View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF5165_low_18 (Length: 387)
Name: NF5165_low_18
Description: NF5165
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5165_low_18 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 351; Significance: 0; HSPs: 20)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 351; E-Value: 0
Query Start/End: Original strand, 1 - 371
Target Start/End: Original strand, 22830822 - 22831192
Alignment:
| Q |
1 |
tgaagatgagaatccaacatacattctattgttgagaattggggaaagatctttggtcaatgataacgtcggttgtcttggtttatgactaaaaccaaca |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
22830822 |
tgaagatgagaatccaacatacattctattgttgagaattggggaaagatctttggtcaatgataacgtcggttgtgttggtttatgactaaaaccaaca |
22830921 |
T |
|
| Q |
101 |
ctaactggagctaaggtaacatcaatccttttcttcactccatcatattcaatccatacctgcataggatgtccactggtaagggataaattcctgaatc |
200 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22830922 |
ctaactggagctaaggtaacatcaatctttttcttcactccatcatattcaatccatacctgcataggatgtccactggtaagggataaattcctgaatc |
22831021 |
T |
|
| Q |
201 |
gaccagtatcatcataatatcctgcaggagttgaattagctgatttcaaatcattgatatcaataccaacatggttatcattgatatcatcaaactcaaa |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| |
|
|
| T |
22831022 |
gaccagtatcatcataatatcctgcaggagttgaattagctgatttcaaatcattgatatcaattccaacatgattatcattgatatcatcaaactcaaa |
22831121 |
T |
|
| Q |
301 |
attttgacgagtgtcaagctcaacaccaaaaacatggttgctactgtttccaatgttggagtagttaaaga |
371 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22831122 |
atttttacgagtgtcaagctcaacaccaaaaacatggttgctactgtttccaatgttggagtagttaaaga |
22831192 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 1 - 371
Target Start/End: Original strand, 22839843 - 22840213
Alignment:
| Q |
1 |
tgaagatgagaatccaacatacattctattgttgagaattggggaaagatctttggtcaatgataacgtcggttgtcttggtttatgactaaaaccaaca |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
22839843 |
tgaagatgagaatccaacatacattctattgttgagaattggggaaagatctttggtcaatgataacgtcggttgtgttggtttatgactaaaaccaaca |
22839942 |
T |
|
| Q |
101 |
ctaactggagctaaggtaacatcaatccttttcttcactccatcatattcaatccatacctgcataggatgtccactggtaagggataaattcctgaatc |
200 |
Q |
| |
|
|||| |||||||||||||||||||||| |||||||||||| |||||||||||||||||| |||||||||| |||||||| |||||||||| |||||||| |
|
|
| T |
22839943 |
ctaaatggagctaaggtaacatcaatctttttcttcactctatcatattcaatccatacttgcataggatatccactggagagggataaatccctgaatc |
22840042 |
T |
|
| Q |
201 |
gaccagtatcatcataatatcctgcaggagttgaattagctgatttcaaatcattgatatcaataccaacatggttatcattgatatcatcaaactcaaa |
300 |
Q |
| |
|
|| | ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22840043 |
gattatattcatcgtaatatcctgcaggagttgaattagctgatttcaaatcattgatatcaataccaacatggttatcattgatatcatcaaactcact |
22840142 |
T |
|
| Q |
301 |
attttgacgagtgtcaagctcaacaccaaaaacatggttgctactgtttccaatgttggagtagttaaaga |
371 |
Q |
| |
|
