View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5169-Insertion-3 (Length: 663)

Name: NF5169-Insertion-3
Description: NF5169
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5169-Insertion-3
NF5169-Insertion-3
[»] chr6 (28 HSPs)
chr6 (334-663)||(29094880-29095211)
chr6 (339-586)||(17756886-17757134)
chr6 (338-642)||(4409223-4409529)
chr6 (339-636)||(14910639-14910936)
chr6 (338-642)||(23574421-23574725)
chr6 (339-633)||(18736036-18736331)
chr6 (454-648)||(7968479-7968673)
chr6 (339-642)||(8306087-8306390)
chr6 (339-620)||(15119590-15119871)
chr6 (345-619)||(18728971-18729246)
chr6 (339-642)||(29482618-29482922)
chr6 (339-543)||(21508507-21508712)
chr6 (342-641)||(18014329-18014629)
chr6 (449-619)||(18258574-18258744)
chr6 (450-642)||(12738522-12738714)
chr6 (401-642)||(24438491-24438733)
chr6 (470-636)||(19860052-19860218)
chr6 (339-618)||(15349496-15349777)
chr6 (337-636)||(15369490-15369791)
chr6 (339-613)||(3876374-3876649)
chr6 (480-641)||(15318989-15319150)
chr6 (336-437)||(27964957-27965058)
chr6 (545-636)||(18043373-18043464)
chr6 (341-440)||(18043508-18043607)
chr6 (339-440)||(23524250-23524351)
chr6 (529-605)||(23524128-23524204)
chr6 (341-433)||(19857705-19857797)
chr6 (520-556)||(15933504-15933540)
[»] chr4 (22 HSPs)
chr4 (338-663)||(25239700-25240026)
chr4 (339-663)||(13861319-13861644)
chr4 (399-663)||(17282419-17282684)
chr4 (338-642)||(12885307-12885611)
chr4 (338-619)||(10985582-10985863)
chr4 (339-642)||(3268361-3268665)
chr4 (339-642)||(12217588-12217885)
chr4 (339-618)||(9901571-9901850)
chr4 (339-663)||(21332413-21332738)
chr4 (449-636)||(3270579-3270766)
chr4 (339-588)||(16396135-16396385)
chr4 (339-606)||(45313209-45313476)
chr4 (336-642)||(26780681-26780988)
chr4 (339-497)||(18284484-18284643)
chr4 (391-632)||(49402729-49402972)
chr4 (339-655)||(28891921-28892243)
chr4 (339-655)||(8082057-8082375)
chr4 (491-642)||(34845478-34845630)
chr4 (370-499)||(26778764-26778894)
chr4 (604-655)||(18284661-18284712)
chr4 (609-663)||(10422052-10422106)
chr4 (337-366)||(17282371-17282400)
[»] chr5 (18 HSPs)
chr5 (339-663)||(23495354-23495678)
chr5 (339-663)||(20899465-20899790)
chr5 (338-663)||(36712518-36712843)
chr5 (399-660)||(5590626-5590888)
chr5 (344-662)||(33622365-33622686)
chr5 (339-642)||(28067893-28068196)
chr5 (339-553)||(22510097-22510312)
chr5 (339-619)||(5931240-5931521)
chr5 (339-538)||(13537860-13538060)
chr5 (339-642)||(15620061-15620364)
chr5 (339-663)||(38608272-38608608)
chr5 (339-619)||(8244561-8244846)
chr5 (469-619)||(42792531-42792681)
chr5 (512-619)||(22922681-22922788)
chr5 (369-597)||(19329823-19330052)
chr5 (349-609)||(41037524-41037785)
chr5 (526-619)||(22922098-22922191)
chr5 (339-518)||(24095343-24095523)
[»] scaffold0096 (1 HSPs)
scaffold0096 (339-662)||(10741-11065)
[»] chr7 (20 HSPs)
chr7 (336-663)||(18153134-18153462)
chr7 (352-663)||(47295564-47295875)
chr7 (338-663)||(21592743-21593071)
chr7 (338-642)||(30770056-30770359)
chr7 (339-636)||(20093569-20093866)
chr7 (462-663)||(18185630-18185831)
chr7 (339-642)||(29164876-29165178)
chr7 (336-619)||(22705649-22705932)
chr7 (171-331)||(42858080-42858241)
chr7 (370-642)||(21802477-21802750)
chr7 (469-642)||(9548968-9549141)
chr7 (337-615)||(7595403-7595686)
chr7 (339-606)||(38612620-38612888)
chr7 (339-619)||(2249860-2250141)
chr7 (341-535)||(21801716-21801911)
chr7 (339-482)||(40635506-40635648)
chr7 (565-642)||(22703923-22704000)
chr7 (335-603)||(30764845-30765114)
chr7 (526-618)||(28794084-28794176)
chr7 (339-440)||(9548828-9548929)
[»] chr1 (14 HSPs)
chr1 (339-663)||(24973756-24974080)
chr1 (343-663)||(21817605-21817932)
chr1 (335-565)||(49472309-49472537)
chr1 (336-641)||(19967285-19967590)
chr1 (341-642)||(19441982-19442283)
chr1 (339-528)||(21815425-21815615)
chr1 (339-642)||(8995308-8995610)
chr1 (338-636)||(9859000-9859303)
chr1 (528-663)||(22186045-22186180)
chr1 (341-642)||(38621830-38622132)
chr1 (377-642)||(8990668-8990934)
chr1 (565-660)||(21815619-21815714)
chr1 (337-499)||(33028963-33029126)
chr1 (339-500)||(30894082-30894243)
[»] chr8 (19 HSPs)
chr8 (339-660)||(25820725-25821047)
chr8 (340-642)||(32008884-32009186)
chr8 (342-633)||(18573889-18574181)
chr8 (338-641)||(18040356-18040652)
chr8 (338-642)||(41280676-41280982)
chr8 (338-642)||(7999677-7999980)
chr8 (481-636)||(10532801-10532956)
chr8 (402-642)||(2085674-2085915)
chr8 (341-618)||(11709419-11709709)
chr8 (450-642)||(7454647-7454839)
chr8 (339-606)||(22609363-22609631)
chr8 (335-618)||(24060609-24060893)
chr8 (384-642)||(24033789-24034051)
chr8 (339-642)||(33273391-33273679)
chr8 (363-520)||(10532633-10532791)
chr8 (590-663)||(1788656-1788729)
chr8 (384-499)||(17775790-17775905)
chr8 (339-440)||(7454521-7454622)
chr8 (469-561)||(45503914-45504008)
[»] scaffold0265 (3 HSPs)
scaffold0265 (343-663)||(14877-15204)
scaffold0265 (339-528)||(17194-17384)
scaffold0265 (565-660)||(17095-17190)
[»] scaffold0362 (1 HSPs)
scaffold0362 (338-663)||(7217-7543)
[»] chr2 (15 HSPs)
chr2 (339-647)||(27347191-27347499)
chr2 (335-663)||(41266061-41266391)
chr2 (339-642)||(3770287-3770591)
chr2 (339-642)||(23755687-23755991)
chr2 (338-642)||(3105231-3105536)
chr2 (339-642)||(25133793-25134106)
chr2 (339-636)||(19092754-19093051)
chr2 (384-642)||(42534036-42534295)
chr2 (452-642)||(23929824-23930014)
chr2 (339-618)||(26154851-26155131)
chr2 (476-619)||(29568365-29568507)
chr2 (339-440)||(23932909-23933010)
chr2 (338-500)||(22452688-22452849)
chr2 (590-642)||(26159154-26159206)
chr2 (336-366)||(42534002-42534032)
[»] scaffold0084 (1 HSPs)
scaffold0084 (339-636)||(54473-54770)
[»] scaffold0150 (1 HSPs)
scaffold0150 (339-642)||(29926-30230)
[»] scaffold0002 (2 HSPs)
scaffold0002 (336-642)||(391486-391794)
scaffold0002 (339-636)||(380794-381092)
[»] scaffold0042 (2 HSPs)
scaffold0042 (339-642)||(68700-69004)
scaffold0042 (469-642)||(74872-75045)
[»] scaffold0034 (2 HSPs)
scaffold0034 (450-642)||(47396-47588)
scaffold0034 (341-440)||(56229-56328)
[»] chr3 (15 HSPs)
chr3 (339-598)||(19790346-19790606)
chr3 (339-644)||(16852878-16853183)
chr3 (341-642)||(22915079-22915379)
chr3 (369-611)||(16914764-16915007)
chr3 (526-593)||(44635823-44635890)
chr3 (571-643)||(22006518-22006590)
chr3 (571-643)||(22014035-22014107)
chr3 (399-486)||(3559049-3559136)
chr3 (594-642)||(1998033-1998081)
chr3 (520-556)||(3786645-3786681)
chr3 (339-389)||(31530488-31530538)
chr3 (529-618)||(44451630-44451719)
chr3 (570-618)||(8733435-8733483)
chr3 (570-618)||(9085676-9085724)
chr3 (594-642)||(19773414-19773462)
[»] scaffold0170 (1 HSPs)
scaffold0170 (339-630)||(16185-16476)
[»] scaffold0008 (2 HSPs)
scaffold0008 (341-611)||(242731-243002)
scaffold0008 (339-642)||(253340-253644)
[»] scaffold0280 (1 HSPs)
scaffold0280 (339-619)||(909-1190)
[»] scaffold0026 (1 HSPs)
scaffold0026 (343-619)||(151164-151440)
[»] scaffold0058 (2 HSPs)
scaffold0058 (415-619)||(1658-1863)
scaffold0058 (517-619)||(15415-15517)
[»] scaffold0192 (1 HSPs)
scaffold0192 (336-619)||(12373-12654)
[»] scaffold0989 (1 HSPs)
scaffold0989 (399-642)||(1452-1694)
[»] scaffold0083 (1 HSPs)
scaffold0083 (339-619)||(4065-4346)
[»] scaffold0111 (1 HSPs)
scaffold0111 (339-613)||(2697-2974)
[»] scaffold0013 (1 HSPs)
scaffold0013 (336-618)||(37092-37374)
[»] scaffold0483 (1 HSPs)
scaffold0483 (338-556)||(9247-9462)
[»] scaffold0299 (1 HSPs)
scaffold0299 (565-642)||(19177-19254)
[»] scaffold0063 (2 HSPs)
scaffold0063 (529-618)||(36839-36928)
scaffold0063 (527-618)||(49284-49375)
[»] scaffold0011 (1 HSPs)
scaffold0011 (527-618)||(20342-20433)
[»] scaffold1272 (1 HSPs)
scaffold1272 (338-440)||(1973-2075)
[»] scaffold0025 (1 HSPs)
scaffold0025 (531-619)||(86424-86512)
[»] scaffold0233 (1 HSPs)
scaffold0233 (520-556)||(16044-16080)


Alignment Details
Target: chr6 (Bit Score: 229; Significance: 1e-126; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 334 - 663
Target Start/End: Original strand, 29094880 - 29095211
Alignment:
Q  334 catattgttctggaccggccaaaaggatctttgatccatttatttaggctcaataccatctaaaacccaaacaccacgtttgacaaaattactcgcgaca 433  Q
    |||| |||||||||||| |||||| ||||||||  ||||| | |||||| |||||||||| ||| ||||||||||||||||| |||||||||||||||||    
T  29094880 catagtgttctggaccgaccaaaaagatctttggcccattcacttaggcccaataccatccaaagcccaaacaccacgtttggcaaaattactcgcgaca 29094979  T
Q  434 cacccctcccatgcgagggg--gtgcacggaacgaaagagaccggttcaaacgaaacccaacgtctctttccacattcctgcaataaactcacaggcggt 531  Q
    ||||||| ||| ||||||||  ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||| ||||||||||||||||||||    
T  29094980 caccccttccacgcgagggggggtgcacggaacgaaagagaccggttcaaacgaaccccaacgtctctttccacgttcccgcaataaactcacaggcggt 29095079  T
Q  532 tacacttcccacaatttcgtaaccgtcagagtaaggtgtgccattacaacggctctgtagccctccacctctataaataggggactcaatgtagtcccca 631  Q
    |||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||    
T  29095080 tacacttcccacgatttcgtaaccgtcagagttaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtcccca 29095179  T
Q  632 aggtataatctttctttctctaaaaccctcac 663  Q
    ||||| |||||||||| |||| ||||||||||    
T  29095180 aggtagaatctttcttcctctcaaaccctcac 29095211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 157; E-Value: 4e-83
Query Start/End: Original strand, 339 - 586
Target Start/End: Original strand, 17756886 - 17757134
Alignment:
Q  339 tgttctggaccggccaaaaggatctttgatccatttatttaggctcaataccatctaaaacccaaacaccacgtttgacaaaattactcgcgacacaccc 438  Q
    ||||| |||||||||||||||||||||||  |||||| ||||||  ||||| ||| ||| ||||||||||||||||| ||||||||||||||||||||||    
T  17756886 tgttcgggaccggccaaaaggatctttgacacatttacttaggcctaatacaatcgaaagcccaaacaccacgtttggcaaaattactcgcgacacaccc 17756985  T
Q  439 ctcccatgcgagggg-gtgcacggaacgaaagagaccggttcaaacgaaacccaacgtctctttccacattcctgcaataaactcacaggcggttacact 537  Q
    || ||| |||||||| ||||||||||||||| |||  |||||||||||| |||||||||||||||||| ||||  |||||||||||||||||||||||||    
T  17756986 cttccacgcgaggggggtgcacggaacgaaaaagattggttcaaacgaaccccaacgtctctttccacgttcccacaataaactcacaggcggttacact 17757085  T
Q  538 tcccacaatttcgtaaccgtcagagtaaggtgtgccattacaacggctc 586  Q
    |||||| |||| |||||||||||||||||||||||||||||||||||||    
T  17757086 tcccacgattttgtaaccgtcagagtaaggtgtgccattacaacggctc 17757134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 338 - 642
Target Start/End: Complemental strand, 4409529 - 4409223
Alignment:
Q  338 ttgttctggaccggccaaaaggatctttgatccatttatttaggctcaataccatctaaaacccaaa-caccacgtttgacaaaattactcgcgacacac 436  Q
    ||||||| || ||||||||||||  ||||  ||||||| |||||| ||||| |||  ||| |||||| |||||||||||||||| ||||| | |||||||    
T  4409529 ttgttctcgatcggccaaaaggacatttggcccatttacttaggcccaatatcattcaaagcccaaaacaccacgtttgacaaagttacttgtgacacac 4409430  T
Q  437 ccctcccatgcgaggggg-tgcacggaacgaaagagaccggttcaaacgaaacccaacgtctctttccacattcctgcaataaactcacaggcggttaca 535  Q
    ||||  || || |||||| |||||||| |||||||||| |||||||||||| | |||||||||| | ||| |||| ||||||||| | |  |||||||||    
T  4409429 ccctttcacgcaaggggggtgcacggagcgaaagagactggttcaaacgaaccacaacgtctctatgcacgttcccgcaataaacgccctagcggttaca 4409330  T
Q  536 cttcccacaatttcgtaaccgtcagagtaaggtgtgccattacaacggctctgtagccctccacctctataaataggggactcaatgtagtccccaaggt 635  Q
    |||| ||| |||| ||||||| ||||| |||||||||||||  ||||||| || |||||||||||||||||||||| ||| |||||| ||||||||||||    
T  4409329 cttctcacgattttgtaaccgccagagcaaggtgtgccattgtaacggctttgcagccctccacctctataaatagaggattcaatgcagtccccaaggt 4409230  T
Q  636 ataatct 642  Q
    | |||||    
T  4409229 agaatct 4409223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 339 - 636
Target Start/End: Complemental strand, 14910936 - 14910639
Alignment:
Q  339 tgttctggaccggccaaaaggatctttgatccatttatttaggctcaataccatctaaaacccaaacaccacgtttgacaaaattactcgcgacacaccc 438  Q
    |||||||||||||||||||||| ||||   ||||||| |||||| |||||  ||| |||  ||||||||||| |||| ||| |||| | |||||||||||    
T  14910936 tgttctggaccggccaaaaggaccttttgcccatttacttaggcacaatagaatccaaagtccaaacaccacatttggcaacattatttgcgacacaccc 14910837  T
Q  439 ctcccatgcgagggggtgcacggaacgaaagagaccggttcaaacgaaacccaacgtctctttccacattcctgcaataaactcacaggcggttacactt 538  Q
    || ||      ||||||||||||| |||   ||||||||||||||||| | |||||||||| | ||| |||| |||||||||||   |||||||||||||    
T  14910836 cttccccaaatgggggtgcacggagcgagcaagaccggttcaaacgaaccacaacgtctctctgcacgttcccgcaataaactctatggcggttacactt 14910737  T
Q  539 cccacaatttcgtaaccgtcagagtaaggtgtgccattacaacggctctgtagccctccacctctataaataggggactcaatgtagtccccaaggta 636  Q
    |||||||||||||||| | |||||  | ||||||||||||||||||| || ||||||||||||||||| |||||||||||| || |||||||||||||    
T  14910736 cccacaatttcgtaactgccagagcgatgtgtgccattacaacggctttgcagccctccacctctatatataggggactcactgcagtccccaaggta 14910639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 338 - 642
Target Start/End: Complemental strand, 23574725 - 23574421
Alignment:
Q  338 ttgttctggaccggccaaaaggatctttgatccatttatttaggctcaataccatctaaaacccaaacaccacgtttgacaaaattactcgcgacacacc 437  Q
    ||||||||||||| ||||||||| |||||  ||||||| |||||| |||||| ||| ||| |||||||||||||||||||||| ||||| | || |||||    
T  23574725 ttgttctggaccgcccaaaaggacctttggcccatttacttaggcccaatacaatccaaagcccaaacaccacgtttgacaaagttacttgtgatacacc 23574626  T
Q  438 cctcccatgcgagggggtgcacggaacgaaagagaccggttcaaacgaaacccaacgtctctttccacattcctgcaataaactcacaggcggttacact 537  Q
    |||  |   | |||| ||||||||| |||| ||||| |||||||||||| | |||||||||| | ||  |||  ||||||||||| | || |||||||||    
T  23574625 cctttcccacaagggcgtgcacggagcgaacgagactggttcaaacgaaccacaacgtctctctacatgttctcgcaataaactctctggtggttacact 23574526  T
Q  538 tcccacaatttcgtaaccgtcagagtaaggtgtgccattacaacggctctgtagccctccacctctataaataggggactcaatgtagtccccaaggtat 637  Q
    | |||| | |||||||| | |||||  | |||||||||||||||||||||| ||||||| ||||||||||||||||||||||| | ||||| |||||||     
T  23574525 ttccacgacttcgtaacagccagagccaagtgtgccattacaacggctctgcagccctctacctctataaataggggactcaaagcagtccacaaggtag 23574426  T
Q  638 aatct 642  Q
    |||||    
T  23574425 aatct 23574421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 339 - 633
Target Start/End: Complemental strand, 18736331 - 18736036
Alignment:
Q  339 tgttctggaccggccaaaaggatctttgatccatttatttaggctcaataccatctaaaacccaaacaccacgtttgacaaaattactcgcgacacaccc 438  Q
    ||||||||||||||||||||||| ||||  ||||||| |||||| |||||  ||| ||| ||||||||||||||||| |||| ||||| || | | ||||    
T  18736331 tgttctggaccggccaaaaggatttttggcccatttacttaggcccaataatatccaaagcccaaacaccacgtttggcaaacttacttgcaatataccc 18736232  T
Q  439 ctcccatgcgag-ggggtgcacggaacgaaagagaccggttcaaacgaaacccaacgtctctttccacattcctgcaataaactcacaggcggttacact 537  Q
    ||  |  || || |||||||||||| |||  ||||  |||||||||||  | |||||||||| | ||| |||| ||||||||||| | |||| ||| |||    
T  18736231 ctttcccgcaagaggggtgcacggagcgagcgagattggttcaaacgagccacaacgtctctctacacgttcccgcaataaactctctggcgattagact 18736132  T
Q  538 tcccacaatttcgtaaccgtcagagtaaggtgtgccattacaacggctctgtagccctccacctctataaataggggactcaatgtagtccccaag 633  Q
