View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5165_high_37 (Length: 253)

Name: NF5165_high_37
Description: NF5165
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5165_high_37
NF5165_high_37
[»] chr8 (40 HSPs)
chr8 (1-211)||(5035114-5035324)
chr8 (64-213)||(34992163-34992314)
chr8 (66-212)||(41859309-41859457)
chr8 (94-212)||(5034897-5035016)
chr8 (64-211)||(32536708-32536857)
chr8 (94-211)||(34992015-34992133)
chr8 (64-204)||(37639718-37639860)
chr8 (64-211)||(38023624-38023773)
chr8 (64-212)||(41859995-41860145)
chr8 (64-212)||(32537387-32537534)
chr8 (64-125)||(38024430-38024492)
chr8 (163-212)||(61453-61502)
chr8 (83-153)||(788084-788151)
chr8 (163-211)||(1365829-1365877)
chr8 (72-128)||(10501822-10501877)
chr8 (139-203)||(37640538-37640601)
chr8 (81-151)||(7818534-7818604)
chr8 (81-151)||(10806008-10806078)
chr8 (81-151)||(39852759-39852829)
chr8 (174-212)||(44098432-44098470)
chr8 (163-212)||(25876520-25876569)
chr8 (82-151)||(38778752-38778821)
chr8 (163-212)||(42346560-42346609)
chr8 (163-211)||(39254787-39254835)
chr8 (81-151)||(16889255-16889325)
chr8 (81-151)||(16889784-16889854)
chr8 (81-151)||(33114144-33114214)
chr8 (81-151)||(39852214-39852284)
chr8 (81-151)||(40309456-40309526)
chr8 (81-151)||(43591067-43591137)
chr8 (81-151)||(44062045-44062115)
chr8 (163-212)||(7424562-7424611)
chr8 (162-211)||(27918046-27918095)
chr8 (163-212)||(39255752-39255801)
chr8 (94-211)||(43924490-43924607)
chr8 (163-212)||(44751607-44751656)
chr8 (163-211)||(62240-62288)
chr8 (179-211)||(32536948-32536980)
chr8 (179-211)||(38023858-38023890)
chr8 (163-211)||(42345166-42345214)
[»] scaffold0041 (2 HSPs)
scaffold0041 (1-211)||(27221-27431)
scaffold0041 (134-211)||(27546-27623)
[»] chr7 (45 HSPs)
chr7 (1-211)||(38072128-38072339)
chr7 (1-209)||(7677647-7677855)
chr7 (1-207)||(4261209-4261416)
chr7 (64-211)||(17145622-17145772)
chr7 (98-211)||(38779498-38779611)
chr7 (64-212)||(38071897-38072047)
chr7 (64-211)||(668179-668328)
chr7 (64-212)||(41194512-41194659)
chr7 (64-212)||(37864206-37864356)
chr7 (64-212)||(4261495-4261645)
chr7 (95-212)||(38778853-38778971)
chr7 (64-211)||(669002-669151)
chr7 (64-207)||(7677421-7677566)
chr7 (130-211)||(37468972-37469053)
chr7 (94-211)||(17145802-17145920)
chr7 (64-187)||(32859257-32859380)
chr7 (154-212)||(37468909-37468967)
chr7 (100-211)||(24322288-24322399)
chr7 (94-197)||(40257594-40257697)
chr7 (94-197)||(42607095-42607198)
chr7 (113-214)||(44909309-44909410)
chr7 (94-197)||(6729412-6729515)
chr7 (163-206)||(42455040-42455083)
chr7 (81-151)||(27855625-27855695)
chr7 (72-126)||(41195275-41195329)
chr7 (113-211)||(41533896-41533994)
chr7 (66-172)||(33323807-33323915)
chr7 (120-197)||(40257759-40257836)
chr7 (119-211)||(27599211-27599303)
chr7 (107-211)||(27600039-27600143)
chr7 (179-210)||(668422-668453)
chr7 (162-213)||(29314579-29314630)
chr7 (101-212)||(29315249-29315360)
chr7 (81-151)||(4895038-4895108)
chr7 (81-151)||(24043999-24044069)
chr7 (162-212)||(29006346-29006396)
chr7 (81-151)||(32499829-32499898)
chr7 (81-151)||(36682895-36682965)
chr7 (81-151)||(46815018-46815088)
chr7 (81-151)||(47814031-47814101)
chr7 (163-204)||(20890206-20890247)
chr7 (179-212)||(37864091-37864124)
chr7 (97-153)||(8464445-8464501)
chr7 (164-212)||(45887981-45888029)
chr7 (164-212)||(47331954-47332002)
[»] chr3 (65 HSPs)
chr3 (1-206)||(36750050-36750256)
chr3 (1-213)||(52492116-52492329)
chr3 (64-212)||(36750337-36750486)
chr3 (64-210)||(45242067-45242215)
chr3 (64-215)||(32490094-32490247)
chr3 (64-211)||(19132711-19132860)
chr3 (64-211)||(45242886-45243035)
chr3 (56-210)||(38922744-38922900)
chr3 (64-212)||(44687062-44687212)
chr3 (64-209)||(3970994-3971141)
chr3 (94-211)||(19132563-19132681)
chr3 (94-211)||(32489946-32490064)
chr3 (64-212)||(44686254-44686403)
chr3 (64-211)||(38923564-38923713)
chr3 (64-209)||(3998740-3998887)
chr3 (64-212)||(41755498-41755648)
chr3 (64-212)||(41756331-41756481)
chr3 (64-180)||(45500504-45500620)
chr3 (64-212)||(3971801-3971951)
chr3 (64-212)||(3997927-3998077)
chr3 (64-211)||(52491891-52492035)
chr3 (73-181)||(8436574-8436682)
chr3 (73-187)||(8440119-8440233)
chr3 (64-153)||(8653622-8653710)
chr3 (164-211)||(31556217-31556264)
chr3 (81-151)||(8427276-8427346)
chr3 (64-153)||(11267588-11267676)
chr3 (162-210)||(42145277-42145325)
chr3 (165-211)||(17226968-17227014)
chr3 (81-151)||(25025234-25025304)
chr3 (81-151)||(31014880-31014950)
chr3 (81-151)||(47737629-47737699)
chr3 (179-211)||(38923438-38923470)
chr3 (179-211)||(45242309-45242341)
chr3 (164-211)||(31556188-31556235)
chr3 (162-213)||(37105076-37105127)
chr3 (64-111)||(50305167-50305214)
chr3 (81-151)||(3944955-3945025)
chr3 (81-151)||(8427699-8427769)
chr3 (162-212)||(14667296-14667345)
chr3 (81-151)||(19555879-19555949)
chr3 (81-151)||(31014397-31014467)
chr3 (162-200)||(37104363-37104401)
chr3 (81-151)||(37374875-37374945)
chr3 (81-151)||(41875572-41875642)
chr3 (169-211)||(42144369-42144411)
chr3 (81-151)||(42356765-42356835)
chr3 (81-151)||(44868574-44868644)
chr3 (81-151)||(48219191-48219261)
chr3 (81-151)||(49752333-49752403)
chr3 (81-151)||(49752866-49752936)
chr3 (162-212)||(49756274-49756324)
chr3 (81-151)||(50687664-50687734)
chr3 (81-151)||(55281895-55281965)
chr3 (96-182)||(55477956-55478042)
chr3 (170-211)||(17227955-17227996)
chr3 (163-216)||(25329958-25330011)
chr3 (163-212)||(43638078-43638127)
chr3 (162-211)||(49757181-49757230)
chr3 (179-211)||(3971235-3971267)
chr3 (179-211)||(3998614-3998646)
chr3 (105-153)||(8652868-8652916)
chr3 (163-211)||(39901846-39901894)
chr3 (179-211)||(41755731-41755763)
chr3 (83-151)||(42356296-42356364)
[»] chr4 (72 HSPs)
chr4 (56-211)||(39523164-39523319)
chr4 (64-212)||(11417686-11417836)
chr4 (64-212)||(10424958-10425108)
chr4 (64-212)||(21166274-21166424)
chr4 (64-212)||(29651231-29651381)
chr4 (64-211)||(10424123-10424272)
chr4 (56-207)||(38143628-38143781)
chr4 (64-212)||(26611182-26611332)
chr4 (64-211)||(36865616-36865765)
chr4 (64-210)||(29650416-29650564)
chr4 (94-211)||(11417867-11417985)
chr4 (64-206)||(26610350-26610495)
chr4 (64-211)||(38694850-38695002)
chr4 (94-214)||(31836390-31836511)
chr4 (64-211)||(45230365-45230514)
chr4 (64-211)||(45235859-45236008)
chr4 (64-212)||(39522374-39522524)
chr4 (94-212)||(9939301-9939420)
chr4 (64-211)||(21165447-21165596)
chr4 (66-212)||(9939124-9939269)
chr4 (64-211)||(31835148-31835297)
chr4 (94-210)||(36864818-36864935)
chr4 (94-193)||(38143506-38143606)
chr4 (64-181)||(17648044-17648162)
chr4 (94-211)||(38694702-38694820)
chr4 (56-173)||(11806129-11806244)
chr4 (64-197)||(36451327-36451461)
chr4 (64-197)||(25970120-25970250)
chr4 (64-194)||(23383327-23383457)
chr4 (70-197)||(36450742-36450871)
chr4 (63-212)||(25970701-25970852)
chr4 (1-51)||(39522605-39522655)
chr4 (119-211)||(30808621-30808713)
chr4 (163-214)||(47198602-47198653)
chr4 (162-213)||(47377597-47377648)
chr4 (83-153)||(5825392-5825459)
chr4 (163-206)||(3848578-3848621)
chr4 (95-177)||(35428091-35428173)
chr4 (162-211)||(37275088-37275137)
chr4 (158-211)||(47376852-47376905)
chr4 (179-211)||(10424387-10424419)
chr4 (105-153)||(12589345-12589393)
chr4 (179-211)||(21166137-21166169)
chr4 (163-211)||(25371545-25371593)
chr4 (179-211)||(29650657-29650689)
chr4 (179-211)||(31836221-31836253)
chr4 (111-211)||(38014870-38014970)
chr4 (179-211)||(45235733-45235765)
chr4 (163-206)||(3847891-3847934)
chr4 (81-151)||(199059-199129)
chr4 (162-204)||(12590202-12590244)
chr4 (81-151)||(20075585-20075655)
chr4 (81-197)||(26424360-26424476)
chr4 (163-209)||(30478884-30478930)
chr4 (81-151)||(31876848-31876918)
chr4 (107-197)||(45330579-45330669)
chr4 (81-151)||(48781542-48781612)
chr4 (81-151)||(52597667-52597737)
chr4 (163-205)||(55159186-55159228)
chr4 (81-151)||(55815885-55815955)
chr4 (163-212)||(30478308-30478357)
chr4 (107-212)||(30809449-30809554)
chr4 (163-212)||(42544487-42544536)
chr4 (105-214)||(46765110-46765219)
chr4 (163-212)||(47199395-47199444)
chr4 (163-212)||(48013316-48013365)
chr4 (140-204)||(10421558-10421622)
chr4 (81-128)||(20822706-20822754)
chr4 (179-211)||(26611056-26611088)
chr4 (141-197)||(41261136-41261192)
chr4 (82-170)||(51412637-51412724)
chr4 (99-167)||(53535835-53535903)
[»] chr5 (33 HSPs)
chr5 (56-212)||(33001931-33002087)
chr5 (64-212)||(8040194-8040344)
chr5 (64-212)||(33002715-33002865)
chr5 (64-211)||(15183916-15184065)
chr5 (64-210)||(687247-687395)
chr5 (66-212)||(8204119-8204267)
chr5 (64-211)||(686417-686565)
chr5 (109-212)||(36626576-36626679)
chr5 (84-212)||(12190078-12190207)
chr5 (64-211)||(15183088-15183238)
chr5 (94-212)||(8040374-8040493)
chr5 (100-212)||(33283960-33284072)
chr5 (1-51)||(33002584-33002634)
chr5 (164-211)||(39950404-39950451)
chr5 (73-154)||(42518809-42518891)
chr5 (100-207)||(33283169-33283276)
chr5 (81-151)||(3958090-3958160)
chr5 (101-211)||(16970971-16971081)
chr5 (163-212)||(13654932-13654981)
chr5 (179-211)||(686669-686701)
chr5 (163-211)||(14553667-14553715)
chr5 (179-211)||(39950448-39950480)
chr5 (162-212)||(2458353-2458403)
chr5 (81-151)||(3739060-3739130)
chr5 (81-151)||(28075925-28075995)
chr5 (81-151)||(42408521-42408591)
chr5 (162-211)||(4608589-4608638)
chr5 (132-177)||(33685779-33685824)
chr5 (165-206)||(39167442-39167483)
chr5 (179-211)||(15183780-15183812)
chr5 (163-211)||(26688166-26688214)
chr5 (163-211)||(26957897-26957945)
chr5 (97-153)||(38064835-38064891)
[»] chr1 (54 HSPs)
chr1 (56-197)||(6075988-6076127)
chr1 (64-211)||(193850-193997)
chr1 (64-211)||(16270207-16270357)
chr1 (94-211)||(23440795-23440913)
chr1 (64-211)||(43737729-43737878)
chr1 (66-212)||(48972346-48972494)
chr1 (64-212)||(51974436-51974586)
chr1 (64-211)||(51975126-51975275)
chr1 (84-211)||(9948807-9948935)
chr1 (64-211)||(23440617-23440765)
chr1 (64-187)||(12925897-12926020)
chr1 (64-211)||(16271047-16271196)
chr1 (56-211)||(38930312-38930469)
chr1 (94-212)||(43737908-43738027)
chr1 (66-211)||(50826992-50827138)
chr1 (64-211)||(9947995-9948144)
chr1 (56-211)||(48971705-48971862)
chr1 (64-187)||(20794313-20794436)
chr1 (64-193)||(47334217-47334347)
chr1 (64-187)||(31390726-31390847)
chr1 (64-197)||(6076767-6076901)
chr1 (64-181)||(17050483-17050600)
chr1 (64-209)||(38931145-38931293)
chr1 (63-211)||(47334798-47334948)
chr1 (117-182)||(27888700-27888765)
chr1 (1-51)||(6076636-6076686)
chr1 (112-181)||(40649516-40649585)
chr1 (97-177)||(46133727-46133807)
chr1 (163-211)||(51988464-51988512)
chr1 (163-212)||(51987826-51987875)
chr1 (165-213)||(48869767-48869815)
chr1 (72-211)||(194610-194749)
chr1 (162-212)||(1012546-1012596)
chr1 (162-212)||(1013471-1013521)
chr1 (81-151)||(7219068-7219138)
chr1 (64-153)||(27418221-27418311)
chr1 (81-151)||(51247888-51247958)
chr1 (81-151)||(51248439-51248509)
chr1 (95-181)||(51977130-51977216)
chr1 (73-130)||(13536362-13536418)
chr1 (163-212)||(35616775-35616824)
chr1 (163-211)||(8560839-8560887)
chr1 (179-211)||(16270901-16270933)
chr1 (179-211)||(38930576-38930608)
chr1 (83-153)||(27420214-27420282)
chr1 (81-152)||(37725438-37725509)
chr1 (90-177)||(41465270-41465357)
chr1 (81-151)||(41563748-41563818)
chr1 (81-151)||(49533803-49533873)
chr1 (95-153)||(50267620-50267678)
chr1 (107-212)||(11032163-11032268)
chr1 (82-181)||(42645960-42646056)
chr1 (163-211)||(37874064-37874112)
chr1 (179-211)||(51974979-51975011)
[»] chr6 (30 HSPs)
chr6 (56-211)||(33480519-33480676)
chr6 (64-211)||(22579935-22580084)
chr6 (64-206)||(15082402-15082546)
chr6 (64-209)||(3542816-3542963)
chr6 (64-211)||(15083217-15083366)
chr6 (64-211)||(33018167-33018316)
chr6 (109-212)||(7193337-7193440)
chr6 (94-211)||(3542993-3543111)
chr6 (64-209)||(33479698-33479846)
chr6 (68-207)||(22587213-22587354)
chr6 (94-214)||(33018346-33018467)
chr6 (94-212)||(7193508-7193627)
chr6 (134-207)||(22582450-22582523)
chr6 (163-212)||(7532440-7532489)
chr6 (163-205)||(26227408-26227450)
chr6 (162-211)||(24125972-24126021)
chr6 (158-211)||(24126713-24126766)
chr6 (163-211)||(7531829-7531877)
chr6 (179-211)||(15082640-15082672)
chr6 (179-211)||(22580597-22580629)
chr6 (179-211)||(22587083-22587115)
chr6 (179-211)||(33479940-33479972)
chr6 (163-214)||(14337557-14337608)
chr6 (81-151)||(6032709-6032779)
chr6 (81-151)||(13944350-13944420)
chr6 (107-197)||(25067794-25067884)
chr6 (100-190)||(29290144-29290234)
chr6 (81-151)||(30610771-30610841)
chr6 (81-151)||(30611301-30611371)
chr6 (163-211)||(9574571-9574619)
[»] chr2 (28 HSPs)
chr2 (64-211)||(4479603-4479750)
chr2 (64-211)||(21471853-21472002)
chr2 (64-212)||(21471016-21471166)
chr2 (64-216)||(38834382-38834536)
chr2 (98-211)||(14573261-14573374)
chr2 (94-212)||(37547997-37548116)
chr2 (94-211)||(13134318-13134436)
chr2 (109-212)||(14573945-14574048)
chr2 (94-212)||(38834566-38834685)
chr2 (83-197)||(36391592-36391706)
chr2 (163-211)||(33433160-33433208)
chr2 (72-212)||(4478850-4478990)
chr2 (165-212)||(45139691-45139738)
chr2 (163-213)||(5276463-5276513)
chr2 (81-151)||(11256696-11256766)
chr2 (81-151)||(20244127-20244197)
chr2 (179-212)||(1164792-1164825)
chr2 (96-211)||(30544727-30544842)
chr2 (81-151)||(11256176-11256246)
chr2 (81-151)||(17918641-17918711)
chr2 (81-151)||(28224344-28224414)
chr2 (81-151)||(33847933-33848003)
chr2 (81-151)||(39476575-39476645)
chr2 (81-151)||(39477281-39477351)
chr2 (178-211)||(17069121-17069154)
chr2 (163-212)||(19521917-19521966)
chr2 (105-197)||(36390971-36391063)
chr2 (113-193)||(36476696-36476776)
[»] scaffold0311 (1 HSPs)
scaffold0311 (64-213)||(58-210)
[»] scaffold0332 (1 HSPs)
scaffold0332 (69-211)||(9162-9306)
[»] scaffold0700 (1 HSPs)
scaffold0700 (73-169)||(5361-5457)
[»] scaffold0007 (1 HSPs)
scaffold0007 (81-151)||(11325-11395)
[»] scaffold2003 (1 HSPs)
scaffold2003 (100-153)||(649-702)
[»] scaffold1037 (1 HSPs)
scaffold1037 (163-212)||(2899-2948)
[»] scaffold1031 (1 HSPs)
scaffold1031 (163-212)||(3018-3067)