| || || |||| ||||| |||||||||||||||||||||| || ||||||||||||||| | |||||||| |
|
|
| T |
22840143 |
acttagaagagtatcaagttcaacaccaaaaacatggttgccaccgtttccaatgttggattggttaaaga |
22840213 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 1 - 371
Target Start/End: Original strand, 22889083 - 22889453
Alignment:
| Q |
1 |
tgaagatgagaatccaacatacattctattgttgagaattggggaaagatctttggtcaatgataacgtcggttgtcttggtttatgactaaaaccaaca |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| ||||||||| |||| ||||||| |
|
|
| T |
22889083 |
tgaagatgagaatccaacatacattctattgttgagaattgaagaaagatctttggtcaatgataacaaaggttgtgttggtttattactagcaccaaca |
22889182 |
T |
|
| Q |
101 |
ctaactggagctaaggtaacatcaatccttttcttcactccatcatattcaatccatacctgcataggatgtccactggtaagggataaattcctgaatc |
200 |
Q |
| |
|
|| | ||| ||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| | |||||||| ||||||||||| | ||||| |
|
|
| T |
22889183 |
ctcattggtgctaaagtaacatcaatctttttcttcactccatcatattcaatccatacctgcatagggtatccactggaaagggataaatccttgaatt |
22889282 |
T |
|
| Q |
201 |
gaccagtatcatcataatatcctgcaggagttgaattagctgatttcaaatcattgatatcaataccaacatggttatcattgatatcatcaaactcaaa |
300 |
Q |
| |
|
||||| | ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| |
|
|
| T |
22889283 |
gaccataaccatcataatatcctgcaggagttgaatcagctgatttcaaatcattgatatcaattccaacatggttatcgttgatatcatcaaactcaaa |
22889382 |
T |
|
| Q |
301 |
attttgacgagtgtcaagctcaacaccaaaaacatggttgctactgtttccaatgttggagtagttaaaga |
371 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | |||||||| |
|
|
| T |
22889383 |
attttgacgagtgtcaagctcaacaccaaaaacatggttgctactgtttccactgttggaatcgttaaaga |
22889453 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 1 - 371
Target Start/End: Original strand, 22814818 - 22815188
Alignment:
| Q |
1 |
tgaagatgagaatccaacatacattctattgttgagaattggggaaagatctttggtcaatgataacgtcggttgtcttggtttatgactaaaaccaaca |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| ||||||||| |||| ||||||| |
|
|
| T |
22814818 |
tgaagatgagaatccaacatacattctattgttgagaattgaagaaagatctttggtcaatgataacaaaggttgtgttggtttattactagcaccaaca |
22814917 |
T |
|
| Q |
101 |
ctaactggagctaaggtaacatcaatccttttcttcactccatcatattcaatccatacctgcataggatgtccactggtaagggataaattcctgaatc |
200 |
Q |
| |
|
|| | ||||||||| |||||||||||| ||||||||||||||||||| |||||||||||||| |||||| |||| ||| ||||||||| | ||||||| |
|
|
| T |
22814918 |
ctcattggagctaaagtaacatcaatctttttcttcactccatcatagtcaatccatacctgtataggaaatccattggaaagggataactccctgaatt |
22815017 |
T |
|
| Q |
201 |
gaccagtatcatcataatatcctgcaggagttgaattagctgatttcaaatcattgatatcaataccaacatggttatcattgatatcatcaaactcaaa |
300 |
Q |
| |
|
||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| || |
|
|
| T |
22815018 |
gaccatgatcattataatatcctgcaggagttgaattagctgatttcaaataattgatatcgataccaacatggttatcattgatatcatcaaactgcaa |
22815117 |
T |
|
| Q |
301 |
attttgacgagtgtcaagctcaacaccaaaaacatggttgctactgtttccaatgttggagtagttaaaga |