    ||||||||||||||||||| |||||  |||||||||||||||||||||| | ||||||||||||||||||||||||||||||  | ||||||||||    
T  18736131 tcccacaatttcgtaaccgccagagccaggtgtgccattacaacggctcagcagccctccacctctataaataggggactcatagcagtccccaag 18736036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 454 - 648
Target Start/End: Original strand, 7968479 - 7968673
Alignment:
Q  454 gtgcacggaacgaaagagaccggttcaaacgaaacccaacgtctctttccacattcctgcaataaactcacaggcggttacacttcccacaatttcgtaa 553  Q
    |||||||||||||||||||| |||||||||||| | |||||||||| | ||| ||||  |||||||| | | ||||||||||||| ||||||||||||||    
T  7968479 gtgcacggaacgaaagagactggttcaaacgaaccacaacgtctctctgcacgttcccacaataaaccccctggcggttacactttccacaatttcgtaa 7968578  T
Q  554 ccgtcagagtaaggtgtgccattacaacggctctgtagccctccacctctataaataggggactcaatgtagtccccaaggtataatctttcttt 648  Q
    ||| |||||| ||||||||||||||||| |||||| ||||||||||||||||| ||||||||||||||| ||||||||||| | ||||| |||||    
T  7968579 ccgccagagtcaggtgtgccattacaacagctctgcagccctccacctctatatataggggactcaatgcagtccccaaggcagaatctatcttt 7968673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 339 - 642
Target Start/End: Complemental strand, 8306390 - 8306087
Alignment:
Q  339 tgttctggaccggccaaaaggatctttgatccatttatttaggctcaataccatctaaaacccaaacaccacgtttgacaaaattactcgcgacacaccc 438  Q
    ||||||||||||| ||||||||  ||||  |||| || |||||| |||||| ||||||| |||||||| ||||||||||||| ||||| || |||  |||    
T  8306390 tgttctggaccggtcaaaaggacatttggcccatatacttaggcccaatacgatctaaagcccaaacatcacgtttgacaaagttacttgcaacatcccc 8306291  T
Q  439 ctcccatgcgagggggtgcacggaacgaaagagaccggttcaaacgaaacccaacgtctctttccacattcctgcaataaactcacaggcggttacactt 538  Q
    ||  ||  | ||| ||||||| || |||||||||| |||||||||||  | |||||||||| |  |  |||| ||||||||||| | |||||||||||||    
T  8306290 ctttcagacaaggaggtgcacagagcgaaagagactggttcaaacgagtcacaacgtctctctgtaggttcccgcaataaactctctggcggttacactt 8306191  T
Q  539 cccacaatttcgtaaccgtcagagtaaggtgtgccattacaacggctctgtagccctccacctctataaataggggactcaatgtagtccccaaggtata 638  Q
     |||  ||||| |||| |  ||||| |||||||||||||||||||||||| | ||||||||||||||||||||||||||||  | ||||||||||||| |    
T  8306190 tccatgatttcataactgctagagtcaggtgtgccattacaacggctctgcaaccctccacctctataaataggggactcacagcagtccccaaggtaga 8306091  T
Q  639 atct 642  Q
    ||||    
T  8306090 atct 8306087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 339 - 620
Target Start/End: Original strand, 15119590 - 15119871
Alignment:
Q  339 tgttctggaccggccaaaaggatctttgatccatttatttaggctcaataccatctaaaacccaaacaccacgtttgacaaaattactcgcgacacaccc 438  Q
    |||||||||||||||||||||| ||| |  ||||||| |||||| |||||| ||| | | |||||||||||||||||||||| |||||   |||||||||    
T  15119590 tgttctggaccggccaaaaggaccttggc-ccatttacttaggcccaatacaatccagagcccaaacaccacgtttgacaaagttacttatgacacaccc 15119688  T
Q  439 ctcccatgcgaggggg-tgcacggaacgaaagagaccggttcaaacgaaacccaacgtctctttccacattcctgcaataaactcacaggcggttacact 537  Q
    || |||  | |||||| ||||| ||  ||||||||| |||||||||||| | |||||||||| | ||| |||| ||||||||||| |  ||||||| |||    
T  15119689 cttccacacaaggggggtgcacagagtgaaagagacaggttcaaacgaaccacaacgtctctctgcacgttcccgcaataaactctctagcggttatact 15119788  T
Q  538 tcccacaatttcgtaaccgtcagagtaaggtgtgccattacaacggctctgtagccctccacctctataaataggggactcaa 620  Q
    |||||| |||| ||||||| |||||  |||||||||||||||  ||||||| | | |||||||||||||||||||||||||||    
T  15119789 tcccacgattttgtaaccgccagagccaggtgtgccattacactggctctgcaactctccacctctataaataggggactcaa 15119871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 345 - 619
Target Start/End: Complemental strand, 18729246 - 18728971
Alignment:
Q  345 ggaccggccaaaaggatctttgatccatttatttaggctcaataccatctaaaacccaaacaccacgtttgacaaaattactcgcgacacacccctccca 444  Q
    |||| |||||||||||||||||  ||||||| ||||||  ||||| ||| |||||||||||||||||||||||||| ||||| |  ||||||| ||  |     
T  18729246 ggacaggccaaaaggatctttggcccatttacttaggcctaatactatccaaaacccaaacaccacgtttgacaaacttacttgtaacacaccgctttcc 18729147  T
Q  445 tgcgagg-gggtgcacggaacgaaagagaccggttcaaacgaaacccaacgtctctttccacattcctgcaataaactcacaggcggttacacttcccac 543  Q
     || ||| ||||||||||| |||| |||||||||||||| ||  | |||||||||| | ||| || | |||||||||||   ||||||||||||||||||    
T  18729146 cgcaaggagggtgcacggagcgaacgagaccggttcaaaggagccacaacgtctctctgcacgtttccgcaataaactctatggcggttacacttcccac 18729047  T
Q  544 aatttcgtaaccgtcagagtaaggtgtgccattacaacggctctgtagccctccacctctataaataggggactca 619  Q
     |||| ||| ||| |||||  |||||| ||||||||| | ||||| ||||||||||||||||||||||||||||||    
T  18729046 gattttgtacccgccagagccaggtgttccattacaatgtctctgcagccctccacctctataaataggggactca 18728971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 339 - 642
Target Start/End: Complemental strand, 29482922 - 29482618
Alignment:
Q  339 tgttctggaccggccaaaaggatctttgatccatttatttaggctcaataccatctaaaacccaaacaccacgtttgacaaaattactcgcgacacaccc 438  Q
    |||||||||  |||||||||||||||||  ||||||| | |||| ||| || ||| ||| ||||||| ||||||||| ||| |||||| |||||||||||    
T  29482922 tgttctggaaaggccaaaaggatctttggcccatttactcaggcccaacacaatccaaagcccaaacgccacgtttggcaacattacttgcgacacaccc 29482823  T
Q  439 ct---cccatgcgagggggtgcacggaacgaaagagaccggttcaaacgaaacccaacgtctctttccacattcctgcaataaactcacaggcggttaca 535  Q
    ||   ||||  | | | | |||||||| |||  |||||||||||||||||  | |||||||||| | ||  |||| ||||||||||| |   | |||| |    
T  29482822 cttttccca--caaagtgctgcacggagcgagcgagaccggttcaaacgagccacaacgtctctctgcatgttcccgcaataaactctctcacagttata 29482725  T
Q  536 cttcccacaatttcgtaaccgtcagagtaaggtgtgccattacaacggctctgtagccctccacctctataaataggggactcaatgtagtccccaaggt 635  Q
    |||||||| ||||||||||||  |||   |||||||||||||||||| ||||  ||||||||||||||||||||||||||||||  ||||||||||||||    
T  29482724 cttcccacgatttcgtaaccgctagaaccaggtgtgccattacaacgactctacagccctccacctctataaataggggactcatagtagtccccaaggt 29482625  T
Q  636 ataatct 642  Q
    | |||||    
T  29482624 agaatct 29482618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 339 - 543
Target Start/End: Original strand, 21508507 - 21508712
Alignment:
Q  339 tgttctggaccggccaaaaggatctttgatccatttatttaggctcaataccatctaaaacccaaacaccacgtttgacaaaattactcgcgacacaccc 438  Q
    ||||||||| |||||||| ||| |||||  ||||||| |||||| |||||| ||| ||| | |||||||||||||||||||| ||||| || ||||||||    
T  21508507 tgttctggatcggccaaagggacctttggcccatttacttaggcccaatacaatccaaagctcaaacaccacgtttgacaaagttacttgcaacacaccc 21508606  T
Q  439 ctcccatgcga-gggggtgcacggaacgaaagagaccggttcaaacgaaacccaacgtctctttccacattcctgcaataaactcacaggcggttacact 537  Q
    || |||||| | ||||||||||||| |||||||||| ||||||| |||| | || ||||||| | ||| ||||||||||||||||   ||||||||||||    
T  21508607 cttccatgcaaggggggtgcacggagcgaaagagactggttcaatcgaaccacagcgtctctctgcacgttcctgcaataaactctatggcggttacact 21508706  T
Q  538 tcccac 543  Q
    ||||||    
T  21508707 tcccac 21508712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 342 - 641
Target Start/End: Original strand, 18014329 - 18014629
Alignment:
Q  342 tctggaccggccaaaaggatctttgatccatttatttaggctcaataccatctaaaacccaaacaccacgtttgacaaaattactcgcgacacacccctc 441  Q
    |||||||||||||||| || |||||  ||||||| ||||||||||||| ||| | |  ||| |||| || | || ||| |||||| |||||| ||||||     
T  18014329 tctggaccggccaaaatgagctttggcccatttacttaggctcaatacaatccacagaccagacactacatgtggcaatattacttgcgacaaacccctt 18014428  T
Q  442 ccatgcgaggggg-tgcacggaacgaaagagaccggttcaaacgaaacccaacgtctctttccacattcctgcaataaactcacaggcggttacacttcc 540  Q
    ||  ||||||||| |||||||| |||   ||||| ||||||||||| | ||| || |   |  || |||| ||||||| ||| | || ||||| ||||||    
T  18014429 ccccgcgaggggggtgcacggagcgagcaagaccagttcaaacgaaccacaatgtttgactgtacgttcccgcaataatctctctggtggttagacttcc 18014528  T
Q  541 cacaatttcgtaaccgtcagagtaaggtgtgccattacaacggctctgtagccctccacctctataaataggggactcaatgtagtccccaaggtataat 640  Q
    ||| |||||||||||| |||||  |||||||||||||||||||||||| |||||||||||||||||  |||||||||||  | ||||||||||||| |||    
T  18014529 cacgatttcgtaaccgccagagctaggtgtgccattacaacggctctgcagccctccacctctatatgtaggggactcatagcagtccccaaggtagaat 18014628  T
Q  641 c 641  Q
    |    
T  18014629 c 18014629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 449 - 619
Target Start/End: Original strand, 18258574 - 18258744
Alignment:
Q  449 agggggtgcacggaacgaaagagaccggttcaaacgaaacccaacgtctctttccacattcctgcaataaactcacaggcggttacacttcccacaattt 548  Q
    |||||||||||| | |||  |||||||||||||| ||| | ||||||||||   |||||||| |||||||||||    || |||||||||||||||||||    
T  18258574 agggggtgcacgaagcgagtgagaccggttcaaaggaaccacaacgtctctccgcacattcccgcaataaactctttagcagttacacttcccacaattt 18258673  T
Q  549 cgtaaccgtcagagtaaggtgtgccattacaacggctctgtagccctccacctctataaataggggactca 619  Q
    ||||||| ||||||  |||||||||| ||||||||||||  ||||||| ||||||||||||||||||||||    
T  18258674 cgtaaccatcagagccaggtgtgccactacaacggctctacagccctctacctctataaataggggactca 18258744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 450 - 642
Target Start/End: Complemental strand, 12738714 - 12738522
Alignment:
Q  450 gggggtgcacggaacgaaagagaccggttcaaacgaaacccaacgtctctttccacattcctgcaataaactcacaggcggttacacttcccacaatttc 549  Q
    ||||||| ||||| ||||  ||||  ||||||||||| | |||||||||| | ||| |||| ||||||||||| |  | ||||||||||||||| |||||    
T  12738714 gggggtgtacggagcgaacaagactagttcaaacgaaccacaacgtctctctgcacgttcccgcaataaactctctagaggttacacttcccacgatttc 12738615  T
Q  550 gtaaccgtcagagtaaggtgtgccattacaacggctctgtagccctccacctctataaataggggactcaatgtagtccccaaggtataatct 642  Q
    |||| ||||| ||  || ||||||||||||||||||||| | ||||||||||||||||||||||||||||  | ||||||| ||||| |||||    
T  12738614 gtaatcgtcatagccagatgtgccattacaacggctctgcaaccctccacctctataaataggggactcatagcagtcccctaggtagaatct 12738522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 401 - 642
Target Start/End: Original strand, 24438491 - 24438733
Alignment:
Q  401 caaacaccacgtttgacaaaattactcgcgacacacccctcccatgcgagggggtg--cacggaacgaaagagaccggttcaaacgaaacccaacgtctc 498  Q
    |||||||||| |||| | |  ||||| || |||||||||| ||| || ||||||||  |||||   ||||||||  |||||||||||| | || ||||||    
T  24438491 caaacaccacatttggctatgttacttgcaacacaccccttccacgcaagggggtgtgcacggggagaaagagattggttcaaacgaaccacatcgtctc 24438590  T
Q  499 tttccacattcctgcaataaactcacaggcggttacacttcccacaatttcgtaaccgtcagagtaaggtgtgccattacaacggctctgtagccctcca 598  Q
    ||| ||| |||||||||| |||||   |||||||||||||||||| ||||||||||||  ||||  ||||||| |||||||||| ||||| |  |||| |    
T  24438591 tttgcacgttcctgcaatcaactctatggcggttacacttcccacgatttcgtaaccgcaagagccaggtgtgtcattacaacgactctgcaatcctcta 24438690  T
Q  599 cctctataaataggggactcaatgtagtccccaaggtataatct 642  Q
    |||||||||||||||||||||  | ||| |||||||||||||||    
T  24438691 cctctataaataggggactcacagcagt-cccaaggtataatct 24438733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 470 - 636
Target Start/End: Original strand, 19860052 - 19860218
Alignment:
Q  470 agaccggttcaaacgaaacccaacgtctctttccacattcctgcaataaactcacaggcggttacacttcccacaatttcgtaaccgtcagagtaaggtg 569  Q
    |||| |||||||||||| | ||||||||||   ||  ||||  |||||| ||| | || ||||||||||||||| |||||||||||| |||||  |||||    
T  19860052 agactggttcaaacgaaccgcaacgtctctcaacatgttcccacaataatctctctggtggttacacttcccacgatttcgtaaccgccagagccaggtg 19860151  T
Q  570 tgccattacaacggctctgtagccctccacctctataaataggggactcaatgtagtccccaaggta 636  Q
    | ||||||||||||||| | ||||||||||||||||||||||||||||||  | |||||||||||||    
T  19860152 tcccattacaacggctccgcagccctccacctctataaataggggactcacagcagtccccaaggta 19860218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 339 - 618
Target Start/End: Original strand, 15349496 - 15349777
Alignment:
Q  339 tgttctggaccggccaaaaggatctttgatccatttatttaggctcaataccatctaaaacccaaacaccacgtttgacaaaattactcgcgacacaccc 438  Q
    ||||||||||||| |||||||||||| |  || |||| |||||| | |||| ||| |||   ||||||||| ||||| ||| |||||| || ||||||||    
T  15349496 tgttctggaccggtcaaaaggatcttaggcccgtttacttaggcccgatacaatccaaagatcaaacaccatgtttggcaatattacttgcaacacaccc 15349595  T
Q  439 ctcccatgcg-agggggtgcacggaacgaaagagaccggttcaaa-cgaaacccaacgtctctttccacattcctgcaataaactcacaggcggttacac 536  Q
     |||   ||| ||||||||||| || |     ||||||||||||| |||| | |||| ||||||| ||| ||||  |||||| ||| |  ||||||||||    
T  15349596 ttccatcgcggagggggtgcacagagcatgcaagaccggttcaaaacgaaccacaacatctctttgcacgttcccacaataatctctctcgcggttacac 15349695  T
Q  537 ttcccacaatttcgtaaccgtcagagtaaggtgtgccattacaacggctctgtagccctccacctctataaataggggactc 618  Q
    ||||||| |||||||||||| ||||   |||||||| || |||||||||||| ||||||||||||||||| |||||||||||    
T  15349696 ttcccacgatttcgtaaccgccagacccaggtgtgctatcacaacggctctgcagccctccacctctatatataggggactc 15349777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 337 - 636
Target Start/End: Original strand, 15369490 - 15369791
Alignment:
Q  337 attgttctggaccggccaaaaggatctttgatccatttatttaggctcaataccatctaaaacccaaacaccacgtttgacaaaattactcgcgacacac 436  Q
    |||||||||||||||||||||||||||| |   |||||| ||| || |||||  ||| ||| | ||||||||||||||| ||| ||| || || ||||||    
T  15369490 attgttctggaccggccaaaaggatcttaggcgcatttacttaagcccaatataatccaaagctcaaacaccacgtttggcaatattccttgcaacacac 15369589  T
Q  437 ccctcccatgcgaggg-ggtgcacggaacgaaagagaccggttcaaa-cgaaacccaacgtctctttccacattcctgcaataaactcacaggcggttac 534  Q
    || |||   |||| || |||||| ||| |  |  ||||||||||||| |||| | |||| ||||||| ||| |||| ||||||| ||  | |||||||||    
T  15369590 ccttccttcgcgaaggcggtgcaaggagcatacaagaccggttcaaaacgaaccacaacttctctttgcacgttcccgcaataatctgtctggcggttac 15369689  T
Q  535 acttcccacaatttcgtaaccgtcagagtaaggtgtgccattacaacggctctgtagccctccacctctataaataggggactcaatgtagtccccaagg 634  Q
    |||||| ||||||||||||||| ||||   |||||| |||| | |||| ||||  ||||||||||||||||| |||| ||||||   | |||||||||||    
T  15369690 acttcctacaatttcgtaaccgccagacctaggtgtaccatcataacgactctacagccctccacctctatatatagaggactcttagcagtccccaagg 15369789  T
Q  635 ta 636  Q
    ||    
T  15369790 ta 15369791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 339 - 613
Target Start/End: Complemental strand, 3876649 - 3876374
Alignment:
Q  339 tgttctggaccggccaaaaggatctttgatccatttatttaggctcaataccatctaaaacccaaacaccacgtttgacaaaattactcgcgacacaccc 438  Q
    ||||||||||||||||||||||  || | ||||||||||||||| ||| ||  ||  || |||||||  |||||||| |||| ||||| | |||| ||||    
T  3876649 tgttctggaccggccaaaaggactttaggtccatttatttaggcccaacacagtcccaagcccaaacttcacgtttggcaaacttacttgtgacataccc 3876550  T
Q  439 ctcccatgcga-gggggtgcacggaacgaaagagaccggttcaaacgaaacccaacgtctctttccacattcctgcaataaactcacaggcggttacact 537  Q
    || |   |||| ||||||||||||| | |   ||| ||||||||| ||    |||||||||||| || ||||| ||||||| ||| | | || |||||||    
T  3876549 cttctccgcgaagggggtgcacggagcaagcaagatcggttcaaatgagctacaacgtctctttgcatattcccgcaataatctctctgacgattacact 3876450  T
Q  538 tcccacaatttcgtaaccgtcagagtaaggtgtgccattacaacggctctgtagccctccacctctataaataggg 613  Q
    ||| || |||||||||||| |||| | ||||||| | | |||||||||||| ||||||||||||||||| ||||||    
T  3876449 tcctacgatttcgtaaccgccagacttaggtgtgtcttcacaacggctctgcagccctccacctctatatataggg 3876374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 480 - 641
Target Start/End: Original strand, 15318989 - 15319150
