View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5166_high_21 (Length: 299)
Name: NF5166_high_21
Description: NF5166
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5166_high_21 |
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Alignment Details
Target: chr5 (Bit Score: 275; Significance: 1e-154; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 275; E-Value: 1e-154
Query Start/End: Original strand, 10 - 284
Target Start/End: Original strand, 8517284 - 8517558
Alignment:
| Q |
10 |
aatataatgcacaataaacaaaggggttggagtctaaacatgacaaggggaccctatgaattgataaacatgtgaagccatgttactcttgtctcctaaa |
109 |
Q |
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| T |
8517284 |
aatataatgcacaataaacaaaggggttggagtctaaacatgacaaggggaccctatgaattgataaacatgtgaagccatgttactcttgtctcctaaa |
8517383 |
T |
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| Q |
110 |
ttcttctatagagacaaaacaaggcaggcaccaatggtcgcataagcagtaaaaaggtttatggttaaaccaatcaacacatctcctctctcattaccaa |
209 |
Q |
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| T |
8517384 |
ttcttctatagagacaaaacaaggcaggcaccaatggtcgcataagcagtaaaaaggtttatggttaaaccaatcaacacatctcctctctcattaccaa |
8517483 |
T |
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| Q |
210 |
ccaaacgattctgtcttgtaaatcgttgtcatgtaaagtttcatctatgctattaaaggtataaacaaaataagt |
284 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8517484 |
ccaaacgattctgtcttgtaaatcgttgtcatgtaaagtttcatctatgctattaaaggtataaacaaaataagt |
8517558 |
T |
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