371 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| | |||||||| |
|
|
| T |
22815118 |
atcttgacgagtgtcaagctcaacaccaaaaacatggttgttactgtttccattgttggaatcgttaaaga |
22815188 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 183; E-Value: 7e-99
Query Start/End: Original strand, 1 - 370
Target Start/End: Original strand, 22858250 - 22858622
Alignment:
| Q |
1 |
tgaagatgagaatccaacatacattctattgttgagaattggggaaagatctttggtcaatgataacgtcggttgtcttggtttatgac---taaaacca |
97 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||||||||||| || ||||||||| ||| || ||||||| | || ||||| |
|
|
| T |
22858250 |
tgaagatgagaatccaacatacattctattgttgagaattggagaaagatctttcgtgaatgataacaaaggtcgtgctggtttaacaacattacaacca |
22858349 |
T |
|
| Q |
98 |
acactaactggagctaaggtaacatcaatccttttcttcactccatcatattcaatccatacctgcataggatgtccactggtaagggataaattcctga |
197 |
Q |
| |
|
| | ||| ||||||||| ||||||||||| |||||||||||||||||||||| ||||||||||||||||||| |||||| | ||||||||| | ||| |
|
|
| T |
22858350 |
aaattaattggagctaatgtaacatcaatatttttcttcactccatcatattctatccatacctgcataggatatccactagaaagggataagtcgttga |
22858449 |
T |
|
| Q |
198 |
atcgaccagtatcatcataatatcctgcaggagttgaattagctgatttcaaatcattgatatcaataccaacatggttatcattgatatcatcaaactc |
297 |
Q |
| |
|
|||||||| || ||| ||| |||||||||||||||||||||||||||||||||| |||||| ||||||||| ||||||||| |||||||||||||||||| |
|
|
| T |
22858450 |
atcgaccaatagcattatagtatcctgcaggagttgaattagctgatttcaaattattgatgtcaataccagcatggttattattgatatcatcaaactc |
22858549 |
T |
|
| Q |
298 |
aaaattttgacgagtgtcaagctcaacaccaaaaacatggttgctactgtttccaatgttggagtagttaaag |
370 |
Q |
| |
|
|| || |||| |||||||||||||||| |||| |||||||||||| |||||||||||||||| | ||||||| |
|
|
| T |
22858550 |
aagatcttgaatagtgtcaagctcaacagcaaacacatggttgctagtgtttccaatgttggaatcgttaaag |
22858622 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 5 - 360
Target Start/End: Original strand, 22893748 - 22894094
Alignment:
| Q |
5 |
gatgagaatccaacatacattctattgttgagaattggggaaagatctttggtcaatgataacgtcggttgtcttggtttatgactaaaaccaacactaa |
104 |
Q |
| |
|
||||| |||||||||||||| |||||||| |||||||| |||||||||||||||||||||||| |||||| |||||||| ||||| ||| |
|
|
| T |
22893748 |
gatgaaaatccaacatacatactattgttaagaattggagaaagatctttggtcaatgataacaaaggttgttttggtttaa---------caacattaa |
22893838 |
T |
|
| Q |
105 |
ctggagctaaggtaacatcaatccttttcttcactccatcatattcaatccatacctgcataggatgtccactggtaagggataaattcctgaatcgacc |
204 |
Q |
| |
|
||||||||| |||||||||||| ||||||| | ||||||||||||||||||||||||||||||| |||||| ||||| || |||| ||||| |||| |
|
|
| T |
22893839 |
ttggagctaaagtaacatcaatctttttcttttcaccatcatattcaatccatacctgcataggatagccactgataaggcttatattcttgaattgacc |
22893938 |
T |
|
| Q |
205 |
agtatcatcataatatcctgcaggagttgaattagctgatttcaaatcattgatatcaataccaacatggttatcattgatatcatcaaactcaaaattt |
304 |
Q |
| |
|
| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
22893939 |