Alignment:
Q  480 aaacgaaacccaacgtctctttccacattcctgcaataaactcacaggcggttacacttcccacaatttcgtaaccgtcagagtaaggtgtgccattaca 579  Q
    ||||||| | |||| ||||||| ||| |||||||||||| ||| |  ||||||||||||||||| |||||||||||| ||||   |||||| |||| |||    
T  15318989 aaacgaaccacaacttctctttgcacgttcctgcaataatctctctagcggttacacttcccacgatttcgtaaccgccagacctaggtgtaccatcaca 15319088  T
Q  580 acggctctgtagccctccacctctataaataggggactcaatgtagtccccaaggtataatc 641  Q
    ||| ||||| ||||||||||||||||| |||||| ||||   | ||||||||||||| ||||    
T  15319089 acgactctgcagccctccacctctatatatagggaactcttagcagtccccaaggtagaatc 15319150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 336 - 437
Target Start/End: Complemental strand, 27965058 - 27964957
Alignment:
Q  336 tattgttctggaccggccaaaaggatctttgatccatttatttaggctcaataccatctaaaacccaaacaccacgtttgacaaaattactcgcgacaca 435  Q
    ||||||| |||||| ||||||||||||||||  ||||||| |||||| ||||| |||| ||| |||||||||||||||||  ||||||||||||||| ||    
T  27965058 tattgttttggaccagccaaaaggatctttggcccatttacttaggcccaatatcatccaaagcccaaacaccacgtttggtaaaattactcgcgacgca 27964959  T
Q  436 cc 437  Q
    ||    
T  27964958 cc 27964957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 545 - 636
Target Start/End: Complemental strand, 18043464 - 18043373
Alignment:
Q  545 atttcgtaaccgtcagagtaaggtgtgccattacaacggctctgtagccctccacctctataaataggggactcaatgtagtccccaaggta 636  Q
    |||||||| ||| |||||| | | ||| ||||||||||||| || |||||||||||||||||||||||||||| |||| |||||||||||||    
T  18043464 atttcgtacccgccagagtcatgcgtgtcattacaacggctttgcagccctccacctctataaataggggactaaatgcagtccccaaggta 18043373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 341 - 440
Target Start/End: Complemental strand, 18043607 - 18043508
Alignment:
Q  341 ttctggaccggccaaaaggatctttgatccatttatttaggctcaataccatctaaaacccaaacaccacgtttgacaaaattactcgcgacacacccct 440  Q
    |||||||||||||||||||| |||||  ||||||| |||||| |||||||||  ||| |||||||| |||||||| |||| ||||| |||| ||||||||    
T  18043607 ttctggaccggccaaaaggacctttggcccatttacttaggcccaataccattcaaagcccaaacatcacgtttggcaaagttacttgcgatacacccct 18043508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 339 - 440
Target Start/End: Complemental strand, 23524351 - 23524250
Alignment:
Q  339 tgttctggaccggccaaaaggatctttgatccatttatttaggctcaataccatctaaaacccaaacaccacgtttgacaaaattactcgcgacacaccc 438  Q
    |||||||||||||||||| ||| |||||  ||||||| |||||  |||||| | | ||| ||||||||||||||||  |||| ||||| |||||||||||    
T  23524351 tgttctggaccggccaaagggacctttggcccatttacttaggtacaatacaacccaaagcccaaacaccacgttttgcaaagttacttgcgacacaccc 23524252  T
Q  439 ct 440  Q
    ||    
T  23524251 ct 23524250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 529 - 605
Target Start/End: Complemental strand, 23524204 - 23524128
Alignment:
Q  529 ggttacacttcccacaatttcgtaaccgtcagagtaaggtgtgccattacaacggctctgtagccctccacctctat 605  Q
    |||||||||| |||| ||||| |||||| |||||  |||||||||||||||| ||||||| |||||||||| |||||    
T  23524204 ggttacactttccacgatttcttaaccgccagagccaggtgtgccattacaatggctctgcagccctccacgtctat 23524128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 341 - 433
Target Start/End: Original strand, 19857705 - 19857797
Alignment:
Q  341 ttctggaccggccaaaaggatctttgatccatttatttaggctcaataccatctaaaacccaaacaccacgtttgacaaaattactcgcgaca 433  Q
    |||||||||| ||||||||| |||||   |||||| ||||||||||||| ||| ||| | ||||||||||||||| |||| ||| | ||||||    
T  19857705 ttctggaccgaccaaaaggacctttggcgcatttacttaggctcaatacaatccaaagctcaaacaccacgtttggcaaagttagttgcgaca 19857797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 520 - 556
Target Start/End: Original strand, 15933504 - 15933540
Alignment:
Q  520 ctcacaggcggttacacttcccacaatttcgtaaccg 556  Q
    ||||||||||||||||||||| || ||||||||||||    
T  15933504 ctcacaggcggttacacttcctacgatttcgtaaccg 15933540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 227; Significance: 1e-125; HSPs: 22)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 338 - 663
Target Start/End: Complemental strand, 25240026 - 25239700
Alignment:
Q  338 ttgttctggaccggccaaaaggatctttgatccatttatttaggctcaataccatctaaaacccaaacaccacgtttgacaaaattactcgcgacacacc 437  Q
    |||||||||||||||||||||||||||||  ||||||| |||||| ||||||  || ||| || ||||||||||||||||||||||||||||||||||||    
T  25240026 ttgttctggaccggccaaaaggatctttggcccatttacttaggcccaatacactccaaagcctaaacaccacgtttgacaaaattactcgcgacacacc 25239927  T
Q  438 cctcccatgcgaggggg-tgcacggaacgaaagagaccggttcaaacgaaacccaacgtctctttccacattcctgcaataaactcacaggcggttacac 536  Q
     ||  || ||||||||| ||||||||||||||||||| |||||||||||| ||||| |||||||||||| |||| |||||||||||||||||||||||||    
T  25239926 tctttcacgcgaggggggtgcacggaacgaaagagactggttcaaacgaaccccaaagtctctttccacgttcccgcaataaactcacaggcggttacac 25239827  T
Q  537 ttcccacaatttcgtaaccgtcagagtaaggtgtgccattacaacggctctgtagccctccacctctataaataggggactcaatgtagtccccaaggta 636  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||| |||||||||||||    
T  25239826 ttcccacaatttcgtaaccgtcagagtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactaaatgcagtccccaaggta 25239727  T
Q  637 taatctttctttctctaaaaccctcac 663  Q
     ||||||||||||||| ||||||||||    
T  25239726 gaatctttctttctctcaaaccctcac 25239700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 339 - 663
Target Start/End: Complemental strand, 13861644 - 13861319
Alignment:
Q  339 tgttctggaccggccaaaaggatctttgatccatttatttaggctcaataccatctaaaacccaaacaccacgtttgacaaaattactcgcgacacaccc 438  Q
    |||||||||||||||||||||||||||||  |||||| |||||| |||||||||| ||| |||||||||||||| ||  |||||||||||||||||||||    
T  13861644 tgttctggaccggccaaaaggatctttgactcatttacttaggcccaataccatccaaagcccaaacaccacgtctggtaaaattactcgcgacacaccc 13861545  T
Q  439 ctcccatgcgaggggg-tgcacggaacgaaagagaccggttcaaacgaaacccaacgtctctttccacattcctgcaataaactcacaggcggttacact 537  Q
    || ||| ||||||||| |||||||||||||||| ||||||||||||||| |||||||||||||||||| |||| ||||||||||||||||| ||||||||    
T  13861544 cttccacgcgaggggggtgcacggaacgaaagataccggttcaaacgaaccccaacgtctctttccacgttcccgcaataaactcacaggcagttacact 13861445  T
Q  538 tcccacaatttcgtaaccgtcagagtaaggtgtgccattacaacggctctgtagccctccacctctataaataggggactcaatgtagtccccaaggtat 637  Q
    |||||| |||||||||| || ||||||||||||||||||||||||||| || |||||||||||||||||||||||| |||||||| |||||||||||||     
T  13861444 tcccacgatttcgtaactgttagagtaaggtgtgccattacaacggctttgcagccctccacctctataaatagggaactcaatgcagtccccaaggtag 13861345  T
Q  638 aatctttctttctctaaaaccctcac 663  Q
    ||||||||||  ||| ||||||||||    
T  13861344 aatctttcttcttctcaaaccctcac 13861319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 178; E-Value: 1e-95
Query Start/End: Original strand, 399 - 663
Target Start/End: Original strand, 17282419 - 17282684
Alignment:
Q  399 cccaaacaccacgtttgacaaaattactcgcgacacacccctcccatgcgagggg-gtgcacggaacgaaagagaccggttcaaacgaaacccaacgtct 497  Q
    |||| |||||||||||| |||||||||||||||||||||||| ||| |||||||| |||||||||||||||||||| ||||| |||||| ||||||||||    
T  17282419 cccagacaccacgtttggcaaaattactcgcgacacaccccttccacgcgaggggggtgcacggaacgaaagagactggttctaacgaaccccaacgtct 17282518  T
Q  498 ctttccacattcctgcaataaactcacaggcggttacacttcccacaatttcgtaaccgtcagagtaaggtgtgccattacaacggctctgtagccctcc 597  Q
    |||||||| |||| ||||||||| |||| ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  17282519 ctttccacgttcccgcaataaacccacaagcggttacacttcccacgaattcgtaaccgtcagagtaaggtgtgccattacaacggctctgcagccctcc 17282618  T
Q  598 acctctataaataggggactcaatgtagtccccaaggtataatctttctttctctaaaaccctcac 663  Q
    ||||||||||||||||||||||||| ||||||||||||| || ||||| | |||| ||||||||||    
T  17282619 acctctataaataggggactcaatgcagtccccaaggtagaacctttcctcctctcaaaccctcac 17282684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 338 - 642
Target Start/End: Complemental strand, 12885611 - 12885307
Alignment:
Q  338 ttgttctggaccggccaaaaggatctttgatccatttatttaggctcaataccatctaaaacccaaacaccacgtttgacaaaattactcgcgacacacc 437  Q
    ||||| |||||||||||||||||  ||||| ||||||| |||||| |||||| ||| ||||||||||||||||||||| |||| ||||| || ||| |||    
T  12885611 ttgttttggaccggccaaaaggacttttgacccatttacttaggcccaatacaatccaaaacccaaacaccacgtttggcaaagttacttgcaacatacc 12885512  T
Q  438 cctcccatgcgagggggtgcacggaacgaaagagaccggttcaaacgaaacccaacgtctctttccacattcctgcaataaactcacaggcggttacact 537  Q
    ||| ||  || |||||||||| ||| |||||||||| |||||||||||| | |||||||||||| ||| |||| ||||||||||| | ||||||||||||    
T  12885511 ccttccccgcaagggggtgcatggagcgaaagagactggttcaaacgaaccacaacgtctctttgcacgttcccgcaataaactctctggcggttacact 12885412  T
Q  538 tcccacaatttcgtaaccgtcagagtaaggtgtgccattacaacggctctgtagccctccacctctataaataggggactcaatgtagtccccaaggtat 637  Q
    |||||| |||||||||||| |||||  |||||||||||||||| ||||||| |||||||||||| |||||||||||||||||    |||||||||||||     
T  12885411 tcccacgatttcgtaaccgccagagccaggtgtgccattacaatggctctgcagccctccacctttataaataggggactcacaacagtccccaaggtag 12885312  T
Q  638 aatct 642  Q
    |||||    
T  12885311 aatct 12885307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 338 - 619
Target Start/End: Original strand, 10985582 - 10985863
Alignment:
Q  338 ttgttctggaccggccaaaaggatctttgatccatttatttaggctcaataccatctaaaacccaaacaccacgtttgacaaaattactcgcgacacacc 437  Q
    |||||||||||||| |||||||| |||||  ||||||| |||||| |||||| ||| |||   ||||||||||||||| |||| ||||| | ||||||||    
T  10985582 ttgttctggaccgggcaaaaggacctttggcccatttacttaggcccaatacaatccaaaggtcaaacaccacgtttggcaaagttacttgtgacacacc 10985681  T
Q  438 cctcccatgcgagggggtgcacggaacgaaagagaccggttcaaacgaaacccaacgtctctttccacattcctgcaataaactcacaggcggttacact 537  Q
    | | ||   | ||||||||||| || |||| ||||| |||||||||||| | |||||||||| | ||| |||| ||||||||||| | ||||||||||||    
T  10985682 ctttccccacaagggggtgcacagagcgaacgagactggttcaaacgaaccacaacgtctctctgcacgttcccgcaataaactctctggcggttacact 10985781  T
Q  538 tcccacaatttcgtaaccgtcagagtaaggtgtgccattacaacggctctgtagccctccacctctataaataggggactca 619  Q
    |||||| ||||||||||||  ||||  |||||||||||||||||||||||| |||| |||||||||||||||||||||||||    
T  10985782 tcccacgatttcgtaaccgcgagagccaggtgtgccattacaacggctctgcagccatccacctctataaataggggactca 10985863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 339 - 642
Target Start/End: Complemental strand, 3268665 - 3268361
Alignment:
Q  339 tgttctggaccggccaaaaggatctttgatccatttatttaggctcaataccatctaaaacccaaacaccacgtttgacaaaattactcgcgacacaccc 438  Q
    ||||| |||||||||||||||| |||||  ||||||| |||||||||| || ||| | | ||||||||||   |||| |||||||||| | |||||||||    
T  3268665 tgttcgggaccggccaaaaggacctttggcccatttacttaggctcaaaacaatccacagcccaaacaccgattttggcaaaattacttgtgacacaccc 3268566  T
Q  439 ctcccatgcgaggggg-tgcacggaacgaaagagaccggttcaaacgaaacccaacgtctctttccacattcctgcaataaactcacaggcggttacact 537  Q
    || |||  | |||||| |||||||| ||| |||||| |||||||||||| | |||||||||| | ||| |||| |||||||||||   ||||||||||||    
T  3268565 cttccacacaaggggggtgcacggagcgacagagactggttcaaacgaaccacaacgtctctctgcacgttcccgcaataaactctatggcggttacact 3268466  T
Q  538 tcccacaatttcgtaaccgtcagagtaaggtgtgccattacaacggctctgtagccctccacctctataaataggggactcaatgtagtccccaaggtat 637  Q
    |||||| ||| |||||||| |||||  ||||||| |||||||| ||||||| ||||||||||||||||||||||||||||||  | |||| ||||||||     
T  3268465 tcccacgattacgtaaccgccagagccaggtgtgtcattacaatggctctgcagccctccacctctataaataggggactcacggaagtctccaaggtag 3268366  T
Q  638 aatct 642  Q
    |||||    
T  3268365 aatct 3268361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 339 - 642
Target Start/End: Complemental strand, 12217885 - 12217588
Alignment:
Q  339 tgttctggaccggccaaaaggatctttgatccatttatttaggctcaataccatctaaaacccaaacaccacgtttgacaaaattactcgcgacacaccc 438  Q
    |||||||||| ||||||||||| |||||  ||||||| |||| |  ||||| ||| | | |||||||||| |||||  |||||||||| || ||||||||    
T  12217885 tgttctggactggccaaaaggacctttggcccatttacttagtcctaatacaatccacagcccaaacaccgcgtttagcaaaattacttgcaacacaccc 12217786  T
Q  439 ctcccatgcgagggggtgcacggaacgaaagagaccggttcaaacgaaacccaacgtctctttccacattcctgcaataaactcacaggcggttacactt 538  Q
    || |||  |  ||||||||||||| ||| |||||| |||||||||||| | |||||||||| | ||| |||||||||||||||| | |||||||||||||    
T  12217785 cttccacacatgggggtgcacggagcgacagagactggttcaaacgaaccacaacgtctctctgcacgttcctgcaataaactctctggcggttacactt 12217686  T
Q  539 cccacaatttcgtaaccgtcagagtaaggtgtgccattacaacggctctgtagccctccacctctataaataggggactcaatgtagtccccaaggtata 638  Q
    || || |||||||||||| |||||  ||||      |||||||||||||| ||||||||||||||||||||||||||||||    ||||||||||||| |    
T  12217685 cctacgatttcgtaaccgccagagccaggt------ttacaacggctctgcagccctccacctctataaataggggactcacgacagtccccaaggtaga 12217592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 339 - 618
Target Start/End: Original strand, 9901571 - 9901850
Alignment:
Q  339 tgttctggaccggccaaaaggatctttgatccatttatttaggctcaataccatctaaaacccaaacaccacgtttgacaaaattactcgcgacacaccc 438  Q
    ||||||||| ||| |||||||| |||    ||||||| ||||||||||||| ||| ||| | |||| | |||||||| ||| |||||| ||||||||||     
T  9901571 tgttctggatcggtcaaaaggagcttatgcccatttacttaggctcaatacaatcaaaagcgcaaatatcacgtttggcaatattacttgcgacacacct 9901670  T
Q  439 ctcccatgcgagggggtgcacggaacgaaagagaccggttcaaacgaaacccaacgtctctttccacattcctgcaataaactcacaggcggttacactt 538  Q
    || || ||| |||||||||||||| |||   ||| ||||||||| ||| | |||||||||| |  ||||||| ||||||| ||| |  |||||||||| |    
T  9901671 cttccctgcaagggggtgcacggagcgagctagatcggttcaaatgaaccacaacgtctctctggacattcccgcaataatctctctagcggttacacgt 9901770  T
Q  539 cccacaatttcgtaaccgtcagagtaaggtgtgccattacaacggctctgtagccctccacctctataaataggggactc 618  Q
    ||||| ||||||||||||||||||  |||||||||||||||||||||||| | ||||||||||||||| |||||||||||    
T  9901771 cccacgatttcgtaaccgtcagagccaggtgtgccattacaacggctctgcaaccctccacctctatatataggggactc 9901850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 339 - 663
Target Start/End: Original strand, 21332413 - 21332738
Alignment:
Q  339 tgttctggaccggccaaaaggatctttgatccatttatttaggctcaataccatctaaaacccaaacaccacgtttgacaaaattactcgcgacacaccc 438  Q
    |||||| || ||||||||| ||||||||  ||||||| |||||  |||||| ||  |||  |||||||| ||||||| |||| ||||| |||||||||||    
T  21332413 tgttctagatcggccaaaatgatctttggcccatttacttaggtccaatacaattcaaagtccaaacactacgtttggcaaagttacttgcgacacaccc 21332512  T
Q  439 ctc-ccatgcgagggggtgcacggaacgaaagagaccggttcaaacgaaacccaacgtctctttccacattcctgcaataaactcacaggcggttacact 537  Q
    ||  |||  | ||||||||||| || |||||||||| |||||||||||| | |||||||||| | ||| ||||  |||||||||  | |||||||| |||    
T  21332513 ctttccacacaagggggtgcacagagcgaaagagactggttcaaacgaaccacaacgtctctctacacgttcccacaataaactttctggcggttatact 21332612  T
Q  538 tcccacaatttcgtaaccgtcagagtaaggtgtgccattacaacggctctgtagccctccacctctataaataggggactcaatgtagtccccaaggtat 637  Q
    |||||  ||||||||| || |||||  |||||||||| ||||||||||||| |||||||||||||| |||||||||||||||| | |||  ||||||||     
T  21332613 tcccatgatttcgtaagcgccagagccaggtgtgccactacaacggctctgcagccctccacctctgtaaataggggactcaaagcagtttccaaggtag 21332712  T
Q  638 aatctttctttctctaaaaccctcac 663  Q
    ||||| ||| |  || ||||||||||    
