View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5165_high_38 (Length: 251)
Name: NF5165_high_38
Description: NF5165
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5165_high_38 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 192; Significance: 1e-104; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 32 - 251
Target Start/End: Original strand, 960923 - 961142
Alignment:
| Q |
32 |
tggtaacttttcctccataaagtcactcaatccgaatccttttgcattatattttatttcactcttttgtatatttatgaaaatgaaaatatacaagaag |
131 |
Q |
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| T |
960923 |
tggtaacttttcctccataaagtcactcaatccgaatccttttgcattatattttatttcactcttttgtatatttatgaaaatgaaaatatacaagaag |
961022 |
T |
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| Q |
132 |
gattatattttatctccataatctagttataacatgtttgaattgacaattgaacaattagaattatgatgagccactacaatttcgacaaaaactatgt |
231 |
Q |
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| T |
961023 |
gattatattttatctccataatctagttataacatgtttgaattgacaattggacaattaaaattatagtgaaccactgtaatttcgacaaaaactatgt |
961122 |
T |
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| Q |
232 |
tttgttgactctccaaaatt |
251 |
Q |
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|||||||||||||||||||| |
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| T |
961123 |
tttgttgactctccaaaatt |
961142 |
T |
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