attaccatcataatatcctgcaggagttgaattagctgatttcaaatcattgatatcaataccaacatggttatcattgatatcatcaaactcacgattt |
22894038 |
T |
|
| Q |
305 |
tgacgagtgtcaagctcaacaccaaaaacatggttgctactgtttccaatgttgga |
360 |
Q |
| |
|
| | ||| ||||| |||||||||||||| ||||||||| |||||| ||||||| |
|
|
| T |
22894039 |
tcaatagtatcaagttcaacaccaaaaacgtggttgctaggatttccattgttgga |
22894094 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 1 - 371
Target Start/End: Original strand, 22809432 - 22809805
Alignment:
| Q |
1 |
tgaagatgagaatccaacatacattctattgttgagaattggggaaagatctttggtcaatgataacgtcggttgtcttggtttatgac---taaaacca |
97 |
Q |
| |
|
|||||||||||||||||||||||| ||| |||| |||||||| |||||||||||||| ||||||||| ||| || |||||||| | |||||||| |
|
|
| T |
22809432 |
tgaagatgagaatccaacatacatactagtgttaagaattggagaaagatctttggtgaatgataacaaaggtcgtgttggtttaacaacattaaaacca |
22809531 |
T |
|
| Q |
98 |
acactaactggagctaaggtaacatcaatccttttcttcactccatcatattcaatccatacctgcataggatgtccactggtaagggataaattcctga |
197 |
Q |
| |
|
||| ||| ||||||||| ||| |||||||| ||||||| | |||||||||||||||||||| |||||||||| |||||| |||| | |||| ||| |
|
|
| T |
22809532 |
acattaattggagctaaagtagcatcaatctttttcttttcaccatcatattcaatccatacatgcataggatagccactgaaaaggctcatattcttga |
22809631 |
T |
|
| Q |
198 |
atcgaccagtatcatcataatatcctgcaggagttgaattagctgatttcaaatcattgatatcaataccaacatggttatcattgatatcatcaaactc |
297 |
Q |
| |
|
|| ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
22809632 |
attgaccattactatcataatatcctgcaggagttgaattagctgatttcaaatcattgatatcaataccaatatggttatcattgatatcatcaaactc |
22809731 |
T |
|
| Q |
298 |
aaaattttgacgagtgtcaagctcaacaccaaaaacatggttgctactgtttccaatgttggagtagttaaaga |
371 |
Q |
| |
|
| | || || |||| || || |||||||| ||||||||||| |||||||||||| ||||||| | |||||||| |
|
|
| T |
22809732 |
actacttagaagagtatctagttcaacaccgaaaacatggttactactgtttccattgttggattggttaaaga |
22809805 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 1 - 371
Target Start/End: Original strand, 22875713 - 22876077
Alignment:
| Q |
1 |
tgaagatgagaatccaacatacattctattgttgagaattggggaaagatctttggtcaatgataacgtcggttgtcttggtttatgactaaaaccaaca |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| ||||||||| |||| | | | |
|
|
| T |
22875713 |
tgaagatgagaatccaacatacattctattgttgagaattggagaaagatctttggtcaatgataacaaaggttgtgttggtttattactagcatctat- |
22875811 |
T |
|
| Q |
101 |
ctaactggagctaaggtaacatcaatccttttcttcactccatcatattcaatccatacctgcataggatgtccactggtaagggataaattcctgaatc |
200 |
Q |
| |
|
||||||||| |||||||||||| |||| |||||||||||||| ||||||||||||||||| |||| ||||||| ||||||||||| |||||||| |
|
|
| T |
22875812 |
-----tggagctaaagtaacatcaatcttttttttcactccatcatagtcaatccatacctgcatgggatatccactgaaaagggataaatccctgaatc |
22875906 |
T |
|
| Q |
201 |
gaccagtatcatcataatatcctgcaggagttgaattagctgatttcaaatcattgatatcaataccaacatggttatcattgatatcatcaaactcaaa |
300 |
Q |
| |
|
|| | ||||| |||||||||| || ||||||| |||||||||||||||||||||||||||| |||||||||||||||| |||||||| ||||||| |
|
|
| T |
