View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5165_high_62 (Length: 213)
Name: NF5165_high_62
Description: NF5165
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5165_high_62 |
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Alignment Details
Target: chr2 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 14 - 198
Target Start/End: Complemental strand, 42072600 - 42072416
Alignment:
| Q |
14 |
gagcagagaactgagaaacaggggaaggagatggaaatctagctttagctgggcctggacttgggcttgggctatttccttgagttaatgcagcatgaag |
113 |
Q |
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| T |
42072600 |
gagcagagaactgagaaacaggggaaggagatggaaatctagctttagctgggcctggacttgggcttgggctatttccttgagttaatgcagcatgaag |
42072501 |
T |
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| Q |
114 |
ggctcttaactcaactgctttagctatggcagtttgaatttcttgtctgttaagctcattgttgttttgttgaaaaggttgttgt |
198 |
Q |
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| T |
42072500 |
ggctcttaactcaactgctttagctatggcagtttgaatttcttgtctgttaagctcattgttgttttgttgaaaaggttgttgt |
42072416 |
T |
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