Alignment Details
Target: chr8 (Bit Score: 195; Significance: 1e-106; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 211
Target Start/End: Original strand, 5035114 - 5035324
Alignment:
Q  1 tggttgctgccggaaaacttgttaacgtaccattttcaaggatcaaacaaatttagtgtgagaacatgaaagagagagggtggaagatagtgtaaaaaat 100  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  5035114 tggttgctgccggaaaacttgttagtgtaccattttcaaggatcaaacaaatttagtgtgagaacatgaaagagagagggtggaagatagtgtaaaacat 5035213  T
Q  101 aatttagtgttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatcaactttcccatggtggaaaagaactctcctttcccaaat 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  5035214 aatttagtgttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatcaactttcctatggtggaaaagaactctcctttcccaaat 5035313  T
Q  201 taaatggcacc 211  Q
    |||||||||||    
T  5035314 taaatggcacc 5035324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 64 - 213
Target Start/End: Original strand, 34992163 - 34992314
Alignment:
Q  64 acatgaaagagagagggtggaagatagtgtaaaaaa-taatttagtg-ttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatc 161  Q
    ||||||||||||||| ||| |||||||| ||||||| |||||||||| |||||||||||||||| |||| | ||||||||||||||||||||||||||||    
T  34992163 acatgaaagagagagtgtgaaagatagtataaaaaaataatttagtggttgagagagtatgataggaatatgttcctcatttaatctaatggacatgatc 34992262  T
Q  162 aactttcccatggtggaaaagaactctcctttcccaaattaaatggcacctc 213  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  34992263 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacctc 34992314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 66 - 212
Target Start/End: Complemental strand, 41859457 - 41859309
Alignment:
Q  66 atgaaagagagagggtggaagatagtgtaaaaaa-taatttagtg-ttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatcaa 163  Q
    ||||||||||||| ||| |||||||| ||||||| |||| ||||| |||||||||||||||| |||| | ||| ||||||||||||| ||||||||||||    
T  41859457 atgaaagagagagtgtgaaagatagtataaaaaaataatctagtggttgagagagtatgatatgaatatgttcttcatttaatctaacggacatgatcaa 41859358  T
Q  164 ctttcccatggtggaaaagaactctcctttcccaaattaaatggcacct 212  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  41859357 ctttcccatggtgggaaagaactctcctttcccaaattaaatggcacct 41859309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 94 - 212
Target Start/End: Complemental strand, 5035016 - 5034897
Alignment:
Q  94 aaaaaataatttagtg-ttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatcaactttcccatggtggaaaagaactctcctt 192  Q
    |||||||||| ||||| |||||||||||||||| |||| | ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  5035016 aaaaaataatctagtggttgagagagtatgatatgaatatgttcctcattcaatctaatggacatgatcaactttcccatggtggaaaagaactctcctt 5034917  T
Q  193 tcccaaattaaatggcacct 212  Q
    ||||||||||||||||||||    
T  5034916 tcccaaattaaatggcacct 5034897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 64 - 211
Target Start/End: Complemental strand, 32536857 - 32536708
Alignment:
Q  64 acatgaaagagagagggtggaagatagtgtaaaaaa-taatttagtg-ttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatc 161  Q
    ||||||||||||||| ||| |||||||| ||||||| |||| ||||| |||||||||||||||| |||| | |||| |||||||||||||||||||||||    
T  32536857 acatgaaagagagagtgtgaaagatagtataaaaaaataatctagtggttgagagagtatgataggaatatgttccccatttaatctaatggacatgatc 32536758  T
Q  162 aactttcccatggtggaaaagaactctcctttcccaaattaaatggcacc 211  Q
    |||||||||||||||| ||||||||||| ||||| |||||||||||||||    
T  32536757 aactttcccatggtgggaaagaactctcatttcctaaattaaatggcacc 32536708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 94 - 211
Target Start/End: Complemental strand, 34992133 - 34992015
Alignment:
Q  94 aaaaaataatttagtg-ttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatcaactttcccatggtggaaaagaactctcctt 192  Q
    |||||||||||||||| ||||||||||||||||  ||| | |||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| ||    
T  34992133 aaaaaataatttagtggttgagagagtatgatagaaatatgttcctcatttaatctaatggacatgatcaacttttccatggtggaaaataactctcgtt 34992034  T
Q  193 tcccaaattaaatggcacc 211  Q
    |||||||||||||||||||    
T  34992033 tcccaaattaaatggcacc 34992015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 64 - 204
Target Start/End: Complemental strand, 37639860 - 37639718
Alignment:
Q  64 acatgaaagagagagggtggaagatagtgtaaaaaa-taatttagtg-ttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatc 161  Q
    ||||||||||||||| ||| |||||||| ||||||| |||| ||||| |||||||||||| ||| |||| | ||||||||||||||||||| | ||||||    
T  37639860 acatgaaagagagagtgtgaaagatagtataaaaaaataatctagtggttgagagagtatcataggaatatgttcctcatttaatctaatgaatatgatc 37639761  T
Q  162 aactttcccatggtggaaaagaactctcctttcccaaattaaa 204  Q
    |||||||||||||||| ||||||||||||||||||||||||||    
T  37639760 aactttcccatggtgggaaagaactctcctttcccaaattaaa 37639718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 64 - 211
Target Start/End: Complemental strand, 38023773 - 38023624
Alignment:
Q  64 acatgaaagagagagggtggaagatagtgtaaaaaa-taatttagtg-ttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatc 161  Q
    ||||||||||||||| ||| |||||||| ||||||| |||| ||||| ||||||||||||||||  ||| | ||||||||||||||||||| ||||||||    
T  38023773 acatgaaagagagagtgtgaaagatagtataaaaaaataatctagtggttgagagagtatgatagaaatatgttcctcatttaatctaatgaacatgatc 38023674  T
Q  162 aactttcccatggtggaaaagaactctcctttcccaaattaaatggcacc 211  Q
    |||||| ||||| |||||||||| ||||||||||||||||||||| ||||    
T  38023673 aacttttccatgatggaaaagaattctcctttcccaaattaaatgacacc 38023624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 64 - 212
Target Start/End: Original strand, 41859995 - 41860145
Alignment:
Q  64 acatgaaagagagagggtggaagatagtgtaaaaaa-taatttagtg-ttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatc 161  Q
    ||||||||||||||| ||| |||||||| ||||||| |||| ||||| |||||| |||||||||  ||| | ||||||||||||||||||||||||||||    
T  41859995 acatgaaagagagagtgtgaaagatagtataaaaaaataatatagtggttgagaaagtatgatagaaatatgttcctcatttaatctaatggacatgatc 41860094  T
Q  162 aactttcccatggtggaaaagaactctcctttcccaaattaaatggcacct 212  Q
    |||||| |||| ||  |||| |||||| |||||||||||||||||||||||    
T  41860095 aacttttccatagtaaaaaataactcttctttcccaaattaaatggcacct 41860145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 64 - 212
Target Start/End: Original strand, 32537387 - 32537534
Alignment:
Q  64 acatgaaagagagagggtggaagatagtgtaaaaaa-taatttagtg-ttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatc 161  Q
    ||||||||||||||| | | |||||||| ||||||| |||| ||||| ||||||||||||||||||||| | ||||| ||||||| |||||||||||||     
T  32537387 acatgaaagagagagtgcgaaagatagtataaaaaaataatctagtggttgagagagtatgataagaatatgttccttatttaatataatggacatgatt 32537486  T
Q  162 aactttcccatggtggaaaagaactctcctttcccaaattaaatggcacct 212  Q
    ||||||| ||   ||||||||||||||| ||||||||||||||||| ||||    
T  32537487 aactttctca---tggaaaagaactctcatttcccaaattaaatggtacct 32537534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 64 - 125
Target Start/End: Original strand, 38024430 - 38024492
Alignment:
Q  64 acatgaaagagagagggtggaagatagtgtaaaaaataatttagt-gttgagagagtatgata 125  Q
    ||||||||||||||| ||| |||||||| ||||||||||| |||| |||||||||||||||||    
T  38024430 acatgaaagagagagtgtgaaagatagtataaaaaataatctagtggttgagagagtatgata 38024492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 163 - 212
Target Start/End: Complemental strand, 61502 - 61453
Alignment:
Q  163 actttcccatggtggaaaagaactctcctttcccaaattaaatggcacct 212  Q
    ||||||||||||||| |||||| ||||||||||||||||||||| |||||    
T  61502 actttcccatggtgggaaagaagtctcctttcccaaattaaatgccacct 61453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 83 - 153
Target Start/End: Complemental strand, 788151 - 788084
Alignment:
Q  83 gaagatagtgtaaaaaataatttagtgttgagagagtatgataagaatgtattcctcatttaatctaatgg 153  Q
    ||||||||||||||||||   ||||||||||||| ||| ||||| ||||| |||||||||| |||||||||    
T  788151 gaagatagtgtaaaaaat---ttagtgttgagagggtaggataataatgtgttcctcatttgatctaatgg 788084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 163 - 211
Target Start/End: Complemental strand, 1365877 - 1365829
Alignment:
Q  163 actttcccatggtggaaaagaactctcctttcccaaattaaatggcacc 211  Q
    ||||||||||||||| |||||| ||||||||||||||||||||| ||||    
T  1365877 actttcccatggtgggaaagaagtctcctttcccaaattaaatgccacc 1365829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 72 - 128
Target Start/End: Original strand, 10501822 - 10501877
Alignment:
Q  72 gagagagggtggaagatagtgtaaaaaataatttagtgttgagagagtatgataaga 128  Q
    |||||||||| || |||||||||||||||||| |||||||||| |||||||||||||    
T  10501822 gagagagggttgatgatagtgtaaaaaataatctagtgttgag-gagtatgataaga 10501877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 139 - 203
Target Start/End: Original strand, 37640538 - 37640601
Alignment:
Q  139 catttaatctaatggacatgatcaactttcccatggtggaaaagaactctcctttcccaaattaa 203  Q
    |||||||||||||  ||||||||||||| ||||| ||| |||| |||||||||||||||||||||    
T  37640538 catttaatctaataaacatgatcaactt-cccatagtgtaaaaaaactctcctttcccaaattaa 37640601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 81 - 151
Target Start/End: Complemental strand, 7818604 - 7818534
Alignment:
Q  81 tggaagatagtgtaaaaaataatttagtgttgagagagtatgataagaatgtattcctcatttaatctaat 151  Q
    ||||||||||||| || || ||| |||||||||||||| ||||||||||| | ||| ||| ||||||||||    
T  7818604 tggaagatagtgtgaagaaaaatctagtgttgagagagcatgataagaatatgttcttcacttaatctaat 7818534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 81 - 151
Target Start/End: Complemental strand, 10806078 - 10806008
Alignment:
Q  81 tggaagatagtgtaaaaaataatttagtgttgagagagtatgataagaatgtattcctcatttaatctaat 151  Q
    ||||||||||||| || || ||| |||||||||||||| ||| ||||||| | ||| ||||||||||||||    
T  10806078 tggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcatttaatctaat 10806008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 81 - 151
Target Start/End: Original strand, 39852759 - 39852829
Alignment:
Q  81 tggaagatagtgtaaaaaataatttagtgttgagagagtatgataagaatgtattcctcatttaatctaat 151  Q
    ||||||||||||| || || ||| |||||||||||||| ||| ||||||| ||||| ||| ||||||||||    
T  39852759 tggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatattcttcacttaatctaat 39852829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 174 - 212
Target Start/End: Original strand, 44098432 - 44098470
Alignment:
Q  174 gtggaaaagaactctcctttcccaaattaaatggcacct 212  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  44098432 gtgggaaagaactctcctttcccaaattaaatggcacct 44098470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 163 - 212
Target Start/End: Complemental strand, 25876569 - 25876520
Alignment:
Q  163 actttcccatggtggaaaagaactctcctttcccaaattaaatggcacct 212  Q
    ||||||||||||||| ||| || ||| |||||||||||||||||||||||    
T  25876569 actttcccatggtgggaaaaaaatcttctttcccaaattaaatggcacct 25876520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 82 - 151
Target Start/End: Original strand, 38778752 - 38778821
Alignment:
Q  82 ggaagatagtgtaaaaaataatttagtgttgagagagtatgataagaatgtattcctcatttaatctaat 151  Q
    |||||||||||| || || ||| |||||||||||||||||| ||| ||| ||||| ||| ||||||||||    
T  38778752 ggaagatagtgtgaagaaaaatctagtgttgagagagtatgttaaaaatatattcttcacttaatctaat 38778821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 163 - 212
Target Start/End: Original strand, 42346560 - 42346609
Alignment:
Q  163 actttcccatggtggaaaagaactctcctttcccaaattaaatggcacct 212  Q
    ||||||||||| |||||||||| | | |||||||||||||||||||||||    
T  42346560 actttcccatgatggaaaagaagtttgctttcccaaattaaatggcacct 42346609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 211
Target Start/End: Complemental strand, 39254835 - 39254787
Alignment:
Q  163 actttcccatggtggaaaagaactctcctttcccaaattaaatggcacc 211  Q
    ||||||| ||||||| |||||| ||||||||||||||||||||| ||||    
T  39254835 actttcctatggtgggaaagaagtctcctttcccaaattaaatgccacc 39254787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 151
Target Start/End: Complemental strand, 16889325 - 16889255
Alignment:
Q  81 tggaagatagtgtaaaaaataatttagtgttgagagagtatgataagaatgtattcctcatttaatctaat 151  Q
    ||||||||||||| || || ||| ||||||||| |||| ||||||||||| | ||| ||| ||||||||||    
T  16889325 tggaagatagtgtgaagaaaaatctagtgttgaaagagcatgataagaatatgttcttcacttaatctaat 16889255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 151
Target Start/End: Original strand, 16889784 - 16889854
Alignment:
Q  81 tggaagatagtgtaaaaaataatttagtgttgagagagtatgataagaatgtattcctcatttaatctaat 151  Q
    ||||||||||||| || || ||| |||||||||||||| ||| ||||||| | ||| ||| ||||||||||    
T  16889784 tggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaat 16889854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 151
Target Start/End: Original strand, 33114144 - 33114214
Alignment:
Q  81 tggaagatagtgtaaaaaataatttagtgttgagagagtatgataagaatgtattcctcatttaatctaat 151  Q
    ||||||||||||| || || ||| |||||||||||||| ||| ||||||| | ||| ||| ||||||||||    
T  33114144 tggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaat 33114214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 151
Target Start/End: Complemental strand, 39852284 - 39852214
Alignment:
Q  81 tggaagatagtgtaaaaaataatttagtgttgagagagtatgataagaatgtattcctcatttaatctaat 151  Q
    ||||||||||||| ||||| ||| |||||||||| ||| ||| ||||||| | ||| ||| ||||||||||    
T  39852284 tggaagatagtgtgaaaaaaaatctagtgttgagggagcatgttaagaatatgttcttcacttaatctaat 39852214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 151
Target Start/End: Original strand, 40309456 - 40309526
Alignment:
Q  81 tggaagatagtgtaaaaaataatttagtgttgagagagtatgataagaatgtattcctcatttaatctaat 151  Q
    ||||||||||||| || || ||| |||||||||||||| ||| ||||||| | ||| ||| ||||||||||    
T  40309456 tggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaat 40309526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 151
Target Start/End: Complemental strand, 43591137 - 43591067
Alignment:
Q  81 tggaagatagtgtaaaaaataatttagtgttgagagagtatgataagaatgtattcctcatttaatctaat 151  Q
    ||||||||||||| || || ||| |||||||||||||  ||| ||||||| | ||| ||||||||||||||    
T  43591137 tggaagatagtgtgaagaaaaatctagtgttgagagatcatgttaagaatatgttcttcatttaatctaat 43591067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 151
Target Start/End: Complemental strand, 44062115 - 44062045
Alignment:
Q  81 tggaagatagtgtaaaaaataatttagtgttgagagagtatgataagaatgtattcctcatttaatctaat 151  Q
    ||||||||||||| || || ||| |||||||||||||| ||| ||||||| | ||| ||| ||||||||||    
T  44062115 tggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaat 44062045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 163 - 212
Target Start/End: Original strand, 7424562 - 7424611
Alignment:
Q  163 actttcccatggtggaaaagaactctcctttcccaaattaaatggcacct 212  Q
    ||||||||||||||||||| || ||| ||||| |||||||||| ||||||    
T  7424562 actttcccatggtggaaaaaaagtcttctttctcaaattaaattgcacct 7424611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 162 - 211
Target Start/End: Original strand, 27918046 - 27918095
Alignment:
Q  162 aactttcccatggtggaaaagaactctcctttcccaaattaaatggcacc 211  Q
    |||||||||||||||| ||| || |||| |||||||||||||| ||||||    
T  27918046 aactttcccatggtgggaaaaaagtctcatttcccaaattaaacggcacc 27918095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 163 - 212
Target Start/End: Original strand, 39255752 - 39255801
Alignment:
Q  163 actttcccatggtggaaaagaactctcctttcccaaattaaatggcacct 212  Q
    ||||||||||||||| |||||| |||| |||||||| ||||||| |||||    
T  39255752 actttcccatggtgggaaagaagtctcatttcccaagttaaatgccacct 39255801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 94 - 211
Target Start/End: Complemental strand, 43924607 - 43924490
Alignment:
Q  94 aaaaaataatttagtgttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatcaactttcccatggtggaaaagaactctccttt 193  Q
    |||||| ||||| |||||||| |  |||||||| ||| | |||   ||||||||||| || ||  || | |||||||||||||| ||| ||||  |||||    
T  43924607 aaaaaaaaatttggtgttgagtgtttatgataaaaatatgttctctatttaatctaacggtcaaaattagctttcccatggtgggaaacaacttcccttt 43924508  T
Q  194 cccaaattaaatggcacc 211  Q
    ||||||||||||| ||||    
T  43924507 cccaaattaaatgccacc 43924490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 163 - 212
Target Start/End: Complemental strand, 44751656 - 44751607
Alignment:
Q  163 actttcccatggtggaaaagaactctcctttcccaaattaaatggcacct 212  Q
    ||||||||||| ||| |||||| ||||||||||||| ||||||| |||||    
T  44751656 actttcccatgatgggaaagaagtctcctttcccaagttaaatgccacct 44751607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 211
Target Start/End: Original strand, 62240 - 62288
Alignment:
Q  163 actttcccatggtggaaaagaactctcctttcccaaattaaatggcacc 211  Q
    ||||||| ||||||| |||||| ||||||||| ||||||||||| ||||    
T  62240 actttcctatggtgggaaagaagtctcctttctcaaattaaatgtcacc 62288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 211
Target Start/End: Original strand, 32536948 - 32536980
Alignment:
Q  179 aaagaactctcctttcccaaattaaatggcacc 211  Q
    ||||||||||||||| |||||||||||||||||    
T  32536948 aaagaactctccttttccaaattaaatggcacc 32536980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 211
Target Start/End: Original strand, 38023858 - 38023890
Alignment:
Q  179 aaagaactctcctttcccaaattaaatggcacc 211  Q
    ||||||||||||||||||||||||||| |||||    
T  38023858 aaagaactctcctttcccaaattaaatagcacc 38023890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 211
Target Start/End: Complemental strand, 42345214 - 42345166
Alignment:
Q  163 actttcccatggtggaaaagaactctcctttcccaaattaaatggcacc 211  Q
    ||||||||||| ||| |||||| | | ||||||||||||||||||||||    
T  42345214 actttcccatgatgggaaagaagtttactttcccaaattaaatggcacc 42345166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 191; Significance: 1e-104; HSPs: 2)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 27431 - 27221
Alignment:
Q  1 tggttgctgccggaaaacttgttaacgtaccattttcaaggatcaaacaaatttagtgtgagaacatgaaagagagagggtggaagatagtgtaaaaaat 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  27431 tggttgctgccggaaaacttgttagcgtaccattttcaaggatcaaacaaatttagtatgagaacatgaaagagagagggtggaagatagtgtaaaaaat 27332  T
Q  101 aatttagtgttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatcaactttcccatggtggaaaagaactctcctttcccaaat 200  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  27331 aatttagtgttgagagagtatgataagaatgtgttcctcatttaatctaatggacatgatcaactttcccatgatgggaaagaactctcctttcccaaat 27232  T
Q  201 taaatggcacc 211  Q
    |||||||||||    
T  27231 taaatggcacc 27221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 134 - 211
Target Start/End: Original strand, 27546 - 27623
Alignment:
Q  134 ttcctcatttaatctaatggacatgatcaactttcccatggtggaaaagaactctcctttcccaaattaaatggcacc 211  Q
    ||||||||||||||||||||| |||||||||||||||||||||| ||| ||||||||||| |||||||||||||||||    
T  27546 ttcctcatttaatctaatggatatgatcaactttcccatggtgggaaaaaactctccttttccaaattaaatggcacc 27623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 188; Significance: 1e-102; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 1 - 211
Target Start/End: Original strand, 38072128 - 38072339
Alignment:
Q  1 tggttgctgccggaaaacttgttaacgtaccattttcaaggatcaaacaaatttagtgtgagaacatgaaagagagagggtggaagatagtgtaaaaaat 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38072128 tggttgctgccggaaaacttgttagcgtaccattttcaaggatcaaacaaatttagtgtgagaacatgaaagagagagggtggaagatagtgtaaaaaat 38072227  T
Q  101 aatttagt-gttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatcaactttcccatggtggaaaagaactctcctttcccaaa 199  Q
    ||| |||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  38072228 aatctagtggttgagagagtatgataagaatgtattcatcatttaatctaatggacatgatcaactttcccatggtggaaaagaactctcatttcccaaa 38072327  T
Q  200 ttaaatggcacc 211  Q
    ||||||||||||    
T  38072328 ttaaatggcacc 38072339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 7677647 - 7677855
Alignment:
Q  1 tggttgctgccggaaaacttgttaacgtaccattttcaaggatcaaacaaatttagtgtgagaacatgaaagagagagggtggaagatagtgtaaaaaat 100  Q
    ||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  7677647 tggttgctgtcggaaaacttgttagcgtaccattttcaaggatcaaacaaatttagtgtgagaacatgaaagagagagggtggaagatattgtaaaaaat 7677746  T
Q  101 aatttagtgttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatcaactttcccatggtggaaaagaactctcctttcccaaat 200  Q
    ||||||||||||||||| |||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  7677747 aatttagtgttgagagaatatgataagaatgtgttcctcatttaatctaatgaacatgatcaactttcccatggtgggaaagaactctcctttcccaaat 7677846  T
Q  201 taaatggca 209  Q
    |||||||||    
T  7677847 taaatggca 7677855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 4261416 - 4261209
Alignment:
Q  1 tggttgctgccggaaaacttgttaacgtaccattttcaaggatcaaacaaatttagtgtgagaacatgaaagagagagggtggaagatagtgtaaaaaat 100  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||    
T  4261416 tggttgctgccggaaaacttgttagcataccattttcaaggatcaaacaaatatagtgtgagaacatgaaagagagaggttggaagatagtgtaaaaaat 4261317  T
Q  101 aatttagtg-ttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatcaactttcccatggtggaaaagaactctcctttcccaaa 199  Q
    ||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||    
T  4261316 aatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatcaactttcccatggtagaaaagaactctcctttcctaaa 4261217  T
Q  200 ttaaatgg 207  Q
    ||||||||    
T  4261216 ttaaatgg 4261209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 64 - 211
Target Start/End: Complemental strand, 17145772 - 17145622
Alignment:
Q  64 acatgaaagagagagggtggaagatagtgtaaaaaa--taatttagtg-ttgagagagtatgataagaatgtattcctcatttaatctaatggacatgat 160  Q
    ||||||||||||||| ||| |||||||| |||||||  |||| ||||| |||||||||||||||| |||| | |||||||||||||||||||||||||||    
T  17145772 acatgaaagagagagtgtgaaagatagtataaaaaaaataatctagtggttgagagagtatgataggaatatgttcctcatttaatctaatggacatgat 17145673  T
Q  161 caactttcccatggtggaaaagaactctcctttcccaaattaaatggcacc 211  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  17145672 caactttcccatggtgggaaagaactctcctttcccaaattaaatggcacc 17145622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 98 - 211
Target Start/End: Original strand, 38779498 - 38779611
Alignment:
Q  98 aataatttagtgttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatcaactttcccatggtggaaaagaactctcctttccca 197  Q
    |||||| ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  38779498 aataatctagtgttgagagagtattataagaatatattcctcatttaatctaatggacatgatcaactttcccatggtgggaaagaactctcctttccca 38779597  T
Q  198 aattaaatggcacc 211  Q
    ||||||||||||||    
T  38779598 aattaaatggcacc 38779611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 64 - 212
Target Start/End: Complemental strand, 38072047 - 38071897
Alignment:
Q  64 acatgaaagagagagggtggaagatagtgtaaaaaa-taatttagtg-ttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatc 161  Q
    ||||||||||||||| ||| |||||||| ||||||| |||| ||||| |||||||||||||||| |||| | ||||||||||||||||||||||||||||    
T  38072047 acatgaaagagagagtgtgaaagatagtataaaaaaataatctagtggttgagagagtatgataggaatatgttcctcatttaatctaatggacatgatc 38071948  T
Q  162 aactttcccatggtggaaaagaactctcctttcccaaattaaatggcacct 212  Q
    |||||||||||| ||| ||||||||||||||||| ||||||||||||||||    
T  38071947 aactttcccatgatgggaaagaactctcctttcctaaattaaatggcacct 38071897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 64 - 211
Target Start/End: Complemental strand, 668328 - 668179
Alignment:
Q  64 acatgaaagagagagggtggaagatagtgtaaaaaa-taatttagtg-ttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatc 161  Q
    ||||||||||||||| ||| |||||||| ||||||| |||| | ||| |||||||||||||||| |||| | ||| ||||||||||||||||||||||||    
T  668328 acatgaaagagagagtgtgaaagatagtataaaaaaataatctggtggttgagagagtatgataggaatatgttcttcatttaatctaatggacatgatc 668229  T
Q  162 aactttcccatggtggaaaagaactctcctttcccaaattaaatggcacc 211  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  668228 aactttcccatggtgggaaagaactctcctttcccaaattaaatggcacc 668179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 64 - 212
Target Start/End: Complemental strand, 41194659 - 41194512
Alignment:
Q  64 acatgaaagagagagggtggaagatagtgtaaaaaataatttagtgttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatcaa 163  Q
    |||||||||||||| | || |||||| | |||||||||||||||||| || |||||||||||||||| | ||||||||| ||| ||||||||||||| ||    
T  41194659 acatgaaagagagatgatgaaagataatataaaaaataatttagtgtggaaagagtatgataagaatatgttcctcatt-aatttaatggacatgattaa 41194561  T
Q  164 ctttcccatggtggaaaagaactctcctttcccaaattaaatggcacct 212  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  41194560 ctttcccatggtgggaaagaactctcctttcccaaattaaatggcacct 41194512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 64 - 212
Target Start/End: Original strand, 37864206 - 37864356
Alignment:
Q  64 acatgaaagagagagggtggaagatagtgtaaaaaa-taatttagtg-ttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatc 161  Q
    ||||||||||||||| ||| |||||||| ||||||| |||| ||||| |||||||||||||||| |||| | || |||||||||||||||||||||||||    
T  37864206 acatgaaagagagagtgtgaaagatagtataaaaaaataatctagtggttgagagagtatgataggaatatgtttctcatttaatctaatggacatgatc 37864305  T
Q  162 aactttcccatggtggaaaagaactctcctttcccaaattaaatggcacct 212  Q
    |||||||||||||||| ||||||||||  ||||||||||||||||||||||    
T  37864306 aactttcccatggtgggaaagaactcttatttcccaaattaaatggcacct 37864356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 64 - 212
Target Start/End: Original strand, 4261495 - 4261645
Alignment:
Q  64 acatgaaagagagagggtggaagatagtgtaaaaaa-taatttagtg-ttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatc 161  Q
    ||||||||||||||| ||| |||||||| ||||||| |||| || || ||||||||||||||||  ||| | ||||||||||||||||||||| ||||||    
T  4261495 acatgaaagagagagtgtgaaagatagtataaaaaaataatctaatggttgagagagtatgatagaaatatgttcctcatttaatctaatggagatgatc 4261594  T
Q  162 aactttcccatggtggaaaagaactctcctttcccaaattaaatggcacct 212  Q
    |||||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  4261595 aactttcccatggtgggaaagaactctcctttcctaaattaaatggcacct 4261645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 95 - 212
Target Start/End: Complemental strand, 38778971 - 38778853
Alignment:
Q  95 aaaaataatttagtg-ttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatcaactttcccatggtggaaaagaactctccttt 193  Q
    ||||||||| ||||| |||||||||||||||| |||| |  |||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||    
T  38778971 aaaaataatctagtggttgagagagtatgataggaatatgctcctcatttaatctaatggatatgatcaactttcccatggtgggaaagaactctccttt 38778872  T
Q  194 cccaaattaaatggcacct 212  Q
    |||||||||||||||||||    
T  38778871 cccaaattaaatggcacct 38778853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 64 - 211
Target Start/End: Original strand, 669002 - 669151
Alignment:
Q  64 acatgaaagagagagggtggaagatagtgtaaaaaa-taatttagtg-ttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatc 161  Q
    ||||||||||||||| ||| |||||||| ||||||| |||| ||||| |||||||||||||||| |||| | |||||||||| |||||||||| ||||||    
T  669002 acatgaaagagagagtgtgaaagatagtataaaaaaataatctagtggttgagagagtatgataggaatatgttcctcatttgatctaatggatatgatc 669101  T
Q  162 aactttcccatggtggaaaagaactctcctttcccaaattaaatggcacc 211  Q
    |||||||| ||||||| ||| ||||||| |||||||||||||||||||||    
T  669102 aactttcctatggtgggaaaaaactctcatttcccaaattaaatggcacc 669151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 64 - 207
Target Start/End: Complemental strand, 7677566 - 7677421
Alignment:
Q  64 acatgaaagagagagggtggaagatagtgtaaaaaa-taatttagtg-ttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatc 161  Q
    ||||||||||||||| ||  |||||||| ||||||| |||||||||| ||||||||||||||||  ||| | ||||||||||||||||||||||||||||    
T  7677566 acatgaaagagagagtgtaaaagatagtataaaaaaataatttagtggttgagagagtatgatagaaatatgttcctcatttaatctaatggacatgatc 7677467  T
Q  162 aactttcccatggtggaaaagaactctcctttcccaaattaaatgg 207  Q
    ||||||  |||||||| |||||| ||||||||||||||||||||||    
T  7677466 aactttttcatggtgggaaagaattctcctttcccaaattaaatgg 7677421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 130 - 211
Target Start/End: Original strand, 37468972 - 37469053
Alignment:
Q  130 tgtattcctcatttaatctaatggacatgatcaactttcccatggtggaaaagaactctcctttcccaaattaaatggcacc 211  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  37468972 tgtattcctcatttaatctaatggacatgatcaactttcccatggtgggaaagaactctcctttcccaaattaaatggcacc 37469053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 94 - 211
Target Start/End: Original strand, 17145802 - 17145920
Alignment:
Q  94 aaaaaataatttagtg-ttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatcaactttcccatggtggaaaagaactctcctt 192  Q
    |||||||||| ||||| |||||||||||||||| |||| | ||  ||||||||||||||||||||||||||||||||||| ||  |||||||||||||||    
T  17145802 aaaaaataatctagtggttgagagagtatgataggaatatgttattcatttaatctaatggacatgatcaactttcccatagtaaaaaagaactctcctt 17145901  T
Q  193 tcccaaattaaatggcacc 211  Q
    |||||||||||||||||||    
T  17145902 tcccaaattaaatggcacc 17145920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 64 - 187
Target Start/End: Complemental strand, 32859380 - 32859257
Alignment:
Q  64 acatgaaagagagagggtggaagatagtgtaaaaaataatttagtgttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatcaa 163  Q
    ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||  |||||||||| |||| |||||||||||||| | |  |||||    
T  32859380 acatgaaagtgagagggtggaagatagtgtaaaaaataatttaatgttgagagagtagtataagaatgtgttccacatttaatctaatgcatactatcaa 32859281  T
Q  164 ctttcccatggtggaaaagaactc 187  Q
    ||||||| || || |||| |||||    
T  32859280 ctttcccgtgatgaaaaaaaactc 32859257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 154 - 212
Target Start/End: Complemental strand, 37468967 - 37468909
Alignment:
Q  154 acatgatcaactttcccatggtggaaaagaactctcctttcccaaattaaatggcacct 212  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  37468967 acatgatcaactttcccatggtgggaaagaactctcctttcccaaattaaatggcacct 37468909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 100 - 211
Target Start/End: Original strand, 24322288 - 24322399
Alignment:
Q  100 taatttagtgttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatcaactttcccatggtggaaaagaactctcctttcccaaa 199  Q
    |||| ||||| |||||||||||||||| ||||| |||||||||| |||||| || ||  |  | |||||||||||||| | | ||||  |||||||||||    
T  24322288 taatctagtgatgagagagtatgataaaaatgtgttcctcatttgatctaacggtcaaaaaaacctttcccatggtgggataaaactaacctttcccaaa 24322387  T
Q  200 ttaaatggcacc 211  Q
    ||||||||||||    
T  24322388 ttaaatggcacc 24322399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 94 - 197
Target Start/End: Complemental strand, 40257697 - 40257594
Alignment:
Q  94 aaaaaataatttagtgttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatcaactttcccatggtggaaaagaactctccttt 193  Q
    ||||||||||  |||||||| |||  ||||||||||||| || ||||||| ||||||||||||  |  |||||| ||||||| ||||| ||||||| |||    
T  40257697 aaaaaataatcaagtgttgatagatcatgataagaatgtgtttctcatttgatctaatggacaaaaataacttttccatggtcgaaaacaactctcattt 40257598  T
Q  194 ccca 197  Q
    ||||    
T  40257597 ccca 40257594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 94 - 197
Target Start/End: Complemental strand, 42607198 - 42607095
Alignment:
Q  94 aaaaaataatttagtgttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatcaactttcccatggtggaaaagaactctccttt 193  Q
    ||||||||||  |||||||| |||  ||||||||| ||| || ||||||| ||||||||||||  | ||||||||||||||||| ||| || || |||||    
T  42607198 aaaaaataatcaagtgttgatagatcatgataagattgtgtttctcatttgatctaatggacaaaaacaactttcccatggtgggaaacaattccccttt 42607099  T
Q  194 ccca 197  Q
    ||||    
T  42607098 ccca 42607095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 113 - 214
Target Start/End: Original strand, 44909309 - 44909410
Alignment:
Q  113 agagagtatgataagaatgtattcctcatttaatctaatggacatgatcaactttcccatggtggaaaagaactctcctttcccaaattaaatggcacct 212  Q
    |||||||||||| | |||||||||||||||| ||| || || ||  |  | |||||||||||||| ||| ||||  |||||||||||||||| |||||||    
T  44909309 agagagtatgattaaaatgtattcctcatttgatccaacggccaaaaaaacctttcccatggtgggaaaaaacttacctttcccaaattaaacggcacct 44909408  T
Q  213 ca 214  Q
    ||    
T  44909409 ca 44909410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 197
Target Start/End: Complemental strand, 6729515 - 6729412
Alignment:
Q  94 aaaaaataatttagtgttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatcaactttcccatggtggaaaagaactctccttt 193  Q
    ||||||||||| |||||||| | |  ||||||||| ||| || ||||||| ||| || ||||| ||  ||||||||||| |||||||| || ||||||||    
T  6729515 aaaaaataattaagtgttgataaaccatgataagattgtgtttctcatttgatccaagggacaagaaaaactttcccatagtggaaaacaattctccttt 6729416  T
Q  194 ccca 197  Q
    ||||    
T  6729415 ccca 6729412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 163 - 206
Target Start/End: Complemental strand, 42455083 - 42455040
Alignment:
Q  163 actttcccatggtggaaaagaactctcctttcccaaattaaatg 206  Q
    ||||||||||||| |||||||| |||||||||||||||||||||    
T  42455083 actttcccatggtagaaaagaagtctcctttcccaaattaaatg 42455040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 81 - 151
Target Start/End: Complemental strand, 27855695 - 27855625
Alignment:
Q  81 tggaagatagtgtaaaaaataatttagtgttgagagagtatgataagaatgtattcctcatttaatctaat 151  Q
    ||||||||||||| || || ||| |||||||||||||| ||||||||||| | ||| ||| ||||||||||    
T  27855695 tggaagatagtgtgaagaaaaatctagtgttgagagagcatgataagaatatgttcttcacttaatctaat 27855625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 72 - 126
Target Start/End: Original strand, 41195275 - 41195329
Alignment:
Q  72 gagagagggtggaagatagtgtaaaaaataatttagtgttgagagagtatgataa 126  Q
    |||||||| || |||||||| ||||||||||| |||||| |||||||||||||||    
T  41195275 gagagaggatgaaagatagtataaaaaataatctagtgtggagagagtatgataa 41195329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 113 - 211
Target Start/End: Complemental strand, 41533994 - 41533896
Alignment:
Q  113 agagagtatgataagaatgtattcctcatttaatctaatggacatgatcaactttcccatggtggaaaagaactctcctttcccaaattaaatggcacc 211  Q
    |||||||||||| | ||||| |||||||||| ||| || || ||  |  | |||||||||||||||||| ||||  |||||||||||||||| ||||||    
T  41533994 agagagtatgattaaaatgtgttcctcatttgatccaacggccaaaaaaacctttcccatggtggaaaaaaacttacctttcccaaattaaacggcacc 41533896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 66 - 172
Target Start/End: Original strand, 33323807 - 33323915
Alignment:
Q  66 atgaaagagagagggtggaagatagtgtaaaa--aataatttagtgttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatcaa 163  Q
    |||||||||||||  || ||||||||||||||  |||||| |||||||| |||||    |||||||| | |||||||||||||||||  ||||| |||||    
T  33323807 atgaaagagagagaatgaaagatagtgtaaaataaataatatagtgttgtgagagcggaataagaatatgttcctcatttaatctaacagacataatcaa 33323906  T
Q  164 ctttcccat 172  Q
     ||| ||||    
T  33323907 tttttccat 33323915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 120 - 197
Target Start/End: Original strand, 40257759 - 40257836
Alignment:
Q  120 atgataagaatgtattcctcatttaatctaatggacatgatcaactttcccatggtggaaaagaactctcctttccca 197  Q
    ||||||||||||| || ||||||| ||||||||||||  | |||||||| |||||||| ||| ||||| | |||||||    
T  40257759 atgataagaatgtgtttctcatttgatctaatggacaaaaacaactttctcatggtgggaaacaactcccatttccca 40257836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 211
Target Start/End: Complemental strand, 27599303 - 27599211
Alignment:
Q  119 tatgataagaatgtattcctcatttaatctaatggacatgatcaactttcccatggtggaaaagaactctcctttcccaaattaaatggcacc 211  Q
    |||||||||||||| ||| | | |||||||||||| ||   | |||||||||||||||| ||| ||||| |||||||||  ||||||| ||||    
T  27599303 tatgataagaatgtgttcattacttaatctaatggtcaaatttaactttcccatggtgggaaacaactcccctttcccattttaaatgccacc 27599211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 211
Target Start/End: Original strand, 27600039 - 27600143
Alignment:
Q  107 gtgttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatcaactttcccatggtggaaaagaactctcctttcccaaattaaatg 206  Q
    ||||||||||  |||||||||||||| ||| | | |||||||| ||| ||   | |||||||||||||||| ||| ||||| |||||||||  |||||||    
T  27600039 gtgttgagagtctatgataagaatgtgttcattacttaatctagtggtcaaatttaactttcccatggtgggaaacaactcccctttcccattttaaatg 27600138  T
Q  207 gcacc 211  Q
     ||||    
T  27600139 ccacc 27600143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 179 - 210
Target Start/End: Original strand, 668422 - 668453
Alignment:
Q  179 aaagaactctcctttcccaaattaaatggcac 210  Q
    ||||||||||||||||||||||||||||||||    
T  668422 aaagaactctcctttcccaaattaaatggcac 668453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 162 - 213
Target Start/End: Complemental strand, 29314630 - 29314579
Alignment:
Q  162 aactttcccatggtggaaaagaactctcctttcccaaattaaatggcacctc 213  Q
    |||||||||||||||||||| |||   |||||| ||||||||||||||||||    
T  29314630 aactttcccatggtggaaaaaaacaagcctttctcaaattaaatggcacctc 29314579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 101 - 212
Target Start/End: Original strand, 29315249 - 29315360
Alignment:
Q  101 aatttagtgttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatcaactttcccatggtggaaaagaactctcctttcccaaat 200  Q
    |||| ||||||||| ||||||||||||| ||||||| |||||  |||||||||  |  |   ||||||||||| ||| ||| ||||   |||||||||||    
T  29315249 aattgagtgttgagggagtatgataagagtgtattcttcattagatctaatggttaaaacttactttcccatgatgggaaaaaactagtctttcccaaat 29315348  T
Q  201 taaatggcacct 212  Q
    ||||| ||||||    
T  29315349 taaattgcacct 29315360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 151
Target Start/End: Original strand, 4895038 - 4895108
Alignment:
Q  81 tggaagatagtgtaaaaaataatttagtgttgagagagtatgataagaatgtattcctcatttaatctaat 151  Q
    ||||||||||||| || || ||| |||||||||||||| ||| ||||||| | ||| ||| ||||||||||    
T  4895038 tggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaat 4895108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 151
Target Start/End: Original strand, 24043999 - 24044069
Alignment:
Q  81 tggaagatagtgtaaaaaataatttagtgttgagagagtatgataagaatgtattcctcatttaatctaat 151  Q
    ||||||||||||| || || ||| |||||||||||||| ||| ||||||| | ||| ||| ||||||||||    
T  24043999 tggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaat 24044069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 212
Target Start/End: Complemental strand, 29006396 - 29006346
Alignment:
Q  162 aactttcccatggtggaaaagaactctcctttcccaaattaaatggcacct 212  Q
    |||||||||||||||| ||| |||   ||||||||||||||||||||||||    
T  29006396 aactttcccatggtgggaaaaaacaagcctttcccaaattaaatggcacct 29006346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 151
Target Start/End: Original strand, 32499829 - 32499898
Alignment:
Q  81 tggaagatagtgtaaaaaataatttagtgttgagagagtatgataagaatgtattcctcatttaatctaat 151  Q
    ||||||||||||| ||||| ||| |||||||||||||| ||| ||||||| | ||| ||| ||||||||||    
T  32499829 tggaagatagtgtgaaaaa-aatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaat 32499898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 151
Target Start/End: Complemental strand, 36682965 - 36682895
Alignment:
Q  81 tggaagatagtgtaaaaaataatttagtgttgagagagtatgataagaatgtattcctcatttaatctaat 151  Q
    ||||||||||||| || || ||| |||||||||||||| ||| ||||||| | ||| ||| ||||||||||    
T  36682965 tggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaat 36682895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 151
Target Start/End: Original strand, 46815018 - 46815088
Alignment:
Q  81 tggaagatagtgtaaaaaataatttagtgttgagagagtatgataagaatgtattcctcatttaatctaat 151  Q
    ||||||||||||| || || ||| || ||||||||||| ||| ||||||| | ||| ||||||||||||||    
T  46815018 tggaagatagtgttaagaaaaatctaatgttgagagagcatgttaagaatatgttcttcatttaatctaat 46815088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 151
Target Start/End: Complemental strand, 47814101 - 47814031
Alignment:
Q  81 tggaagatagtgtaaaaaataatttagtgttgagagagtatgataagaatgtattcctcatttaatctaat 151  Q
    ||||||||||||| || || ||| |||||||||||||| ||| ||||||| | ||| ||| ||||||||||    
T  47814101 tggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaat 47814031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 163 - 204
Target Start/End: Complemental strand, 20890247 - 20890206
Alignment:
Q  163 actttcccatggtggaaaagaactctcctttcccaaattaaa 204  Q
    ||||||||||||||| ||| |||| |||||||||||||||||    
T  20890247 actttcccatggtgggaaaaaactgtcctttcccaaattaaa 20890206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 212
Target Start/End: Complemental strand, 37864124 - 37864091
Alignment:
Q  179 aaagaactctcctttcccaaattaaatggcacct 212  Q
    |||||||| |||||||||||||||||||||||||    
T  37864124 aaagaactttcctttcccaaattaaatggcacct 37864091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 153
Target Start/End: Complemental strand, 8464501 - 8464445
Alignment:
Q  97 aaataatttagtgttgagagagtatgataagaatgtattcctcatttaatctaatgg 153  Q
    ||||||| |||||||| ||| ||||||||||| |||| || ||| ||||||||||||    
T  8464501 aaataatatagtgttgggagtgtatgataagattgtactcttcaattaatctaatgg 8464445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 212
Target Start/End: Original strand, 45887981 - 45888029
Alignment:
Q  164 ctttcccatggtggaaaagaactctcctttcccaaattaaatggcacct 212  Q
    |||||||||||||| ||| ||||  |||||||||||||||||| |||||    
T  45887981 ctttcccatggtgggaaaaaactagcctttcccaaattaaatgccacct 45888029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 212
Target Start/End: Original strand, 47331954 - 47332002
Alignment:
Q  164 ctttcccatggtggaaaagaactctcctttcccaaattaaatggcacct 212  Q
    |||||||||||||| ||| ||||  |||||||||||||||||| |||||    
T  47331954 ctttcccatggtgggaaaaaactagcctttcccaaattaaatgtcacct 47332002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 183; Significance: 4e-99; HSPs: 65)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 36750256 - 36750050
Alignment:
Q  1 tggttgctgccggaaaacttgttaacgtaccattttcaaggatcaaacaaatttagtgtgagaacatgaaagagagagggtggaagatagtgtaaaaaat 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36750256 tggttgctgccggaaaacttgttagcgtaccattttcaaggatcaaacaaatttagtgtgagaacatgaaagagagagggtggaagatagtgtaaaaaat 36750157  T
Q  101 aatttagt-gttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatcaactttcccatggtggaaaagaactctcctttcccaaa 199  Q
    ||| |||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||    
T  36750156 aatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaacttttccatggtggaaaagaactctcctttcccaaa 36750057  T
Q  200 ttaaatg 206  Q
    |||||||    
T  36750056 ttaaatg 36750050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 52492116 - 52492329
Alignment:
Q  1 tggttgctgccggaaaacttgttaacgtaccattttcaaggatcaaacaaatttagtgtgagaacatgaaagagagagggtggaagatagtgtaaaaaat 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52492116 tggttgctgccggaaaacttgttagcgtaccattttcaaggatcaaacaaatttagtgtgagaacatgaaagagagagggtggaagatagtgtaaaaaat 52492215  T
Q  101 aatttagt-gttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatcaactttcccatggtggaaaagaactctcctttcccaaa 199  Q
    ||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| |||||||||    
T  52492216 aatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatggacatgaacaacttttccatggtggaaaagaactctcatttcccaaa 52492315  T
Q  200 ttaaatggcacctc 213  Q
    ||||||| ||||||    
T  52492316 ttaaatgacacctc 52492329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 64 - 212
Target Start/End: Original strand, 36750337 - 36750486
Alignment:
Q  64 acatgaaagagagagggtggaagatagtgtaaaaaataatttagtg-ttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatca 162  Q
    ||||||||||||||| ||| |||||||| ||||||||||| ||||| ||||||||||||||||  ||| | ||||||||||||||||||| |||||||||    
T  36750337 acatgaaagagagagtgtgaaagatagtataaaaaataatctagtggttgagagagtatgatagaaatatgttcctcatttaatctaatgaacatgatca 36750436  T
Q  163 actttcccatggtggaaaagaactctcctttcccaaattaaatggcacct 212  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  36750437 actttcccatggtgggaaagaactctcctttcccaaattaaatggcacct 36750486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 64 - 210
Target Start/End: Complemental strand, 45242215 - 45242067
Alignment:
Q  64 acatgaaagagagagggtggaagatagtgtaaaaaa-taatttagtg-ttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatc 161  Q
    ||||||||||||||| ||| |||||||| ||||||| |||| ||||| |||||||||||||||| |||| | ||||||||||||||||||||||||||||    
T  45242215 acatgaaagagagagtgtgaaagatagtataaaaaaataatctagtggttgagagagtatgataggaatatgttcctcatttaatctaatggacatgatc 45242116  T
Q  162 aactttcccatggtggaaaagaactctcctttcccaaattaaatggcac 210  Q
    |||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  45242115 aactttcccatgatggaaaagaactctcatttcccaaattaaatggcac 45242067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 64 - 215
Target Start/End: Original strand, 32490094 - 32490247
Alignment:
Q  64 acatgaaagagagagggtggaagatagtgtaaaaaa-taatttagtg-ttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatc 161  Q
    ||||||||||| ||| ||| |||||||| ||||||| |||| ||||| |||||||||||||||| |||| | ||||||||||||||||||||||||||||    
T  32490094 acatgaaagagggagtgtgaaagatagtataaaaaaataatctagtggttgagagagtatgataggaatatgttcctcatttaatctaatggacatgatc 32490193  T
Q  162 aactttcccatggtggaaaagaactctcctttcccaaattaaatggcacctcaa 215  Q
    |||||| ||||||||| ||||||||||||||||||||||||||||| |||||||    
T  32490194 aacttttccatggtgggaaagaactctcctttcccaaattaaatggtacctcaa 32490247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 64 - 211
Target Start/End: Original strand, 19132711 - 19132860
Alignment:
Q  64 acatgaaagagagagggtggaagatagtgtaaaaaa-taatttagtg-ttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatc 161  Q
    ||||||||||||||  ||| |||||| | ||||||| ||||  |||| ||||||||||||||||||||| | ||||||||||||||||||||||||||||    
T  19132711 acatgaaagagagaatgtgaaagataatataaaaaaataatccagtggttgagagagtatgataagaatatgttcctcatttaatctaatggacatgatc 19132810  T
Q  162 aactttcccatggtggaaaagaactctcctttcccaaattaaatggcacc 211  Q
    |||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  19132811 aactttcccatggtgggaaagaactttcctttcccaaattaaatggcacc 19132860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 64 - 211
Target Start/End: Original strand, 45242886 - 45243035
Alignment:
Q  64 acatgaaagagagagggtggaagatagtgtaaaaaa-taatttagtg-ttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatc 161  Q
    ||||||||||||||| ||| |||||| | ||||||| |||| ||||| |||||||||||||||| |||| | |||||||||||||||||| || ||||||    
T  45242886 acatgaaagagagagtgtgaaagataatataaaaaaataatctagtggttgagagagtatgataggaatatgttcctcatttaatctaatagatatgatc 45242985  T
Q  162 aactttcccatggtggaaaagaactctcctttcccaaattaaatggcacc 211  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  45242986 aactttcccatggtggaaaagaactcttctttcccaaattaaatggcacc 45243035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 56 - 210
Target Start/End: Complemental strand, 38922900 - 38922744
Alignment:
Q  56 gtgtgagaacatgaaagagagagggtggaagatagtgtaaaaaa-taatttagtg-ttgagagagtatgataagaatgtattcctcatttaatctaatgg 153  Q
    ||||||| ||||||||||||||| ||| |||||||| ||||||| |||| ||||| |||||||||||||||| |||| | || |||||||||||||||||    
T  38922900 gtgtgaggacatgaaagagagagtgtgaaagatagtataaaaaaataatctagtggttgagagagtatgataggaatatgtttctcatttaatctaatgg 38922801  T
Q  154 acatgatcaactttcccatggtggaaaagaactctcctttcccaaattaaatggcac 210  Q
    | |||||||||||||||||||| | ||| ||||||||||||||||||||||||||||    
T  38922800 atatgatcaactttcccatggtaggaaataactctcctttcccaaattaaatggcac 38922744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 64 - 212
Target Start/End: Original strand, 44687062 - 44687212
Alignment:
Q  64 acatgaaagagagagggtggaagatagtgtaaaaaa-taatttagtg-ttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatc 161  Q
    ||||||||||||||| ||| |||||||| ||||||| |||| || || |||||||||||||||| |||| | ||||||||||||||||||| | ||||||    
T  44687062 acatgaaagagagagtgtgaaagatagtataaaaaaataatctaatggttgagagagtatgataggaatattttcctcatttaatctaatgaatatgatc 44687161  T
Q  162 aactttcccatggtggaaaagaactctcctttcccaaattaaatggcacct 212  Q
    |||||| |||||||||||||||| |||||||||||||||||||||||||||    
T  44687162 aacttttccatggtggaaaagaattctcctttcccaaattaaatggcacct 44687212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 64 - 209
Target Start/End: Complemental strand, 3971141 - 3970994
Alignment:
Q  64 acatgaaagagagagggtggaagatagtgtaaaaaa-taatttagtg-ttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatc 161  Q
    ||||||||||||||| ||| |||||||| ||||||| ||||  |||| |||||||||||||||| |||| | ||||||||||||||||||||||||||||    
T  3971141 acatgaaagagagagtgtgaaagatagtataaaaaaataatcaagtggttgagagagtatgataggaatatgttcctcatttaatctaatggacatgatc 3971042  T
Q  162 aactttcccatggtggaaaagaactctcctttcccaaattaaatggca 209  Q
    |||||| |||||||| |||| ||||||| |||||||||||||||||||    
T  3971041 aacttttccatggtgaaaaaaaactctcatttcccaaattaaatggca 3970994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 94 - 211
Target Start/End: Complemental strand, 19132681 - 19132563
Alignment:
Q  94 aaaaaataatttagtg-ttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatcaactttcccatggtggaaaagaactctcctt 192  Q
    |||||||||| ||||| |||||||||||||||| |||| | ||||||||||||||||||||||||||||||||||||||| || | ||||||||||||||    
T  19132681 aaaaaataatctagtggttgagagagtatgataggaatatgttcctcatttaatctaatggacatgatcaactttcccatagtaggaaagaactctcctt 19132582  T
Q  193 tcccaaattaaatggcacc 211  Q
    |||||||||||||||||||    
T  19132581 tcccaaattaaatggcacc 19132563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 94 - 211
Target Start/End: Complemental strand, 32490064 - 32489946
Alignment:
Q  94 aaaaaataatttagtg-ttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatcaactttcccatggtggaaaagaactctcctt 192  Q
    ||||||||||| |||| ||||||||||||||||  ||| | ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  32490064 aaaaaataattcagtggttgagagagtatgatagaaatatgttccttatttaatctaatggacatgatcaactttcccatggtggaaaagaattctcctt 32489965  T
Q  193 tcccaaattaaatggcacc 211  Q
    |||||||||||||||||||    
T  32489964 tcccaaattaaatggcacc 32489946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 64 - 212
Target Start/End: Complemental strand, 44686403 - 44686254
Alignment:
Q  64 acatgaaagagagagggtggaagatagtgtaaaaaa-taatttagtg-ttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatc 161  Q
    ||||||||||||||| ||| |||||||| ||||||| |||| ||||| |||||||||||||||| |||| | || |||||||||||||||||||||||||    
T  44686403 acatgaaagagagagtgtgaaagatagtataaaaaaataatctagtggttgagagagtatgataggaatatgtttctcatttaatctaatggacatgatc 44686304  T
Q  162 aactttcccatggtggaaaagaactctcctttcccaaattaaatggcacct 212  Q
    ||||||| |||||| ||||| ||||||||||| ||||||||||||||||||    
T  44686303 aactttctcatggt-gaaaaaaactctccttttccaaattaaatggcacct 44686254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 64 - 211
Target Start/End: Original strand, 38923564 - 38923713
Alignment:
Q  64 acatgaaagagagagggtggaagatagtgtaaaaaa-taatttagtg-ttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatc 161  Q
    ||||||||||||||| ||| |||||||| ||||||| |||| ||||| ||||||||||||||||  ||| | ||||||||||||||||||| |||| |||    
T  38923564 acatgaaagagagagtgtgaaagatagtataaaaaaataatctagtggttgagagagtatgatagaaatatgttcctcatttaatctaatgaacattatc 38923663  T
Q  162 aactttcccatggtggaaaagaactctcctttcccaaattaaatggcacc 211  Q
    |||||| ||||||||| ||||||||||| |||||||||||||||||||||    
T  38923664 aacttttccatggtgggaaagaactctcatttcccaaattaaatggcacc 38923713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 64 - 209
Target Start/End: Original strand, 3998740 - 3998887
Alignment:
Q  64 acatgaaagagagagggtggaagatagtgtaaaaaa-taatttagtg-ttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatc 161  Q
    ||||||||||||||| ||  |||||||| ||||||| ||||  |||| |||||||||||||||| |||| | ||||||||||||||||||||||||||||    
T  3998740 acatgaaagagagagtgtaaaagatagtataaaaaaataatcaagtggttgagagagtatgataggaatatgttcctcatttaatctaatggacatgatc 3998839  T
Q  162 aactttcccatggtggaaaagaactctcctttcccaaattaaatggca 209  Q
    |||||| |||||||| |||| ||||||| |||||||||||||||||||    
T  3998840 aacttttccatggtgaaaaaaaactctcatttcccaaattaaatggca 3998887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 64 - 212
Target Start/End: Complemental strand, 41755648 - 41755498
Alignment:
Q  64 acatgaaagagagagggtggaagatagtgtaaaaaa-taatttagtg-ttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatc 161  Q
    ||||||||||||||| ||| |||||||| ||||||| |||| ||||| ||||||||||||||||  ||| | ||||||||||||||||||| ||||||||    
T  41755648 acatgaaagagagagtgtgaaagatagtataaaaaaataatatagtggttgagagagtatgatagaaatatgttcctcatttaatctaatgaacatgatc 41755549  T
Q  162 aactttcccatggtggaaaagaactctcctttcccaaattaaatggcacct 212  Q
    || |||| |||||||| ||| |||||||||||||||||||||||| |||||    
T  41755548 aattttctcatggtgggaaaaaactctcctttcccaaattaaatgacacct 41755498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 64 - 212
Target Start/End: Original strand, 41756331 - 41756481
Alignment:
Q  64 acatgaaagagagagggtggaagatagtgtaaaaaa-taatttagtg-ttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatc 161  Q
    ||||||||||||||| ||| |||||||| ||||||| |||| || || |||||||||||||||| |||| | ||||||||||||||||||| ||||||||    
T  41756331 acatgaaagagagagtgtgaaagatagtataaaaaaataatctaatggttgagagagtatgataggaatatgttcctcatttaatctaatgaacatgatc 41756430  T
Q  162 aactttcccatggtggaaaagaactctcctttcccaaattaaatggcacct 212  Q
    |||||||||||| ||| ||||||||||||||||| || ||||||| |||||    
T  41756431 aactttcccatgatgggaaagaactctcctttcctaacttaaatgacacct 41756481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 64 - 180
Target Start/End: Complemental strand, 45500620 - 45500504
Alignment:
Q  64 acatgaaagagagagggtggaagatagtgtaaaaaataatttagtgttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatcaa 163  Q
    |||||||||||||||||||||||||||   ||| |||||| ||||||||||||||||  |||||||||| |||||||||||||||||||||||| |||||    
T  45500620 acatgaaagagagagggtggaagatagataaaacaataatctagtgttgagagagtagaataagaatgtgttcctcatttaatctaatggacataatcaa 45500521  T
Q  164 ctttcccatggtggaaa 180  Q
    ||||||||| |||||||    
T  45500520 ctttcccattgtggaaa 45500504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 64 - 212
Target Start/End: Original strand, 3971801 - 3971951
Alignment:
Q  64 acatgaaagagagagggtggaagatagtgtaaaaaa-taatttagtg-ttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatc 161  Q
    ||||||||||||||| ||| |||||||| ||||||| |||| ||||| ||||||||||||||||  ||| | ||||||||||||||||||||| ||||||    
T  3971801 acatgaaagagagagtgtgaaagatagtataaaaaaataatctagtggttgagagagtatgatagaaatatgttcctcatttaatctaatggatatgatc 3971900  T
Q  162 aactttcccatggtggaaaagaactctcctttcccaaattaaatggcacct 212  Q
    |||||||||||  ||| |||||||| || ||||| ||||||||||||||||    
T  3971901 aactttcccatcatgggaaagaactttcatttcctaaattaaatggcacct 3971951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 64 - 212
Target Start/End: Complemental strand, 3998077 - 3997927
Alignment:
Q  64 acatgaaagagagagggtggaagatagtgtaaaaaa-taatttagtg-ttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatc 161  Q
    ||||||||||||||| ||| |||||||| ||||||| |||| ||||| ||||||||||||||||  ||| | ||||||||||||||||||||| ||||||    
T  3998077 acatgaaagagagagtgtgaaagatagtataaaaaaataatctagtggttgagagagtatgatagaaatatgttcctcatttaatctaatggatatgatc 3997978  T
Q  162 aactttcccatggtggaaaagaactctcctttcccaaattaaatggcacct 212  Q
    |||||||||||  ||| |||||||| || ||||| ||||||||||||||||    
T  3997977 aactttcccatcatgggaaagaactttcatttcctaaattaaatggcacct 3997927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 64 - 211
Target Start/End: Complemental strand, 52492035 - 52491891
Alignment:
Q  64 acatgaaagagagagggtggaagatagtgtaaaaaa-taatttagtg-ttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatc 161  Q
    ||||||||||||||| ||| |||||||| ||||||| |||| ||||| ||||||||||||||||  ||| | ||||| ||||||||||||||||||||||    
T  52492035 acatgaaagagagagtgtgaaagatagtataaaaaaataatctagtggttgagagagtatgatagaaatatgttccttatttaatctaatggacatgatc 52491936  T
Q  162 aactttcccatggtggaaaagaactctcctttcccaaattaaatggcacc 211  Q
    |||||| |||     | |||||||||||||||||||||||||||||||||    
T  52491935 aacttttcca-----ggaaagaactctcctttcccaaattaaatggcacc 52491891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 73 - 181
Target Start/End: Original strand, 8436574 - 8436682
Alignment:
Q  73 agagagggtggaagatagtgtaaaaaataatttagtgttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatcaactttcccat 172  Q
    |||||| |||||||||||||||||||||||| || |||||||| ||||  |||| ||||| |||| ||||||||| |||| |||| |||||||||  |||    
T  8436574 agagagagtggaagatagtgtaaaaaataatctaatgttgagaaagtagtataaaaatgtgttccacatttaatcaaatgcacattatcaactttttcat 8436673  T
Q  173 ggtggaaaa 181  Q
    |||||||||    
T  8436674 ggtggaaaa 8436682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 73 - 187
Target Start/End: Original strand, 8440119 - 8440233
Alignment:
Q  73 agagagggtggaagatagtgtaaaaaataatttagtgttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatcaactttcccat 172  Q
    |||||| ||| |||||||||||||||||||| || |||||||||||||  |||| ||||| |||| ||||||||| |||| |||| |||||||||  |||    
T  8440119 agagagagtgaaagatagtgtaaaaaataatctaatgttgagagagtagtataataatgtgttccacatttaatcaaatgcacattatcaactttttcat 8440218  T
Q  173 ggtggaaaagaactc 187  Q
    |||| |||| |||||    
T  8440219 ggtgaaaaaaaactc 8440233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 64 - 153
Target Start/End: Original strand, 8653622 - 8653710
Alignment:
Q  64 acatgaaagagagagggtggaagatagtgtaaaaaataatttagtgttgagagagtatgataagaatgtattcctcatttaatctaatgg 153  Q
    ||||||||||||||||| ||||||||||||| ||||| || |||||||||| || |||||||||| ||| || ||||||| ||| |||||    
T  8653622 acatgaaagagagaggg-ggaagatagtgtagaaaatgatctagtgttgagggaatatgataagagtgtgtttctcatttgatcaaatgg 8653710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 164 - 211
Target Start/End: Original strand, 31556217 - 31556264
Alignment:
Q  164 ctttcccatggtggaaaagaactctcctttcccaaattaaatggcacc 211  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||||    
T  31556217 ctttcccatgatgggaaagaactctcctttcccaaattaaatggcacc 31556264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 81 - 151
Target Start/End: Complemental strand, 8427346 - 8427276
Alignment:
Q  81 tggaagatagtgtaaaaaataatttagtgttgagagagtatgataagaatgtattcctcatttaatctaat 151  Q
    ||||||||||||| || || ||| |||||||||||||| ||||||||||| | ||| ||||||||||||||    
T  8427346 tggaagatagtgtgaagaaaaatctagtgttgagagagcatgataagaatatgttcttcatttaatctaat 8427276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 64 - 153
Target Start/End: Original strand, 11267588 - 11267676
Alignment:
Q  64 acatgaaagagagagggtggaagatagtgtaaaaaataatttagtgttgagagagtatgataagaatgtattcctcatttaatctaatgg 153  Q
    ||||| ||||||||||| |||||||||||||||||||||| ||||| |||  ||||||||||||| | |  || | ||||||||||||||    
T  11267588 acatggaagagagaggg-ggaagatagtgtaaaaaataatatagtggtgatggagtatgataagagtatgctctttatttaatctaatgg 11267676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 162 - 210
Target Start/End: Original strand, 42145277 - 42145325
Alignment:
Q  162 aactttcccatggtggaaaagaactctcctttcccaaattaaatggcac 210  Q
    |||||||| ||||||||||| || |||||||||||||||||||||||||    
T  42145277 aactttcctatggtggaaaaaaagtctcctttcccaaattaaatggcac 42145325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 165 - 211
Target Start/End: Complemental strand, 17227014 - 17226968
Alignment:
Q  165 tttcccatggtggaaaagaactctcctttcccaaattaaatggcacc 211  Q
    ||||||||||||| |||||| ||||||||||||||||||||| ||||    
T  17227014 tttcccatggtgggaaagaaatctcctttcccaaattaaatgccacc 17226968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 81 - 151
Target Start/End: Complemental strand, 25025304 - 25025234
Alignment:
Q  81 tggaagatagtgtaaaaaataatttagtgttgagagagtatgataagaatgtattcctcatttaatctaat 151  Q
    ||||||||||||| ||||| ||| |||||||||||||| ||| ||||||| | ||| ||| ||||||||||    
T  25025304 tggaagatagtgtgaaaaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaat 25025234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 81 - 151
Target Start/End: Original strand, 31014880 - 31014950
Alignment:
Q  81 tggaagatagtgtaaaaaataatttagtgttgagagagtatgataagaatgtattcctcatttaatctaat 151  Q
    ||||||||||||| || || |||||||||||||||||| ||| ||||||| | ||| ||| ||||||||||    
T  31014880 tggaagatagtgtgaagaaaaatttagtgttgagagagcatggtaagaatatgttcttcacttaatctaat 31014950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 81 - 151
Target Start/End: Original strand, 47737629 - 47737699
Alignment:
Q  81 tggaagatagtgtaaaaaataatttagtgttgagagagtatgataagaatgtattcctcatttaatctaat 151  Q
    ||||||||||||| || || ||| |||||||||||||| ||||||||||| | ||| ||| ||||||||||    
T  47737629 tggaagatagtgtgaagaaaaatctagtgttgagagagcatgataagaatatgttcttcacttaatctaat 47737699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 211
Target Start/End: Complemental strand, 38923470 - 38923438
Alignment:
Q  179 aaagaactctcctttcccaaattaaatggcacc 211  Q
    |||||||||||||||||||||||||||||||||    
T  38923470 aaagaactctcctttcccaaattaaatggcacc 38923438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 211
Target Start/End: Original strand, 45242309 - 45242341
Alignment:
Q  179 aaagaactctcctttcccaaattaaatggcacc 211  Q
    |||||||||||||||||||||||||||||||||    
T  45242309 aaagaactctcctttcccaaattaaatggcacc 45242341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 211
Target Start/End: Complemental strand, 31556235 - 31556188
Alignment:
Q  164 ctttcccatggtggaaaagaactctcctttcccaaattaaatggcacc 211  Q
    |||||||||  ||| ||||||||||||||| |||||||||||||||||    
T  31556235 ctttcccatcatgggaaagaactctccttttccaaattaaatggcacc 31556188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 162 - 213
Target Start/End: Original strand, 37105076 - 37105127
Alignment:
Q  162 aactttcccatggtggaaaagaactctcctttcccaaattaaatggcacctc 213  Q
    |||||||||||||||| ||| || |||| |||||||||||||| ||||||||    
T  37105076 aactttcccatggtgggaaaaaagtctcgtttcccaaattaaacggcacctc 37105127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 64 - 111
Target Start/End: Original strand, 50305167 - 50305214
Alignment:
Q  64 acatgaaagagagagggtggaagatagtgtaaaaaataatttagtgtt 111  Q
    ||||| ||||||||||||||||||||| ||||| |||||| |||||||    
T  50305167 acatggaagagagagggtggaagatagcgtaaagaataatatagtgtt 50305214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 151
Target Start/End: Complemental strand, 3945025 - 3944955
Alignment:
Q  81 tggaagatagtgtaaaaaataatttagtgttgagagagtatgataagaatgtattcctcatttaatctaat 151  Q
    ||||||||||||| || || ||| |||||||||||||| ||| ||||||| | ||| ||| ||||||||||    
T  3945025 tggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaat 3944955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 151
Target Start/End: Original strand, 8427699 - 8427769
Alignment:
Q  81 tggaagatagtgtaaaaaataatttagtgttgagagagtatgataagaatgtattcctcatttaatctaat 151  Q
    ||||||||||||| || || ||| |||||||||||||| ||| ||||||| | ||| ||| ||||||||||    
T  8427699 tggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaat 8427769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 212
Target Start/End: Complemental strand, 14667345 - 14667296
Alignment:
Q  162 aactttcccatggtggaaaagaactctcctttcccaaattaaatggcacct 212  Q
    |||||||||||||||| ||| || ||||||||||||||||||| |||||||    
T  14667345 aactttcccatggtgggaaaaaa-tctcctttcccaaattaaacggcacct 14667296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 151
Target Start/End: Original strand, 19555879 - 19555949
Alignment:
Q  81 tggaagatagtgtaaaaaataatttagtgttgagagagtatgataagaatgtattcctcatttaatctaat 151  Q
    ||||||||||||| || || ||| |||||||||||||| ||| ||||||| | ||| ||| ||||||||||    
T  19555879 tggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaat 19555949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 151
Target Start/End: Complemental strand, 31014467 - 31014397
Alignment:
Q  81 tggaagatagtgtaaaaaataatttagtgttgagagagtatgataagaatgtattcctcatttaatctaat 151  Q
    ||||||||||||| || || |||||||||||||||||  ||| ||||||| | ||| ||| ||||||||||    
T  31014467 tggaagatagtgtgaagaaaaatttagtgttgagagaacatgttaagaatatgttcttcacttaatctaat 31014397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 200
Target Start/End: Complemental strand, 37104401 - 37104363
Alignment:
Q  162 aactttcccatggtggaaaagaactctcctttcccaaat 200  Q
    |||||||||||||||||||| || |||||||||||||||    
T  37104401 aactttcccatggtggaaaaaaagtctcctttcccaaat 37104363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 151
Target Start/End: Complemental strand, 37374945 - 37374875
Alignment:
Q  81 tggaagatagtgtaaaaaataatttagtgttgagagagtatgataagaatgtattcctcatttaatctaat 151  Q
    ||||||||||||| || || ||| |||||||||||||| ||| ||||||| | ||| ||| ||||||||||    
T  37374945 tggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaat 37374875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 151
Target Start/End: Original strand, 41875572 - 41875642
Alignment:
Q  81 tggaagatagtgtaaaaaataatttagtgttgagagagtatgataagaatgtattcctcatttaatctaat 151  Q
    ||||||||||||| || || ||| |||||||||||||| ||| ||||||| | ||| ||| ||||||||||    
T  41875572 tggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaat 41875642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 211
Target Start/End: Complemental strand, 42144411 - 42144369
Alignment:
Q  169 ccatggtggaaaagaactctcctttcccaaattaaatggcacc 211  Q
    ||||||||||||| |||  ||||||||||||||||||||||||    
T  42144411 ccatggtggaaaataacattcctttcccaaattaaatggcacc 42144369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 151
Target Start/End: Original strand, 42356765 - 42356835
Alignment:
Q  81 tggaagatagtgtaaaaaataatttagtgttgagagagtatgataagaatgtattcctcatttaatctaat 151  Q
    ||||||||||||| || || ||| |||||||||||||| ||| || |||| ||||  ||||||||||||||    
T  42356765 tggaagatagtgtgaagaaaaatctagtgttgagagagaatgctaggaatatattattcatttaatctaat 42356835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 151
Target Start/End: Original strand, 44868574 - 44868644
Alignment:
Q  81 tggaagatagtgtaaaaaataatttagtgttgagagagtatgataagaatgtattcctcatttaatctaat 151  Q
    ||||||||||||| || || ||| |||||||||||||| ||| ||||||| | ||| ||| ||||||||||    
T  44868574 tggaagatagtgttaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaat 44868644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 151
Target Start/End: Original strand, 48219191 - 48219261
Alignment:
Q  81 tggaagatagtgtaaaaaataatttagtgttgagagagtatgataagaatgtattcctcatttaatctaat 151  Q
    ||||||||||||| || || | | |||||||||||||| ||| ||||||| ||||| ||| ||||||||||    
T  48219191 tggaagatagtgtgaagaaaagtctagtgttgagagagcatgttaagaatatattcatcacttaatctaat 48219261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 151
Target Start/End: Complemental strand, 49752403 - 49752333
Alignment:
Q  81 tggaagatagtgtaaaaaataatttagtgttgagagagtatgataagaatgtattcctcatttaatctaat 151  Q
    ||||||||||||| || || ||| |||||||||||||| ||| ||||||| | ||| ||| ||||||||||    
T  49752403 tggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaat 49752333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 151
Target Start/End: Original strand, 49752866 - 49752936
Alignment:
Q  81 tggaagatagtgtaaaaaataatttagtgttgagagagtatgataagaatgtattcctcatttaatctaat 151  Q
    ||||||||||||| || || ||| |||||||||||||| ||| ||| ||| ||||| ||| ||||||||||    
T  49752866 tggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaaaaatatattcttcacttaatctaat 49752936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 212
Target Start/End: Complemental strand, 49756324 - 49756274
Alignment:
Q  162 aactttcccatggtggaaaagaactctcctttcccaaattaaatggcacct 212  Q
    |||||||||||||||| ||| |||  |||||| ||||||||||||||||||    
T  49756324 aactttcccatggtgggaaataacattccttttccaaattaaatggcacct 49756274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 151
Target Start/End: Original strand, 50687664 - 50687734
Alignment:
Q  81 tggaagatagtgtaaaaaataatttagtgttgagagagtatgataagaatgtattcctcatttaatctaat 151  Q
    ||||||||||||| || || ||| |||||||||||||| ||| ||||||| | ||| ||| ||||||||||    
T  50687664 tggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaat 50687734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 151
Target Start/End: Complemental strand, 55281965 - 55281895
Alignment:
Q  81 tggaagatagtgtaaaaaataatttagtgttgagagagtatgataagaatgtattcctcatttaatctaat 151  Q
    ||||||||||||| || || ||| |||||||||||||| ||| ||||||| | ||| ||| ||||||||||    
T  55281965 tggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaat 55281895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 182
Target Start/End: Original strand, 55477956 - 55478042
Alignment:
Q  96 aaaataatttagtgttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatcaactttcccatggtggaaaag 182  Q
    |||| |||||||||| |||||||||| |||| ||||| ||| | |||| |||||| || ||  || |||||||| ||||||||||||    
T  55477956 aaaaaaatttagtgtggagagagtattataaaaatgtgttcttgatttgatctaaaggtcaatataaactttcctatggtggaaaag 55478042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 170 - 211
Target Start/End: Original strand, 17227955 - 17227996
Alignment:
Q  170 catggtggaaaagaactctcctttcccaaattaaatggcacc 211  Q
    |||||||| |||||| ||||||||||||||||||||| ||||    
T  17227955 catggtgggaaagaagtctcctttcccaaattaaatgccacc 17227996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 163 - 216
Target Start/End: Original strand, 25329958 - 25330011
Alignment:
Q  163 actttcccatggtggaaaagaactctcctttcccaaattaaatggcacctcaat 216  Q
    ||||||||||| |||||||||| | | ||||||||||||||||| ||| |||||    
T  25329958 actttcccatgatggaaaagaagtttgctttcccaaattaaatgacacatcaat 25330011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 163 - 212
Target Start/End: Original strand, 43638078 - 43638127
Alignment:
Q  163 actttcccatggtggaaaagaactctcctttcccaaattaaatggcacct 212  Q
    ||||||||||| ||| |||||| | | |||||||||||||||||||||||    
T  43638078 actttcccatgatgggaaagaagtttactttcccaaattaaatggcacct 43638127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 162 - 211
Target Start/End: Original strand, 49757181 - 49757230
Alignment:
Q  162 aactttcccatggtggaaaagaactctcctttcccaaattaaatggcacc 211  Q
    |||||||||||||| | ||| || ||||||||||||||||||| ||||||    
T  49757181 aactttcccatggtaggaaaaaagtctcctttcccaaattaaacggcacc 49757230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 211
Target Start/End: Original strand, 3971235 - 3971267
Alignment:
Q  179 aaagaactctcctttcccaaattaaatggcacc 211  Q
    |||||||||||||||||||||||||||| ||||    
T  3971235 aaagaactctcctttcccaaattaaatgacacc 3971267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 211
Target Start/End: Complemental strand, 3998646 - 3998614
Alignment:
Q  179 aaagaactctcctttcccaaattaaatggcacc 211  Q
    |||||||||||||||||||||||||||| ||||    