22875907 |
gattatattcatcgtaatatcctgtagaagttgaaatagctgatttcaaatcattgatatcaattccaacatggttatcatcgatatcattaaactcatt |
22876006 |
T |
|
| Q |
301 |
attttgacgagtgtcaagctcaacaccaaaaacatggttgctactgtttccaatgttggagtagttaaaga |
371 |
Q |
| |
|
| | | || ||||| ||||||||||||||||||||||||||||||||| |||| || | |||||||| |
|
|
| T |
22876007 |
agtcaaaacagaatcaagttcaacaccaaaaacatggttgctactgtttccattgtttgaattgttaaaga |
22876077 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 151; E-Value: 8e-80
Query Start/End: Original strand, 5 - 371
Target Start/End: Original strand, 22898067 - 22898424
Alignment:
| Q |
5 |
gatgagaatccaacatacattctattgttgagaattggggaaagatctttggtcaatgataacgtcggttgtcttggtttatgactaaaaccaacactaa |
104 |
Q |
| |
|
||||| |||||||||||||| |||||||| | |||||| ||||||||| |||||||||| ||| |||||| |||||||| ||||| ||| |
|
|
| T |
22898067 |
gatgaaaatccaacatacatactattgtttaaaattggagaaagatctctggtcaatgacaacaaaggttgttttggtttaa---------caacattaa |
22898157 |
T |
|
| Q |
105 |
ctggagctaaggtaacatcaatccttttcttcactccatcatattcaatccatacctgcataggatgtccactggtaagggataaattcctgaatcgacc |
204 |
Q |
| |
|
||||||||| |||||||||||| ||||||| | ||||||||||||||||||||||||||||||| |||||| ||||| |||||| ||| | |||| |
|
|
| T |
22898158 |
ttggagctaaagtaacatcaatctttttcttttcaccatcatattcaatccatacctgcataggattgccactgaaaagggtcaaattcttgagttgacc |
22898257 |
T |
|
| Q |
205 |
agtatcatcataatatcctgcaggagttgaattagctgatttcaaatcattgatatcaataccaacatggttatcattgatatcatcaaactcaaaattt |
304 |
Q |
| |
|
| || ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | | |
|
|
| T |
22898258 |
attaacatcataatatcctgcaggagttgatttagctgatttcaaatcattgatatcaataccaacatggttatcattgatatcattaaactcactacta |
22898357 |
T |
|
| Q |
305 |
tgacgagtgtcaagctcaacaccaaaaacatggttgctactgtttccaatgttggagtagttaaaga |
371 |
Q |
| |
|
| ||| ||||| |||||||||||||||||||||||||| |||||| ||||||| | |||||||| |
|
|
| T |
22898358 |
ataatagtatcaagttcaacaccaaaaacatggttgctactatttccattgttggatttgttaaaga |
22898424 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 22880382 - 22880642
Alignment:
| Q |
1 |
tgaagatgagaatccaacatacattctattgttgagaattggggaaagatctttggtcaatgataacgtcggttgtcttggtttatgactaaaaccaaca |
100 |
Q |
| |
|
||||||||| |||||||||||||| ||||||||||||||||| |||||||||||||||||||| ||| || || ||||||||| | ||||||||||| |
|
|
| T |
22880382 |
tgaagatgataatccaacatacatactattgttgagaattggagaaagatctttggtcaatgacaacaaatgtcgtgttggtttattattaaaaccaaca |
22880481 |
T |
|
| Q |
101 |
ctaactggagctaaggtaacatcaatccttttcttcactccatcatattcaatccatacctgcataggatgtccactggtaagggataaattcctgaatc |
200 |
Q |
| |
|
|||| |||||||| ||||| |||||| ||||||||||||||||||| ||||||||||||||||| |||| |||||||| ||||||||||| | |||||| |
|
|
| T |
22880482 |
ctaatcggagctaatgtaacctcaatctttttcttcactccatcatagtcaatccatacctgcatgggatatccactggaaagggataaatccttgaatc |
22880581 |
T |
|
| Q |
201 |
gaccagtatcatcataatatcctgcaggagttgaattagctgatttcaaatcattgatatc |
261 |
Q |
| |
|
