View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5167-Insertion-5 (Length: 425)
Name: NF5167-Insertion-5
Description: NF5167
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5167-Insertion-5 |
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| [»] chr6 (1 HSPs) |
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Alignment Details
Target: chr6 (Bit Score: 380; Significance: 0; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 380; E-Value: 0
Query Start/End: Original strand, 8 - 425
Target Start/End: Original strand, 24754820 - 24755237
Alignment:
| Q |
8 |
gaaggctggatatcatatcaacaaagaaaaatataacccaaatgaattttaaacacacagacaaaagacaatccacaattatgccatgaaacatgtatac |
107 |
Q |
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| T |
24754820 |
gaaggctggatatcatatcaacaaagaaaaatataaccaaaatgaattttaaacacacaaacaaaagacaatccataattatgcgatgaaacatgtatac |
24754919 |
T |
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| Q |
108 |
aacggtaaatgccaaacctgatttttggaggattttggagtctcagaattcttagtatgtactgcaccatttgtaaatttatttaatggactagcagatg |
207 |
Q |
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| T |
24754920 |
aacggtaaatgccaaacctgatttttggaggattttggagtctcagaattcttagtatgtactgcaccattagtaaatttatttaatggactagcagatg |
24755019 |
T |
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| Q |
208 |
atggagttaacactttaatatcagattcttttgggttaggctcctcgaaacttgatgttttcacattctcatttgttgagggatatacactatcctcatt |
307 |
Q |
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| T |
24755020 |
atggagttaacactttaatatcagattcttttgggttaggctcctcgaaacttgatgttttcgcattctcatttgttgagggatatacactatcctcatt |
24755119 |
T |
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| Q |
308 |
catcttcccagcaagatcaatcacttcytgaagaggggctactgaattctctagaaatacacttcgagtgttgctcttttctacctcagacaccgaaacc |
407 |
Q |
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|||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| || |
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| T |
24755120 |
catcctcccagcaagatcaatcacttcttgaagaggggctactgaattctctagaaatacacttcgagtgttgctcttttctacctcagacacagaagcc |
24755219 |
T |
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| Q |
408 |
gcggtcttaactgaatta |
425 |
Q |
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| T |
24755220 |
gcggtcttaactgaatta |
24755237 |
T |
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