T  3998646 aaagaactctcctttcccaaattaaatgacacc 3998614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 153
Target Start/End: Complemental strand, 8652916 - 8652868
Alignment:
Q  105 tagtgttgagagagtatgataagaatgtattcctcatttaatctaatgg 153  Q
    |||||||||||||||| ||| | ||||| |||||||||||||| |||||    
T  8652916 tagtgttgagagagtaggattaaaatgtgttcctcatttaatcaaatgg 8652868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 211
Target Start/End: Complemental strand, 39901894 - 39901846
Alignment:
Q  163 actttcccatggtggaaaagaactctcctttcccaaattaaatggcacc 211  Q
    ||||||||||||||| ||||||||||| |||||||  ||||| ||||||    
T  39901894 actttcccatggtgggaaagaactctcatttcccaggttaaacggcacc 39901846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 211
Target Start/End: Original strand, 41755731 - 41755763
Alignment:
Q  179 aaagaactctcctttcccaaattaaatggcacc 211  Q
    |||| ||||||||||||||||||||||||||||    
T  41755731 aaagtactctcctttcccaaattaaatggcacc 41755763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 151
Target Start/End: Complemental strand, 42356364 - 42356296
Alignment:
Q  83 gaagatagtgtaaaaaataatttagtgttgagagagtatgataagaatgtattcctcatttaatctaat 151  Q
    ||||||||||| || || ||| |||||||||||||| ||| ||||||| | ||| ||| ||||||||||    
T  42356364 gaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaat 42356296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 144; Significance: 8e-76; HSPs: 72)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 56 - 211
Target Start/End: Original strand, 39523164 - 39523319
Alignment:
Q  56 gtgtgagaacatgaaagagagagggtggaagatagtgtaaaaaataatttagtgttgagagagtatgataagaatgtattcctcatttaatctaatggac 155  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||  |||||||||||||||||||||||||||    
T  39523164 gtgtgagaacatgaaagagagagggtggaagatagtgtaaaaaataatttagtgttgagagagtatggtaaagatgtattcctcatttaatctaatggac 39523263  T
Q  156 atgatcaactttcccatggtggaaaagaactctcctttcccaaattaaatggcacc 211  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39523264 atgatcaactttcccatggtggaaaagaactctcctttcccaaattaaatggcacc 39523319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 64 - 212
Target Start/End: Complemental strand, 11417836 - 11417686
Alignment:
Q  64 acatgaaagagagagggtggaagatagtgtaaaaa-ataatttagtg-ttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatc 161  Q
    ||||||||||||||| ||| |||||||| |||||| ||||| ||||| |||||||||||||||| |||| | ||||||||||||||||||||||||||||    
T  11417836 acatgaaagagagagtgtgaaagatagtataaaaatataatctagtggttgagagagtatgataggaatatgttcctcatttaatctaatggacatgatc 11417737  T
Q  162 aactttcccatggtggaaaagaactctcctttcccaaattaaatggcacct 212  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  11417736 aactttcccatggtgggaaagaactctcctttcccaaattaaatggcacct 11417686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 64 - 212
Target Start/End: Original strand, 10424958 - 10425108
Alignment:
Q  64 acatgaaagagagagggtggaagatagtgtaaaaaa-taatttagtg-ttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatc 161  Q
    ||||||||||||||| ||| |||||| | ||||||| |||| ||||| |||||||||||||||| |||| ||||||||||||||||||||||| ||||||    
T  10424958 acatgaaagagagagtgtgaaagataatataaaaaaataatctagtggttgagagagtatgataggaatatattcctcatttaatctaatggatatgatc 10425057  T
Q  162 aactttcccatggtggaaaagaactctcctttcccaaattaaatggcacct 212  Q
    |||||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  10425058 aactttcccatggtgggaaagaactctcctttcctaaattaaatggcacct 10425108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 64 - 212
Target Start/End: Original strand, 21166274 - 21166424
Alignment:
Q  64 acatgaaagagagagggtggaagatagtgtaaaaaa-taatttagtg-ttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatc 161  Q
    ||||||||||||||| ||| |||||||| ||||||| |||| ||||| |||||||||||||||| |||| | ||||||||||||||||||||||||||||    
T  21166274 acatgaaagagagagtgtgaaagatagtataaaaaaataatctagtggttgagagagtatgataggaatatgttcctcatttaatctaatggacatgatc 21166373  T
Q  162 aactttcccatggtggaaaagaactctcctttcccaaattaaatggcacct 212  Q
    |||||||||||| ||| |||||||||||||||| |||||||||||||||||    
T  21166374 aactttcccatgatgggaaagaactctcctttctcaaattaaatggcacct 21166424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 64 - 212
Target Start/End: Original strand, 29651231 - 29651381
Alignment:
Q  64 acatgaaagagagagggtggaagatagtgtaaaaaa-taatttagtg-ttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatc 161  Q
    ||||||||||||||| ||| |||||||| ||||||| |||| ||||| |||||||||||||||| |||| | |||||||||||||||||| || ||||||    
T  29651231 acatgaaagagagagtgtgaaagatagtataaaaaaataatctagtggttgagagagtatgataggaatatgttcctcatttaatctaatagatatgatc 29651330  T
Q  162 aactttcccatggtggaaaagaactctcctttcccaaattaaatggcacct 212  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  29651331 aactttcccatggtgggaaagaactctcctttcccaaattaaatggcacct 29651381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 64 - 211
Target Start/End: Complemental strand, 10424272 - 10424123
Alignment:
Q  64 acatgaaagagagagggtggaagatagtgtaaaaaa-taatttagtg-ttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatc 161  Q
    ||||||||||||||| ||| |||||||| ||||||| |||| ||||| ||||||||||||||||  ||| | ||||||||||||||||||||||||||||    
T  10424272 acatgaaagagagagtgtgaaagatagtataaaaaaataatctagtggttgagagagtatgatagaaatatgttcctcatttaatctaatggacatgatc 10424173  T
Q  162 aactttcccatggtggaaaagaactctcctttcccaaattaaatggcacc 211  Q
    |||||||| ||||||| |||||||||||||||||||||||||||||||||    
T  10424172 aactttcctatggtgggaaagaactctcctttcccaaattaaatggcacc 10424123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 56 - 207
Target Start/End: Original strand, 38143628 - 38143781
Alignment:
Q  56 gtgtgagaacatgaaagagagagggtggaagatagtgtaaaaaa-taatttagtg-ttgagagagtatgataagaatgtattcctcatttaatctaatgg 153  Q
    ||||||| ||||||||||||||| ||| |||||||| ||||||| |||| ||||| |||||||||||||||| |||| | ||||||||||||||||||||    
T  38143628 gtgtgaggacatgaaagagagagtgtgaaagatagtataaaaaaataatctagtggttgagagagtatgataggaatatgttcctcatttaatctaatgg 38143727  T
Q  154 acatgatcaactttcccatggtggaaaagaactctcctttcccaaattaaatgg 207  Q
    |||||| ||||||||||||||||| ||||||||||| |||||||||||||||||    
T  38143728 acatgaccaactttcccatggtgggaaagaactctcatttcccaaattaaatgg 38143781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 64 - 212
Target Start/End: Original strand, 26611182 - 26611332
Alignment:
Q  64 acatgaaagagagagggtggaagatagtgtaaaaaa-taatttagtg-ttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatc 161  Q
    ||||||||||||||| ||  |||||||| ||||||| |||| ||||| |||||||||||||||| |||| | ||||||||||||||||||||||||||||    
T  26611182 acatgaaagagagagtgtaaaagatagtataaaaaaataatctagtggttgagagagtatgataggaatatgttcctcatttaatctaatggacatgatc 26611281  T
Q  162 aactttcccatggtggaaaagaactctcctttcccaaattaaatggcacct 212  Q
    |||||||||||||||| ||| |||||||||||||||||||||||| |||||    
T  26611282 aactttcccatggtgggaaaaaactctcctttcccaaattaaatgacacct 26611332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 64 - 211
Target Start/End: Original strand, 36865616 - 36865765
Alignment:
Q  64 acatgaaagagagagggtggaagatagtgtaaaaaa-taatttagtg-ttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatc 161  Q
    ||||||||||||||| ||  |||||||| ||||||| |||| ||||| |||||||||||||||| |||| | ||||||||||||||||||||| ||||||    
T  36865616 acatgaaagagagagtgtaaaagatagtataaaaaaataatctagtggttgagagagtatgataggaatatgttcctcatttaatctaatggatatgatc 36865715  T
Q  162 aactttcccatggtggaaaagaactctcctttcccaaattaaatggcacc 211  Q
    |||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  36865716 aactttcccatggtgggaaagaactctcctttcccaaattaaatgtcacc 36865765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 64 - 210
Target Start/End: Complemental strand, 29650564 - 29650416
Alignment:
Q  64 acatgaaagagagagggtggaagatagtgtaaaaaa-taatttagtg-ttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatc 161  Q
    |||||||| |||||| ||| |||||||| ||||||| |||| ||||| |||||||||||||||| |||| | ||||||||||||||||||||||||||||    
T  29650564 acatgaaaaagagagtgtgaaagatagtataaaaaaataatctagtggttgagagagtatgataggaatatgttcctcatttaatctaatggacatgatc 29650465  T
Q  162 aactttcccatggtggaaaagaactctcctttcccaaattaaatggcac 210  Q
    |||||||||| | ||||||||||||||| ||||||||||||||||||||    
T  29650464 aactttcccaagatggaaaagaactctcatttcccaaattaaatggcac 29650416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 94 - 211
Target Start/End: Original strand, 11417867 - 11417985
Alignment:
Q  94 aaaaaataatttagtg-ttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatcaactttcccatggtggaaaagaactctcctt 192  Q
    |||||||||| ||||| |||||||||||||||| |||| | |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  11417867 aaaaaataatctagtggttgagagagtatgataggaatatgttcctcatttaatctaatggacatgatcaactttcccatggtgggaaagaactctcctt 11417966  T
Q  193 tcccaaattaaatggcacc 211  Q
    |||||||||||||| ||||    
T  11417967 tcccaaattaaatgacacc 11417985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 64 - 206
Target Start/End: Complemental strand, 26610495 - 26610350
Alignment:
Q  64 acatgaaagagagagggtggaagatagtgtaaaaaa--taatttagtg-ttgagagagtatgataagaatgtattcctcatttaatctaatggacatgat 160  Q
    ||||||||||||||| ||| |||||||| |||||||  |||| ||||| |||||||||||||||| |||| | |||||||||||||||||||||||||||    
T  26610495 acatgaaagagagagtgtgaaagatagtataaaaaaaataatctagtggttgagagagtatgataggaatatgttcctcatttaatctaatggacatgat 26610396  T
Q  161 caactttcccatggtggaaaagaactctcctttcccaaattaaatg 206  Q
    ||| ||||||||||||| ||||||||||| ||||||||||||||||    
T  26610395 caattttcccatggtgggaaagaactctcatttcccaaattaaatg 26610350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 64 - 211
Target Start/End: Original strand, 38694850 - 38695002
Alignment:
Q  64 acatgaaagagagagggtggaagatagt-gt---aaaaaataatttagt-gttgagagagtatgataagaatgtattcctcatttaatctaatggacatg 158  Q
    ||||||||||||||| ||| |||||||| ||   |||||||||| |||| ||||||||||||||||| |||| | |||||||||||||||||| ||||||    
T  38694850 acatgaaagagagagtgtgaaagatagtagtataaaaaaataatctagtggttgagagagtatgatatgaatattttcctcatttaatctaatagacatg 38694949  T
Q  159 atcaactttcccatggtggaaaagaactctcctttcccaaattaaatggcacc 211  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||||||||    
T  38694950 atcaactttctcatggtgggaaagaactctcctttcccaaattaaatggcacc 38695002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 94 - 214
Target Start/End: Original strand, 31836390 - 31836511
Alignment:
Q  94 aaaaaataatttagtg-ttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatcaactttcccatggtggaaaagaactctcctt 192  Q
    |||||||||| ||||| ||||||||||||||||  ||| | |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  31836390 aaaaaataatctagtggttgagagagtatgatagaaatatgttcctcatttaatctaatggacatgatcaactttcccatggtgggaaagaactctcctt 31836489  T
Q  193 tcccaaattaaatggcacctca 214  Q
    || |||||||||||||||||||    
T  31836490 tctcaaattaaatggcacctca 31836511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 64 - 211
Target Start/End: Complemental strand, 45230514 - 45230365
Alignment:
Q  64 acatgaaagagagagggtggaagatagtgtaaaaaa-taatttagtg-ttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatc 161  Q
    ||||||||||||||| ||| |||||||| ||||||| |||| ||||| |||||||||||||||| |||| | ||||||||||||||||||| | ||||||    
T  45230514 acatgaaagagagagtgtgaaagatagtataaaaaaataatctagtggttgagagagtatgataggaatatgttcctcatttaatctaatgaatatgatc 45230415  T
Q  162 aactttcccatggtggaaaagaactctcctttcccaaattaaatggcacc 211  Q
    |||||||||||||||| ||||||||||| |||||| ||||||||||||||    
T  45230414 aactttcccatggtgggaaagaactctcttttcccgaattaaatggcacc 45230365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 64 - 211
Target Start/End: Original strand, 45235859 - 45236008
Alignment:
Q  64 acatgaaagagagagggtggaagatagtgtaaaaaa-taatttagtg-ttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatc 161  Q
    ||||||||||||||| ||| |||||||| ||||||| |||| ||||| |||||||| |||||||  ||| | |||||||||||||||||||||||||||     
T  45235859 acatgaaagagagagtgtgaaagatagtataaaaaaataatctagtggttgagagaatatgatagaaatatgttcctcatttaatctaatggacatgatt 45235958  T
Q  162 aactttcccatggtggaaaagaactctcctttcccaaattaaatggcacc 211  Q
    |||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  45235959 aactttcccatggtgggaaagaactctccttttccaaattaaatggcacc 45236008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 64 - 212
Target Start/End: Complemental strand, 39522524 - 39522374
Alignment:
Q  64 acatgaaagagagagggtggaagatagtgtaaaaaa-taatttagtg-ttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatc 161  Q
    ||||||||||| ||| | | |||||||| ||||||| |||| ||||| |||||||||||||||| |||| | ||||||||||||||||||||| ||||||    
T  39522524 acatgaaagagggagtgcgaaagatagtataaaaaaataatctagtggttgagagagtatgataggaatatgttcctcatttaatctaatggatatgatc 39522425  T
Q  162 aactttcccatggtggaaaagaactctcctttcccaaattaaatggcacct 212  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||| |||||    
T  39522424 aactttcccatggtgaaaaagaactatcctttcccaaattaaatgacacct 39522374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 94 - 212
Target Start/End: Original strand, 9939301 - 9939420
Alignment:
Q  94 aaaaaataatttagtg-ttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatcaactttcccatggtggaaaagaactctcctt 192  Q
    |||||||||| ||||| |||||||||||||||| |||| | |||||||||||||||||||||||||||||||||| ||||||||| ||||||||| ||||    
T  9939301 aaaaaataatatagtggttgagagagtatgataggaatatgttcctcatttaatctaatggacatgatcaacttttccatggtgggaaagaactcccctt 9939400  T
Q  193 tcccaaattaaatggcacct 212  Q
    || |||||||||||||||||    
T  9939401 tctcaaattaaatggcacct 9939420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 64 - 211
Target Start/End: Complemental strand, 21165596 - 21165447
Alignment:
Q  64 acatgaaagagagagggtggaagatagtgtaaaaaat-aatttagtg-ttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatc 161  Q
    ||||||||||||||  ||| |||||||| |||||||| ||| ||||| ||||||||||||||||  ||| | |||||||||||||| |||||||||||||    
T  21165596 acatgaaagagagactgtgaaagatagtataaaaaattaatctagtggttgagagagtatgatagaaatatgttcctcatttaatcaaatggacatgatc 21165497  T
Q  162 aactttcccatggtggaaaagaactctcctttcccaaattaaatggcacc 211  Q
    ||||||| |||||||| |||||||| | ||||||||||||||||||||||    
T  21165496 aactttctcatggtgggaaagaactattctttcccaaattaaatggcacc 21165447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 66 - 212
Target Start/End: Complemental strand, 9939269 - 9939124
Alignment:
Q  66 atgaaagagagagggtggaagatagtgtaaaaaa-taatttagtg-ttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatcaa 163  Q
    ||||||||||||  ||| |||||||| ||||||| |||| ||||| ||||||||||||||||||||| | || |||||||||||||||||||||||||||    
T  9939269 atgaaagagagaatgtgaaagatagtataaaaaaataatctagtggttgagagagtatgataagaatatgtttctcatttaatctaatggacatgatcaa 9939170  T
Q  164 ctttcccatggtggaaaagaactctcctttcccaaattaaatggcacct 212  Q
    ||||||||   | |||||||||||| ||||||||||||||||| |||||    
T  9939169 ctttccca---tagaaaagaactctactttcccaaattaaatgacacct 9939124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 64 - 211
Target Start/End: Complemental strand, 31835297 - 31835148
Alignment:
Q  64 acatgaaagagagagggtggaagatagtgtaaaaa-ataatttagtg-ttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatc 161  Q
    ||||||||||||||| ||| |||||||| |||||| ||||| ||||| |||||||||||||||| |||| | |||||| ||||||||||||||||| |||    
T  31835297 acatgaaagagagagtgtgaaagatagtataaaaagataatctagtggttgagagagtatgataggaatatgttcctcgtttaatctaatggacataatc 31835198  T
Q  162 aactttcccatggtggaaaagaactctcctttcccaaattaaatggcacc 211  Q
    |||||||| ||||||| |||||||| | ||||  ||||||||||||||||    
T  31835197 aactttcctatggtgggaaagaactatactttttcaaattaaatggcacc 31835148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 94 - 210
Target Start/End: Complemental strand, 36864935 - 36864818
Alignment:
Q  94 aaaaaataatttagtg-ttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatcaactttcccatggtggaaaagaactctcctt 192  Q
    |||||||||| ||||| |||||||||||||||| |||| | || |||||||||||||||||||||||||||||||| |||||||  ||||||||||||||    
T  36864935 aaaaaataatctagtggttgagagagtatgataggaatatgtttctcatttaatctaatggacatgatcaactttctcatggtgagaaagaactctcctt 36864836  T
Q  193 tcccaaattaaatggcac 210  Q
    ||||||||||||| ||||    
T  36864835 tcccaaattaaatagcac 36864818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 94 - 193
Target Start/End: Complemental strand, 38143606 - 38143506
Alignment:
Q  94 aaaaaataatttagtg-ttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatcaactttcccatggtggaaaagaactctcctt 192  Q
    |||||||||| ||||| |||||||||||||||| |||| | |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  38143606 aaaaaataatctagtggttgagagagtatgataggaatatgttcctcatttaatctaatggacatgatcaactttcctatggtggaaaagaactctcctt 38143507  T
Q  193 t 193  Q
    |    
T  38143506 t 38143506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 64 - 181
Target Start/End: Original strand, 17648044 - 17648162
Alignment:
Q  64 acatgaaagagagagggtggaagatagtgtaaaa-aataatttagtgttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatca 162  Q
    |||||||||||||||| ||||||||||||||||| |||||| |||||||||||||||| ||||||||| |||| || ||||||||||||||| || ||||    
T  17648044 acatgaaagagagaggatggaagatagtgtaaaacaataatatagtgttgagagagtaagataagaatttatttcttatttaatctaatggatataatca 17648143  T
Q  163 actttcccatggtggaaaa 181  Q
    |||||| ||| ||||||||    
T  17648144 actttcacatagtggaaaa 17648162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 94 - 211
Target Start/End: Complemental strand, 38694820 - 38694702
Alignment:
Q  94 aaaaaataatttagtg-ttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatcaactttcccatggtggaaaagaactctcctt 192  Q
    |||||||||| ||||| |||||||||||||||| |||| | ||||||||||||||||||| | |||||||||||| ||||| ||| ||||||||||||||    
T  38694820 aaaaaataatctagtggttgagagagtatgataggaatatgttcctcatttaatctaatgaatatgatcaacttttccatgctgggaaagaactctcctt 38694721  T
Q  193 tcccaaattaaatggcacc 211  Q
    | |||||||||||||||||    
T  38694720 ttccaaattaaatggcacc 38694702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 56 - 173
Target Start/End: Complemental strand, 11806244 - 11806129
Alignment:
Q  56 gtgtgagaacatgaaagagagagggtggaagatagtgtaaaaaataatttagtgttgagagagtatgataagaatgtattcctcatttaatctaatggac 155  Q
    |||||||||||||||||||||||  || |  ||| ||||||||||||  |||||||||||||||| ||||| ||||| ||||||||||||||||||||||    
T  11806244 gtgtgagaacatgaaagagagag--tgaataataatgtaaaaaataaactagtgttgagagagtaggataaaaatgtgttcctcatttaatctaatggac 11806147  T
Q  156 atgatcaactttcccatg 173  Q
    ||||| ||||||||||||    
T  11806146 atgattaactttcccatg 11806129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 64 - 197
Target Start/End: Original strand, 36451327 - 36451461
Alignment:
Q  64 acatgaaagagagagggtggaagatagtgtaaaa-aataatttagtgttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatca 162  Q
    |||||||||||||| ||||||||||||||||||| |||||| |||||||||||||||| |||||| || | ||  |||||||||||||||||||| ||||    
T  36451327 acatgaaagagagatggtggaagatagtgtaaaacaataatctagtgttgagagagtaggataaggatttgtttttcatttaatctaatggacataatca 36451426  T
Q  163 actttcccatggtggaaaagaactctcctttccca 197  Q
    ||||| ||||||||  ||| |||||  ||||||||    
T  36451427 acttttccatggtgagaaacaactcctctttccca 36451461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 64 - 197
Target Start/End: Complemental strand, 25970250 - 25970120
Alignment:
Q  64 acatgaaagagagagggtggaagatagtgtaaaa-aataatttagtgttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatca 162  Q
    |||||||||||||| ||||||||||||||||||| |||||| |||   ||||||||||||||||  || | || ||||||||||||||||||||| ||||    
T  25970250 acatgaaagagagatggtggaagatagtgtaaaacaataatctag---tgagagagtatgataaagatttgtttctcatttaatctaatggacat-atca 25970155  T
Q  163 actttcccatggtggaaaagaactctcctttccca 197  Q
    ||||||||||||||| ||| ||||| |||||||||    
T  25970154 actttcccatggtgggaaacaactcccctttccca 25970120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 64 - 194
Target Start/End: Complemental strand, 23383457 - 23383327
Alignment:
Q  64 acatgaaagagagagggtggaagatagtgtaaaaaataatttagtgttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatcaa 163  Q
    ||||| ||||||||||||||||||||||||||||| |||| |||| ||||  ||||||||||||| ||| ||| |||||| ||| |||||| |  || ||    
T  23383457 acatggaagagagagggtggaagatagtgtaaaaattaatctagtattgatggagtatgataagagtgtgttcttcatttgatcgaatggataaaattaa 23383358  T
Q  164 ctttcccatggtggaaaagaactctcctttc 194  Q
    |||||||||||||| ||| ||||||||||||    
T  23383357 ctttcccatggtgggaaacaactctcctttc 23383327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 70 - 197
Target Start/End: Complemental strand, 36450871 - 36450742
Alignment:
Q  70 aagagagagggtggaagatagtgtaaaa-aataatttagtgt-tgagagagtatgataagaatgtattcctcatttaatctaatggacatgatcaacttt 167  Q
    |||||||| ||||||||||||||||||| || ||| |||||| |||||||||| |||||  || | || ||||||||||| ||||||||| |||||||||    
T  36450871 aagagagatggtggaagatagtgtaaaacaacaatctagtgtatgagagagtaggataaagatttgttactcatttaatccaatggacataatcaacttt 36450772  T
Q  168 cccatggtggaaaagaactctcctttccca 197  Q
    |||||||||||||| ||||| |||||||||    
T  36450771 cccatggtggaaaacaactcccctttccca 36450742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 63 - 212
Target Start/End: Original strand, 25970701 - 25970852
Alignment:
Q  63 aacatgaaagagagagggtggaagatagtgtaaaa-aataatttagtgt-tgagagagtatgataagaatgtattcctcatttaatctaatggacatgat 160  Q
    |||| |||||||||| ||||||||||||||||||| || ||| |||||| |||||||||| |||||  || | || ||||||||||  ||||||||| ||    
T  25970701 aacaagaaagagagatggtggaagatagtgtaaaacaacaatctagtgtatgagagagtaggataaagatttgttactcatttaattcaatggacataat 25970800  T
Q  161 caactttcccatggtggaaaagaactctcctttcccaaattaaatggcacct 212  Q
    |||||||| |||||||| ||| ||||| | ||||||| | |||||| |||||    
T  25970801 caactttctcatggtgggaaacaactcccttttcccatactaaatgccacct 25970852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 39522605 - 39522655
Alignment:
Q  1 tggttgctgccggaaaacttgttaacgtaccattttcaaggatcaaacaaa 51  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||||||||    
T  39522605 tggttgctgccgaaaaacttgttagcgtaccattttcaaggatcaaacaaa 39522655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 119 - 211
Target Start/End: Complemental strand, 30808713 - 30808621
Alignment:
Q  119 tatgataagaatgtattcctcatttaatctaatggacatgatcaactttcccatggtggaaaagaactctcctttcccaaattaaatggcacc 211  Q
    |||||||||||||||||| | | |||||||||||| ||   | |||||||||||||||| ||| |||||||||||||||  ||||||| ||||    
T  30808713 tatgataagaatgtattcattacttaatctaatggtcaaatttaactttcccatggtgggaaacaactctcctttcccattttaaatgccacc 30808621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 163 - 214
Target Start/End: Complemental strand, 47198653 - 47198602
Alignment:
Q  163 actttcccatggtggaaaagaactctcctttcccaaattaaatggcacctca 214  Q
    ||||||||||||||| |||||| ||||||||||||||||||||| |||||||    
T  47198653 actttcccatggtgggaaagaagtctcctttcccaaattaaatgtcacctca 47198602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 162 - 213
Target Start/End: Original strand, 47377597 - 47377648
Alignment:
Q  162 aactttcccatggtggaaaagaactctcctttcccaaattaaatggcacctc 213  Q
    |||||||||||||||| ||| ||||| |||||||||||||||||||||||||    
T  47377597 aactttcccatggtgggaaacaactcccctttcccaaattaaatggcacctc 47377648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 83 - 153
Target Start/End: Complemental strand, 5825459 - 5825392
Alignment:
Q  83 gaagatagtgtaaaaaataatttagtgttgagagagtatgataagaatgtattcctcatttaatctaatgg 153  Q
    ||||||||||||||||||    |||||||||||||||| ||||| ||||| |||||||||| |||||||||    
T  5825459 gaagatagtgtaaaaaatc---tagtgttgagagagtaggataataatgtgttcctcatttgatctaatgg 5825392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 163 - 206
Target Start/End: Original strand, 3848578 - 3848621
Alignment:
Q  163 actttcccatggtggaaaagaactctcctttcccaaattaaatg 206  Q
    ||||||||||||||| |||||| |||||||||||||||||||||    
T  3848578 actttcccatggtgggaaagaagtctcctttcccaaattaaatg 3848621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 95 - 177
Target Start/End: Original strand, 35428091 - 35428173
Alignment:
Q  95 aaaaataatttagtgttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatcaactttcccatggtgg 177  Q
    |||||||||||||||||||| ||| ||||||| ||||| ||| | |||  |||| |||| ||||| |||||||||||| ||||    
T  35428091 aaaaataatttagtgttgagggagcatgataaaaatgtgttcttaattagatctgatggtcatgaacaactttcccatagtgg 35428173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 211
Target Start/End: Complemental strand, 37275137 - 37275088
Alignment:
Q  162 aactttcccatggtggaaaagaactctcctttcccaaattaaatggcacc 211  Q
    ||||||| |||||||| |||||| ||||||||||||||||||| ||||||    
T  37275137 aactttctcatggtgggaaagaagtctcctttcccaaattaaacggcacc 37275088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 158 - 211
Target Start/End: Complemental strand, 47376905 - 47376852
Alignment:
Q  158 gatcaactttcccatggtggaaaagaactctcctttcccaaattaaatggcacc 211  Q
    |||||||||||||||| ||| ||| ||||| |||||||||||||||||| ||||    
T  47376905 gatcaactttcccatgatgggaaacaactcccctttcccaaattaaatgccacc 47376852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 211
Target Start/End: Original strand, 10424387 - 10424419
Alignment:
Q  179 aaagaactctcctttcccaaattaaatggcacc 211  Q
    |||||||||||||||||||||||||||||||||    
T  10424387 aaagaactctcctttcccaaattaaatggcacc 10424419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 153
Target Start/End: Complemental strand, 12589393 - 12589345
Alignment:
Q  105 tagtgttgagagagtatgataagaatgtattcctcatttaatctaatgg 153  Q
    |||| ||||| |||||||||| |||||||||| ||||||||||||||||    
T  12589393 tagtattgagggagtatgatatgaatgtattcttcatttaatctaatgg 12589345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 211
Target Start/End: Complemental strand, 21166169 - 21166137
Alignment:
Q  179 aaagaactctcctttcccaaattaaatggcacc 211  Q
    |||||||||||||||||||||||||||||||||    
T  21166169 aaagaactctcctttcccaaattaaatggcacc 21166137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 211
Target Start/End: Original strand, 25371545 - 25371593
Alignment:
Q  163 actttcccatggtggaaaagaactctcctttcccaaattaaatggcacc 211  Q
    |||||| |||||||| |||||| ||||||||||||||||||||| ||||    
T  25371545 actttctcatggtgggaaagaagtctcctttcccaaattaaatgtcacc 25371593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 211
Target Start/End: Original strand, 29650657 - 29650689
Alignment:
Q  179 aaagaactctcctttcccaaattaaatggcacc 211  Q
    |||||||||||||||||||||||||||||||||    
T  29650657 aaagaactctcctttcccaaattaaatggcacc 29650689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 211
Target Start/End: Complemental strand, 31836253 - 31836221
Alignment:
Q  179 aaagaactctcctttcccaaattaaatggcacc 211  Q
    |||||||||||||||||||||||||||||||||    
T  31836253 aaagaactctcctttcccaaattaaatggcacc 31836221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 211
Target Start/End: Original strand, 38014870 - 38014970
Alignment:
Q  111 tgagagagtatgataagaatgtattcctcatttaatctaatggacatgatcaactttcccatggtggaaaagaactctcctttcccaaattaaatggcac 210  Q
    |||||||||||||| | ||||| |||||||||| |||||| || ||  |  | ||||||||||||||  || ||||  |||||||||||||||| |||||    
T  38014870 tgagagagtatgattaaaatgtgttcctcatttgatctaacggtcaaaaaaacctttcccatggtggggaaaaactagcctttcccaaattaaacggcac 38014969  T
Q  211 c 211  Q
    |    
T  38014970 c 38014970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 211
Target Start/End: Complemental strand, 45235765 - 45235733
Alignment:
Q  179 aaagaactctcctttcccaaattaaatggcacc 211  Q
    |||||||||||||||||||||||||||||||||    
T  45235765 aaagaactctcctttcccaaattaaatggcacc 45235733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 163 - 206
Target Start/End: Complemental strand, 3847934 - 3847891
Alignment:
Q  163 actttcccatggtggaaaagaactctcctttcccaaattaaatg 206  Q
    ||||||||||||||| ||| || |||||||||||||||||||||    
T  3847934 actttcccatggtgggaaaaaagtctcctttcccaaattaaatg 3847891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 151
Target Start/End: Complemental strand, 199129 - 199059
Alignment:
Q  81 tggaagatagtgtaaaaaataatttagtgttgagagagtatgataagaatgtattcctcatttaatctaat 151  Q
    ||||||||||||| || || ||| |||||||||||||| ||| ||||||| | ||| ||| ||||||||||    
T  199129 tggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaat 199059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 204
Target Start/End: Original strand, 12590202 - 12590244
Alignment:
Q  162 aactttcccatggtggaaaagaactctcctttcccaaattaaa 204  Q
    |||||||||||||||||||| ||||  ||||||||||||||||    
T  12590202 aactttcccatggtggaaaaaaactagcctttcccaaattaaa 12590244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 151
Target Start/End: Complemental strand, 20075655 - 20075585
Alignment:
Q  81 tggaagatagtgtaaaaaataatttagtgttgagagagtatgataagaatgtattcctcatttaatctaat 151  Q
    ||||||||||||| || || ||| |||||||||||||| ||| ||||||| | ||| ||| ||||||||||    
T  20075655 tggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaat 20075585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 197
Target Start/End: Original strand, 26424360 - 26424476
Alignment:
Q  81 tggaagatagtgtaaaaaataatttagtgttgagagagtatgataagaatgtattcctcatttaatctaatggacatg--atc-aactttcccatggtgg 177  Q
    ||||||||||||| || || ||| ||||||||| |||| ||| ||||||| | ||| ||| ||||||||||   |||   ||| ||||||||||||||||    
T  26424360 tggaagatagtgtgaagaaaaatctagtgttgaaagagcatgttaagaatatgttcttcacttaatctaat---cattgaatccaactttcccatggtgg 26424456  T
Q  178 aaaagaactctcctttccca 197  Q
    |||||||||  |||||||||    
T  26424457 aaaagaactaacctttccca 26424476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 209
Target Start/End: Original strand, 30478884 - 30478930
Alignment:
Q  163 actttcccatggtggaaaagaactctcctttcccaaattaaatggca 209  Q
    ||||||||||| |||||||||| | | ||||||||||||||||||||    
T  30478884 actttcccatgatggaaaagaagtttgctttcccaaattaaatggca 30478930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 151
Target Start/End: Complemental strand, 31876918 - 31876848
Alignment:
Q  81 tggaagatagtgtaaaaaataatttagtgttgagagagtatgataagaatgtattcctcatttaatctaat 151  Q
    ||||||||||||| || || ||| |||||||||||||| ||| ||||||| | ||| ||| ||||||||||    
T  31876918 tggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaat 31876848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 197
Target Start/End: Complemental strand, 45330669 - 45330579
Alignment:
Q  107 gtgttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatcaactttcccatggtggaaaagaactctcctttccca 197  Q
    ||||||||||  |||||||||||||||||| | | |||||||| ||| ||   | |||||| ||||||||| ||| ||||| |||||||||    
T  45330669 gtgttgagagtctatgataagaatgtattcattacttaatctagtggtcaaatttaacttttccatggtgggaaacaactcccctttccca 45330579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 151
Target Start/End: Complemental strand, 48781612 - 48781542
Alignment:
Q  81 tggaagatagtgtaaaaaataatttagtgttgagagagtatgataagaatgtattcctcatttaatctaat 151  Q
    ||||||||||||| || || ||||||||||||| | || ||| ||||||| ||||| ||| ||||||||||    
T  48781612 tggaagatagtgtgaagaaaaatttagtgttgaaaaagcatgttaagaatatattcatcacttaatctaat 48781542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 151
Target Start/End: Original strand, 52597667 - 52597737
Alignment:
Q  81 tggaagatagtgtaaaaaataatttagtgttgagagagtatgataagaatgtattcctcatttaatctaat 151  Q
    ||||||||||||| || || ||| |||||||||||||| ||| ||||||| | ||| ||| ||||||||||    
T  52597667 tggaagatagtgtgaagaaaaatctagtgttgagagagcatggtaagaatatgttcttcacttaatctaat 52597737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 205
Target Start/End: Complemental strand, 55159228 - 55159186
Alignment:
Q  163 actttcccatggtggaaaagaactctcctttcccaaattaaat 205  Q
    ||||||||||||| | |||||| ||||||||||||||||||||    
T  55159228 actttcccatggtaggaaagaagtctcctttcccaaattaaat 55159186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 151
Target Start/End: Complemental strand, 55815955 - 55815885
Alignment:
Q  81 tggaagatagtgtaaaaaataatttagtgttgagagagtatgataagaatgtattcctcatttaatctaat 151  Q
    ||||||||||||| || || ||| ||||||| |||||| ||||||||||| | ||| ||| ||||||||||    
T  55815955 tggaagatagtgtgaagaaaaatctagtgttaagagagcatgataagaatatgttcttcacttaatctaat 55815885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 163 - 212
Target Start/End: Complemental strand, 30478357 - 30478308
Alignment:
Q  163 actttcccatggtggaaaagaactctcctttcccaaattaaatggcacct 212  Q
    ||||||||||| ||| |||||| | | |||||||||||||||||||||||    
T  30478357 actttcccatgatgggaaagaagtttgctttcccaaattaaatggcacct 30478308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 107 - 212
Target Start/End: Original strand, 30809449 - 30809554
Alignment:
Q  107 gtgttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatcaactttcccatggtggaaaagaactctcctttcccaaattaaatg 206  Q
    ||||||||||  |||||||| ||||| ||| | | |||||||| ||| ||   | ||||||| |||||||||||| ||||| |||||||||  |||||||    
T  30809449 gtgttgagagtctatgataaaaatgtgttcattacttaatctagtggtcaaatttaactttctcatggtggaaaacaactcccctttcccattttaaatg 30809548  T
Q  207 gcacct 212  Q
     |||||    
T  30809549 ccacct 30809554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 163 - 212
Target Start/End: Complemental strand, 42544536 - 42544487
Alignment:
Q  163 actttcccatggtggaaaagaactctcctttcccaaattaaatggcacct 212  Q
    ||||| ||||||||| ||| || ||| |||||||||||||||||||||||    
T  42544536 acttttccatggtgggaaaaaagtcttctttcccaaattaaatggcacct 42544487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 105 - 214
Target Start/End: Original strand, 46765110 - 46765219
Alignment:
Q  105 tagtgttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatcaactttcccatggtggaaaagaactctcctttcccaaattaaa 204  Q
    |||| ||||| |||||||||| || ||||||| ||||||||||||||||     |    |||||||||||||| ||| ||||   |||||||||||||||    
T  46765110 tagtattgagggagtatgatatgactgtattcttcatttaatctaatggttgaaacttgctttcccatggtgggaaaaaactagtctttcccaaattaaa 46765209  T
Q  205 tggcacctca 214  Q
    || |||||||    
T  46765210 tgccacctca 46765219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 163 - 212
Target Start/End: Original strand, 47199395 - 47199444
Alignment:
Q  163 actttcccatggtggaaaagaactctcctttcccaaattaaatggcacct 212  Q
    ||||||| ||||||| |||||| |||| |||||||||||||||| |||||    
T  47199395 actttcctatggtgggaaagaagtctcttttcccaaattaaatgccacct 47199444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 163 - 212
Target Start/End: Complemental strand, 48013365 - 48013316
Alignment:
Q  163 actttcccatggtggaaaagaactctcctttcccaaattaaatggcacct 212  Q
    ||||||||||| ||| |||||| | | |||||||||||||||||||||||    
T  48013365 actttcccatgatgggaaagaagtttgctttcccaaattaaatggcacct 48013316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 204
Target Start/End: Original strand, 10421558 - 10421622
Alignment:
Q  140 atttaatctaatggacatgatcaactttcccatggtggaaaagaactctcctttcccaaattaaa 204  Q
    ||||||||||| || ||  || | |||||||||||||||||| ||||  ||||||||||||||||    
T  10421558 atttaatctaacggtcaaaattagctttcccatggtggaaaacaacttccctttcccaaattaaa 10421622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 128
Target Start/End: Original strand, 20822706 - 20822754
Alignment:
Q  81 tggaagatagtgtaaaaaataatttagtgtt-gagagagtatgataaga 128  Q
    ||||||||||||||||||||||| |||||||  |||||||| |||||||    
T  20822706 tggaagatagtgtaaaaaataatatagtgttaaagagagtacgataaga 20822754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 211