|| || |||||||||||||||||||| | ||||||| |||||||||||||||||||||| |
|
|
| T |
22880582 |
gatcataatcatcataatatcctgcagaaattgaatttactgatttcaaatcattgatatc |
22880642 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 172 - 360
Target Start/End: Original strand, 22885559 - 22885744
Alignment:
| Q |
172 |
tccactggtaagggataaattcctgaatcgaccagtatcatcataatatcctgcaggagttgaattagctgatttcaaatcattgatatcaataccaaca |
271 |
Q |
| |
|
|||||||| |||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
22885559 |
tccactggaaagggataaattcctgaatc---cataatcatcataatatcctgcaggagttgaattagctgatttcaaatcattgatatcaataccaata |
22885655 |
T |
|
| Q |
272 |
tggttatcattgatatcatcaaactcaaaattttgacgagtgtcaagctcaacaccaaaaacatggttgctactgtttccaatgttgga |
360 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||| |||||||||||||| ||||||||||||| |||||||||||||| ||||||| |
|
|
| T |
22885656 |
tggttatcattgatttcatcaaactcaaaattttgatcagtgtcaagctcaataccaaaaacatggctgctactgtttccattgttgga |
22885744 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 1 - 360
Target Start/End: Original strand, 22805109 - 22805459
Alignment:
| Q |
1 |
tgaagatgagaatccaacatacattctattgttgagaattggggaaagatctttggtcaatgataacgtcggttgtcttggtttatgactaaaaccaaca |
100 |
Q |
| |
|
|||||||||||||||||||||||| |||||||| |||||||| |||||||||||||||| |||||||| ||| | |||||||| ||||| |
|
|
| T |
22805109 |
tgaagatgagaatccaacatacatactattgttaagaattggagaaagatctttggtcattgataacgaaggtcctgttggtttaa---------caaca |
22805199 |
T |
|
| Q |
101 |
ctaactggagctaaggtaacatcaatccttttcttcactccatcatattcaatccatacctgcataggatgtccactggtaagggataaattcctgaatc |
200 |
Q |
| |
|
|||||||||||| |||||||||||| ||||||||||||||||||| |||||||||||||| ||||||| |||||||| |||| || | |||| | |
|
|
| T |
22805200 |
taaactggagctaaagtaacatcaatctttttcttcactccatcataatcaatccatacctgtataggatttccactggaaaggtctactgttctgattt |
22805299 |
T |
|
| Q |
201 |
gaccagtatcatcataatatcctgcaggagttgaattagctgatttcaaatcattgatatcaataccaacatggttatcattgatatcatcaaactcaaa |
300 |
Q |
| |
|
||||| |||||| ||||| |||||| |||||| | ||||||||| ||||||||||| ||||||| | ||||||| | | |||| |||||||||| |
|
|
| T |
22805300 |
gaccatgatcatcgtaataggctgcagtagttgagacaactgatttcagatcattgatattaataccatcgtggttattgtcaacatcaccaaactcaaa |
22805399 |
T |
|
| Q |
301 |
attttgacgagtgtcaagctcaacaccaaaaacatggttgctactgtttccaatgttgga |
360 |
Q |
| |
|
|| || | ||||||||| |||||||||||||||||||||| |||||||||| ||||||| |
|
|
| T |
22805400 |
atctttagaagtgtcaagttcaacaccaaaaacatggttgccactgtttccattgttgga |
22805459 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 22885416 - 22885539
Alignment:
| Q |
1 |
tgaagatgagaatccaacatacattctattgttgagaattggggaaagatctttggtcaatgataacgtcggttgtcttggtttatgactaaaaccaaca |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||| |||||| ||||||||| ||||||||||||| |
|
|
| T |
22885416 |
tgaagatgagaatccaacatacattctattgttgagtattggagaaagatctttggtcaatgataacaaaggttgtgttggtttatcactaaaaccaaca |