T  21332713 aatctatctcttcctcaaaccctcac 21332738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 449 - 636
Target Start/End: Complemental strand, 3270766 - 3270579
Alignment:
Q  449 agggggtgcacggaacgaaagagaccggttcaaacgaaacccaacgtctctttccacattcctgcaataaactcacaggcggttacacttcccacaattt 548  Q
    |||||||||||||| | | |||||| |||||||||||| | |||||||||  | ||| |||| ||||||||||| |  ||||||||||||||||| ||||    
T  3270766 agggggtgcacggagcaacagagactggttcaaacgaaccacaacgtctcactacacgttcccgcaataaactctctagcggttacacttcccacgattt 3270667  T
Q  549 cgtaaccgtcagagtaaggtgtgccattacaacggctctgtagccctccacctctataaataggggactcaatgtagtccccaaggta 636  Q
    |||||||  |||||  |||||||||||||||||||||||| ||||||||||||||||||||||||||||||  | |||||||||||||    
T  3270666 cgtaaccaccagagccaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcacggcagtccccaaggta 3270579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 339 - 588
Target Start/End: Original strand, 16396135 - 16396385
Alignment:
Q  339 tgttctggaccggccaaaaggatctttgatccatttatttaggctcaataccatctaaaacccaaacaccacgtttgacaaaattactcgcgacacaccc 438  Q
    ||||||||||||||||||||||||||||  ||||||| |||||| |||||| ||| ||| || |||||||||||||| |||| ||||| |||||||||||    
T  16396135 tgttctggaccggccaaaaggatctttggcccatttacttaggcccaatacaatccaaagccaaaacaccacgtttggcaaagttacttgcgacacaccc 16396234  T
Q  439 c--tcccatgcgagggggtgcacggaacgaaagagaccggttcaaacgaaacccaacgtctctttccacattcctgcaataaactcacaggcggttacac 536  Q
    |  |||||   | ||||||||||||| | |  ||||| ||||||| |||| | |||||||||| | ||| |||| ||||||||| | | |||||||||||    
T  16396235 ctttcccacaag-gggggtgcacggagcaagcgagactggttcaagcgaaccacaacgtctctctacacgttcccgcaataaacactctggcggttacac 16396333  T
Q  537 ttcccacaatttcgtaaccgtcagagtaaggtgtgccattacaacggctctg 588  Q
    ||||||  ||||| ||| || |||||| |||||||||| |||||||||||||    
T  16396334 ttcccatgatttcctaatcgccagagtcaggtgtgccactacaacggctctg 16396385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 339 - 606
Target Start/End: Complemental strand, 45313476 - 45313209
Alignment:
Q  339 tgttctggaccggccaaaaggatctttgatccatttatttaggctcaataccatctaaaacccaaacaccacgtttgacaaaattactcgcgacacaccc 438  Q
    |||||||||||||||||||||| |||||| ||||||| |||||| |||||| ||  ||| ||||| ||||| ||||| ||| |||||| |||||||||||    
T  45313476 tgttctggaccggccaaaaggaactttgacccatttacttaggcccaatacaattcaaagcccaagcaccatgtttggcaacattacttgcgacacaccc 45313377  T
Q  439 ctcccatgcgagggggtgcacggaacga-aagagaccggttcaaacgaaacccaacgtctctttccacattcctgcaataaactcacaggcggttacact 537  Q
    || |   ||||| ||||||||||| |||  | |||| ||||||||||||   |||||||||| | ||| ||||  |||||| ||| | ||||||||||||    
T  45313376 cttctccgcgagagggtgcacggagcgagcaaagactggttcaaacgaactacaacgtctctctgcacgttcc-ccaataatctctctggcggttacact 45313278  T
Q  538 tcccacaatttcgtaaccgtcagagtaaggtgtgccattacaacggctctgtagccctccacctctata 606  Q
    |||||| |||||||||||| |||||   |||||||||||||||||| | || | ||||| |||||||||    
T  45313277 tcccacgatttcgtaaccgccagagcctggtgtgccattacaacggatttgcaaccctctacctctata 45313209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 336 - 642
Target Start/End: Original strand, 26780681 - 26780988
Alignment:
Q  336 tattgttctggaccggccaaaaggatctttgatccatttatttaggctcaataccatctaaaacccaaacaccacgtttgacaaaattactcgcgacaca 435  Q
    |||||||||||||||||||||||||  ||||  |||||||  ||||| |||||| ||  ||| ||||||||||||||||| ||| |||||| || |||||    
T  26780681 tattgttctggaccggccaaaaggagttttggcccatttacataggcccaatactattcaaagcccaaacaccacgtttggcaacattacttgctacaca 26780780  T
Q  436 cccctcccatgcgaggggg-tgcacggaacgaaagagaccggttcaaacgaaacccaacgtctctttccacattcctgcaataaactcacaggcggttac 534  Q
    ||||| |  || ||||||| || | |||  |||  || |||| ||||||||| | |||||| ||| | ||| |||| ||||||| ||| | |||||||||    
T  26780781 ccccttctctgtgaggggggtgtagggagagaacaaggccggctcaaacgaaccacaacgtttctctgcacgttcccgcaataatctctctggcggttac 26780880  T
Q  535 acttcccacaatttcgtaaccgtcagagtaaggtgtgccattacaacggctctgtagccctccacctctataaataggggactcaatgtagtccccaagg 634  Q
    |||||||||  ||||||||||  ||||||  |||||| |||||||||||||||| |||||||||||||| |  |||||||| |||    |||||||||||    
T  26780881 acttcccacgttttcgtaaccaccagagtctggtgtgtcattacaacggctctgcagccctccacctctctgtataggggagtcataacagtccccaagg 26780980  T
Q  635 tataatct 642  Q
    || |||||    
T  26780981 tagaatct 26780988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 339 - 497
Target Start/End: Original strand, 18284484 - 18284643
Alignment:
Q  339 tgttctggaccggccaaaaggatctttgatccatttatttaggctcaataccatctaaaacccaaacaccacgtttgacaaaattactcgcgacacaccc 438  Q
    |||| |||||||||||||||||||||||  ||||||| |||||| |||||||||| ||| |||||||| |||||||| ||||||||||| ||||||||||    
T  18284484 tgttatggaccggccaaaaggatctttggcccatttaattaggcccaataccatccaaagcccaaacatcacgtttggcaaaattactcacgacacaccc 18284583  T
Q  439 ctcccatgcgagggg-gtgcacggaacgaaagagaccggttcaaacgaaacccaacgtct 497  Q
    || ||| |||||||| ||||||  || ||||||||| || ||||||||| ||||||||||    
T  18284584 cttccacgcgaggggagtgcacaaaatgaaagagactgggtcaaacgaaccccaacgtct 18284643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 391 - 632
Target Start/End: Complemental strand, 49402972 - 49402729
Alignment:
Q  391 atctaaaacccaaacaccacgtttgacaaaattactcgcgacacacccctcccatgcgagggggtgcacggaacgaaagagaccggttcaaacgaaaccc 490  Q
    ||||||| |||||| ||||| |||| ||  ||||||  |||||||||||| || ||||||||||||||| || | |   ||||||||||||||| |   |    
T  49402972 atctaaagcccaaataccacttttggcagcattacttacgacacaccccttccctgcgagggggtgcacagagcaagcaagaccggttcaaacggactac 49402873  T
Q  491 aacgtctctttc--cacattcctgcaataaactcacaggcggttacacttcccacaatttcgtaaccgtcagagtaaggtgtgccattacaacggctctg 588  Q
    ||||||||| ||  ||| || | ||||||| |||   ||||||||||||| |||| || ||||||||| |||||   |||||||||||||||||||||||    
T  49402872 aacgtctctctctgcacgtttccgcaataatctctatggcggttacactttccacgatctcgtaaccgccagagcctggtgtgccattacaacggctctg 49402773  T
Q  589 tagccctccacctctataaataggggactcaatgtagtccccaa 632  Q
     ||||||||||||||||| ||||||||||||  | |||||||||    
T  49402772 cagccctccacctctatatataggggactcatagcagtccccaa 49402729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 339 - 655
Target Start/End: Complemental strand, 28892243 - 28891921
Alignment:
Q  339 tgttctggaccggccaaaaggatctttgatccatttatttaggctcaataccatctaaaacccaaacaccacgtttgacaaaattactcgcgacacaccc 438  Q
    ||||||||||||| |||||||||||| | ||||||||||||||| |||||| |||||||   ||||||||||||||| ||| |||||| |||||| ||||    
T  28892243 tgttctggaccggtcaaaaggatcttaggtccatttatttaggcccaatacaatctaaagttcaaacaccacgtttgccaacattacttgcgacataccc 28892144  T
Q  439 ctcccatgcg-agggggtgcacggaacgaaagagaccggttcaaacgaaacccaacgtctctttccacattcctgcaataaactcacaggcggttacact 537  Q
    || |   ||| |||| ||||||||| | |   ||||| ||||||||||| | |||||||||||| ||| || |  |||| |  || | || |||||||||    
T  28892143 cttctccgcgaagggagtgcacggagcaagcaagacctgttcaaacgaaccacaacgtctctttgcacgtttccacaattatttctctggtggttacact 28892044  T
Q  538 tcccacaatttcgtaaccgtca----gagtaaggtgtgccattacaacggctctgtagccctccacctctataaataggggactcaatgtagtccccaag 633  Q
    |||||| |||||| ||| | ||    ||   || |||||||||||||||||| || ||| ||||||||||||| |||||||||||     ||||||||||    
T  28892043 tcccacgatttcgcaactgccaaccggacccagatgtgccattacaacggctatgcagctctccacctctatatataggggactcttaagagtccccaag 28891944  T
Q  634 gtataatct-ttctttctctaaa 655  Q
    ||| ||||| ||||| |||||||    
T  28891943 gtagaatctattcttcctctaaa 28891921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 339 - 655
Target Start/End: Complemental strand, 8082375 - 8082057
Alignment:
Q  339 tgttctggaccggccaaaaggatctttgatccatttatttaggctcaataccatctaaaacccaaacaccacgtttgacaaaattactcgcgacacaccc 438  Q
    |||||||||||| ||||||||||||| |  ||||| | |||||| |||||| ||| ||| ||||||||||||||||  ||| |||||| |||||  ||||    
T  8082375 tgttctggaccgtccaaaaggatcttaggcccattcacttaggcccaatacaatccaaagcccaaacaccacgttttgcaacattacttgcgacttaccc 8082276  T
Q  439 ctcccatgcga-gggggtgcacggaacgaaagagaccggttcaaacgaaacccaacgtctctttccacattcctgcaataaactcacaggcggttacact 537  Q
    ||     |||| ||||||||||||| | |    |||||||||||||||  |  ||| ||| ||| ||| |||| ||||| |  || | ||||||||||||    
T  8082275 cttttccgcgaagggggtgcacggagcaagcaggaccggttcaaacgagccataacatctatttgcacgttcccgcaattatttctctggcggttacact 8082176  T
Q  538 tcccacaatttcgtaaccgtcagagtaaggtgtgccattacaacggctctgtagccctccacctctataaataggggactcaatgtagtccccaaggtat 637  Q
    | |||| |||||||||| ||  ||   |||||||||||||||| ||||||| || |||||||||||||| |||||||||||   | ||||||||| |||     
T  8082175 ttccacgatttcgtaactgttggacccaggtgtgccattacaatggctctgcagtcctccacctctatatataggggactcttagcagtccccaatgtag 8082076  T
Q  638 aatct-ttctttctctaaa 655  Q
    |||||  ||||||||||||    
T  8082075 aatctactctttctctaaa 8082057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 491 - 642
Target Start/End: Original strand, 34845478 - 34845630
Alignment:
Q  491 aacgtctctttcc-acattcctgcaataaactcacaggcggttacacttcccacaatttcgtaaccgtcagagtaaggtgtgccattacaacggctctgt 589  Q
    ||||||||||||| ||||||| ||||  | ||||| |||||||||||||||||| |||||||||||||||||   | |||||||||||||||| |||||     
T  34845478 aacgtctctttcccacattcccgcaaatatctcaccggcggttacacttcccacgatttcgtaaccgtcagacacatgtgtgccattacaacgactctgc 34845577  T
Q  590 agccctccacctctataaataggggactcaatgtagtccccaaggtataatct 642  Q
    |  |  ||||||||||| | ||||| |||   | ||||||||||||| |||||    
T  34845578 attcacccacctctatataaagggggctcctcgcagtccccaaggtagaatct 34845630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 370 - 499
Target Start/End: Original strand, 26778764 - 26778894
Alignment:
Q  370 catttatttaggctcaataccatctaaaacccaaacaccacgtttgacaaaattactcgcgacacacccctcccatgcga-gggggtgcacggaacgaaa 468  Q
    |||||| ||||||||||||| ||  ||| | ||||||||| ||||||||| |||||| ||||| ||||||| |   |||| ||||||||||  | ||||     
T  26778764 catttacttaggctcaatactattcaaagctcaaacaccatgtttgacaacattacttgcgacccaccccttctccgcgaggggggtgcacatagcgaac 26778863  T
Q  469 gagaccggttcaaacgaaacccaacgtctct 499  Q
     ||||||||||||||||| | ||||||||||    
T  26778864 aagaccggttcaaacgaaccacaacgtctct 26778894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 604 - 655
Target Start/End: Original strand, 18284661 - 18284712
Alignment:
Q  604 ataaataggggactcaatgtagtccccaaggtataatctttctttctctaaa 655  Q
    ||||||||||||||||||| ||||||||||||| ||||| |||| |||||||    
T  18284661 ataaataggggactcaatgcagtccccaaggtagaatctctcttcctctaaa 18284712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 609 - 663
Target Start/End: Complemental strand, 10422106 - 10422052
Alignment:
Q  609 taggggactcaatgtagtccccaaggtataatctttctttctctaaaaccctcac 663  Q
    |||||||||||||| ||||||||||||| ||| |||||| ||| |||||||||||    
T  10422106 taggggactcaatgcagtccccaaggtagaatatttcttcctcaaaaaccctcac 10422052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 337 - 366
Target Start/End: Original strand, 17282371 - 17282400
Alignment:
Q  337 attgttctggaccggccaaaaggatctttg 366  Q
    ||||||||||||||||||||||||||||||    
T  17282371 attgttctggaccggccaaaaggatctttg 17282400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 225; Significance: 1e-123; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 225; E-Value: 1e-123
Query Start/End: Original strand, 339 - 663
Target Start/End: Complemental strand, 23495678 - 23495354
Alignment:
Q  339 tgttctggaccggccaaaaggatctttgatccatttatttaggctcaataccatctaaaacccaaacaccacgtttgacaaaattactcgcgacacaccc 438  Q
    |||| |||||||| ||||||||||||||| ||||||| |||||||||||| |||| ||| ||||||||||||||||  ||||||||||||||||||||||    
T  23495678 tgttttggaccgggcaaaaggatctttgacccatttacttaggctcaatatcatccaaagcccaaacaccacgttttgcaaaattactcgcgacacaccc 23495579  T
Q  439 ctcccatgcgagggggtgcacggaacgaaagagaccggttcaaacgaaacccaacgtctctttccacattcctgcaataaactcacaggcggttacactt 538  Q
    || ||| || |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||| ||||||||||||||| |||||||||||    
T  23495578 cttccacgcaagggggtgcacggaacgaaagagaccggttcaaacgaaccccaacgtctctttccacgttcccgcaataaactcacagacggttacactt 23495479  T
Q  539 cccacaatttcgtaaccgtcagagtaaggtgtgccattacaacggctctgtagccctccacctctataaataggggactcaatgtagtccccaaggtata 638  Q
    ||||| ||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||| ||| |    
T  23495478 cccacgatttcgtaaccgtcagagttaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaatgtaga 23495379  T
Q  639 atctttctttctctaaaaccctcac 663  Q
    |||| |||| |||||||||| ||||    
T  23495378 atctctcttcctctaaaaccttcac 23495354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 339 - 663
Target Start/End: Original strand, 20899465 - 20899790
Alignment:
Q  339 tgttctggaccggccaaaaggatctttgatccatttatttaggctcaataccatctaaaacccaaacaccacgtttgacaaaattactcgcgacacaccc 438  Q
    ||||||||||| ||||||||||||||||  ||||| | ||| || || ||||||| ||| |||||||||||||||||  |||||||||||||||||||||    
T  20899465 tgttctggaccagccaaaaggatctttggcccattcacttaagcccagtaccatccaaagcccaaacaccacgtttggaaaaattactcgcgacacaccc 20899564  T
Q  439 ctcccatgcgagggg-gtgcacggaacgaaagagaccggttcaaacgaaacccaacgtctctttccacattcctgcaataaactcacaggcggttacact 537  Q
    || ||| |||||||| |||||||||||||||||||| |||||||||||| |||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  20899565 cttccacgcgaggggggtgcacggaacgaaagagactggttcaaacgaaccccaacgtctctttccacgttcccgcaataaactcacaggcggttacact 20899664  T
Q  538 tcccacaatttcgtaaccgtcagagtaaggtgtgccattacaacggctctgtagccctccacctctataaataggggactcaatgtagtccccaaggtat 637  Q
    |||||| ||||||||||||||||||| ||||||||||||||||||  |||| |||||||||||| |||||||||||||||||||| ||||||||||||      
T  20899665 tcccacgatttcgtaaccgtcagagttaggtgtgccattacaacgaatctgcagccctccacctttataaataggggactcaatgcagtccccaaggttg 20899764  T
Q  638 aatctttctttctctaaaaccctcac 663  Q
    |||||||||| |||||||||||||||    
T  20899765 aatctttcttcctctaaaaccctcac 20899790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 338 - 663
Target Start/End: Original strand, 36712518 - 36712843
Alignment:
Q  338 ttgttctggaccggccaaaaggatctttgatccatttatttaggctcaataccatctaaaacccaaacaccacgtttgacaaaattactcgcgacacacc 437  Q
    ||||||| ||| ||| |||||||||||||| ||||||| |||||| ||||||  || ||| || |||||||||||||| ||||||||| |||||||||||    
T  36712518 ttgttctagactggctaaaaggatctttgacccatttacttaggcccaatacactccaaagcctaaacaccacgtttggcaaaattacccgcgacacacc 36712617  T
Q  438 cctcccatgcgagggggtgcacggaacgaaagagaccggttcaaacgaaacccaacgtctctttccacattcctgcaataaactcacaggcggttacact 537  Q
    ||| ||| || |||||||||||||||||||||||||  ||||||||||| |||||||||||||||||| |||  |||||||| || |||| |||||||||    
T  36712618 ccttccacgctagggggtgcacggaacgaaagagactagttcaaacgaaccccaacgtctctttccacgttctcgcaataaaatcgcaggtggttacact 36712717  T
Q  538 tcccacaatttcgtaaccgtcagagtaaggtgtgccattacaacggctctgtagccctccacctctataaataggggactcaatgtagtccccaaggtat 637  Q
    | |||| ||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||     
T  36712718 ttccacgatttcgtaaccgtcagagttaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaaggtag 36712817  T
Q  638 aatctttctttctctaaaaccctcac 663  Q
    |||||||||| |||| ||||||||||    
T  36712818 aatctttcttcctctcaaaccctcac 36712843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 399 - 660