Target Start/End: Complemental strand, 26611088 - 26611056
Alignment:
Q  179 aaagaactctcctttcccaaattaaatggcacc 211  Q
    ||||||||||| |||||||||||||||||||||    
T  26611088 aaagaactctcatttcccaaattaaatggcacc 26611056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 197
Target Start/End: Complemental strand, 41261192 - 41261136
Alignment:
Q  141 tttaatctaatggacatgatcaactttcccatggtggaaaagaactctcctttccca 197  Q
    |||||||||||||  | ||  |||||||||||||||||||| |||| ||||||||||    
T  41261192 tttaatctaatggttaagaaaaactttcccatggtggaaaacaactttcctttccca 41261136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 170
Target Start/End: Complemental strand, 51412724 - 51412637
Alignment:
Q  82 ggaagatagtgtaaaaaataatttagtgttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatcaactttccc 170  Q
    |||||||||||| ||||| |||| ||||||||||||  ||||||||| |||  |||| |||||||| |||||  |  ||||||||||||    
T  51412724 ggaagatagtgtgaaaaa-aattcagtgttgagagaacatgataagagtgtgctccttatttaatcaaatggctaaaatcaactttccc 51412637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 167
Target Start/End: Original strand, 53535835 - 53535903
Alignment:
Q  99 ataatttagtgttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatcaacttt 167  Q
    ||||| ||||||| || ||||| ||||| ||| ||||  ||||||||||||||||| || |||||||||    
T  53535835 ataatctagtgttaagtgagtaagataacaatatatttttcatttaatctaatggatataatcaacttt 53535903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 141; Significance: 5e-74; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 56 - 212
Target Start/End: Complemental strand, 33002087 - 33001931
Alignment:
Q  56 gtgtgagaacatgaaagagagagggtggaagatagtgtaaaaaataatttagtgttgagagagtatgataagaatgtattcctcatttaatctaatggac 155  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  33002087 gtgtgagaacatgaaagagagagggtggaagatagtgtaaaaaataatttagtgttgagagaatatgataagaatgtattcctcatttaatctaatggac 33001988  T
Q  156 atgatcaactttcccatggtggaaaagaactctcctttcccaaattaaatggcacct 212  Q
    |||||||||||| ||||||||| ||||||||||||||||||||||||||||| ||||    
T  33001987 atgatcaacttttccatggtgggaaagaactctcctttcccaaattaaatggtacct 33001931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 64 - 212
Target Start/End: Complemental strand, 8040344 - 8040194
Alignment:
Q  64 acatgaaagagagagggtggaagatagtgtaaaaaa-taatttagtg-ttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatc 161  Q
    ||||||||||||||| ||| |||||||| ||||||| |||| ||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  8040344 acatgaaagagagagtgtgaaagatagtataaaaaaataatgtagtggttgagagagtatgataagaatatattcctcatttaatctaatggacatgatc 8040245  T
Q  162 aactttcccatggtggaaaagaactctcctttcccaaattaaatggcacct 212  Q
    |||||||||| | ||| |||||||| |||||||||||||||||||||||||    
T  8040244 aactttcccacgatgggaaagaactgtcctttcccaaattaaatggcacct 8040194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 64 - 212
Target Start/End: Original strand, 33002715 - 33002865
Alignment:
Q  64 acatgaaagagagagggtggaagatagtgtaaaaaa-taatttagtg-ttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatc 161  Q
    ||||||||||||||| ||| |||||||| ||||||| |||| ||||| |||||||||||||||| |||| | ||||||||||||||||||||||||||||    
T  33002715 acatgaaagagagagtgtgaaagatagtataaaaaaataatctagtggttgagagagtatgataggaatatgttcctcatttaatctaatggacatgatc 33002814  T
Q  162 aactttcccatggtggaaaagaactctcctttcccaaattaaatggcacct 212  Q
    |||||||||||||||| |||||||||||||||||||||||||||| |||||    
T  33002815 aactttcccatggtgggaaagaactctcctttcccaaattaaatgacacct 33002865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 64 - 211
Target Start/End: Original strand, 15183916 - 15184065
Alignment:
Q  64 acatgaaagagagagggtggaagatagtgtaaaaaa-taatttagtg-ttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatc 161  Q
    ||||||||||||||| ||| |||||||  ||||||| |||| ||||| |||||||||||||||| |||| | ||||||||||||||||||||||||||||    
T  15183916 acatgaaagagagagtgtgaaagatagcataaaaaaataatctagtggttgagagagtatgataggaatatgttcctcatttaatctaatggacatgatc 15184015  T
Q  162 aactttcccatggtggaaaagaactctcctttcccaaattaaatggcacc 211  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  15184016 aactttcccatggtgggaaagaactctcctttcccaaattaaatggcacc 15184065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 64 - 210
Target Start/End: Original strand, 687247 - 687395
Alignment:
Q  64 acatgaaagagagagggtggaagatagtgtaaaaaa-taatttagtg-ttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatc 161  Q
    ||||||||||||||| ||| |||||||| ||||||| |||||||||| |||||||||||||||| |||| | |||||||||||||||||||||||| |||    
T  687247 acatgaaagagagagtgtgaaagatagtataaaaaaataatttagtgattgagagagtatgataggaatatgttcctcatttaatctaatggacataatc 687346  T
Q  162 aactttcccatggtggaaaagaactctcctttcccaaattaaatggcac 210  Q
    |||||| |||| |||||||||||||||||||||||||||||||||||||    
T  687347 aacttttccatagtggaaaagaactctcctttcccaaattaaatggcac 687395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 66 - 212
Target Start/End: Complemental strand, 8204267 - 8204119
Alignment:
Q  66 atgaaagagagagggtggaagatagtgtaaaaaa-taatttagtg-ttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatcaa 163  Q
    ||||||||||||| ||| |||||||| ||||||| |||| ||||| |||||| ||||||||| |||| | ||||||||||||||||||||||||||||||    
T  8204267 atgaaagagagagtgtgaaagatagtataaaaaaataatctagtggttgagatagtatgataggaatatgttcctcatttaatctaatggacatgatcaa 8204168  T
Q  164 ctttcccatggtggaaaagaactctcctttcccaaattaaatggcacct 212  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  8204167 ctttcccatggtgggaaagaactctcctttcccaaattaaatggcacct 8204119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 64 - 211
Target Start/End: Complemental strand, 686565 - 686417
Alignment:
Q  64 acatgaaagagagagggtggaagatagtgtaaaaaa-taatttagtg-ttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatc 161  Q
    ||||||||||||||| ||| |||||||| ||||||| |||| ||||| |||||||| ||||||| |||| ||||||||||||||||||||||||||||||    
T  686565 acatgaaagagagagtgtgaaagatagtataaaaaaataatctagtggttgagagaatatgataggaatatattcctcatttaatctaatggacatgatc 686466  T
Q  162 aactttcccatggtggaaaagaactctcctttcccaaattaaatggcacc 211  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||||||    
T  686465 aactttcccatggtgggaaa-aactctcctttcccaaattaaatggcacc 686417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 109 - 212
Target Start/End: Original strand, 36626576 - 36626679
Alignment:
Q  109 gttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatcaactttcccatggtggaaaagaactctcctttcccaaattaaatggc 208  Q
    |||||||||||||||||||||| ||||||| ||||||| ||| |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  36626576 gttgagagagtatgataagaatatattccttatttaatataacggacatgatcaactttcccatggtgggaaagaactctcatttcccaaattaaatggc 36626675  T
Q  209 acct 212  Q
    ||||    
T  36626676 acct 36626679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 84 - 212
Target Start/End: Original strand, 12190078 - 12190207
Alignment:
Q  84 aagatagtgtaaaaaataatttagtg-ttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatcaactttcccatggtggaaaag 182  Q
    |||||| | ||||||||||| || || ||||||||||||||||  ||| | |||||||||||||||||||||||||||||||||||||||||||| |||     
T  12190078 aagataatataaaaaataatctaatgattgagagagtatgatagaaatatgttcctcatttaatctaatggacatgatcaactttcccatggtgggaaaa 12190177  T
Q  183 aactctcctttcccaaattaaatggcacct 212  Q
    ||||||| ||||||||||||||||||||||    
T  12190178 aactctcttttcccaaattaaatggcacct 12190207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 64 - 211
Target Start/End: Complemental strand, 15183238 - 15183088
Alignment:
Q  64 acatgaaagagagagggtggaagatagtgtaaaaaa-taatttagtg-ttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatc 161  Q
    ||||||||| ||||| ||| |||||||| ||||||| |||| ||||| ||||||||||||||||  ||| | ||||||||||||||||||||||||||||    
T  15183238 acatgaaagtgagagtgtgaaagatagtataaaaaaataatctagtggttgagagagtatgatagaaatatgttcctcatttaatctaatggacatgatc 15183139  T
Q  162 aactttcccatggt-ggaaaagaactctcctttcccaaattaaatggcacc 211  Q
    ||||||| |||| | |||||  |||||||||||||||||||||||||||||    
T  15183138 aactttctcatgatgggaaataaactctcctttcccaaattaaatggcacc 15183088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 94 - 212
Target Start/End: Original strand, 8040374 - 8040493
Alignment:
Q  94 aaaaaataatttagtg-ttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatcaactttcccatggtggaaaagaactctcctt 192  Q
    |||||||||| ||||| ||||||||||||||||  ||| | ||||  ||||||||||||||||||||| |||||||||| ||||| |||||| | |||||    
T  8040374 aaaaaataatctagtggttgagagagtatgatagaaatatgttccctatttaatctaatggacatgattaactttcccacggtgggaaagaaatttcctt 8040473  T
Q  193 tcccaaattaaatggcacct 212  Q
    ||||||||||||||||||||    
T  8040474 tcccaaattaaatggcacct 8040493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 100 - 212
Target Start/End: Original strand, 33283960 - 33284072
Alignment:
Q  100 taatttagtgttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatcaactttcccatggtggaaaagaactctcctttcccaaa 199  Q
    |||||||||| |||||||||||||||| ||||| |||||||||| |||||| || ||  |  | |||||||||||||| | | ||||  |||||||||||    
T  33283960 taatttagtgatgagagagtatgataaaaatgtgttcctcatttgatctaacggtcaaaaaaacctttcccatggtgggataaaactaacctttcccaaa 33284059  T
Q  200 ttaaatggcacct 212  Q
    |||||||||||||    
T  33284060 ttaaatggcacct 33284072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 33002634 - 33002584
Alignment:
Q  1 tggttgctgccggaaaacttgttaacgtaccattttcaaggatcaaacaaa 51  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  33002634 tggttgctgccggaaaacttgttagcgtaccattttcaaggatcaaacaaa 33002584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 164 - 211
Target Start/End: Complemental strand, 39950451 - 39950404
Alignment:
Q  164 ctttcccatggtggaaaagaactctcctttcccaaattaaatggcacc 211  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||    
T  39950451 ctttcccatggtgggaaagaactctcctttcccaaattaaatggcacc 39950404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 73 - 154
Target Start/End: Complemental strand, 42518891 - 42518809
Alignment:
Q  73 agagagggtggaagatagtgtaaaa-aataatttagtgttgagagagtatgataagaatgtattcctcatttaatctaatgga 154  Q
    |||||||||| || ||||| ||||| |||||||||||||||||| |||| ||||||||| | || ||||||||||||||||||    
T  42518891 agagagggtgaaaaatagtataaaacaataatttagtgttgagatagtacgataagaatttgtttctcatttaatctaatgga 42518809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 100 - 207
Target Start/End: Complemental strand, 33283276 - 33283169
Alignment:
Q  100 taatttagtgttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatcaactttcccatggtggaaaagaactctcctttcccaaa 199  Q
    |||| ||||| |||||||||||||||| ||||| |||||||||| ||||||||| ||  |  | |||||||||| ||| | | ||||  |||||||||||    
T  33283276 taatctagtgatgagagagtatgataaaaatgtgttcctcatttgatctaatggtcaaaaaaacctttcccatgatgggataaaactaacctttcccaaa 33283177  T
Q  200 ttaaatgg 207  Q
    ||||||||    
T  33283176 ttaaatgg 33283169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 81 - 151
Target Start/End: Original strand, 3958090 - 3958160
Alignment:
Q  81 tggaagatagtgtaaaaaataatttagtgttgagagagtatgataagaatgtattcctcatttaatctaat 151  Q
    ||||||||||||| || || |||||||||||||||||||||| ||| ||| | ||| ||| ||||||||||    
T  3958090 tggaagatagtgtgaagaaaaatttagtgttgagagagtatgttaaaaatatgttcttcacttaatctaat 3958160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 101 - 211
Target Start/End: Original strand, 16970971 - 16971081
Alignment:
Q  101 aatttagtgttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatcaactttcccatggtggaaaagaactctcctttcccaaat 200  Q
    |||| ||||||||| ||||||||||||| ||||||| |||||  |||||||||  |  |   ||||||||||| ||| ||| ||||   |||||||||||    
T  16970971 aattgagtgttgagggagtatgataagagtgtattcttcattagatctaatggttaaaacttactttcccatgatgggaaaaaactagtctttcccaaat 16971070  T
Q  201 taaatggcacc 211  Q
    |||||||||||    
T  16971071 taaatggcacc 16971081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 163 - 212
Target Start/End: Complemental strand, 13654981 - 13654932
Alignment:
Q  163 actttcccatggtggaaaagaactctcctttcccaaattaaatggcacct 212  Q
    ||||||| ||||||| |||||| ||||||||||||||||||||| |||||    
T  13654981 actttcctatggtgggaaagaagtctcctttcccaaattaaatgtcacct 13654932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 211
Target Start/End: Original strand, 686669 - 686701
Alignment:
Q  179 aaagaactctcctttcccaaattaaatggcacc 211  Q
    |||||||||||||||||||||||||||||||||    
T  686669 aaagaactctcctttcccaaattaaatggcacc 686701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 211
Target Start/End: Complemental strand, 14553715 - 14553667
Alignment:
Q  163 actttcccatggtggaaaagaactctcctttcccaaattaaatggcacc 211  Q
    ||||||||||| |||||||||| | | ||||||||||||||||||||||    
T  14553715 actttcccatgatggaaaagaagtttgctttcccaaattaaatggcacc 14553667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 211
Target Start/End: Original strand, 39950448 - 39950480
Alignment:
Q  179 aaagaactctcctttcccaaattaaatggcacc 211  Q
    |||||||||||||||||||||||||||||||||    
T  39950448 aaagaactctcctttcccaaattaaatggcacc 39950480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 212
Target Start/End: Original strand, 2458353 - 2458403
Alignment:
Q  162 aactttcccatggtggaaaagaactctcctttcccaaattaaatggcacct 212  Q
    |||||| ||||||||||||| || |||| |||||||||||||| |||||||    
T  2458353 aacttttccatggtggaaaaaaagtctcatttcccaaattaaacggcacct 2458403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 151
Target Start/End: Complemental strand, 3739130 - 3739060
Alignment:
Q  81 tggaagatagtgtaaaaaataatttagtgttgagagagtatgataagaatgtattcctcatttaatctaat 151  Q
    ||||||||| ||| || || ||| |||||||||||||||||| ||||||| ||||  ||| ||||||||||    
T  3739130 tggaagatattgtgaagaaaaatctagtgttgagagagtatgttaagaatatatttttcacttaatctaat 3739060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 151
Target Start/End: Original strand, 28075925 - 28075995
Alignment:
Q  81 tggaagatagtgtaaaaaataatttagtgttgagagagtatgataagaatgtattcctcatttaatctaat 151  Q
    ||||||||||||| || || ||| |||||||||||||| ||| ||||||| ||||  ||| ||||||||||    
T  28075925 tggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatatttttcacttaatctaat 28075995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 151
Target Start/End: Original strand, 42408521 - 42408591
Alignment:
Q  81 tggaagatagtgtaaaaaataatttagtgttgagagagtatgataagaatgtattcctcatttaatctaat 151  Q
    ||||||||||||| || || ||| |||||||||||||| ||| ||||||| | ||| ||| ||||||||||    
T  42408521 tggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaat 42408591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 162 - 211
Target Start/End: Original strand, 4608589 - 4608638
Alignment:
Q  162 aactttcccatggtggaaaagaactctcctttcccaaattaaatggcacc 211  Q
    |||||||||||||||| ||| |||  |||||||||| |||||||||||||    
T  4608589 aactttcccatggtgggaaataacattcctttcccagattaaatggcacc 4608638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 132 - 177
Target Start/End: Complemental strand, 33685824 - 33685779
Alignment:
Q  132 tattcctcatttaatctaatggacatgatcaactttcccatggtgg 177  Q
    ||||| |||||||||||||||||||| |||||||||  ||||||||    
T  33685824 tattcttcatttaatctaatggacataatcaacttttacatggtgg 33685779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 165 - 206
Target Start/End: Original strand, 39167442 - 39167483
Alignment:
Q  165 tttcccatggtggaaaagaactctcctttcccaaattaaatg 206  Q
    ||||||||| ||| |||||| |||||||||||||||||||||    
T  39167442 tttcccatgatgggaaagaagtctcctttcccaaattaaatg 39167483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 211
Target Start/End: Complemental strand, 15183812 - 15183780
Alignment:
Q  179 aaagaactctcctttcccaaattaaatggcacc 211  Q
    |||||||||||||||||||||| ||||||||||    
T  15183812 aaagaactctcctttcccaaatcaaatggcacc 15183780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 211
Target Start/End: Complemental strand, 26688214 - 26688166
Alignment:
Q  163 actttcccatggtggaaaagaactctcctttcccaaattaaatggcacc 211  Q
    ||||||||||| ||| |||||| | | ||||||||||||||||||||||    
T  26688214 actttcccatgatgggaaagaagtttgctttcccaaattaaatggcacc 26688166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 211
Target Start/End: Complemental strand, 26957945 - 26957897
Alignment:
Q  163 actttcccatggtggaaaagaactctcctttcccaaattaaatggcacc 211  Q
    ||||||||||| ||| |||||| | | ||||||||||||||||||||||    
T  26957945 actttcccatgatgggaaagaagtttgctttcccaaattaaatggcacc 26957897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 153
Target Start/End: Original strand, 38064835 - 38064891
Alignment:
Q  97 aaataatttagtgttgagagagtatgataagaatgtattcctcatttaatctaatgg 153  Q
    ||||||| |||||||| ||| ||||||||||| |||| || ||| ||||||||||||    
T  38064835 aaataatatagtgttgggagtgtatgataagattgtactcttcaattaatctaatgg 38064891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 115; Significance: 2e-58; HSPs: 54)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 56 - 197
Target Start/End: Complemental strand, 6076127 - 6075988
Alignment:
Q  56 gtgtgagaacatgaaagagagagggtggaagatagtgtaaaaaataatttagtgttgagagagtatgataagaatgtattcctcatttaatctaatggac 155  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  6076127 gtgtgagaacatgaaagagagag--tggaagatagtgtaaaaaataatttagtgttgagagactatgataaaaatgtattcctcatttaatctaatggac 6076030  T
Q  156 atgatcaactttcccatggtggaaaagaactctcctttccca 197  Q
    ||||||||||||| |||||| |||||||||||||||||||||    
T  6076029 atgatcaactttctcatggtagaaaagaactctcctttccca 6075988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 64 - 211
Target Start/End: Complemental strand, 193997 - 193850
Alignment:
Q  64 acatgaaagagagagggtggaagatagtgtaaaaaataatttagtgttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatcaa 163  Q
    |||||||||||||| | || |||||| | ||||||||||| |||||| ||||||||||||||||||| | ||||||||||||| ||||||||||||| ||    
T  193997 acatgaaagagagatgatgaaagataatataaaaaataatctagtgtggagagagtatgataagaatatgttcctcatttaatttaatggacatgattaa 193898  T
Q  164 ctttcccatggtggaaaagaactctcctttcccaaattaaatggcacc 211  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||||    
T  193897 ctttctcatggtgggaaagaactctcctttcccaaattaaatggcacc 193850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 64 - 211
Target Start/End: Complemental strand, 16270357 - 16270207
Alignment:
Q  64 acatgaaagagagagggtggaagatagtgtaaaaaa--taatttagtg-ttgagagagtatgataagaatgtattcctcatttaatctaatggacatgat 160  Q
    ||||||||||| ||| ||| |||||||| |||||||  |||| ||||| |||||||||||||||| |||| | |||||||||||||||||||||||||||    
T  16270357 acatgaaagagggagtgtgaaagatagtataaaaaaaataatctagtggttgagagagtatgataggaatatgttcctcatttaatctaatggacatgat 16270258  T
Q  161 caactttcccatggtggaaaagaactctcctttcccaaattaaatggcacc 211  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  16270257 caactttcccatggtgggaaagaactctcctttcccaaattaaatggcacc 16270207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 94 - 211
Target Start/End: Original strand, 23440795 - 23440913
Alignment:
Q  94 aaaaaataatttagtg-ttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatcaactttcccatggtggaaaagaactctcctt 192  Q
    |||||||||| ||||| |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  23440795 aaaaaataatctagtggttgagagagtatgataggaatatattcctcatttaatctaatggacatgatcaactttcccatggtgggaaagaactctcctt 23440894  T
Q  193 tcccaaattaaatggcacc 211  Q
    |||||||||||||||||||    
T  23440895 tcccaaattaaatggcacc 23440913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 64 - 211
Target Start/End: Complemental strand, 43737878 - 43737729
Alignment:
Q  64 acatgaaagagagagggtggaagatagtgtaaaaaa-taatttagtg-ttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatc 161  Q
    |||| |||||||||  ||| |||||||||||||||| |||| ||||| ||||||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  43737878 acatcaaagagagaatgtgaaagatagtgtaaaaaaataatctagtggttgagagagtatgataaaaatatattcctcatttaatctaatggacatgatc 43737779  T
Q  162 aactttcccatggtggaaaagaactctcctttcccaaattaaatggcacc 211  Q
    |||||||||||||||| ||| |||||| ||||||||||||||||||||||    
T  43737778 aactttcccatggtgggaaataactctactttcccaaattaaatggcacc 43737729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 66 - 212
Target Start/End: Original strand, 48972346 - 48972494
Alignment:
Q  66 atgaaagagagagggtggaagatagtgtaaaaaa-taatttagtg-ttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatcaa 163  Q
    ||||||||||||| ||| |||||||| ||||||| |||| ||||| |||||||||||||||| |||| | || |||||||||||||||||||||||||||    
T  48972346 atgaaagagagagtgtgaaagatagtataaaaaaataatctagtggttgagagagtatgataggaatatgtttctcatttaatctaatggacatgatcaa 48972445  T
Q  164 ctttcccatggtggaaaagaactctcctttcccaaattaaatggcacct 212  Q
    |||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  48972446 cttttccatggtgggaaagaactctcctttcccaaattaaatggcacct 48972494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 64 - 212
Target Start/End: Complemental strand, 51974586 - 51974436
Alignment:
Q  64 acatgaaagagagagggtggaagatagtgtaaaaaa-taatttagt-gttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatc 161  Q
    ||||||||||||||  ||| |||||||| ||||||| |||| |||| ||||||||||||||||| |||| | ||| |||||||||||||| |||||||||    
T  51974586 acatgaaagagagaatgtgaaagatagtataaaaaaataatctagtagttgagagagtatgataggaatatgttcttcatttaatctaatagacatgatc 51974487  T
Q  162 aactttcccatggtggaaaagaactctcctttcccaaattaaatggcacct 212  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  51974486 aactttcccatggtgggaaagaactctcctttcccaaattaaatggcacct 51974436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 64 - 211
Target Start/End: Original strand, 51975126 - 51975275
Alignment:
Q  64 acatgaaagagagagggtggaagatagtgtaaaaaa-taatttagtg-ttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatc 161  Q
    ||||||||||||||| ||| |||||||| ||||||| |||| ||||| || ||||||||||||| |||| | |||||||||||||||||| |||||||||    
T  51975126 acatgaaagagagagtgtgaaagatagtataaaaaaataatctagtggttaagagagtatgataggaatatgttcctcatttaatctaattgacatgatc 51975225  T
Q  162 aactttcccatggtggaaaagaactctcctttcccaaattaaatggcacc 211  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  51975226 aactttcccatagtgaaaaagaactctcctttcccaaattaaatggcacc 51975275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 84 - 211
Target Start/End: Original strand, 9948807 - 9948935
Alignment:
Q  84 aagatagtgtaaaaaataatttagtg-ttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatcaactttcccatggtggaaaag 182  Q
    |||||||| ||||||||||| ||||| |||| ||||||||||| |||| | |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  9948807 aagatagtataaaaaataatctagtggttgatagagtatgataggaatatgttcctcatttaatctaatggacatgatcaactttcccatggtgggaaag 9948906  T
Q  183 aactctcctttcccaaattaaatggcacc 211  Q
    ||||||||||||| |||||||||||||||    
T  9948907 aactctcctttcctaaattaaatggcacc 9948935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 64 - 211
Target Start/End: Complemental strand, 23440765 - 23440617
Alignment:
Q  64 acatgaaagagagagggtggaagatagtgtaaaaaataatttagtg-ttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatca 162  Q
    ||||||||||||||| ||| |||||||| ||||||||||| ||||| |||||||||||||||| |||| | || ||||||||||||||||||||| ||||    
T  23440765 acatgaaagagagagtgtgaaagatagtataaaaaataatctagtggttgagagagtatgataggaatatgtttctcatttaatctaatggacataatca 23440666  T
Q  163 actttcccatggtggaaaagaactctcctttcccaaattaaatggcacc 211  Q
    ||||| |||| || | |||||||||||||||||||||||||||||||||    
T  23440665 acttttccatagttggaaagaactctcctttcccaaattaaatggcacc 23440617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 64 - 187
Target Start/End: Complemental strand, 12926020 - 12925897
Alignment:
Q  64 acatgaaagagagagggtggaagatagtgtaaaaaataatttagtgttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatcaa 163  Q
    |||||||||||||||||||||||||||||||||||||||| || |||||||||||||  ||||||||||||||| ||||||||||||||||||| |||||    
T  12926020 acatgaaagagagagggtggaagatagtgtaaaaaataatctaatgttgagagagtagtataagaatgtattccacatttaatctaatggacattatcaa 12925921  T
Q  164 ctttcccatggtggaaaagaactc 187  Q
    |||| | ||||||||||| |||||    
T  12925920 cttttctatggtggaaaaaaactc 12925897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 64 - 211
Target Start/End: Original strand, 16271047 - 16271196
Alignment:
Q  64 acatgaaagagagagggtggaagatagtgtaaaaaa-taatttagtg-ttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatc 161  Q
    ||||||||||||||| ||| || ||||| ||||||| |||| ||||| |||||||||||||||| |||| | ||||||||||||||||||||||||||||    
T  16271047 acatgaaagagagagtgtgaaatatagtataaaaaaataatctagtggttgagagagtatgataggaatatgttcctcatttaatctaatggacatgatc 16271146  T
Q  162 aactttcccatggtggaaaagaactctcctttcccaaattaaatggcacc 211  Q
    |||||||||||| ||  ||||||||||||||||| |||||||||||||||    
T  16271147 aactttcccatgatgagaaagaactctcctttcctaaattaaatggcacc 16271196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 56 - 211
Target Start/End: Complemental strand, 38930469 - 38930312
Alignment:
Q  56 gtgtgagaacatgaaagagagagggtggaagatagtgtaaaaaa-taatttagtg-ttgagagagtatgataagaatgtattcctcatttaatctaatgg 153  Q
    ||||| ||||||||||||||||| ||| |||||||| ||||||| |||| ||||| |||||||||||||||| |||| | ||||| ||||||| ||||||    
T  38930469 gtgtgggaacatgaaagagagagtgtgaaagatagtataaaaaaataatctagtggttgagagagtatgataggaatatgttccttatttaatttaatgg 38930370  T
Q  154 acatgatcaactttcccatggtggaaaagaactctcctttcccaaattaaatggcacc 211  Q
    | ||||||||||||||||||||| ||||||||| ||||||||||||||||||| ||||    
T  38930369 atatgatcaactttcccatggtgaaaaagaactttcctttcccaaattaaatgacacc 38930312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 94 - 212
Target Start/End: Original strand, 43737908 - 43738027
Alignment:
Q  94 aaaaaataatttagtg-ttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatcaactttcccatggtggaaaagaactctcctt 192  Q
    |||||||||| ||||| |||||||| ||||||| |||| | |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  43737908 aaaaaataatctagtggttgagagaatatgataggaatatgttcctcatttaatctaatggacatgatcaactttcccatgatgggaaagaactctcctt 43738007  T
Q  193 tcccaaattaaatggcacct 212  Q
    ||||||||||||||||||||    
T  43738008 tcccaaattaaatggcacct 43738027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 66 - 211
Target Start/End: Original strand, 50826992 - 50827138
Alignment:
Q  66 atgaaagagagagggtggaagatagtgtaaaaaa-taatttagtg-ttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatcaa 163  Q
    ||||||||||||| ||| |||||| | ||||||| |||||||||| ||||||||||||||||| ||| | || |||||||||||||||||||||||||||    
T  50826992 atgaaagagagagtgtgaaagatactataaaaaaataatttagtggttgagagagtatgataaaaatatgtttctcatttaatctaatggacatgatcaa 50827091  T
Q  164 ctttcccatggtggaaaagaactctcctttcccaaattaaatggcacc 211  Q
    |||||||||||||| ||| |||||||||||| ||||||||||||||||    
T  50827092 ctttcccatggtgggaaa-aactctcctttctcaaattaaatggcacc 50827138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 64 - 211
Target Start/End: Complemental strand, 9948144 - 9947995
Alignment:
Q  64 acatgaaagagagagggtggaagatagtgtaaaaaa-taatttagtg-ttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatc 161  Q
    ||||||||||||||| ||| |||||||| ||||||| |||| ||||| |||||||||||||||| |||| | ||||||||||||||||||| | ||||||    
T  9948144 acatgaaagagagagtgtgaaagatagtataaaaaaataatctagtggttgagagagtatgataggaatatgttcctcatttaatctaatgaatatgatc 9948045  T
Q  162 aactttcccatggtggaaaagaactctcctttcccaaattaaatggcacc 211  Q
    |||||| ||||||||| |||||||| | ||||||||||||||||||||||    
T  9948044 aacttttccatggtgggaaagaacttttctttcccaaattaaatggcacc 9947995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 56 - 211
Target Start/End: Complemental strand, 48971862 - 48971705
Alignment:
Q  56 gtgtgagaacatgaaagagagagggtggaagatagtgtaaaaaa-taatttagtg-ttgagagagtatgataagaatgtattcctcatttaatctaatgg 153  Q
    ||||| ||||||||||||||||| ||| |||||||| ||||||| |||| ||||| |||||||||||||||| |||| | ||||||||||||||||||      
T  48971862 gtgtgggaacatgaaagagagagtgtgaaagatagtataaaaaaataatatagtggttgagagagtatgataggaatatgttcctcatttaatctaattt 48971763  T
Q  154 acatgatcaactttcccatggtggaaaagaactctcctttcccaaattaaatggcacc 211  Q
    | ||||||||||||| ||| |||| |||||||||||||||||||||||||||| ||||    
T  48971762 atatgatcaactttctcattgtgggaaagaactctcctttcccaaattaaatgacacc 48971705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 64 - 187
Target Start/End: Complemental strand, 20794436 - 20794313
Alignment:
Q  64 acatgaaagagagagggtggaagatagtgtaaaaaataatttagtgttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatcaa 163  Q
    |||||||||||||||||||||| ||||||||||||||||| || ||||||||||||   |||||||||| |||| |||||||||||||| |||| |||||    
T  20794436 acatgaaagagagagggtggaaaatagtgtaaaaaataatctaatgttgagagagtgatataagaatgtgttccacatttaatctaatgcacattatcaa 20794337  T
Q  164 ctttcccatggtggaaaagaactc 187  Q
    |||||| ||||||||||| |||||    
T  20794336 ctttcctatggtggaaaaaaactc 20794313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 64 - 193
Target Start/End: Complemental strand, 47334347 - 47334217
Alignment:
Q  64 acatgaaagagagagggtggaagatagtgtaaaa-aataatttagtgttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatca 162  Q
    |||||||||||||| ||||||||||||||||||| |||||| |||||||||||||||| |||||| || | || ||||||||||||||||||||| ||||    
T  47334347 acatgaaagagagatggtggaagatagtgtaaaacaataatctagtgttgagagagtaggataaggatttgtttctcatttaatctaatggacataatca 47334248  T
Q  163 actttcccatggtggaaaagaactctccttt 193  Q
    |||||||||| |||| ||| ||||| |||||    
T  47334247 actttcccattgtgggaaacaactccccttt 47334217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 64 - 187
Target Start/End: Original strand, 31390726 - 31390847
Alignment:
Q  64 acatgaaagagagagggtggaagatagtgtaaaaaataatttagtgttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatcaa 163  Q
    |||||||||||||||  || |||||||||||||||||||| || ||||||||||||| ||||| ||||| ||||||||||| || ||||||||| |||||    
T  31390726 acatgaaagagagag--tgaaagatagtgtaaaaaataatctaatgttgagagagtaggataaaaatgtgttcctcatttattccaatggacataatcaa 31390823  T
Q  164 ctttcccatggtggaaaagaactc 187  Q
    |||||||||||||| |||||||||    
T  31390824 ctttcccatggtgggaaagaactc 31390847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 64 - 197
Target Start/End: Original strand, 6076767 - 6076901
Alignment:
Q  64 acatgaaagagagagggtggaagatagtgtaaaaaataatttagtg-ttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatca 162  Q
    ||||||||||||||| ||| |||||||| ||||||||||| || || |||||||||||||||| |||| | || |||||||||| |||||||||||||||    
T  6076767 acatgaaagagagagtgtgaaagatagtataaaaaataatctattggttgagagagtatgataggaatatgttactcatttaatataatggacatgatca 6076866  T
Q  163 actttcccatggtggaaaagaactctcctttccca 197  Q
    ||||| |||| |||| ||||||||||| |||||||    
T  6076867 acttttccatagtgggaaagaactctcatttccca 6076901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 64 - 181
Target Start/End: Complemental strand, 17050600 - 17050483
Alignment:
Q  64 acatgaaagagagagggtggaagatagtgtaaaaaataatttagtgttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatcaa 163  Q
    |||||||||||||||||||||||||||||||||||||||| || | |||||||||||  |||||||||| | ||  ||||||||||||| |||| |||||    
T  17050600 acatgaaagagagagggtggaagatagtgtaaaaaataatctaatattgagagagtagtataagaatgtgtaccatatttaatctaatgaacattatcaa 17050501  T
Q  164 ctttcccatggtggaaaa 181  Q
    ||||||||||||| ||||    
T  17050500 ctttcccatggtgaaaaa 17050483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 64 - 209
Target Start/End: Original strand, 38931145 - 38931293
Alignment:
Q  64 acatgaaagagagagggtggaagatagtgtaaaaaa--taatttagtg-ttgagagagtatgataagaatgtattcctcatttaatctaatggacatgat 160  Q
    ||||||||||||||| ||| |||||| | |||||||  |||| ||||| ||||||||||||||||  ||| | || || ||||||| ||||||| |||||    
T  38931145 acatgaaagagagagtgtgaaagataatataaaaaaaataatatagtggttgagagagtatgatagaaatatgtttcttatttaatttaatggatatgat 38931244  T
Q  161 caactttcccatggtggaaaagaactctcctttcccaaattaaatggca 209  Q
    ||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  38931245 caactttcccatggtagaaaagaactcttctttcccaaattaaatggca 38931293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 63 - 211
Target Start/End: Original strand, 47334798 - 47334948
Alignment:
Q  63 aacatgaaagagagagggtggaagatagtgtaaaa-aataatttagtgt-tgagagagtatgataagaatgtattcctcatttaatctaatggacatgat 160  Q
    |||| |||||||||| ||||||||||||||||||| ||  || |||||| |||||||||| |||||  || | || ||||||||||| ||||||||| ||    
T  47334798 aacaagaaagagagatggtggaagatagtgtaaaacaacgatatagtgtatgagagagtaggataaagatttgttactcatttaatccaatggacataat 47334897  T
Q  161 caactttcccatggtggaaaagaactctcctttcccaaattaaatggcacc 211  Q
    ||||||||| ||||||| ||| ||||| | ||||||| | |||||| ||||    
T  47334898 caactttcctatggtgggaaacaactcccttttcccatactaaatgccacc 47334948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 117 - 182
Target Start/End: Complemental strand, 27888765 - 27888700
Alignment:
Q  117 agtatgataagaatgtattcctcatttaatctaatggacatgatcaactttcccatggtggaaaag 182  Q
    ||||||||| |||| | |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  27888765 agtatgataggaatatgttcctcatttaatctaatggacatgatcaactttcccatggtgggaaag 27888700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 6076686 - 6076636
Alignment:
Q  1 tggttgctgccggaaaacttgttaacgtaccattttcaaggatcaaacaaa 51  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  6076686 tggttgctgccggaaaacttgttaatgtaccattttcaaggatcaaacaaa 6076636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 112 - 181
Target Start/End: Original strand, 40649516 - 40649585
Alignment:
Q  112 gagagagtatgataagaatgtattcctcatttaatctaatggacatgatcaactttcccatggtggaaaa 181  Q
    |||||||||  |||||||||| |||| ||||||||||||||||||| |||||||||||||||||| ||||    
T  40649516 gagagagtagtataagaatgtgttccacatttaatctaatggacattatcaactttcccatggtgaaaaa 40649585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 97 - 177
Target Start/End: Complemental strand, 46133807 - 46133727
Alignment:
Q  97 aaataatttagtgttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatcaactttcccatggtgg 177  Q
    ||||||| || |||||||||||||  ||||||||||  |||||||||||||| |||||||| ||  |||||||||||||||    
T  46133807 aaataatctaatgttgagagagtagtataagaatgtgctcctcatttaatctgatggacataattcactttcccatggtgg 46133727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 163 - 211
Target Start/End: Original strand, 51988464 - 51988512
Alignment:
Q  163 actttcccatggtggaaaagaactctcctttcccaaattaaatggcacc 211  Q
    |||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  51988464 actttcccatggtggaaaagaagtctcctttcccaaattaaatgccacc 51988512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 163 - 212
Target Start/End: Complemental strand, 51987875 - 51987826
Alignment:
Q  163 actttcccatggtggaaaagaactctcctttcccaaattaaatggcacct 212  Q
    ||||||||||||||| |||||| ||||||||||||||||||||| |||||    
T  51987875 actttcccatggtgggaaagaagtctcctttcccaaattaaatgccacct 51987826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 165 - 213
Target Start/End: Complemental strand, 48869815 - 48869767
Alignment:
Q  165 tttcccatggtggaaaagaactctcctttcccaaattaaatggcacctc 213  Q
    |||||||||||||||||||| ||||||||||||| ||||||| ||||||    
T  48869815 tttcccatggtggaaaagaagtctcctttcccaagttaaatgtcacctc 48869767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 72 - 211
Target Start/End: Original strand, 194610 - 194749
Alignment:
Q  72 gagagagggtggaagatagtgtaaaaaataatttagtgttgagagagtatgataagaat--gtattcctcatttaatctaatggacatgatcaactttcc 169  Q