22885515 |
T |
|
| Q |
101 |
ctaactggagctaaggtaacatca |
124 |
Q |
| |
|
|||| ||||||||| ||||||||| |
|
|
| T |
22885516 |
ctaattggagctaaagtaacatca |
22885539 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 22913465 - 22913605
Alignment:
| Q |
1 |
tgaagatgagaatccaacatacattctattgttgagaattggggaaagatctttggtcaatgataacgtcggttgtcttggtttatgactaaaaccaaca |
100 |
Q |
| |
|
|||||||||||||||||||||||| ||| |||| ||||||| |||||||||||| ||||||||||| |||||| ||||||| | ||||| |
|
|
| T |
22913465 |
tgaagatgagaatccaacatacatactagtgttaagaattgaagaaagatctttgttcaatgataacaaaggttgttttggttt---------aacaaca |
22913555 |
T |
|
| Q |
101 |
ctaactggagctaaggtaacatcaatccttttcttcactccatcatattc |
150 |
Q |
| |
|
||| ||||||||| |||||||||||| |||||||||||||||||||||| |
|
|
| T |
22913556 |
ttaattggagctaaagtaacatcaatctttttcttcactccatcatattc |
22913605 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 5 - 170
Target Start/End: Original strand, 22826053 - 22826209
Alignment:
| Q |
5 |
gatgagaatccaacatacattctattgttgagaattggggaaagatctttggtcaatgataacgtcggttgtcttggtttatgactaaaaccaacactaa |
104 |
Q |
| |
|
|||||||||||||||||||| |||||||| | |||||| | ||||||| |||||||||| ||| |||||| |||||||| ||||| ||| |
|
|
| T |
22826053 |
gatgagaatccaacatacatactattgttcaaaattggaggaagatctctggtcaatgaaaacaaaggttgttttggtttaa---------caacattaa |
22826143 |
T |
|
| Q |
105 |
ctggagctaaggtaacatcaatccttttcttcactccatcatattcaatccatacctgcataggat |
170 |
Q |
| |
|
||||||||| |||||||||||| |||| || | ||||||||||| ||||||||||||||||||| |
|
|
| T |
22826144 |
ttggagctaaagtaacatcaatctttttattttcaccatcatattctatccatacctgcataggat |
22826209 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 277 - 358
Target Start/End: Original strand, 22880631 - 22880712
Alignment:
| Q |
277 |
atcattgatatcatcaaactcaaaattttgacgagtgtcaagctcaacaccaaaaacatggttgctactgtttccaatgttg |
358 |
Q |
| |
|
|||||||||||| ||||||||||||| |||| |||||||| ||||||| ||||||||||||||||| |||||||| ||||| |
|
|
| T |
22880631 |
atcattgatatcgtcaaactcaaaatcttgaacagtgtcaaactcaacagcaaaaacatggttgctaatgtttccagtgttg |
22880712 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 257 - 339
Target Start/End: Original strand, 22922209 - 22922291
Alignment:
| Q |
257 |
atatcaataccaacatggttatcattgatatcatcaaactcaaaattttgacgagtgtcaagctcaacaccaaaaacatggtt |
339 |
Q |
| |
|
||||| |||||||||||||||||||| |||||| |||||||||||| |||| |||||||| ||||||| |||||| |||||| |
|
|
| T |
22922209 |
atatctataccaacatggttatcattaatatcaccaaactcaaaatcttgaacagtgtcaaactcaacagcaaaaagatggtt |
22922291 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 211 - 297
Target Start/End: Original strand, 22913669 - 22913755
Alignment:
| Q |
211 |
atcataatatcctgcaggagttgaattagctgatttcaaatcattgatatcaataccaacatggttatcattgatatcatcaaactc |
297 |
Q |
| |
|
||||||||||||||| | || || || ||||||||||| ||||||||||||| ||||||||||| |||||||||||||| ||||| |
|
|
| T |
22913669 |