Target Start/End: Original strand, 5590626 - 5590888
Alignment:
Q  399 cccaaacaccacgtttgacaaaattactcgcgacacacccctcccatgcgagg-gggtgcacggaacgaaagagaccggttcaaacgaaacccaacgtct 497  Q
    ||||||||||||||||| ||||||||||||||||| ||||||  || |||||| |||||||| ||||||||||||| |||||||||||| ||||||||||    
T  5590626 cccaaacaccacgtttggcaaaattactcgcgacagacccctttcacgcgaggagggtgcacagaacgaaagagactggttcaaacgaaccccaacgtct 5590725  T
Q  498 ctttccacattcctgcaataaactcacaggcggttacacttcccacaatttcgtaaccgtcagagtaaggtgtgccattacaacggctctgtagccctcc 597  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  5590726 ctttccacattcccgcaataaactcgcaggcggttacacttcccacaatttcgtaaccgtcagagtaaggtgtgccattacaacggctctgctgccctcc 5590825  T
Q  598 acctctataaataggggactcaatgtagtccccaaggtataatctttctttctctaaaaccct 660  Q
    |||||||||||||||||| |||||| ||||||||||||| |||||||||| |||| |||||||    
T  5590826 acctctataaataggggattcaatgcagtccccaaggtagaatctttcttcctctcaaaccct 5590888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 180; E-Value: 7e-97
Query Start/End: Original strand, 344 - 662
Target Start/End: Original strand, 33622365 - 33622686
Alignment:
Q  344 tggaccggccaaaaggatctttgatccatttatttaggctcaataccatctaaaacccaaacaccacgtttgacaaaattactcgcgacacacccctccc 443  Q
    |||||||||||||||||||||||| ||||||| ||| || |||||| ||| ||| |||||||| || ||||| |||||||||||||||||||||||| ||    
T  33622365 tggaccggccaaaaggatctttgacccatttacttaagcccaatacaatccaaagcccaaacatcatgtttggcaaaattactcgcgacacaccccttcc 33622464  T
Q  444 atgcgagggggtgcacggaacgaaagagaccggttcaaacgaaacccaacgtctctttccacattcctgcaataaactcacaggcggttacacttcccac 543  Q
    | | |||||||||||| ||||||||||||| |||| ||||||| ||||||||||||||| || |||| |||||||||||||||||||||||||||||||     
T  33622465 acgtgagggggtgcacagaacgaaagagactggtttaaacgaaccccaacgtctctttctacgttccagcaataaactcacaggcggttacacttcccag 33622564  T
Q  544 aatttcgta---accgtcagagtaaggtgtgccattacaacggctctgtagccctccacctctataaataggggactcaatgtagtccccaaggtataat 640  Q
     ||||||||   |||||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| ||| || |||    
T  33622565 gatttcgtaaccaccgtcagagtaaggtgtgtaattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccctaagatagaat 33622664  T
Q  641 ctttctttctctaaaaccctca 662  Q
     |||||| |||| |||||||||    
T  33622665 atttcttcctctcaaaccctca 33622686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 339 - 642
Target Start/End: Original strand, 28067893 - 28068196
Alignment:
Q  339 tgttctggaccggccaaaaggatctttgatccatttatttaggctcaataccatctaaaacc-caaacaccacgtttgacaaaattactcgcgacacacc 437  Q
    ||||||||||||||||||||||||||||| ||| ||| ||| || |||||| ||| |||| | ||| ||||||||||| |||| ||||| || ||||  |    
T  28067893 tgttctggaccggccaaaaggatctttgacccacttacttacgcccaatacaatccaaaagcacaagcaccacgtttggcaaacttacttgcaacacctc 28067992  T
Q  438 cctcccatgcgagggggtgcacggaacgaaagagaccggttcaaacgaaacccaacgtctctttccacattcctgcaataaactcacaggcggttacact 537  Q
    | |  |  || |||||||||||||| |||  ||||| |||||||||||  | |||||||||| | ||| |||||||||||||||| | ||||||||||||    
T  28067993 cttttcc-gcaagggggtgcacggagcgagcgagactggttcaaacgagcctcaacgtctctctgcacgttcctgcaataaactctccggcggttacact 28068091  T
Q  538 tcccacaatttcgtaaccgtcagagtaaggtgtgccattacaacggctctgtagccctccacctctataaataggggactcaatgtagtccccaaggtat 637  Q
    |||||| |||||||||||| |||||  |||||||||||||||||||||||| ||||||||||||||||||||||||||||||  | |||||| ||||||     
T  28068092 tcccacgatttcgtaaccgccagagccaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcatagcagtccctaaggtag 28068191  T
Q  638 aatct 642  Q
    |||||    
T  28068192 aatct 28068196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 339 - 553
Target Start/End: Complemental strand, 22510312 - 22510097
Alignment:
Q  339 tgttctggaccggccaaaaggatctttgatccatttatttaggctcaataccatctaaaacccaaacaccacgtttgacaaaattactcgcgacacaccc 438  Q
    ||||||||||||||||||||||||||||  ||||||| |||||| ||||||  | ||||   |||||||||||||||| |||||||| ||||||||||||    
T  22510312 tgttctggaccggccaaaaggatctttggcccatttacttaggcccaatacactataaagttcaaacaccacgtttgataaaattacccgcgacacaccc 22510213  T
Q  439 ctcccatgcgagg-gggtgcacggaacgaaagagaccggttcaaacgaaacccaacgtctctttccacattcctgcaataaactcacaggcggttacact 537  Q
    || ||| |||||| |||||||||||||||||||||| |||| |||||||  ||||||||||||||||  |||| ||||||||||||||||||||||||||    
T  22510212 cttccacgcgaggtgggtgcacggaacgaaagagactggttaaaacgaactccaacgtctctttccatgttcccgcaataaactcacaggcggttacact 22510113  T
Q  538 tcccacaatttcgtaa 553  Q
    |||||| |||||||||    
T  22510112 tcccacgatttcgtaa 22510097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 339 - 619
Target Start/End: Complemental strand, 5931521 - 5931240
Alignment:
Q  339 tgttctggaccggccaaaaggatctttgatccatttatttaggctcaataccatctaaaacccaaacaccacgtttgacaaaattactcgcgacacaccc 438  Q
    |||| ||||| ||||||||| | |||||  ||||||| |||||| |||||| ||| | |||||||||| | |||||| |||||||||| | |||||||||    
T  5931521 tgttatggactggccaaaagtacctttggcccatttacttaggcccaatacaatccacaacccaaacatcgcgtttggcaaaattacttgtgacacaccc 5931422  T
Q  439 ctcccatgcgaggggg-tgcacggaacgaaagagaccggttcaaacgaaacccaacgtctctttccacattcctgcaataaactcacaggcggttacact 537  Q
    || |||  | |||||| |||||||| ||| |||||| |||||||||||| | |||||||||| | |||||||| ||||||||||| | ||||||| ||||    
T  5931421 cttccacacaaggggggtgcacggagcgatagagactggttcaaacgaaccacaacgtctctctacacattcccgcaataaactctctggcggttgcact 5931322  T
Q  538 tcccacaatttcgtaaccgtcagagtaaggtgtgccattacaacggctctgtagccctccacctctataaataggggactca 619  Q
    |||||| ||||| |||||| ||||   ||||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  5931321 tcccacgatttcataaccgccagaaccaggtgtgtcattacaacggctctgcagccctccacctctataaataggggactca 5931240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 339 - 538
Target Start/End: Complemental strand, 13538060 - 13537860
Alignment:
Q  339 tgttctggaccggccaaaaggatctttgatccatttatttaggctcaataccatctaaaacccaaacaccacgtttgacaaaattactcgcgacacaccc 438  Q
    ||||||||||||  |||||| || |||| |||||||| |||||| |||||||||| ||| |||||||| |||||||| ||||||||||||||||||||||    
T  13538060 tgttctggaccgatcaaaagaatatttggtccatttacttaggcccaataccatccaaagcccaaacatcacgtttggcaaaattactcgcgacacaccc 13537961  T
Q  439 ctcccatgcga-gggggtgcacggaacgaaagagaccggttcaaacgaaacccaacgtctctttccacattcctgcaataaactcacaggcggttacact 537  Q
    || ||| |||| ||||||| |||||||||||||||| |||||||| ||| |||||||||||||||||| |||| ||||||||||||||| ||||||||||    
T  13537960 cttccacgcgaggggggtgtacggaacgaaagagactggttcaaatgaaccccaacgtctctttccacgttcccgcaataaactcacagccggttacact 13537861  T
Q  538 t 538  Q
    |    
T  13537860 t 13537860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 339 - 642
Target Start/End: Original strand, 15620061 - 15620364
Alignment:
Q  339 tgttctggaccggccaaaaggatctttgatccatttatttaggctcaataccatctaaaacccaaacaccacgtttgacaaaattactcgcgacacaccc 438  Q
    |||| |||| ||| ||||||||| ||||  | ||||||| ||||  ||||| ||| |||  |||||| |||||||||||||| ||||| || || |||||    
T  15620061 tgttatggatcgggcaaaaggatatttggcctatttattcaggcctaatacaatccaaagtccaaacgccacgtttgacaaacttacttgcaacgcaccc 15620160  T
Q  439 ctcccatgcgagggggtgcacggaacgaaagagaccggttcaaacgaaacccaacgtctctttccacattcctgcaataaactcacaggcggttacactt 538  Q
    || || ||| |||||||| ||||| |||  ||||| |||||||||||  | |||||||||| | ||| ||||  |||||||||| | |||||||||||||    
T  15620161 cttccttgcaagggggtgtacggagcgagcgagacgggttcaaacgagccacaacgtctctctgcacgttcccacaataaactctctggcggttacactt 15620260  T
Q  539 cccacaatttcgtaaccgtcagagtaaggtgtgccattacaacggctctgtagccctccacctctataaataggggactcaatgtagtccccaaggtata 638  Q
    ||||||||||||||||||||||||  | ||||||||||||||| |||||  |||||| |||||||||||||||||||||||  | ||||||||||||| |    
T  15620261 cccacaatttcgtaaccgtcagagccaagtgtgccattacaacagctctacagcccttcacctctataaataggggactcatagcagtccccaaggtaga 15620360  T
Q  639 atct 642  Q
    ||||    
T  15620361 atct 15620364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 339 - 663
Target Start/End: Complemental strand, 38608608 - 38608272
Alignment:
Q  339 tgttctggaccggccaaaaggatctttgatccatttatttaggctcaataccatctaaaacccaaacaccacgtttgacaaaa--ttactcgcgacacac 436  Q
    |||||||||||||||||||||| ||||||  |||||| ||||| ||||||| ||  |||   ||||| ||| ||||| | |||  |||||||||  ||||    
T  38608608 tgttctggaccggccaaaaggacctttgactcatttacttaggttcaatacaattcaaagttcaaactccatgtttggctaaactttactcgcggtacac 38608509  T
Q  437 ccctcccatgcgagggggtgcacggaacgaaagagaccggttcaaacgaaacccaacgtctctttccacattc---------ctgcaataaactcacagg 527  Q
    |||  | | ||||||||||||||| | | ||  |||||||||||||||||   | |||||||||| || ||||         | |||||||||||   ||    
T  38608508 cccctctacgcgagggggtgcacgaatcaaataagaccggttcaaacgaactacgacgtctctttgcatattctgcacgttcccgcaataaactctttgg 38608409  T
Q  528 cggttacacttcccacaatttcgtaaccgtcagagtaaggtgtgccattacaacggctctgtagccctccacctctataaataggggactcaatgtagtc 627  Q
    |||||||||||||||| |||||||||||| |||||  |||||||||   ||||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  38608408 cggttacacttcccacgatttcgtaaccgccagagccaggtgtgcctccacaacggctctgtagacctccacctctataaataggggactcaatgcagtc 38608309  T
Q  628 cccaaggtataatc-tttctttctctaaaaccctcac 663  Q
    || |||||| |||| |||||  |||||||||||||||    
T  38608308 cctaaggtagaatcttttctccctctaaaaccctcac 38608272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 339 - 619
Target Start/End: Complemental strand, 8244846 - 8244561
Alignment:
Q  339 tgttctggaccggccaaaaggatctttgatccatttatttaggctcaataccatctaaaacccaaacaccacgtttgacaaaattactcgcgacacaccc 438  Q
    ||||||||||||||||||||||  |||   ||||||| ||||||| ||||| ||| |||  | ||||||| | |||| |  | ||||| || ||||||||    
T  8244846 tgttctggaccggccaaaaggaattttagcccatttacttaggcttaatacaatccaaagtctaaacaccgcatttggctgagttacttgcaacacaccc 8244747  T
Q  439 ctcccatgcgagggggtgcacggaacgaaagagaccggttcaaacgaaacccaacgtctctttccacattcctgcaataaactcacaggcggttacactt 538  Q
    || ||| || |||||||||||||| |||||||||| |||||||||||| | |||||||||||| ||| ||||  |||||||||| |  ||| ||||||||    
T  8244746 cttccacgcaagggggtgcacggagcgaaagagactggttcaaacgaaccacaacgtctctttgcacgttcccccaataaactctctagcgattacactt 8244647  T
Q  539 cccacaatttcgtaaccgtcaga-----gtaa-ggtgtgccattacaacggctctgtagccctccacctctataaataggggactca 619  Q
     |||| |||||||||||| ||||     |||| | |||||||| || ||| ||||| ||||||||||||||||||||| ||||||||    
T  8244646 tccacgatttcgtaaccgccagagccatgtaatgatgtgccatcac-acgactctgcagccctccacctctataaataagggactca 8244561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 469 - 619
Target Start/End: Complemental strand, 42792681 - 42792531
Alignment:
Q  469 gagaccggttcaaacgaaacccaacgtctctttccacattcctgcaataaactcacaggcggttacacttcccacaatttcgtaaccgtcagagtaaggt 568  Q
    |||||||||||||||||  | |||||| ||| | ||| |||| ||||||||||| |  ||||||||||||||||| |||||||||||| |||||  ||||    
T  42792681 gagaccggttcaaacgagtcacaacgtatctctgcacgttcccgcaataaactctctagcggttacacttcccacgatttcgtaaccgccagagccaggt 42792582  T
Q  569 gtgccattacaacggctctgtagccctccacctctataaataggggactca 619  Q
    |||||| |||||| |||||| |||||||||||||||||| |||||||||||    
T  42792581 gtgccactacaactgctctgcagccctccacctctataactaggggactca 42792531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 512 - 619
Target Start/End: Original strand, 22922681 - 22922788
Alignment:
Q  512 gcaataaactcacaggcggttacacttcccacaatttcgtaaccgtcagagtaaggtgtgccattacaacggctctgtagccctccacctctataaatag 611  Q
    ||||||||||| | |||||||||||||||||| ||||||||||||  ||||  ||||||| || ||||||||||||||||||||||||||||||||||||    
T  22922681 gcaataaactctctggcggttacacttcccacgatttcgtaaccgctagagccaggtgtgtcactacaacggctctgtagccctccacctctataaatag 22922780  T
Q  612 gggactca 619  Q
    ||||||||    
T  22922781 gggactca 22922788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 369 - 597
Target Start/End: Original strand, 19329823 - 19330052
Alignment:
Q  369 ccatttatttaggctcaataccatctaaaacccaaacaccacgtttgacaaaattactcgcgacacacccctcccatgcgaggggg-tgcacggaacgaa 467  Q
    ||||||| |||||| |||||| ||  ||| |||||| |||||||||| ||| |||||| |||| ||| |||| || |||||||||| ||||||||  |||    
T  19329823 ccatttacttaggcccaatacaattcaaagcccaaataccacgtttggcaacattacttgcgagacatcccttccctgcgaggggggtgcacgga--gaa 19329920  T
Q  468 ag--agaccggttcaaacgaaacccaacgtctctttccacattcctgcaataaactcacaggcggttacacttcccacaatttcgtaaccgtcagagtaa 565  Q
    ||  ||||||||||||||||  | ||||||  || | ||  |||| ||||||| ||| | |||||||||||||||||| |||||||||||| |||||       
T  19329921 agcaagaccggttcaaacgagccacaacgttactctgcatgttcccgcaataatctctctggcggttacacttcccacgatttcgtaaccgccagagctt 19330020  T
Q  566 ggtgtgccattacaacggctctgtagccctcc 597  Q
    ||||||||||||||| ||||||||||||||||    
T  19330021 ggtgtgccattacaatggctctgtagccctcc 19330052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 349 - 609
Target Start/End: Original strand, 41037524 - 41037785
Alignment:
Q  349 cggccaaaaggatctttgatccatttatttaggctcaataccatctaaaacccaaacaccacgtttgacaaaattactcgcgacacacccctcccatgcg 448  Q
    |||||||||||| || ||| ||||||| |||| |||||||| ||| ||| ||||||||| ||| ||| |||| ||||| || ||||||| ||  |  ||     
T  41037524 cggccaaaaggacctatgacccatttacttagactcaatacaatccaaagcccaaacactacggttggcaaacttacttgcaacacaccactttccggca 41037623  T
Q  449 aggggg-tgcacggaacgaaagagaccggttcaaacgaaacccaacgtctctttccacattcctgcaataaactcacaggcggttacacttcccacaatt 547  Q
    |||||| |||||| | | |  ||||| |||||||| |||    ||| ||| | | ||| |||  ||||||||||| | |||||||||||||||||| |||    
T  41037624 aggggggtgcacgaagcaagcgagactggttcaaatgaacgataacatctgtctgcacgttcacgcaataaactctctggcggttacacttcccacgatt 41037723  T
Q  548 tcgtaaccgtcagagtaaggtgtgccattacaacggctctgtagccctccacctctataaat 609  Q
    ||||||||| |||||  |||||||||||||||||||||| | ||||||||||||||||||||    
T  41037724 tcgtaaccgccagagccaggtgtgccattacaacggctccgcagccctccacctctataaat 41037785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 526 - 619
Target Start/End: Original strand, 22922098 - 22922191
Alignment:
Q  526 ggcggttacacttcccacaatttcgtaaccgtcagagtaaggtgtgccattacaacggctctgtagccctccacctctataaataggggactca 619  Q
    |||||||||||||||||| |||| ||||||  |||||  ||||||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  22922098 ggcggttacacttcccacgattttgtaaccaccagagccaggtgtgtcactacaacggctctgtagccctccacctctataaataggggactca 22922191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 339 - 518
Target Start/End: Complemental strand, 24095523 - 24095343
Alignment:
Q  339 tgttctggaccggccaaaaggatctttgatccatttatttaggctcaataccatctaaaacccaaacaccacgtttgacaaaattactcgcgacacaccc 438  Q
    ||||||||||||||||||||||  ||||  |||| || |||||| |||||| ||| ||| |||||| |||||||||| |||  ||||| ||| |||||||    
T  24095523 tgttctggaccggccaaaaggagttttggcccatctacttaggcccaatacaatccaaagcccaaataccacgtttggcaacgttacttgcggcacaccc 24095424  T
Q  439 ctcccatgcgaggggg-tgcacggaacgaaagagaccggttcaaacgaaacccaacgtctctttccacattcctgcaataa 518  Q
    |  ||  ||||||||| |||||||| | |  ||||||||||||||| || |||||||||||||| ||| |||| |||||||    
T  24095423 cgtccgcgcgagggggatgcacggagcaagcgagaccggttcaaacaaaccccaacgtctctttgcacgttcccgcaataa 24095343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 213; Significance: 1e-116; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 339 - 662