    |||||||| || |||||||| ||||||||||| |||||| |||| |||||||||| |||   | |||||| || ||||||||||    |||  |||||||    
T  194610 gagagaggatgaaagatagtataaaaaataatctagtgtagagatagtatgataa-aatcaatgttcctc-ttgaatctaatggttgagatttactttcc 194707  T
Q  170 catggtggaaaagaactctcctttcccaaattaaatggcacc 211  Q
    |||| ||| |||||| | | ||||||||||||||||||||||    
T  194708 catgatgggaaagaagtttgctttcccaaattaaatggcacc 194749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 162 - 212
Target Start/End: Complemental strand, 1012596 - 1012546
Alignment:
Q  162 aactttcccatggtggaaaagaactctcctttcccaaattaaatggcacct 212  Q
    |||||||||||||||| ||| || ||||||||||||||||||| |||||||    
T  1012596 aactttcccatggtgggaaaaaaatctcctttcccaaattaaacggcacct 1012546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 162 - 212
Target Start/End: Original strand, 1013471 - 1013521
Alignment:
Q  162 aactttcccatggtggaaaagaactctcctttcccaaattaaatggcacct 212  Q
    |||||||||||||||||||| |||  ||||||||||||||||||| |||||    
T  1013471 aactttcccatggtggaaaataacattcctttcccaaattaaatgacacct 1013521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 81 - 151
Target Start/End: Complemental strand, 7219138 - 7219068
Alignment:
Q  81 tggaagatagtgtaaaaaataatttagtgttgagagagtatgataagaatgtattcctcatttaatctaat 151  Q
    ||||||||||||| || || ||| ||||||||||| || ||| ||||||| ||||| ||||||||||||||    
T  7219138 tggaagatagtgtgaagaaaaatctagtgttgagaaagcatgttaagaatatattcttcatttaatctaat 7219068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 64 - 153
Target Start/End: Complemental strand, 27418311 - 27418221
Alignment:
Q  64 acatgaaagagagagggtggaagatagtgtaaaaaataatttagtgtt-gagagagtatgataagaatgtattcctcatttaatctaatgg 153  Q
    ||||||||||||||   |||||||||||||| |||||||| ||||||| |||||||||| | |||| |||  || |||||| |||||||||    
T  27418311 acatgaaagagagattatggaagatagtgtataaaataatatagtgttcgagagagtataacaagagtgtgctcttcatttgatctaatgg 27418221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 81 - 151
Target Start/End: Complemental strand, 51247958 - 51247888
Alignment:
Q  81 tggaagatagtgtaaaaaataatttagtgttgagagagtatgataagaatgtattcctcatttaatctaat 151  Q
    ||||||||||||| || || ||| |||||||||||||| ||| ||||||| ||||| ||| ||||||||||    
T  51247958 tggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatattcttcacttaatctaat 51247888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 81 - 151
Target Start/End: Original strand, 51248439 - 51248509
Alignment:
Q  81 tggaagatagtgtaaaaaataatttagtgttgagagagtatgataagaatgtattcctcatttaatctaat 151  Q
    ||||||||||||| || || ||| |||||||||||||||||| ||||||| | ||| ||| ||||||||||    
T  51248439 tggaagatagtgtgaagaaaaatctagtgttgagagagtatgttaagaatatgttcttcacttaatctaat 51248509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 95 - 181
Target Start/End: Original strand, 51977130 - 51977216
Alignment:
Q  95 aaaaataatttagtgttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatcaactttcccatggtggaaaa 181  Q
    |||||||||||| ||||||| ||| || |||| ||||||||| | |||  |||| |||| ||||| |||||||||||| ||||||||    
T  51977130 aaaaataatttaatgttgagggagcataataaaaatgtattcttaattagatctgatggtcatgaacaactttcccatagtggaaaa 51977216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 73 - 130
Target Start/End: Complemental strand, 13536418 - 13536362
Alignment:
Q  73 agagagggtggaagatagtgtaaaaaataatttagtgttgagagagtatgataagaat 130  Q
    |||||||| |||||||||||||||||||||| |||| ||||  |||||||||||||||    
T  13536418 agagaggg-ggaagatagtgtaaaaaataatatagtattgatggagtatgataagaat 13536362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 163 - 212
Target Start/End: Original strand, 35616775 - 35616824
Alignment:
Q  163 actttcccatggtggaaaagaactctcctttcccaaattaaatggcacct 212  Q
    ||||||||||||||| |||||| ||||||||||||| ||||||| |||||    
T  35616775 actttcccatggtgggaaagaagtctcctttcccaagttaaatgccacct 35616824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 211
Target Start/End: Complemental strand, 8560887 - 8560839
Alignment:
Q  163 actttcccatggtggaaaagaactctcctttcccaaattaaatggcacc 211  Q
    ||||||||||| ||| |||||| ||||||||||||||||||||| ||||    
T  8560887 actttcccatgatgggaaagaagtctcctttcccaaattaaatgtcacc 8560839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 211
Target Start/End: Complemental strand, 16270933 - 16270901
Alignment:
Q  179 aaagaactctcctttcccaaattaaatggcacc 211  Q
    |||||||||||||||||||||||||||||||||    
T  16270933 aaagaactctcctttcccaaattaaatggcacc 16270901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 211
Target Start/End: Original strand, 38930576 - 38930608
Alignment:
Q  179 aaagaactctcctttcccaaattaaatggcacc 211  Q
    |||||||||||||||||||||||||||||||||    
T  38930576 aaagaactctcctttcccaaattaaatggcacc 38930608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 153
Target Start/End: Original strand, 27420214 - 27420282
Alignment:
Q  83 gaagatagtgtaaaaaataatttagtgttgagagagtatgataagaatgtattcctcatttaatctaatgg 153  Q
    ||||||||||| |||||  || ||||||| |||||||||||| | ||||| |||||||||| |||||||||    
T  27420214 gaagatagtgtgaaaaa--atctagtgtttagagagtatgattaaaatgtgttcctcatttgatctaatgg 27420282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 81 - 152
Target Start/End: Complemental strand, 37725509 - 37725438
Alignment:
Q  81 tggaagatagtgtaaaaaataatttagtgttgagagagtatgataagaatgtattcctcatttaatctaatg 152  Q
    ||||| ||||||| || || ||| |||||||||||||||||| ||||||| | ||| ||| |||||||||||    
T  37725509 tggaaaatagtgtgaagaaaaatctagtgttgagagagtatgttaagaatatgttcttcacttaatctaatg 37725438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 177
Target Start/End: Complemental strand, 41465357 - 41465270
Alignment:
Q  90 gtgtaaaaaataatttagtgttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatcaactttcccatggtgg 177  Q
    |||||||| | ||| ||||||  ||||||||| |||||||||||||||| |||| ||||||  | ||  || ||||||||||||||||    
T  41465357 gtgtaaaagaaaatctagtgtgaagagagtattataagaatgtattcctgatttgatctaaatgtcaaaataaactttcccatggtgg 41465270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 151
Target Start/End: Original strand, 41563748 - 41563818
Alignment:
Q  81 tggaagatagtgtaaaaaataatttagtgttgagagagtatgataagaatgtattcctcatttaatctaat 151  Q
    ||||||||||||| || || ||| |||||||||||||| ||| ||||||| | ||| ||| ||||||||||    
T  41563748 tggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaat 41563818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 151
Target Start/End: Complemental strand, 49533873 - 49533803
Alignment:
Q  81 tggaagatagtgtaaaaaataatttagtgttgagagagtatgataagaatgtattcctcatttaatctaat 151  Q
    ||||||||||||| || || ||| |||||||||||||| ||| ||||||| | ||| ||| ||||||||||    
T  49533873 tggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaat 49533803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 153
Target Start/End: Complemental strand, 50267678 - 50267620
Alignment:
Q  95 aaaaataatttagtgttgagagagtatgataagaatgtattcctcatttaatctaatgg 153  Q
    ||||||||| |||||| |||||| |||||||||||| || || |||||| |||||||||    
T  50267678 aaaaataatatagtgtggagagaatatgataagaatatagtcttcatttgatctaatgg 50267620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 107 - 212
Target Start/End: Original strand, 11032163 - 11032268
Alignment:
Q  107 gtgttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatcaactttcccatggtggaaaagaactctcctttcccaaattaaatg 206  Q
    ||||||||||   ||||||||||||| ||| | | |||||||||||| ||   |||||||||||||||||| |||  | || |||||||||  |||||||    
T  11032163 gtgttgagagtccatgataagaatgtgttcattacttaatctaatggtcaaattcaactttcccatggtgggaaactattcccctttcccatgttaaatg 11032262  T
Q  207 gcacct 212  Q
     |||||    
T  11032263 ccacct 11032268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 82 - 181
Target Start/End: Original strand, 42645960 - 42646056
Alignment:
Q  82 ggaagatagtgtaaaaaataatttagtgttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatcaactttcccatggtggaaaa 181  Q
    |||||||||||| ||||||   | ||||||||||||  ||||||||| |||| || | |||||||| |||||  | |||||||||||||||  |||||||    
T  42645960 ggaagatagtgtgaaaaat---tcagtgttgagagaacatgataagagtgtactctttatttaatcaaatggctaagatcaactttcccattatggaaaa 42646056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 211
Target Start/End: Complemental strand, 37874112 - 37874064
Alignment:
Q  163 actttcccatggtggaaaagaactctcctttcccaaattaaatggcacc 211  Q
    ||||||||||||||| |||||| |||| |||||||| ||||||| ||||    
T  37874112 actttcccatggtgggaaagaagtctcatttcccaagttaaatgtcacc 37874064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 211
Target Start/End: Complemental strand, 51975011 - 51974979
Alignment:
Q  179 aaagaactctcctttcccaaattaaatggcacc 211  Q
    ||||||| |||||||||||||||||||||||||    
T  51975011 aaagaaccctcctttcccaaattaaatggcacc 51974979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 106; Significance: 4e-53; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 56 - 211
Target Start/End: Original strand, 33480519 - 33480676
Alignment:
Q  56 gtgtgagaacatgaaagagagagggtggaagatagtgtaaaaaa-taatttagtg-ttgagagagtatgataagaatgtattcctcatttaatctaatgg 153  Q
    ||||| ||||||||||||||||| ||| |||||||| ||||||| |||| ||||| |||||||||||||||| |||| | ||||||||||||||||||||    
T  33480519 gtgtgggaacatgaaagagagagtgtgaaagatagtataaaaaaataatctagtggttgagagagtatgataggaatatgttcctcatttaatctaatgg 33480618  T
Q  154 acatgatcaactttcccatggtggaaaagaactctcctttcccaaattaaatggcacc 211  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  33480619 acatgatcaactttcccatggtgggaaagaactctcctttcccaaattaaatggcacc 33480676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 64 - 211
Target Start/End: Complemental strand, 22580084 - 22579935
Alignment:
Q  64 acatgaaagagagagggtggaagatagtgtaaaaaa-taatttagtg-ttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatc 161  Q
    ||||||||||||||| ||| |||||||| ||||||| |||| ||||| |||||||||||||||| |||| | ||||||||||||||||||||| ||||||    
T  22580084 acatgaaagagagagtgtgaaagatagtataaaaaaataatctagtgattgagagagtatgataggaatatgttcctcatttaatctaatggatatgatc 22579985  T
Q  162 aactttcccatggtggaaaagaactctcctttcccaaattaaatggcacc 211  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22579984 aactttcccatggtggaaaagaactctcctttcccaaattaaatggcacc 22579935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 64 - 206
Target Start/End: Complemental strand, 15082546 - 15082402
Alignment:
Q  64 acatgaaagagagagggtggaagatagtgtaaaaaa-taatttagtg-ttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatc 161  Q
    ||||||||||||||| ||| |||||||| ||||||| |||| ||||| |||||||||||||||| |||| | ||||||||||||||||||||||||||||    
T  15082546 acatgaaagagagagtgtgaaagatagtataaaaaaataatctagtggttgagagagtatgataggaatatgttcctcatttaatctaatggacatgatc 15082447  T
Q  162 aactttcccatggtggaaaagaactctcctttcccaaattaaatg 206  Q
    |||||||||||| ||||||||||||||| ||||||||||||||||    
T  15082446 aactttcccatgatggaaaagaactctcatttcccaaattaaatg 15082402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 64 - 209
Target Start/End: Complemental strand, 3542963 - 3542816
Alignment:
Q  64 acatgaaagagagagggtggaagatagtgtaaaaaa-taatttagtg-ttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatc 161  Q
    ||||||||||||||| ||| |||||||| ||||||| |||| ||||| |||||||||||||||| |||| | ||||||||||||||||||| ||||||||    
T  3542963 acatgaaagagagagtgtgaaagatagtttaaaaaaataatctagtggttgagagagtatgataggaatatgttcctcatttaatctaatgaacatgatc 3542864  T
Q  162 aactttcccatggtggaaaagaactctcctttcccaaattaaatggca 209  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||||    
T  3542863 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggca 3542816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 64 - 211
Target Start/End: Original strand, 15083217 - 15083366
Alignment:
Q  64 acatgaaagagagagggtggaagatagtgtaaaaaa-taatttagtg-ttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatc 161  Q
    ||||||||||||||| ||| |||||||| ||||||| |||| ||||| |||||||||||||||| |||| | |||||||||||||||||| || ||||||    
T  15083217 acatgaaagagagagtgtgaaagatagtataaaaaaataatctagtggttgagagagtatgataggaatatgttcctcatttaatctaatagatatgatc 15083316  T
Q  162 aactttcccatggtggaaaagaactctcctttcccaaattaaatggcacc 211  Q
    ||||||| |||||||| |||||||||||||||||||||||||||||||||    
T  15083317 aactttctcatggtgggaaagaactctcctttcccaaattaaatggcacc 15083366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 64 - 211
Target Start/End: Complemental strand, 33018316 - 33018167
Alignment:
Q  64 acatgaaagagagagggtggaagatagtgtaaaaaa-taatttagtg-ttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatc 161  Q
    ||||||||||||||| ||| |||||||| ||||||| |||| || || ||||||||||||||||| ||| | ||||||||||||||||||||||||||||    
T  33018316 acatgaaagagagagtgtgaaagatagtataaaaaaataatctaatggttgagagagtatgataaaaatatgttcctcatttaatctaatggacatgatc 33018217  T
Q  162 aactttcccatggtggaaaagaactctcctttcccaaattaaatggcacc 211  Q
    |||||||| ||| ||| |||||||||||||||||||||||||||||||||    
T  33018216 aactttccaatgatgggaaagaactctcctttcccaaattaaatggcacc 33018167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 109 - 212
Target Start/End: Complemental strand, 7193440 - 7193337
Alignment:
Q  109 gttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatcaactttcccatggtggaaaagaactctcctttcccaaattaaatggc 208  Q
    |||||||||||||||||||||| | ||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  7193440 gttgagagagtatgataagaatatgttcctcatttaatctaatggagatgatcaactttcccatggtgggaaagaactctcctttcccaaattaaatggc 7193341  T
Q  209 acct 212  Q
    ||||    
T  7193340 acct 7193337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 94 - 211
Target Start/End: Original strand, 3542993 - 3543111
Alignment:
Q  94 aaaaaataatttagtg-ttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatcaactttcccatggtggaaaagaactctcctt 192  Q
    |||||||||| ||||| |||||||||||||||| |||| | |||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  3542993 aaaaaataatctagtggttgagagagtatgataggaatatgttcctcatttaatctaatggacatgatcaactttcccatggtgggaaaaaactctcctt 3543092  T
Q  193 tcccaaattaaatggcacc 211  Q
    |||||||||||||||||||    
T  3543093 tcccaaattaaatggcacc 3543111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 64 - 209
Target Start/End: Complemental strand, 33479846 - 33479698
Alignment:
Q  64 acatgaaagagagagggtggaagatagtgtaaaaaa--taatttagtg-ttgagagagtatgataagaatgtattcctcatttaatctaatggacatgat 160  Q
    |||||||| |||||| ||| |||||||| |||||||  |||| ||||| ||||||||||||||||  ||| | |||||||||||||||||||||||||||    
T  33479846 acatgaaatagagagtgtgaaagatagtataaaaaaaataatctagtggttgagagagtatgatagaaatatgttcctcatttaatctaatggacatgat 33479747  T
Q  161 caactttcccatggtggaaaagaactctcctttcccaaattaaatggca 209  Q
    ||||||||||||||||| ||| |||||||||||||||||||||||||||    
T  33479746 caactttcccatggtgggaaataactctcctttcccaaattaaatggca 33479698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 68 - 207
Target Start/End: Original strand, 22587213 - 22587354
Alignment:
Q  68 gaaagagagagggtggaagatagtgtaaaaaa-taatttagtg-ttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatcaact 165  Q
    ||||||||||| ||| |||||||| ||||||| |||| ||||| ||||| |||||| |||  ||| | ||||||||||||||||||||||||||||||||    
T  22587213 gaaagagagagtgtgaaagatagtataaaaaaataatctagtgattgagtgagtataatagaaatatgttcctcatttaatctaatggacatgatcaact 22587312  T
Q  166 ttcccatggtggaaaagaactctcctttcccaaattaaatgg 207  Q
    |||||||||||| |||||||||||||||||||||||||||||    
T  22587313 ttcccatggtgggaaagaactctcctttcccaaattaaatgg 22587354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 94 - 214
Target Start/End: Original strand, 33018346 - 33018467
Alignment:
Q  94 aaaaaataatttagtg-ttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatcaactttcccatggtggaaaagaactctcctt 192  Q
    |||||||||| ||||| ||||||||||||||||  ||| | |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  33018346 aaaaaataatctagtggttgagagagtatgatagaaatatgttcctcatttaatctaatggacatgatcaactttcccatggtgggaaagaactctcctt 33018445  T
Q  193 tcccaaattaaatggcacctca 214  Q
    |||||||||||| | |||||||    
T  33018446 tcccaaattaaacgacacctca 33018467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 94 - 212
Target Start/End: Original strand, 7193508 - 7193627
Alignment:
Q  94 aaaaaataatttagtg-ttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatcaactttcccatggtggaaaagaactctcctt 192  Q
    |||||||||| ||||| ||||||||||||||||  ||| ||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| |||    
T  7193508 aaaaaataatctagtggttgagagagtatgatagaaatatattcctcatttaatctaatggatatgatcaactttcccatgatggaaaagaactctactt 7193607  T
Q  193 tcccaaattaaatggcacct 212  Q
    || |||||||||||||||||    
T  7193608 tctcaaattaaatggcacct 7193627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 134 - 207
Target Start/End: Original strand, 22582450 - 22582523
Alignment:
Q  134 ttcctcatttaatctaatggacatgatcaactttcccatggtggaaaagaactctcctttcccaaattaaatgg 207  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  22582450 ttcctcatttaatctaatggacatgatcaactttcccatggtgggaaagaactctcctttcccaaattaaatgg 22582523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 163 - 212
Target Start/End: Original strand, 7532440 - 7532489
Alignment:
Q  163 actttcccatggtggaaaagaactctcctttcccaaattaaatggcacct 212  Q
    |||||||||||||| ||||||| ||||||||||||||||||||| |||||    
T  7532440 actttcccatggtgaaaaagaagtctcctttcccaaattaaatgccacct 7532489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 163 - 205
Target Start/End: Original strand, 26227408 - 26227450
Alignment:
Q  163 actttcccatggtggaaaagaactctcctttcccaaattaaat 205  Q
    |||||||||||||||||||||| |||| |||||||||||||||    
T  26227408 actttcccatggtggaaaagaagtctcatttcccaaattaaat 26227450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 211
Target Start/End: Complemental strand, 24126021 - 24125972
Alignment:
Q  162 aactttcccatggtggaaaagaactctcctttcccaaattaaatggcacc 211  Q
    |||||||||||||||| ||| ||||| |||||||||||||||||| ||||    
T  24126021 aactttcccatggtgggaaacaactcccctttcccaaattaaatgccacc 24125972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 158 - 211
Target Start/End: Original strand, 24126713 - 24126766
Alignment:
Q  158 gatcaactttcccatggtggaaaagaactctcctttcccaaattaaatggcacc 211  Q
    |||||||||||||||| ||| ||| ||||| |||||||||||||||||| ||||    
T  24126713 gatcaactttcccatgatgggaaacaactcccctttcccaaattaaatgccacc 24126766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 211
Target Start/End: Complemental strand, 7531877 - 7531829
Alignment:
Q  163 actttcccatggtggaaaagaactctcctttcccaaattaaatggcacc 211  Q
    ||||||||||||| | |||||| ||||||||||||||||||||| ||||    
T  7531877 actttcccatggtaggaaagaagtctcctttcccaaattaaatgccacc 7531829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 211
Target Start/End: Original strand, 15082640 - 15082672
Alignment:
Q  179 aaagaactctcctttcccaaattaaatggcacc 211  Q
    |||||||||||||||||||||||||||||||||    
T  15082640 aaagaactctcctttcccaaattaaatggcacc 15082672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 211
Target Start/End: Complemental strand, 22580629 - 22580597
Alignment:
Q  179 aaagaactctcctttcccaaattaaatggcacc 211  Q
    |||||||||||||||||||||||||||||||||    
T  22580629 aaagaactctcctttcccaaattaaatggcacc 22580597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 211
Target Start/End: Complemental strand, 22587115 - 22587083
Alignment:
Q  179 aaagaactctcctttcccaaattaaatggcacc 211  Q
    |||||||||||||||||||||||||||||||||    
T  22587115 aaagaactctcctttcccaaattaaatggcacc 22587083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 211
Target Start/End: Original strand, 33479940 - 33479972
Alignment:
Q  179 aaagaactctcctttcccaaattaaatggcacc 211  Q
    |||||||||||||||||||||||||||||||||    
T  33479940 aaagaactctcctttcccaaattaaatggcacc 33479972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 163 - 214
Target Start/End: Original strand, 14337557 - 14337608
Alignment:
Q  163 actttcccatggtggaaaagaactctcctttcccaaattaaatggcacctca 214  Q
    ||||||||||| ||| |||||| | | |||||||||||||||||||||||||    
T  14337557 actttcccatgatgggaaagaagtttgctttcccaaattaaatggcacctca 14337608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 151
Target Start/End: Original strand, 6032709 - 6032779
Alignment:
Q  81 tggaagatagtgtaaaaaataatttagtgttgagagagtatgataagaatgtattcctcatttaatctaat 151  Q
    ||||||||||||| || || ||| |||||||||||||| ||| ||||||| | ||| ||| ||||||||||    
T  6032709 tggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaat 6032779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 151
Target Start/End: Complemental strand, 13944420 - 13944350
Alignment:
Q  81 tggaagatagtgtaaaaaataatttagtgttgagagagtatgataagaatgtattcctcatttaatctaat 151  Q
    ||||||||||||| || || ||| |||||||||||||  ||| ||||||| | ||| ||||||||||||||    
T  13944420 tggaagatagtgtgaagaaaaatctagtgttgagagatcatgttaagaatatgttcttcatttaatctaat 13944350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 197
Target Start/End: Original strand, 25067794 - 25067884
Alignment:
Q  107 gtgttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatcaactttcccatggtggaaaagaactctcctttccca 197  Q
    ||||||||||| ||| |||||| |||||| || |||| ||| ||||||||  | ||||||||| ||||||| ||| || | ||||||||||    
T  25067794 gtgttgagagactataataagattgtatttcttatttgatccaatggacaaaaacaactttcctatggtgggaaacaaatatcctttccca 25067884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 100 - 190
Target Start/End: Complemental strand, 29290234 - 29290144
Alignment:
Q  100 taatttagtgttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatcaactttcccatggtggaaaagaactctcc 190  Q
    |||| |||||||||  ||||||||||||| ||||||| | ||||||||  ||||  |  || |||||||||||||||| ||| ||||||||    
T  29290234 taatctagtgttgaaggagtatgataagagtgtattctttatttaatcccatggttaacattaactttcccatggtgggaaacaactctcc 29290144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 151
Target Start/End: Complemental strand, 30610841 - 30610771
Alignment:
Q  81 tggaagatagtgtaaaaaataatttagtgttgagagagtatgataagaatgtattcctcatttaatctaat 151  Q
    ||||||||||||| || || ||| |||||||||||||| ||| ||||||| | ||| ||| ||||||||||    
T  30610841 tggaagatagtgtcaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaat 30610771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 151
Target Start/End: Original strand, 30611301 - 30611371
Alignment:
Q  81 tggaagatagtgtaaaaaataatttagtgttgagagagtatgataagaatgtattcctcatttaatctaat 151  Q
    ||||||||||||| || || ||| |||||||||||||| ||| ||||||| | ||| ||| ||||||||||    
T  30611301 tggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcagttaatctaat 30611371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 211
Target Start/End: Original strand, 9574571 - 9574619
Alignment:
Q  163 actttcccatggtggaaaagaactctcctttcccaaattaaatggcacc 211  Q
    ||||||| ||||||| |||||| ||||||||||||| ||||||| ||||    
T  9574571 actttcctatggtgggaaagaagtctcctttcccaagttaaatgccacc 9574619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 104; Significance: 6e-52; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 64 - 211
Target Start/End: Original strand, 4479603 - 4479750
Alignment:
Q  64 acatgaaagagagagggtggaagatagtgtaaaaaataatttagtgttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatcaa 163  Q
    |||||||||||||| | || |||||| | |||||||||||||||||| ||||||||||||||||||| | ||||||||||||||||||||||||||| ||    
T  4479603 acatgaaagagagatgatgaaagataatataaaaaataatttagtgtggagagagtatgataagaatatgttcctcatttaatctaatggacatgattaa 4479702  T
Q  164 ctttcccatggtggaaaagaactctcctttcccaaattaaatggcacc 211  Q
    |||||||||||||  |||||||||||||||||||||||||||||||||    
T  4479703 ctttcccatggtgagaaagaactctcctttcccaaattaaatggcacc 4479750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 64 - 211
Target Start/End: Original strand, 21471853 - 21472002
Alignment:
Q  64 acatgaaagagagagggtggaagatagtgtaaaaaa-taatttagtg-ttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatc 161  Q
    ||||||||||||||| ||| |||||||| ||||||| |||| ||||| |||||||||||||||| |||| | ||||||||||||||||||||| ||||||    
T  21471853 acatgaaagagagagtgtgaaagatagtataaaaaaataatctagtggttgagagagtatgataggaatatgttcctcatttaatctaatggatatgatc 21471952  T
Q  162 aactttcccatggtggaaaagaactctcctttcccaaattaaatggcacc 211  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  21471953 aactttcccatggtgggaaagaactctcctttcccaaattaaatggcacc 21472002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 64 - 212
Target Start/End: Complemental strand, 21471166 - 21471016
Alignment:
Q  64 acatgaaagagagagggtggaagatagtgtaaaaaa-taatttagtgt-tgagagagtatgataagaatgtattcctcatttaatctaatggacatgatc 161  Q
    ||||||||||||||| ||| |||||||| ||||||| |||| |||||  ||||||||||||||| |||| | ||| ||||||||||||||||||||||||    
T  21471166 acatgaaagagagagtgtgaaagatagtataaaaaaataatctagtggctgagagagtatgataggaatatgttcttcatttaatctaatggacatgatc 21471067  T
Q  162 aactttcccatggtggaaaagaactctcctttcccaaattaaatggcacct 212  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  21471066 aactttcccatggtgggaaagaactctcctttcccaaattaaatggcacct 21471016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 64 - 216
Target Start/End: Complemental strand, 38834536 - 38834382
Alignment:
Q  64 acatgaaagagagagggtggaagatagtgtaaaaaa-taatttagtg-ttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatc 161  Q
    ||||||||||||||| ||| |||||||| ||||||| |||| ||||| ||||||||||||||||| ||| | ||||||||||||||||||||||||||||    
T  38834536 acatgaaagagagagtgtgaaagatagtataaaaaaataatctagtggttgagagagtatgataaaaatatgttcctcatttaatctaatggacatgatc 38834437  T
Q  162 aactttcccatggtggaaaagaactctcctttcccaaattaaatggcacctcaat 216  Q
    ||||||||| |||||| |||| || ||||||||||||||||||||||||||||||    
T  38834436 aactttcccgtggtgggaaagtaccctcctttcccaaattaaatggcacctcaat 38834382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 98 - 211
Target Start/End: Complemental strand, 14573374 - 14573261
Alignment:
Q  98 aataatttagtgttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatcaactttcccatggtggaaaagaactctcctttccca 197  Q
    |||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||    
T  14573374 aataatctagtgttgagagagtatgataaaaatatattcctcatttaatctaatggacatgatcaactttcccatggtgggaaaaaactctcctttccca 14573275  T
Q  198 aattaaatggcacc 211  Q
    ||||||||||||||    
T  14573274 aattaaatggcacc 14573261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 94 - 212
Target Start/End: Complemental strand, 37548116 - 37547997
Alignment:
Q  94 aaaaaataatttagtg-ttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatcaactttcccatggtggaaaagaactctcctt 192  Q
    |||||||||| ||||| |||||||||||||||| |||| | |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  37548116 aaaaaataatctagtggttgagagagtatgataggaatatgttcctcatttaatctaatggacatgatcaactttcccatgatgggaaagaactctcctt 37548017  T
Q  193 tcccaaattaaatggcacct 212  Q
    ||||||||||||||||||||    
T  37548016 tcccaaattaaatggcacct 37547997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 94 - 211
Target Start/End: Complemental strand, 13134436 - 13134318
Alignment:
Q  94 aaaaaataatttagtg-ttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatcaactttcccatggtggaaaagaactctcctt 192  Q
    |||||||||| ||||| |||| |||||||||||  ||| | ||||||||||||| |||||||||||||||||||||| ||||||| ||||||||||||||    
T  13134436 aaaaaataatctagtggttgatagagtatgatagaaatatgttcctcatttaatttaatggacatgatcaactttcctatggtgggaaagaactctcctt 13134337  T
Q  193 tcccaaattaaatggcacc 211  Q
    |||||||||||||||||||    
T  13134336 tcccaaattaaatggcacc 13134318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 109 - 212
Target Start/End: Original strand, 14573945 - 14574048
Alignment:
Q  109 gttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatcaactttcccatggtggaaaagaactctcctttcccaaattaaatggc 208  Q
    ||||||||||||||||| |||| | || |||||||||||||||||| |||||||||||||  ||||||| ||||||||||||||||||||||||||||||    
T  14573945 gttgagagagtatgataggaatatgtttctcatttaatctaatggatatgatcaactttcttatggtgggaaagaactctcctttcccaaattaaatggc 14574044  T
Q  209 acct 212  Q
    ||||    
T  14574045 acct 14574048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 94 - 212
Target Start/End: Original strand, 38834566 - 38834685
Alignment:
Q  94 aaaaaataatttagtg-ttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatcaactttcccatggtggaaaagaactctcctt 192  Q
    |||||||||| ||||| ||||||||||||||||  ||| | ||| |||||||||||||||||||||||||||||||||| ||| | ||| ||||||||||    
T  38834566 aaaaaataatctagtggttgagagagtatgatagaaatatgttcttcatttaatctaatggacatgatcaactttcccacggtaggaaaaaactctcctt 38834665  T
Q  193 tcccaaattaaatggcacct 212  Q
    ||||||||||||||||||||    
T  38834666 tcccaaattaaatggcacct 38834685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 83 - 197
Target Start/End: Original strand, 36391592 - 36391706
Alignment:
Q  83 gaagatagtgtaaaaaataatttagtgttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatcaactttcccatggtggaaaag 182  Q
    ||||||||||||  ||||||| |||||||||| || ||  |||||| ||  ||||||||||||| ||||||  |  ||  |||||||||||||||||||     
T  36391592 gaagatagtgtaggaaataatctagtgttgagggaataaaataagagtgcgttcctcatttaatttaatggttaaaatttactttcccatggtggaaaac 36391691  T
Q  183 aactctcctttccca 197  Q
    ||||| |||||||||    
T  36391692 aactcccctttccca 36391706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 163 - 211
Target Start/End: Original strand, 33433160 - 33433208
Alignment:
Q  163 actttcccatggtggaaaagaactctcctttcccaaattaaatggcacc 211  Q
    ||||||||||||||| |||||||||||||||| ||||||||| ||||||    
T  33433160 actttcccatggtgggaaagaactctcctttctcaaattaaacggcacc 33433208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 72 - 212
Target Start/End: Complemental strand, 4478990 - 4478850
Alignment:
Q  72 gagagagggtggaagatagtgtaaaaaataatttagtgttgagagagtatgataagaat--gtattcctcatttaatctaatggacatgatcaactttcc 169  Q
    |||||||| || |||||||| ||||||||||| |||||| ||||||||||||||| |||   | |||||| || ||| ||||||    |||  |||||||    
T  4478990 gagagaggatgaaagatagtataaaaaataatctagtgtggagagagtatgataa-aatcaatgttcctc-ttgaatataatggttgagatttactttcc 4478893  T
Q  170 catggtggaaaagaactctcctttcccaaattaaatggcacct 212  Q
    |||| ||| |||||| | | |||||||||||||||||||||||    
T  4478892 catgatgggaaagaagtttgctttcccaaattaaatggcacct 4478850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 165 - 212
Target Start/End: Complemental strand, 45139738 - 45139691
Alignment:
Q  165 tttcccatggtggaaaagaactctcctttcccaaattaaatggcacct 212  Q
    ||||||||| |||||||||| ||||||||||||||||||||| |||||    
T  45139738 tttcccatgatggaaaagaagtctcctttcccaaattaaatgccacct 45139691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 163 - 213
Target Start/End: Complemental strand, 5276513 - 5276463
Alignment:
Q  163 actttcccatggtggaaaagaactctcctttcccaaattaaatggcacctc 213  Q
    ||||||||||||||| |||||| ||||||||||||| ||||||| ||||||    
T  5276513 actttcccatggtgggaaagaagtctcctttcccaagttaaatgccacctc 5276463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 81 - 151
Target Start/End: Original strand, 11256696 - 11256766
Alignment:
Q  81 tggaagatagtgtaaaaaataatttagtgttgagagagtatgataagaatgtattcctcatttaatctaat 151  Q
    ||||||||||||| || || ||| |||||||||||||| ||| ||||||| ||||| ||| ||||||||||    
T  11256696 tggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatattcttcacttaatctaat 11256766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 81 - 151
Target Start/End: Original strand, 20244127 - 20244197
Alignment:
Q  81 tggaagatagtgtaaaaaataatttagtgttgagagagtatgataagaatgtattcctcatttaatctaat 151  Q
    ||||||||||||| || || |||||||||||||||||| ||| ||||||| | ||| ||| ||||||||||    
T  20244127 tggaagatagtgtgaagaaaaatttagtgttgagagagcatgttaagaatatgttcttcacttaatctaat 20244197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 212
Target Start/End: Original strand, 1164792 - 1164825
Alignment:
Q  179 aaagaactctcctttcccaaattaaatggcacct 212  Q
    ||||||||||||||||||||||||||||||||||    
T  1164792 aaagaactctcctttcccaaattaaatggcacct 1164825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 211
Target Start/End: Complemental strand, 30544842 - 30544727
Alignment:
Q  96 aaaataatttagtgttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatcaactttcccatggtggaaaagaactctcctttcc 195  Q
    ||||||||| ||||||| ||||  ||||||| | |||| || | |||||||| |||||  |  ||||||||||||||  ||| ||| ||||  | |||||    
T  30544842 aaaataattcagtgttgtgagaacatgataatagtgtactctttatttaatcaaatggctaaaatcaactttcccatcatgggaaacaacttccatttcc 30544743  T
Q  196 caaattaaatggcacc 211  Q
    ||||||||||||||||    
T  30544742 caaattaaatggcacc 30544727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 151
Target Start/End: Complemental strand, 11256246 - 11256176
Alignment:
Q  81 tggaagatagtgtaaaaaataatttagtgttgagagagtatgataagaatgtattcctcatttaatctaat 151  Q
    ||||||||||||| || || ||| |||||||||||||| ||| ||||||| | ||| ||| ||||||||||    
T  11256246 tggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaat 11256176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 151
Target Start/End: Original strand, 17918641 - 17918711
Alignment:
Q  81 tggaagatagtgtaaaaaataatttagtgttgagagagtatgataagaatgtattcctcatttaatctaat 151  Q
    ||||||||||||| || || ||| |||||||||||||| ||| ||||||| | ||| ||| ||||||||||    
T  17918641 tggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaat 17918711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 151
Target Start/End: Original strand, 28224344 - 28224414
Alignment:
Q  81 tggaagatagtgtaaaaaataatttagtgttgagagagtatgataagaatgtattcctcatttaatctaat 151  Q
    ||||||||||||| || || |||||||||||||||||  ||| ||||||| | ||| ||| ||||||||||    
T  28224344 tggaagatagtgtgaagaaaaatttagtgttgagagaacatgttaagaatatgttcttcacttaatctaat 28224414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 151
Target Start/End: Complemental strand, 33848003 - 33847933
Alignment:
Q  81 tggaagatagtgtaaaaaataatttagtgttgagagagtatgataagaatgtattcctcatttaatctaat 151  Q
    ||||||||||||| || || ||| |||||||||||||| ||| ||||||| | ||| ||| ||||||||||    
T  33848003 tggaagatagtgtgaagaaaaatatagtgttgagagagcatgttaagaatatgttcttcacttaatctaat 33847933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 151
Target Start/End: Complemental strand, 39476645 - 39476575
Alignment:
Q  81 tggaagatagtgtaaaaaataatttagtgttgagagagtatgataagaatgtattcctcatttaatctaat 151  Q
    ||||||||||||| || || ||| |||||||||||||  ||| ||||||| ||||| ||| ||||||||||    
T  39476645 tggaagatagtgtgaagaaaaatctagtgttgagagatcatgttaagaatatattcttcacttaatctaat 39476575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 151
Target Start/End: Original strand, 39477281 - 39477351
Alignment:
Q  81 tggaagatagtgtaaaaaataatttagtgttgagagagtatgataagaatgtattcctcatttaatctaat 151  Q
    ||||||||||||| || || ||| |||||||||||||| ||| ||||||| | ||| ||| ||||||||||    
T  39477281 tggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaat 39477351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 178 - 211
Target Start/End: Complemental strand, 17069154 - 17069121
Alignment:
Q  178 aaaagaactctcctttcccaaattaaatggcacc 211  Q
    ||||||||||||||||| ||||||||||||||||    
T  17069154 aaaagaactctcctttctcaaattaaatggcacc 17069121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 163 - 212
Target Start/End: Original strand, 19521917 - 19521966
Alignment:
Q  163 actttcccatggtggaaaagaactctcctttcccaaattaaatggcacct 212  Q
    ||||||||||| ||| |||||| | | |||||||||||||||||||||||    
T  19521917 actttcccatgatgggaaagaagtttgctttcccaaattaaatggcacct 19521966  T

