattggcgtcgttgtttcaccaacaaacccaatttccactccctcagaaatt |
397 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
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| T |
32460466 |
tcgttcaggttccaatcctctacttcgcattgctctccattggcgtcgttgtttcaccaacaaacccaatctccactccctcagaaatt |
32460554 |
T |
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