Target Start/End: Original strand, 10741 - 11065
Alignment:
Q  339 tgttctggaccggccaaaaggatctttgatccatttatttaggctcaataccatctaaaacccaaacaccacgtttgacaaaattactcgcgacacaccc 438  Q
    ||||||||| ||||||||||||||||||  ||||| | |||||| |||||||||| ||| ||||||||||||||||| ||||||||||||||||||||||    
T  10741 tgttctggatcggccaaaaggatctttggcccattcacttaggcccaataccatccaaagcccaaacaccacgtttggcaaaattactcgcgacacaccc 10840  T
Q  439 ctcccatgcgagggg-gtgcacggaacgaaagagaccggttcaaacgaaacccaacgtctctttccacattcctgcaataaactcacaggcggttacact 537  Q
    || |||||||||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||||  |||| ||||||||||||||||||||||||||    
T  10841 cttccatgcgaggggagtgcaaggaacgaaagagaccggttcaaaagaaacccaacgtctctttccatgttcccgcaataaactcacaggcggttacact 10940  T
Q  538 tcccacaatttcgtaaccgtcagagtaaggtgtgccattacaacggctctgtagccctccacctctataaataggggactcaatgtagtccccaaggtat 637  Q
    |||||  ||||||||||||||||||| |||||||||||||||||||||||  |||||||||||| ||||||||| |||||||||| ||||||||||| |     
T  10941 tcccatgatttcgtaaccgtcagagttaggtgtgccattacaacggctctacagccctccacctttataaatagtggactcaatggagtccccaagggag 11040  T
Q  638 aatctttctttctctaaaaccctca 662  Q
    |||||||||| ||||||||||||||    
T  11041 aatctttcttcctctaaaaccctca 11065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 201; Significance: 1e-109; HSPs: 20)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 336 - 663
Target Start/End: Complemental strand, 18153462 - 18153134
Alignment:
Q  336 tattgttctggaccggccaaaaggatctttgatccatttatttaggctcaataccatctaaaacccaaacaccacgtttgacaaaattactcgcgacaca 435  Q
    |||||||||||||||||||||||||||||||  ||||||| |||||| ||||||  |  ||| ||||||||||| ||||| |||||||||||||||||||    
T  18153462 tattgttctggaccggccaaaaggatctttggcccatttacttaggcccaatacactacaaagcccaaacaccatgtttggcaaaattactcgcgacaca 18153363  T
Q  436 cccctcccatgcgaggggg-tgcacggaacgaaagagaccggttcaaacgaaacccaacgtctctttccacattcctgcaataaactcacaggcggttac 534  Q
    ||||| ||| ||||||||| |||||||||| |||||||| |||||||||||| |||||||||||||||||| ||||  |||||||||| |||||||||||    
T  18153362 ccccttccacgcgaggggggtgcacggaacaaaagagactggttcaaacgaaccccaacgtctctttccacgttcccacaataaactcgcaggcggttac 18153263  T
Q  535 acttcccacaatttcgtaaccgtcagagtaaggtgtgccattacaacggctctgtagccctccacctctataaataggggactcaatgtagtccccaagg 634  Q
    ||||||||| |||||||||||||||||||||| ||||||||||||||| ||| | ||||||||||||||||||||||||||||||||| | |||||||||    
T  18153262 acttcccaccatttcgtaaccgtcagagtaagctgtgccattacaacgactcggcagccctccacctctataaataggggactcaatgcattccccaagg 18153163  T
Q  635 tataatctttctttctctaaaaccctcac 663  Q
    || |||||||||| |||| ||||||||||    
T  18153162 tagaatctttcttcctctcaaaccctcac 18153134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 352 - 663
Target Start/End: Original strand, 47295564 - 47295875
Alignment:
Q  352 ccaaaaggatctttgatccatttatttaggctcaataccatctaaaacccaaacaccacgtttgacaaaattactcgcgacacacccctcccatgcgagg 451  Q
    |||||||||||||||| ||||||| |||||  ||||||  |  ||| |||||||||||||||||  ||||||||||||||||||||| | ||| ||||||    
T  47295564 ccaaaaggatctttgacccatttacttaggtccaatacactacaaagcccaaacaccacgtttggaaaaattactcgcgacacacccattccacgcgagg 47295663  T
Q  452 gggtgcacggaacgaaagagaccggttcaaacgaaacccaacgtctctttccacattcctgcaataaactcacaggcggttacacttcccacaatttcgt 551  Q
    |||||||||||||||| ||||| |||||||||||| |||||||||||| ||||| |||| |||||||||||||| ||| ||||||||||||| |||||||    
T  47295664 gggtgcacggaacgaaggagactggttcaaacgaaccccaacgtctctctccaccttcccgcaataaactcacaagcgtttacacttcccacgatttcgt 47295763  T
Q  552 aaccgtcagagtaaggtgtgccattacaacggctctgtagccctccacctctataaataggggactcaatgtagtccccaaggtataatctttctttctc 651  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| |||    
T  47295764 aaccgtcagagtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaaggtagaatctttcttcctc 47295863  T
Q  652 taaaaccctcac 663  Q
    | ||||||||||    
T  47295864 tcaaaccctcac 47295875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 338 - 663
Target Start/End: Original strand, 21592743 - 21593071
Alignment:
Q  338 ttgttctggaccggccaaaaggatctttgatccatttatttaggctcaataccatctaaaacccaaacaccacgtttgacaaaattactcgcgacacacc 437  Q
    ||||||||||||||||||||| |||||||  ||||| | |||||| |||||||||| |||  |||||||||| ||||| | |||||||||||||||||||    
T  21592743 ttgttctggaccggccaaaagaatctttggcccattcacttaggcccaataccatccaaagtccaaacaccatgtttggctaaattactcgcgacacacc 21592842  T
Q  438 cctcccatgcgagggg---gtgcacggaacgaaagagaccggttcaaacgaaacccaacgtctctttccacattcctgcaataaactcacaggcggttac 534  Q
    ||| ||| ||||||||   |||||||||||||||||||| |||||||||||| |||||||||||||||||| |||| | ||||| || |||| |||||||    
T  21592843 ccttccacgcgaggggggggtgcacggaacgaaagagactggttcaaacgaaccccaacgtctctttccacgttcccgtaataagctaacagacggttac 21592942  T
Q  535 acttcccacaatttcgtaaccgtcagagtaaggtgtgccattacaacggctctgtagccctccacctctataaataggggactcaatgtagtccccaagg 634  Q
    ||||||||| |||| ||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| |||||||||||    
T  21592943 acttcccacgattttgtaaccgtcagagtaaggtgtgccattacaacggctcagcagccctccacctctataaataggggactcaatgcagtccccaagg 21593042  T
Q  635 tataatctttctttctctaaaaccctcac 663  Q
    || || ||||||| |||||||||||||||    
T  21593043 tagaagctttcttcctctaaaaccctcac 21593071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 338 - 642
Target Start/End: Original strand, 30770056 - 30770359
Alignment:
Q  338 ttgttctggaccggccaaaaggatctttgatccatttatttaggctcaataccatctaaaacccaaacaccacgtttgacaaaattactcgcgacacacc 437  Q
    ||||||||||||||||||||||| |||||| ||||||| |||||| |||||| ||  ||| |||||||| |||||||||| || ||||| ||||||||||    
T  30770056 ttgttctggaccggccaaaaggacctttgaaccatttacttaggcccaatacaattcaaagcccaaacatcacgtttgacgaagttacttgcgacacacc 30770155  T
Q  438 cctcccatgcgagggggtgcacggaacgaaagagaccggttcaaacgaaacccaacgtctctttccacattcctgcaataaactcacaggcggttacact 537  Q
    ||| |||  | |||||||||||||| |||||| ||| |||||||||||| | |||||||||| | ||| |||| |||||||||||   ||| ||||||||    
T  30770156 ccttccacacaagggggtgcacggagcgaaagggactggttcaaacgaa-cacaacgtctctctacacgttcccgcaataaactctttggcagttacact 30770254  T
Q  538 tcccacaatttcgtaaccgtcagagtaaggtgtgccattacaacggctctgtagccctccacctctataaataggggactcaatgtagtccccaaggtat 637  Q
    | |||| |||||||||||| |||||  |||||||||||||||||||||||| ||| ||||||||||||||||||||||||||  | |||||||||||||     
T  30770255 ttccacgatttcgtaaccgccagagccaggtgtgccattacaacggctctgcagcactccacctctataaataggggactcacagcagtccccaaggtag 30770354  T
Q  638 aatct 642  Q
    |||||    
T  30770355 aatct 30770359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 339 - 636
Target Start/End: Complemental strand, 20093866 - 20093569
Alignment:
Q  339 tgttctggaccggccaaaaggatctttgatccatttatttaggctcaataccatctaaaacccaaacaccacgtttgacaaaattactcgcgacacaccc 438  Q
    ||||||| | ||||||||||||||||||| ||||||| |||||  |||||| ||| |||  |||||||||||||||| |||| ||||| || ||| ||||    
T  20093866 tgttctgaatcggccaaaaggatctttgacccatttacttaggtccaatacaatccaaagtccaaacaccacgtttgtcaaagttacttgcaacaaaccc 20093767  T
Q  439 ctcccatgcgagggggtgcacggaacgaaagagaccggttcaaacgaaacccaacgtctctttccacattcctgcaataaactcacaggcggttacactt 538  Q
    || |||  | || ||||||||||| ||| |||||| |||||||||||| | |||||||||| | |||||||| ||||||| |||   || ||||||||||    
T  20093766 cttccacacaagagggtgcacggagcgacagagactggttcaaacgaaccacaacgtctctctgcacattcccgcaataagctctttggtggttacactt 20093667  T
Q  539 cccacaatttcgtaaccgtcagagtaaggtgtgccattacaacggctctgtagccctccacctctataaataggggactcaatgtagtccccaaggta 636  Q
    ||||| ||||||||||||  || |  |||||||||||||||||||||||| ||||||||||||||||||||||||||||||  | |||||||||||||    
T  20093666 cccacgatttcgtaaccgctagggccaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcacggcagtccccaaggta 20093569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 462 - 663
Target Start/End: Complemental strand, 18185831 - 18185630
Alignment:
Q  462 aacgaaagagaccggttcaaacgaaacccaacgtctctttccacattcctgcaataaactcacaggcggttacacttcccacaatttcgtaaccgtcaga 561  Q
    |||||||||||| |||||||||||| |||||||||||||||||  |||| ||||||||||| || ||||||||||||||| | |||||||||||||||||    
T  18185831 aacgaaagagactggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcgcaagcggttacacttcccgcgatttcgtaaccgtcaga 18185732  T
Q  562 gtaaggtgtgccattacaacggctctgtagccctccacctctataaataggggactcaatgtagtccccaaggtataatctttctttctctaaaaccctc 661  Q
    |||||||||||| ||| |||||||||| |||||||||| | ||| |||||||||||||||| ||||||||  ||| |||||||||| |||| ||||||||    
T  18185731 gtaaggtgtgccgttaaaacggctctgcagccctccacatttattaataggggactcaatgcagtccccagcgtagaatctttcttcctctcaaaccctc 18185632  T
Q  662 ac 663  Q
    ||    
T  18185631 ac 18185630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 339 - 642
Target Start/End: Complemental strand, 29165178 - 29164876
Alignment:
Q  339 tgttctggaccggccaaaaggatctttgatccatttatttaggctcaataccatctaaaacccaaacaccacgtttgacaaaattactcgcgacacaccc 438  Q
    |||||||||||||||||| | |  ||||| |||||||||||||| |||||| | | ||| ||||||||||||||||| |||| ||||| | |||||||||    
T  29165178 tgttctggaccggccaaacg-acatttgacccatttatttaggcccaatacaacccaaagcccaaacaccacgtttggcaaagttacttgtgacacaccc 29165080  T
Q  439 ctcccatgcgagggggtgcacggaacgaaagagaccggttcaaacgaaacccaacgtctctttccacattcctgcaataaactcacaggcggttacactt 538  Q
    ||  |   | |||||||||||||| |||| ||||| |||||||||||| | |||||||||| | ||| |||| ||||||||||| |  || |||||||||    
T  29165079 ctttcccacaagggggtgcacggagcgaacgagactggttcaaacgaaccacaacgtctctctgcacgttcccgcaataaactctctagcagttacactt 29164980  T
Q  539 cccacaatttcgtaaccgtcagagtaaggtgtgccattacaacggctctgtagccctccacctctataaataggggactcaatgtagtccccaaggtata 638  Q
    ||||| ||||||||||    ||||| ||||||| |||||||||||||||| |||| |||||||||||||||||||||||||  | ||||||||||||| |    
T  29164979 cccacgatttcgtaacttctagagtcaggtgtgtcattacaacggctctgcagccgtccacctctataaataggggactcatagcagtccccaaggtaga 29164880  T
Q  639 atct 642  Q
    ||||    
T  29164879 atct 29164876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 336 - 619
Target Start/End: Complemental strand, 22705932 - 22705649
Alignment:
Q  336 tattgttctggaccggccaaaaggatctttgatccatttatttaggctcaataccatctaaaacccaaacaccacgtttgacaaaattactcgcgacaca 435  Q
    ||||||||| |||||| ||||||||  ||||| ||||||| |||||| |||||| ||| |||  |||| |||||||||||||||| ||||| || |||||    
T  22705932 tattgttctagaccggtcaaaaggacatttgacccatttacttaggcccaatacaatccaaagtccaa-caccacgtttgacaaagttacttgcaacaca 22705834  T
Q  436 cccctcccatgcgagg-gggtgcacggaacgaaagagaccggttcaaacgaaacccaacgtctctttccacattcctgcaataaactcacaggcggttac 534  Q
    ||||| |||||| ||| ||||||||||| ||||||||||  ||||||||||| | |||||| ||| | ||| ||||||||||||| || |   |||||||    
T  22705833 ccccttccatgcaaggcgggtgcacggagcgaaagagactagttcaaacgaaccacaacgtttctctgcacgttcctgcaataaattctctaccggttac 22705734  T
Q  535 acttcccacaatttcgtaaccgtcagagtaaggtgtgccattacaacggctctgtagccctccacctctataaataggggactca 619  Q
    ||||||||  |||||||||||| |||||  |||||||||||||||| ||||||| || |||||||||||||||||| ||||||||    
T  22705733 acttcccatgatttcgtaaccgccagagccaggtgtgccattacaatggctctgcagtcctccacctctataaatacgggactca 22705649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 171 - 331
Target Start/End: Complemental strand, 42858241 - 42858080
Alignment:
Q  171 acactccaagtggatgatatattagt-gacactcaacatagaatactttgcctgaaattaatgactatttgttagagacaattttgacattatccgatag 269  Q
    ||||| |||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||| |    
T  42858241 acacttcaagtggatgatatattagcagacactcaacatagaatactttgcctgaaattaatgactatttgttagagacaattttgacattatgtgatgg 42858142  T
Q  270 aatgaattctatcatgctcgagtcagcaatgtttcaaactttcaatcagattaacagtttga 331  Q
    ||||||||||||||||||  || ||| ||||| ||||||| |||||||||||||||||||||    
T  42858141 aatgaattctatcatgctacagccagtaatgtctcaaactctcaatcagattaacagtttga 42858080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 370 - 642
Target Start/End: Complemental strand, 21802750 - 21802477
Alignment:
Q  370 catttatttaggctcaataccatctaaaacccaaacaccacgtttgacaaaattactcgcgacacacccctcccatgcgaggggg-tgcacggaacgaaa 468  Q
    |||||| ||||||  ||||| ||||||| | ||||||||||||||| |||| |||||  | |||||| ||| ||| || |||||| |||||||| ||||     
T  21802750 catttacttaggccgaatacaatctaaagctcaaacaccacgtttgtcaaagttactttcaacacacgccttccacgcaaggggggtgcacggagcgaag 21802651  T
Q  469 gagaccggttcaaacgaaacccaacgtctctttccacattcctgcaataaactcacaggcggttacacttcccacaatttcgtaaccgtcagagtaaggt 568  Q
    ||||| |||||| ||||| | |||||||||| | ||  |||  ||||||||||| |  || ||||||||||| || |||||||||||  |||||  ||||    
T  21802650 gagactggttcagacgaaccacaacgtctctctgcaggttctcgcaataaactctctcgctgttacacttcctacgatttcgtaaccaccagagccaggt 21802551  T
Q  569 gtgccattacaacggctctgtagccctccacctctataaataggggactcaatgtagtccccaaggtataatct 642  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||  | ||||||||||||| |||||    
T  21802550 gtgccattacaacggctctgtagccctcaacctctataaataggggactcacagcagtccccaaggtagaatct 21802477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 469 - 642
Target Start/End: Original strand, 9548968 - 9549141
Alignment:
Q  469 gagaccggttcaaacgaaacccaacgtctctttccacattcctgcaataaactcacaggcggttacacttcccacaatttcgtaaccgtcagagtaaggt 568  Q
    ||||| |||||||||||||| |||||||||| | ||| |||| ||||||||||| | |||||||||||||||||| ||||||||||||  ||||  ||||    
T  9548968 gagactggttcaaacgaaacacaacgtctctctgcacgttcccgcaataaactctctggcggttacacttcccacgatttcgtaaccgctagagccaggt 9549067  T
Q  569 gtgccattacaacggctctgtagccctccacctctataaataggggactcaatgtagtccccaaggtataatct 642  Q
    |||||  ||||||||||||| |||||||||||| |||||| ||||||||||| ||||||||||||||| |||||    
T  9549068 gtgcctctacaacggctctgcagccctccacctttataaaaaggggactcaaagtagtccccaaggtaaaatct 9549141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 337 - 615
Target Start/End: Complemental strand, 7595686 - 7595403
Alignment:
Q  337 attgttctggaccggccaaaaggatctttgatccatttatttaggctcaataccatctaaaacccaaacaccacgtttgacaaaattactcgcgacacac 436  Q
    |||||| |||||||| ||||||||||||||  ||||||| | |||| |||||| ||  ||| |  |||||||||| ||| |||| ||||| || ||||||    
T  7595686 attgttttggaccggtcaaaaggatctttggcccatttactcaggcccaatacaattcaaagcttaaacaccacgcttggcaaacttacttgcaacacac 7595587  T
Q  437 ccct--cccatgcgaggggg---tgcacggaacgaaagagaccggttcaaacgaaacccaacgtctctttccacattcctgcaataaactcacaggcggt 531  Q
    ||||  ||||   |||||||   |||||||| |||  |||||||||||||||||| | ||| |||||| | ||| |||| ||||||||||| | ||||||    
T  7595586 cccttccccacaggaggggggggtgcacggagcgagcgagaccggttcaaacgaaccacaatgtctctctgcacgttcccgcaataaactctctggcggt 7595487  T
Q  532 tacacttcccacaatttcgtaaccgtcagagtaaggtgtgccattacaacggctctgtagccctccacctctataaatagggga 615  Q
    |||||||||||| ||||||||||   ||| |  |||||||| |||||||||||| || ||||||||||||||||||||||||||    
T  7595486 tacacttcccacgatttcgtaacatccagcgccaggtgtgctattacaacggctttgcagccctccacctctataaatagggga 7595403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 339 - 606
Target Start/End: Complemental strand, 38612888 - 38612620
Alignment:
Q  339 tgttctggaccggccaaaaggatctttgatccatttatttaggctcaataccatctaaaacccaaacaccacgtttgacaaaattactcgcgacacaccc 438  Q
    |||||||||| || |||||||| |||||| ||||||| ||||||||||||| ||  ||| ||||||||||||||||| ||| |||||| || | ||||||    
T  38612888 tgttctggactggtcaaaaggagctttgacccatttacttaggctcaatactattcaaagcccaaacaccacgtttggcaacattacttgcaaaacaccc 38612789  T
Q  439 ctcccatgcgaggggg-tgcacggaacgaaagagaccggttcaaacgaaacccaacgtctctttccacattcctgcaataaactcacaggcggttacact 537  Q
    || ||  ||||||||| |||||||| | |    | |||||||||||||| | ||||||| || | ||| ||||  |||||| ||| | ||| ||||||||    
T  38612788 cttcctcgcgagggggttgcacggagcaagcagggccggttcaaacgaaccacaacgtccctctgcacgttcccacaataatctctctggcagttacact 38612689  T
Q  538 tcccacaatttcgtaaccgtcagagtaaggtgtgccattacaacggctctgtagccctccacctctata 606  Q
    |||||| |||| ||||||| |||||   ||||| ||||||||||||||||| ||  |||||||||||||    
T  38612688 tcccacgattttgtaaccgccagagcctggtgtaccattacaacggctctgcagatctccacctctata 38612620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 339 - 619
Target Start/End: Original strand, 2249860 - 2250141
Alignment:
Q  339 tgttctggaccggccaaaaggatctttgatccatttatttaggctcaataccatctaaaacccaaacaccacgtttgacaaaattactcgcgacacaccc 438  Q
    |||||||||||  ||||||||| |||||| | ||||| |||  | |||||| ||  ||| | |||| |||||||||| ||| |||||| |||||||||||    
T  2249860 tgttctggaccaaccaaaaggagctttgacctatttacttattcccaatacaattcaaagctcaaataccacgtttggcaacattacttgcgacacaccc 2249959  T
Q  439 ctcccatgcgaggggg-tgcacggaacgaaagagaccggttcaaacgaaacccaacgtctctttccacattcctgcaataaactcacaggcggttacact 537  Q
    || ||  || |||||| |||||||| | |   |||| |||||||||||| | |||||||||| | ||| |||| |||||||  || |  ||||||||| |    
T  2249960 cttccccgcaaggggggtgcacggagcaagcaagactggttcaaacgaaccacaacgtctctctgcacgttcccgcaataatatctctagcggttacaat 2250059  T
Q  538 tcccacaatttcgtaaccgtcagagtaaggtgtgccattacaacggctctgtagccctccacctctataaataggggactca 619  Q
    |||||| |||| ||||||| || ||   ||||||||||||||||||||||| | ||||||||||||||| ||||||||||||    
T  2250060 tcccacgattttgtaaccgccaaagcctggtgtgccattacaacggctctgcaaccctccacctctatatataggggactca 2250141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 341 - 535
Target Start/End: Original strand, 21801716 - 21801911
Alignment:
Q  341 ttctggaccggccaaaaggatctttgatccatttatttaggctcaataccatctaaaacccaaacaccacgtttgacaaaattactcgcgacacacccct 440  Q
    ||||||||||||||||||||||||||  ||||||| |||||| |||||| |||||||||||||||||||||||||  ||| ||||| || |||||| |||    
T  21801716 ttctggaccggccaaaaggatctttggcccatttacttaggcccaatactatctaaaacccaaacaccacgtttggaaaacttacttgcaacacactcct 21801815  T
Q  441 cccatgcga-gggggtgcacggaacgaaagagaccggttcaaacgaaacccaacgtctctttccacattcctgcaataaactcacaggcggttaca 535  Q
    | | ||| | ||||||| | ||| |||   |||||| |||||||||| | |||||||||| | ||| |||| |||||||  || | ||||||||||    
T  21801816 ctcctgcaaggggggtgtaaggagcgagcaagaccgattcaaacgaaccacaacgtctctctgcacgttcccgcaataagttctctggcggttaca 21801911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 339 - 482
Target Start/End: Original strand, 40635506 - 40635648
Alignment:
Q  339 tgttctggaccggccaaaaggatctttgatccatttatttaggctcaataccatctaaaacccaaacaccacgtttgacaaaattactcgcgacacaccc 438  Q
    |||||||||| || ||||||||||||||  ||||| | |||| | ||||| |||| |||  | |||||||||||||| ||||||||||||||||| |||     
T  40635506 tgttctggactggtcaaaaggatctttgc-ccattcacttagacccaatatcatccaaagtc-aaacaccacgtttggcaaaattactcgcgacaaacct 40635603  T
Q  439 ctcccatgcgag-ggggtgcacggaacgaaagagaccggttcaaa 482  Q
    || ||||||||| ||||||||||||||||||||||||||||||||    
T  40635604 cttccatgcgagaggggtgcacggaacgaaagagaccggttcaaa 40635648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 565 - 642
Target Start/End: Complemental strand, 22704000 - 22703923
Alignment:
Q  565 aggtgtgccattacaacggctctgtagccctccacctctataaataggggactcaatgtagtccccaaggtataatct 642  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| ||||||||  | ||||||||||||| |||||    
T  22704000 aggtgtgccattacaacggctctgcagccctccacctctataaatatgggactcacagcagtccccaaggtagaatct 22703923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 335 - 603
Target Start/End: Original strand, 30764845 - 30765114
Alignment:
Q  335 atattgttctggaccggccaaaaggatctttgatccatttatttaggctcaataccatctaaaacccaaacaccacgtttgacaaaattactcgcgacac 434  Q
    ||||||||||||| |||||||||||   || | |||||||| |||||  |||||| |||  || |  |||| ||||||||| |||| ||||| ||||||     
T  30764845 atattgttctggatcggccaaaagggctttaggtccatttacttaggtccaatacaatcccaagcttaaactccacgtttggcaaatttacttgcgacat 30764944  T
Q  435 acccctcccatgcgagggg-gtgcacggaacgaaagagaccggttcaaacgaaacccaacgtctctttccacattcctgcaataaactcacaggcggtta 533  Q
    |||||| |   |||||||| |||||| || | |    ||| ||||||| |||| | ||| |||||||| |||||||| ||||| |  || | ||||||||    
T  30764945 accccttcaccgcgaggggagtgcacagagcaagcaggactggttcaagcgaaccacaatgtctctttgcacattcccgcaattatttctctggcggtta 30765044  T
Q  534 cacttcccacaatttcgtaaccgtcagagtaaggtgtgccattacaacggctctgtagccctccacctct 603  Q
    |||||||||| |||||||| ||||| ||   |||||||||| |||||| |||||| ||||||||||||||    
T  30765045 cacttcccacgatttcgtacccgtcggacctaggtgtgccactacaacagctctgcagccctccacctct 30765114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 526 - 618
Target Start/End: Original strand, 28794084 - 28794176
Alignment:
Q  526 ggcggttacacttcccacaatttcgtaaccgtcagagtaaggtgtgccattacaacggctctgtagccctccacctctataaataggggactc 618  Q
    |||||||||||||||||| |||||||||||||||||   | ||||||||||||||||||| || ||||   ||||| |||| |||||||||||    
T  28794084 ggcggttacacttcccacgatttcgtaaccgtcagacacacgtgtgccattacaacggctatgcagccactcacctttatatataggggactc 28794176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 339 - 440
Target Start/End: Original strand, 9548828 - 9548929
Alignment:
Q  339 tgttctggaccggccaaaaggatctttgatccatttatttaggctcaataccatctaaaacccaaacaccacgtttgacaaaattactcgcgacacaccc 438  Q
    ||||||||||||||||||||||| ||||  |||||||  ||| | |||||| ||| ||| ||||||| |||||||||  | | ||||| |||||||||||    
T  9548828 tgttctggaccggccaaaaggatgtttggcccatttacgtagtcccaatacaatccaaagcccaaacgccacgtttggtatagttacttgcgacacaccc 9548927  T
Q  439 ct 440  Q
    ||    
T  9548928 ct 9548929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 201; Significance: 1e-109; HSPs: 14)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 339 - 663
Target Start/End: Original strand, 24973756 - 24974080
Alignment:
Q  339 tgttctggaccggccaaaaggatctttgatccatttatttaggctcaataccatctaaaacccaaacaccacgtttgacaaaattactcgcgacacaccc 438  Q
    |||| |||||||||||||||| |||||| |||||||| |||||| ||||| |||| ||| ||||||||||||||||  |||||||||| |||||||| ||    
T  24973756 tgttatggaccggccaaaaggttctttggtccatttacttaggcccaatatcatccaaagcccaaacaccacgttttgcaaaattacttgcgacacatcc 24973855  T
Q  439 ctcccatgcgagggggtgcacggaacgaaagagaccggttcaaacgaaacccaacgtctctttccacattcctgcaataaactcacaggcggttacactt 538  Q
    || ||| || ||||||||||| |||||||||||||||||||||||||| | ||||||||||||| |||||||  ||||||||||||||||||||||||||    
T  24973856 cttccaagcaagggggtgcacagaacgaaagagaccggttcaaacgaacctcaacgtctctttcaacattcccacaataaactcacaggcggttacactt 24973955  T
Q  539 cccacaatttcgtaaccgtcagagtaaggtgtgccattacaacggctctgtagccctccacctctataaataggggactcaatgtagtccccaaggtata 638  Q
    ||||| ||||||||||||||||||| |||||||||||||||||||||||| ||||||| | ||||||||||||||||||||||| |||| |||||||| |    
T  24973956 cccacgatttcgtaaccgtcagagttaggtgtgccattacaacggctctgcagccctctaactctataaataggggactcaatgcagtcaccaaggtaga 24974055  T
Q  639 atctttctttctctaaaaccctcac 663  Q
    |||| |||| |||||||||||||||    
T  24974056 atctctcttcctctaaaaccctcac 24974080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 343 - 663
Target Start/End: Original strand, 21817605 - 21817932
Alignment:
Q  343 ctggaccggccaaaaggatctttgatccatttatttaggctcaataccatctaaaacccaaacaccacgtttgacaaaattactcgcgacacacccctcc 442  Q
    ||||||||||||||||||||||||  ||||| | |||||| || ||| ||| ||| ||||||||||||||||| |||||||||||||||||||||||| |    
T  21817605 ctggaccggccaaaaggatctttggcccattcacttaggcccagtactatccaaagcccaaacaccacgtttggcaaaattactcgcgacacaccccttc 21817704  T
Q  443 catgcgagggg-------gtgcacggaacgaaagagaccggttcaaacgaaacccaacgtctctttccacattcctgcaataaactcacaggcggttaca 535  Q
    || | ||||||       ||||||||||||||||||| ||||||||||||| |||| ||||||||||||| |||| ||||||||||||||||| ||||||    
T  21817705 cacgtgaggggggggggggtgcacggaacgaaagagatcggttcaaacgaaccccagcgtctctttccacgttcccgcaataaactcacaggctgttaca 21817804  T
Q  536 cttcccacaatttcgtaaccgtcagagtaaggtgtgccattacaacggctctgtagccctccacctctataaataggggactcaatgtagtccccaaggt 635  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||||||||||  ||| ||||||| |||||||||||||||||||| ||||||||||||    
T  21817805 cttcccacgatttcgtaaccgtcagagttaggtgtgccattacaacggctctgcggccatccacctttataaataggggactcaatgcagtccccaaggt 21817904  T
Q  636 ataatctttctttctctaaaaccctcac 663  Q
    | |||||||||| |||||||||||||||    
T  21817905 agaatctttcttcctctaaaaccctcac 21817932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 335 - 565
Target Start/End: Complemental strand, 49472537 - 49472309
Alignment:
Q  335 atattgttctggaccggccaaaaggatctttgatccatttatttaggctcaataccatctaaaacccaaacaccacgtttgacaaaattactcgcgacac 434  Q
    ||||| ||||||||||| ||||||||||||||| ||||||| |||||| |||||||||| |||  ||||||||| |||||||||||||||||||||| ||    
T  49472537 atattattctggaccgggcaaaaggatctttgacccatttacttaggcccaataccatccaaagtccaaacaccgcgtttgacaaaattactcgcgaaac 49472438  T
Q  435 acccctcccatgcgagggggtgcacggaacgaaagagaccggttcaaacgaaacccaacgtctctttccacattcctgcaataaactcacaggcggttac 534  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| |||| |||||||||||||| |||||||     
T  49472437 acccctcccacgcgagggggtgcacggaacgaaagagaccggttcaaatgaaccccaacgtctctttccacgttcccgcaataaactcacatgcggttat 49472338  T
Q  535 acttcccacaatttcgtaaccgtcagagtaa 565  Q
    |||  | || |||||||||||||||||||||    
T  49472337 act--ctacgatttcgtaaccgtcagagtaa 49472309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 336 - 641
Target Start/End: Original strand, 19967285 - 19967590
Alignment:
Q  336 tattgttctggaccggccaaaaggatctttgatccatttatttaggctcaataccatctaaaacccaaacaccacgtttgacaaaattactcgcgacaca 435  Q
    |||||||||||||||| |||||||| |||||||||||||| |||||| |||||| ||| |||  ||||||||||||||||||||| ||||  ||||||||    
T  19967285 tattgttctggaccggtcaaaaggacctttgatccatttacttaggcccaatacgatccaaagtccaaacaccacgtttgacaaagttacctgcgacaca 19967384  T
Q  436 cccctcccatgcgagggggtgcacggaacgaaagagaccggttcaaacgaaacccaacgtctctttccacattcctgcaataaactcacaggcggttaca 535  Q
    ||||| |||    |||||||||||||| |||||||||| |||||||||||| | |||||||||| | ||| |||| ||||||||||| | ||||||||||    
T  19967385 ccccttccacataagggggtgcacggagcgaaagagactggttcaaacgaaccacaacgtctctctgcacgttcccgcaataaactctctggcggttaca 19967484  T
Q  536 cttcccacaatttcgtaaccgtcagagtaaggtgtgccattacaacggctctgtagccctccacctctataaataggggactcaatgtagtccccaaggt 635  Q
    |  ||||| |||||||||||| |||||  ||||||| ||||||||||| | || | ||||||||||||||||||||||||||||| | |||||| |||||    
T  19967485 ccacccacgatttcgtaaccgccagagccaggtgtgtcattacaacggttatgcaaccctccacctctataaataggggactcaaagcagtccctaaggt 19967584  T
Q  636 ataatc 641  Q
    | ||||    
T  19967585 agaatc 19967590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 341 - 642
Target Start/End: Original strand, 19441982 - 19442283
Alignment:
Q  341 ttctggaccggccaaaaggatctttgatccatttatttaggctcaataccatctaaaacccaaacaccacgtttgacaaaattactcgcgacacacccct 440  Q
    |||||||||||||||||||| |||||  ||||||| |||||| |||||| ||| ||||| ||||||||||||||| |||| ||||| |||||||||||||    
T  19441982 ttctggaccggccaaaaggacctttggcccatttacttaggcccaatacaatccaaaactcaaacaccacgtttggcaaagttacttgcgacacacccct 19442081  T
Q  441 cccatgcgagggggtgcacggaacgaaagagaccggttcaaacgaaacccaacgtctctttccacattcctgcaataaactcacaggcggttacacttcc 540  Q
     |||  | ||||||||  |||| |||||||||| ||||||| |||| | |||||||||| | ||| ||||  |||||||||| | |||||||| ||||||    
T  19442082 tccacacaagggggtgtgcggagcgaaagagactggttcaatcgaaccacaacgtctctctacacgttcccacaataaactctctggcggttatacttcc 19442181  T
Q  541 cacaatttcgtaaccgtcagagtaaggtgtgccattacaacggctctgtagccctccacctctataaataggggactcaatgtagtccccaaggtataat 640  Q
    | | |||||||||||| |||||| || |||| ||||||||||||| || ||| ||||||||||||||||||||||||||  | ||||||||||||| |||    
T  19442182 cccgatttcgtaaccgccagagtcagatgtgtcattacaacggctttgcagcactccacctctataaataggggactcacagcagtccccaaggtagaat 19442281  T
Q  641 ct 642  Q
    ||    
T  19442282 ct 19442283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 339 - 528
Target Start/End: Original strand, 21815425 - 21815615
Alignment:
Q  339 tgttctggaccggccaaaaggatctttgatccatttatttaggctcaataccatctaaaacccaaacaccacgtttgacaaaattactcgcgacacaccc 438  Q
    |||||||||||||||||||| |||||||  ||||| | |||||| || ||||||| ||| ||||||||||||||||| |||||||||||| |||||||||    
T  21815425 tgttctggaccggccaaaagaatctttggcccattcacttaggcccagtaccatccaaatcccaaacaccacgtttggcaaaattactcgtgacacaccc 21815524  T
Q  439 ctcccatgcga-gggggtgcacggaacgaaagagaccggttcaaacgaaacccaacgtctctttccacattcctgcaataaactcacaggc 528  Q
    || ||| |||| |||||||||||||||||||||||| |||||||||||| |||||||||||||||||| |||| |||||||||||||||||    
T  21815525 cttccacgcgaggggggtgcacggaacgaaagagactggttcaaacgaaccccaacgtctctttccacgttcccgcaataaactcacaggc 21815615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 339 - 642
Target Start/End: Original strand, 8995308 - 8995610
Alignment:
Q  339 tgttctggaccggccaaaaggatctttgatccatttatttaggctcaataccatctaaaacccaaacaccacgtttgacaaaattactcgcgacacaccc 438  Q
    |||| ||||||| ||||||||| |||||  ||||||| |||| | |||||| ||||||| || |||||||||||||||||| |||||| |||||| ||||    
T  8995308 tgttttggaccgaccaaaaggacctttggcccatttacttagacccaatactatctaaagcctaaacaccacgtttgacaacattacttgcgacataccc 8995407  T
Q  439 ctcccatgcgagggggtgcacggaacgaaagagaccggttcaaacgaaacccaacgtctctttccacattcctgcaataaactcacaggcggttacactt 538  Q
    ||  |   |||||||||||||||| |||  ||||||||||||| | |  | ||||||||||   ||| |||| |||||||||||   |||||||||||||    
T  8995408 ctttcccacgagggggtgcacggagcgagcgagaccggttcaagcaagccacaacgtctctcagcacgttcccgcaataaactctatggcggttacactt 8995507  T
Q  539 cccacaatttcgtaaccgtcagagtaaggtgtgccattacaacggctctgtagccctccacctctataaataggggactcaatgtagtccccaaggtata 638  Q
    ||||| ||||||||||||  ||||  ||||||| || | ||||||||||| |||||||||||||||||||||||||||||| || | ||||||||||| |    
T  8995508 cccacgatttcgtaaccgctagagctaggtgtgtcaat-caacggctctgcagccctccacctctataaataggggactcactgcattccccaaggtaga 8995606  T
Q  639 atct 642  Q
    ||||    
T  8995607 atct 8995610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 338 - 636
Target Start/End: Complemental strand, 9859303 - 9859000
Alignment:
Q  338 ttgttctggaccggccaaaaggatctttgatccatttatttaggctcaataccatctaaaacccaaacaccacgtttgacaaaattactcgcgacacacc 437  Q
    ||||||||||||||||||||||||||||||   ||| | |||| |  ||||| ||| |||| |||||||||||||||| |||| ||||| || |||||||    
T  9859303 ttgttctggaccggccaaaaggatctttgacttattgacttagacctaatacaatccaaaatccaaacaccacgtttggcaaacttacttgcaacacacc 9859204  T
Q  438 cctcccatgcgaggggg-tgcacggaacgaaagagaccggttcaaacgaaacccaacgtctctttccacattcctgcaataaactcacaggcggttacac 536  Q