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Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 197
Target Start/End: Complemental strand, 36391063 - 36390971
Alignment:
Q  105 tagtgttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatcaactttcccatggtggaaaagaactctcctttccca 197  Q
    ||||||||||||| || ||| | ||||| |||||||||| |||||||||  |  ||  ||||||||||||||| ||| ||||  |||||||||    
T  36391063 tagtgttgagagaataggattaaaatgtgttcctcatttgatctaatggttaaaatttactttcccatggtgggaaacaacttccctttccca 36390971  T

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Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 193
Target Start/End: Original strand, 36476696 - 36476776
Alignment:
Q  113 agagagtatgataagaatgtattcctcatttaatctaatggacatgatcaactttcccatggtggaaaagaactctccttt 193  Q
    ||||| |||||||| | ||| ||||| |||||||||||||| || ||  | |||||||||| ||| ||||||||| |||||    
T  36476696 agagactatgataaaattgtgttccttatttaatctaatggtcaagaaaatctttcccatgatgggaaagaactccccttt 36476776  T

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Target: scaffold0311 (Bit Score: 94; Significance: 6e-46; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 64 - 213
Target Start/End: Original strand, 58 - 210
Alignment:
Q  64 acatgaaagagagagggtggaagatagtgtaaaaaa--taatttagtg-ttgagagagtatgataagaatgtattcctcatttaatctaatggacatgat 160  Q
    ||||||||||||||| ||| |||||||| |||||||  |||| ||||| |||||||||||||||| |||| | ||||||||||||||||||| |||| ||    
T  58 acatgaaagagagagtgtgaaagatagtataaaaaaaataatctagtggttgagagagtatgataggaatatgttcctcatttaatctaatgaacataat 157  T
Q  161 caactttcccatggtggaaaagaactctcctttcccaaattaaatggcacctc 213  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  158 caactttcccatggtgggaaagaactctcctttcccaaattaaatggcacctc 210  T