atcataatatcctgccgaagccgatttctctgatttcaaaccattgatatcaattccaacatggttgtcattgatatcatcgaactc |
22913755 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 253 - 339
Target Start/End: Complemental strand, 22933386 - 22933300
Alignment:
| Q |
253 |
attgatatcaataccaacatggttatcattgatatcatcaaactcaaaattttgacgagtgtcaagctcaacaccaaaaacatggtt |
339 |
Q |
| |
|
|||||| || |||||||||||||||||||| ||||||||||||||||| | |||| |||||||| ||| ||| |||||| |||||| |
|
|
| T |
22933386 |
attgatgtctataccaacatggttatcattaatatcatcaaactcaaagtcttgagcagtgtcaaactcgacagcaaaaatatggtt |
22933300 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 322 - 371
Target Start/End: Original strand, 22842264 - 22842313
Alignment:
| Q |
322 |
aacaccaaaaacatggttgctactgtttccaatgttggagtagttaaaga |
371 |
Q |
| |
|
|||||||||||||||||||||||| |||||| ||||||| | |||||||| |
|
|
| T |
22842264 |
aacaccaaaaacatggttgctactatttccattgttggaattgttaaaga |
22842313 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 1 - 371
Target Start/End: Complemental strand, 21150923 - 21150553
Alignment:
| Q |
1 |
tgaagatgagaatccaacatacattctattgttgagaattggggaaagatctttggtcaatgataacgtcggttgtcttggtttatgactaaaaccaaca |
100 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||| ||| |||||||||||||||||||||||| ||| | |||||| | | ||||||||||| |
|
|
| T |
21150923 |
tgaagatgagaatccaacatacatactattgttgagaactggagaaagatctttggtcaatgataacaaaggtcttgctggttttttattaaaaccaaca |
21150824 |
T |
|
| Q |
101 |
ctaactggagctaaggtaacatcaatccttttcttcactccatcatattcaatccatacctgcataggatgtccactggtaagggataaattcctgaatc |
200 |
Q |
| |
|
|||| ||||||||| ||||||| |||| | ||||| | |||||||||||||||||||| |||||||||| ||||||| ||||||||||| |||||| |
|
|
| T |
21150823 |
ctaattggagctaaagtaacattaatcttcttcttttcaccatcatattcaatccatacatgcataggatatccactgaaaagggataaatcattgaatc |
21150724 |
T |
|
| Q |
201 |
gaccagtatcatcataatatcctgcaggagttgaattagctgatttcaaatcattgatatcaataccaacatggttatcattgatatcatcaaactcaaa |
300 |
Q |
| |
|
| || ||||||||||||| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
21150723 |
catcattatcatcataatagcctgcagaagttgagttagctgatttcaaatcattgatatcaataccaacatggttattattgatatcatcaaactcaaa |
21150624 |
T |
|
| Q |
301 |
attttgacgagtgtcaagctcaacaccaaaaacatggttgctactgtttccaatgttggagtagttaaaga |
371 |
Q |
| |
|
|| |||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| | |||||||| |
|
|
| T |
21150623 |
atcttgaacagtgtcaagctcaacaccaaaaacatggttgctactgtttccattgttggaattgttaaaga |
21150553 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 242 - 300
Target Start/End: Original strand, 15628278 - 15628336
Alignment:
| Q |
242 |
gatttcaaatcattgatatcaataccaacatggttatcattgatatcatcaaactcaaa |
300 |
Q |
| |
|
||||||||| ||||||| || |||||||||||||||||||| |||||||||||| |||| |
|
|
| T |
15628278 |
gatttcaaaccattgatgtctataccaacatggttatcattaatatcatcaaacccaaa |
15628336 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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