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Target: scaffold0332 (Bit Score: 77; Significance: 8e-36; HSPs: 1)
Name: scaffold0332
Description:

Target: scaffold0332; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 69 - 211
Target Start/End: Original strand, 9162 - 9306
Alignment:
Q  69 aaagagagagggtggaagatagtgtaaaaaa-taatttagtg-ttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatcaactt 166  Q
    |||||||||| ||| |||||||| ||||||| |||| ||||| ||||||||||||||||||||| | ||| ||||||||||||||||||||||| |||||    
T  9162 aaagagagagtgtgaaagatagtataaaaaaataatctagtggttgagagagtatgataagaatatgttcatcatttaatctaatggacatgatgaactt 9261  T
Q  167 tcccatggtggaaaagaactctcctttcccaaattaaatggcacc 211  Q
    | |||||||| |||| ||||||||||| |||||||||||| ||||    
T  9262 ttccatggtgaaaaaaaactctccttttccaaattaaatgacacc 9306  T

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Target: scaffold0700 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0700
Description:

Target: scaffold0700; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 73 - 169
Target Start/End: Complemental strand, 5457 - 5361
Alignment:
Q  73 agagagggtggaagatagtgtaaaaaataatttagtgttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatcaactttcc 169  Q
    |||||| ||||||||||   ||||||||||| |||| | || |||||| ||||||||||| || |||||||||||||||||| || ||| |||||||    
T  5457 agagagtgtggaagatatcataaaaaataatctagtatggaaagagtaggataagaatgtgtttctcatttaatctaatggatataatctactttcc 5361  T

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Target: scaffold0007 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 151
Target Start/End: Complemental strand, 11395 - 11325
Alignment:
Q  81 tggaagatagtgtaaaaaataatttagtgttgagagagtatgataagaatgtattcctcatttaatctaat 151  Q
    ||||||||||||| || || ||| |||||||||||||| ||| ||||||| | ||| ||| ||||||||||    
T  11395 tggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaat 11325  T

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Target: scaffold2003 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold2003
Description:

Target: scaffold2003; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 100 - 153
Target Start/End: Complemental strand, 702 - 649
Alignment:
Q  100 taatttagtgttgagagagtatgataagaatgtattcctcatttaatctaatgg 153  Q
    |||| |||||||||  ||||||||||||| ||||||| | ||||||||||||||    
T  702 taatctagtgttgaaggagtatgataagagtgtattctttatttaatctaatgg 649  T

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Target: scaffold1037 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold1037
Description:

Target: scaffold1037; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 163 - 212
Target Start/End: Original strand, 2899 - 2948
Alignment:
Q  163 actttcccatggtggaaaagaactctcctttcccaaattaaatggcacct 212  Q
    ||||||||||||| |||||||| | |||||||||| ||||||| ||||||    
T  2899 actttcccatggtagaaaagaagtatcctttcccagattaaatagcacct 2948  T

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Target: scaffold1031 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold1031
Description:

Target: scaffold1031; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 163 - 212
Target Start/End: Original strand, 3018 - 3067
Alignment:
Q  163 actttcccatggtggaaaagaactctcctttcccaaattaaatggcacct 212  Q
    ||||||||||||| |||||||| | |||||||||| ||||||| ||||||    
T  3018 actttcccatggtagaaaagaagtatcctttcccagattaaatagcacct 3067  T

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