    |||  | ||| |||||| ||||| || |||  |||||  ||||||||||| | |||||||||| | ||| |||| |||||||||||   |||||||||||    
T  9859203 cctttcctgcaaggggggtgcacagagcgagtgagactcgttcaaacgaaccacaacgtctctctgcacgttcccgcaataaactctttggcggttacac 9859104  T
Q  537 ttcccacaatttcgtaaccgtcagag-taag---gtgtgccattacaacggctctgtagccctccacctctataaataggggactcaatgtagtccccaa 632  Q
    ||||||| ||||||||||||||||||  |||   |||||| |  |||||||||||| ||||||||||||||||||||||||||||||  | |||||||||    
T  9859103 ttcccacgatttcgtaaccgtcagagccaagtgtgtgtgcaaccacaacggctctgcagccctccacctctataaataggggactcatagcagtccccaa 9859004  T
Q  633 ggta 636  Q
    ||||    
T  9859003 ggta 9859000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 528 - 663
Target Start/End: Original strand, 22186045 - 22186180
Alignment:
Q  528 cggttacacttcccacaatttcgtaaccgtcagagtaaggtgtgccattacaacggctctgtagccctccacctctataaataggggactcaatgtagtc 627  Q
    |||||||||||||||| |||| ||||||||| ||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||| || | ||||    
T  22186045 cggttacacttcccacgattttgtaaccgtccgagtaaggtgtgccattacaacggctctgcagccatccacctctataaataggggacttaaagcagtc 22186144  T
Q  628 cccaaggtataatctttctttctctaaaaccctcac 663  Q
    ||||||||| |||||||||| |||| ||||||||||    
T  22186145 cccaaggtagaatctttcttcctctcaaaccctcac 22186180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 341 - 642
Target Start/End: Complemental strand, 38622132 - 38621830
Alignment:
Q  341 ttctggaccggccaaaaggatctttgatccatttatttaggctcaataccatctaaaacccaaacaccacgtttgacaaaattactcgcgacacacccct 440  Q
    ||||||||||| ||||||||  ||||| | ||||| |||||| |||||| ||| ||| | |||||| |||||||  | | |||||| |||||| ||||||    
T  38622132 ttctggaccggacaaaaggacttttgacctatttacttaggcccaatacaatccaaagctcaaacatcacgtttagcgacattacttgcgacatacccct 38622033  T
Q  441 cccatgcgaggggg-tgcacggaacgaaagagaccggttcaaacgaaacccaacgtctctttccacattcctgcaataaactcacaggcggttacacttc 539  Q
     ||  ||||||||| | |||||| |||  |||| ||||| ||||||| | |||||||||| | ||| |||| |||||||| |    ||| |||||||||     
T  38622032 tccccgcgaggggggtccacggagcgagcgagatcggttaaaacgaaccacaacgtctctctgcacgttcccgcaataaattgtttggcagttacacttt 38621933  T
Q  540 ccacaatttcgtaaccgtcagagtaaggtgtgccattacaacggctctgtagccctccacctctataaataggggactcaatgtagtccccaaggtataa 639  Q
    |||| |||||||||||  |||||  |  ||||||||||||||||||||| ||||||||||||||||| ||| |||||||| || ||||||||||||| ||    
T  38621932 ccacgatttcgtaaccaccagagccaaatgtgccattacaacggctctgcagccctccacctctatatataagggactcactgcagtccccaaggtagaa 38621833  T
Q  640 tct 642  Q
    |||    
T  38621832 tct 38621830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 377 - 642
Target Start/End: Original strand, 8990668 - 8990934
Alignment:
Q  377 ttaggctcaataccatctaaaacccaaacaccacgtttgacaaaattactcgcgacacacccctcccatgcgagg-gggtgcacggaacgaaagagaccg 475  Q
    ||||| ||| ||| |||||||  ||||||||| |||||||||| |||||  ||||||| ||||| ||   ||| | |||||||||||  ||  |||||||    
T  8990668 ttaggttcagtactatctaaagtccaaacacctcgtttgacaacattacctgcgacacgccccttccccacgaagagggtgcacggagtgagcgagaccg 8990767  T
Q  476 gttcaaacgaaacccaacgtctctttccacattcctgcaataaactcacaggcggttacacttcccacaatttcgtaaccgtcagagtaaggtgtgccat 575  Q
    |||||| | |  | |||||||||| | ||| |||   |||||||||| | | | |||||||||||||| ||||||||||||  ||||  |||||||||||    
T  8990768 gttcaagcaagccacaacgtctctctgcacgttctcacaataaactctctgacagttacacttcccacgatttcgtaaccgctagagccaggtgtgccat 8990867  T
Q  576 tacaacggctctgtagccctccacctctataaataggggactcaatgtagtccccaaggtataatct 642  Q
    ||||||||||||  |||||||||||||| ||||||||||||||| || |||||||| |||| |||||    
T  8990868 tacaacggctctacagccctccacctctgtaaataggggactcactgcagtccccacggtagaatct 8990934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 565 - 660
Target Start/End: Original strand, 21815619 - 21815714
Alignment:
Q  565 aggtgtgccattacaacggctctgtagccctccacctctataaataggggactcaatgtagtccccaaggtataatctttctttctctaaaaccct 660  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||| ||||||||||| |||| |||||||| |||||||||| ||||||||||||    
T  21815619 aggtgtgccattacaacagctctgcagccctccacctctataaatatgggactcaatgcagtctccaaggtagaatctttcttcctctaaaaccct 21815714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 337 - 499
Target Start/End: Complemental strand, 33029126 - 33028963
Alignment:
Q  337 attgttctggaccggccaaaaggatctttgatccatttatttaggctcaataccatctaaaacccaaacaccacgtttgacaaaattactcgcgacacac 436  Q
    ||||||||||||||||||||| ||  ||||   || ||| |||||| |||||  ||| ||| ||||||||||||||||||| | |||||| |||||||||    
T  33029126 attgttctggaccggccaaaatgagttttggctcaattacttaggcacaatataatccaaagcccaaacaccacgtttgactatattacttgcgacacac 33029027  T
Q  437 ccctcccatgcgagggggtgcacggaacgaaagagaccggttcaaacgaaacc-caacgtctct 499  Q
    |||| ||  | ||||||||| ||||| | |  | ||||||||||||  ||||| ||||||||||    
T  33029026 cccttccccgtgagggggtgaacggagcaagcgggaccggttcaaaacaaaccacaacgtctct 33028963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 339 - 500
Target Start/End: Complemental strand, 30894243 - 30894082
Alignment:
Q  339 tgttctggaccggccaaaaggatctttgatccatttatttaggctcaataccatctaaaacccaaacaccacgtttgacaa-aattactcgcgacacacc 437  Q
    ||||||||||||| |||||| ||||| | |||||||| ||| || | |||| || |||  | |||| ||| | ||||| || |||||||||| |||||||    
T  30894243 tgttctggaccggtcaaaagaatcttaggtccatttacttaagcccgatacaatttaag-ctcaaataccgcatttgataacaattactcgcaacacacc 30894145  T
Q  438 cctcccatgcgagggggtgcacggaacgaaagagaccggttcaaacgaaacccaacgtctctt 500  Q
    ||| ||  ||||||||||||||||| | || |||||  |||||||| ||   |||||||||||    
T  30894144 ccttcctcgcgagggggtgcacggagcaaatgagacatgttcaaacaaactgcaacgtctctt 30894082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 195; Significance: 1e-106; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 339 - 660
Target Start/End: Complemental strand, 25821047 - 25820725
Alignment:
Q  339 tgttctggaccggccaaaaggatctttgatccatttatttaggctcaataccatctaaaacccaaacaccacgtttgacaaaattactcgcgacacaccc 438  Q
    ||||||||||||||||||||||||||||  | |||||||| |||  ||||||||| ||| ||||||||||||||||| ||||||||||||||||| || |    
T  25821047 tgttctggaccggccaaaaggatctttggccaatttatttgggccgaataccatccaaagcccaaacaccacgtttggcaaaattactcgcgacaaacac 25820948  T
Q  439 ctcccatgcgaggggg-tgcacggaacgaaagagaccggttcaaacgaaacccaacgtctctttccacattcctgcaataaactcacaggcggttacact 537  Q
    || || || ||||||| |||||| ||||||||  |||| |||||||||| |||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  25820947 cttccgtgtgaggggggtgcacgaaacgaaaggaaccgattcaaacgaaccccaacgtctctttccacgttccagcaataaactcacaggcggttacact 25820848  T
Q  538 tcccacaatttcgtaaccgtcagagtaaggtgtgccattacaacggctctgtagccctccacctctataaataggggactcaatgtagtccccaaggtat 637  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||| ||||||||||||||||| |||||||| ||||     
T  25820847 tcccacgatttcgtaaccgtcagagtaaggtgtgccattacaacggctttgcagccctccacctctaaaaataggggactcaatgcagtccccatggtag 25820748  T
Q  638 aatctttctttctctaaaaccct 660  Q
    |||||||||| |||| |||||||    
T  25820747 aatctttcttcctctcaaaccct 25820725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 340 - 642
Target Start/End: Original strand, 32008884 - 32009186
Alignment:
Q  340 gttctggaccggccaaaaggatctttgatccatttatttaggctcaataccatctaaaacccaaacaccacgtttgacaaaattactcgcgacacacccc 439  Q
    ||||||||||||||||||||| |||||| |||| || |||||| |||||| ||| ||| |||||||||||||||||||||| ||||| | ||||||||||    
T  32008884 gttctggaccggccaaaaggacctttgacccatatacttaggcccaatacaatcgaaagcccaaacaccacgtttgacaaagttacttgtgacacacccc 32008983  T
Q  440 tcccatgcgagggggtgcacggaacgaaagagaccggttcaaacgaaacccaacgtctctttccacattcctgcaataaactcacaggcggttacacttc 539  Q
    | ||   | |||||||||||||| |||||||||| |||||||||||| | || ||||||| | ||| |||| ||||||| ||| |  ||| |||||||||    
T  32008984 ttcctcacaagggggtgcacggagcgaaagagactggttcaaacgaaccacagcgtctctctgcacgttcccgcaataatctctctagcgattacacttc 32009083  T
Q  540 ccacaatttcgtaaccgtcagagtaaggtgtgccattacaacggctctgtagccctccacctctataaataggggactcaatgtagtccccaaggtataa 639  Q
    |||| |||||||||||| |||||| |||||||||||||||||||||||  ||||||||||||||||||||||||||||||| ||| ||||||||||| ||    
T  32009084 ccacgatttcgtaaccgccagagtcaggtgtgccattacaacggctctacagccctccacctctataaataggggactcaaagtactccccaaggtaaaa 32009183  T
Q  640 tct 642  Q
    |||    
T  32009184 tct 32009186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 342 - 633
Target Start/End: Original strand, 18573889 - 18574181
Alignment:
Q  342 tctggaccggccaaaaggatctttgatccatttatttaggctcaataccatctaaaacccaaacaccacgtttgacaaaattactcgcgacacacccctc 441  Q
    |||||||||||||||||||| |||| |||||||| ||||||  ||||| ||  ||| ||||||||||||||||| |||| ||||| |||||||| ||||     
T  18573889 tctggaccggccaaaaggatttttggtccatttacttaggcctaatacaatgcaaagcccaaacaccacgtttggcaaagttacttgcgacacatccctt 18573988  T
Q  442 ccatgcgaggggg-tgcacggaacgaaagagaccggttcaaacgaaacccaacgtctctttccacattcctgcaataaactcacaggcggttacacttcc 540  Q
    |||  | |||||| |||| ||| | |||||||  |||||||||||| | |||||||||| | ||| ||||  |||||||||| | |||||||||||||||    
T  18573989 ccacacaaggggggtgcatggagcaaaagagagtggttcaaacgaaccacaacgtctctctgcacgttcccacaataaactctctggcggttacacttcc 18574088  T
Q  541 cacaatttcgtaaccgtcagagtaaggtgtgccattacaacggctctgtagccctccacctctataaataggggactcaatgtagtccccaag 633  Q
    ||| |||||||||||| |||||  |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| | | ||||||||    
T  18574089 cacgatttcgtaaccgccagagccaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaaagcattccccaag 18574181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 338 - 641
Target Start/End: Original strand, 18040356 - 18040652
Alignment:
Q  338 ttgttctggaccggccaaaaggatctttgatccatttatttaggctcaataccatctaaaacccaaacaccacgtttgacaaaattactcgcgacacacc 437  Q
    ||||||||||||||||||||||| |||||  ||||||| |||||| |||||  ||| ||| |||||||||||       |||| ||||| | ||||||||    
T  18040356 ttgttctggaccggccaaaaggacctttggcccatttacttaggc-caatataatccaaagcccaaacaccag------caaagttacttgtgacacacc 18040448  T
Q  438 cctcccatgcgagg-gggtgcacggaacgaaagagaccggttcaaacgaaacccaacgtctctttccacattcctgcaataaactcacaggcggttacac 536  Q
    ||| |||  | ||| ||||||||||| |||||||||| |||||||||||| | |||||||||| | ||| |||| |||||||||||   |||||||||||    
T  18040449 ccttccacacaaggtgggtgcacggagcgaaagagactggttcaaacgaaccacaacgtctctctgcacgttcccgcaataaactctatggcggttacac 18040548  T
Q  537 ttcccacaatttcgtaaccgtcagagtaaggtgtgccattacaacggctctgtagccctccacctctataaataggggactcaatgtagtccccaaggta 636  Q
    ||||||| ||||||||||||||||||  |||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| | |||||||||||||    
T  18040549 ttcccacgatttcgtaaccgtcagagccaggtgtgccattacaacggctctgcagctctccacctctataaataggggactcaa-gcagtccccaaggta 18040647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 338 - 642
Target Start/End: Original strand, 41280676 - 41280982
Alignment:
Q  338 ttgttctggaccggccaaaaggatctttgatccatttatttaggctcaataccatctaaaacccaaacaccacgtttgacaaaattactcgcgacacacc 437  Q
    |||||||||||||| |||||||| |||||| ||||||| |||||| ||| || ||| ||| ||||||||||| ||||| ||| |||||| ||||||||||    
T  41280676 ttgttctggaccggacaaaaggacctttgacccatttacttaggcccaacacaatccaaagcccaaacaccatgtttggcaacattacttgcgacacacc 41280775  T
Q  438 cc---tcccatgcgagggggtgcacggaacgaaagagaccggttcaaacgaaacccaacgtctctttccacattcctgcaataaactcacaggcggttac 534  Q
    ||   || ||   | ||||||||||||| |||   ||||||||||||||||  | ||||| |||| | ||| |||| ||||||||||| | |||||||||    
T  41280776 ccctttcgcacaagggggggtgcacggagcgagcaagaccggttcaaacgagccacaacg-ctctctgcacgttcccgcaataaactctctggcggttac 41280874  T
Q  535 acttcccacaatttcgtaaccgtcagagtaaggtgtgccattacaacggctctgtagccctccacctctataaataggggactcaatgtagtccccaagg 634  Q
    ||||||||| |||| ||||||  |||||| |||||||||||||||||||||||| || |||||||||||||||||||||||||||    |||||||||||    
T  41280875 acttcccacgattttgtaacccccagagtcaggtgtgccattacaacggctctgcagtcctccacctctataaataggggactcataacagtccccaagg 41280974  T
Q  635 tataatct 642  Q
    || |||||    
T  41280975 tagaatct 41280982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 338 - 642
Target Start/End: Complemental strand, 7999980 - 7999677
Alignment:
Q  338 ttgttctggaccggccaaaaggatctttgatccatttatttaggctcaataccatctaaaacccaaacaccacgtttgacaaaattactcgcgacacacc 437  Q
    |||||||||||||||||||||||  ||||  ||||||| |||||| |||||| ||| | ||||| |||||| |||||| |||||||||| ||||||||||    
T  7999980 ttgttctggaccggccaaaaggacatttggcccatttacttaggcccaatacaatccacaacccgaacaccgcgtttggcaaaattacttgcgacacacc 7999881  T
Q  438 cctcccatgcgagggg-gtgcacggaacgaaagagaccggttcaaacgaaacccaacgtctctttccacattcctgcaataaactcacaggcggttacac 536  Q
    ||| |||  | ||| | ||||||||| ||| |||||| ||||| |||||| | |||||||||| | ||  |||| ||||||||||| | |||||||||||    
T  7999880 ccttccacacaaggcgagtgcacggagcgacagagactggttccaacgaaccacaacgtctctctgcatgttcccgcaataaactctctggcggttacac 7999781  T
Q  537 ttcccacaatttcgtaaccgtcagagtaaggtgtgccattacaacggctctgtagccctccacctctataaataggggactcaatgtagtccccaaggta 636  Q
    ||||||| |||||||||||| |||||  ||||||| |||||||||||  ||| || |||||||||||||||| ||| ||||||  | |||||||||||||    
T  7999780 ttcccacgatttcgtaaccgccagagccaggtgtgtcattacaacgg--ctgcagtcctccacctctataaacaggagactcacggcagtccccaaggta 7999683  T
Q  637 taatct 642  Q
     |||||    
T  7999682 gaatct 7999677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 481 - 636
Target Start/End: Original strand, 10532801 - 10532956
Alignment:
Q  481 aacgaaacccaacgtctctttccacattcctgcaataaactcacaggcggttacacttcccacaatttcgtaaccgtcagagtaaggtgtgccattacaa 580  Q
    |||||| | |||||||||| ||||| |||||||||||||| | | ||||||||||||| |||| |||||||||||| |||||| ||||||||||||||||    
T  10532801 aacgaaccacaacgtctctctccacgttcctgcaataaacaccctggcggttacactttccacgatttcgtaaccgccagagtcaggtgtgccattacaa 10532900  T
Q  581 cggctctgtagccctccacctctataaataggggactcaatgtagtccccaaggta 636  Q
    |||||||| |||||||||||||||||||||||||||| |||| |||||||||||||    
T  10532901 cggctctgcagccctccacctctataaataggggacttaatggagtccccaaggta 10532956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 402 - 642
Target Start/End: Original strand, 2085674 - 2085915
Alignment:
Q  402 aaacaccacgtttgacaaaattactcgcgacacacccctcccatgcgaggggg-tgcacggaacgaaagagaccggttcaaacgaaacccaacgtctctt 500  Q
    ||||||||||||||  ||| ||||| || |||||||||| ||| || |||||| | |||||| ||||||||||  ||||||||||| | ||| ||||||     
T  2085674 aaacaccacgtttggaaaagttacttgcaacacaccccttccaagcaaggggggtacacggagcgaaagagactagttcaaacgaaccacaatgtctctc 2085773  T
Q  501 tccacattcctgcaataaactcacaggcggttacacttcccacaatttcgtaaccgtcagagtaaggtgtgccattacaacggctctgtagccctccacc 600  Q
    | ||  |||| |||||||||   | |||  ||||||||||||| |||||||||||| |||||  ||||||||||||||||||| |||| |||||||||||    
T  2085774 tgcatgttcccgcaataaacgacctggcaattacacttcccacgatttcgtaaccgccagagccaggtgtgccattacaacggttctgcagccctccacc 2085873  T
Q  601 tctataaataggggactcaatgtagtccccaaggtataatct 642  Q
    |||||||||||||||||||||| ||||||||||||| |||||    
T  2085874 tctataaataggggactcaatgcagtccccaaggtagaatct 2085915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 341 - 618
Target Start/End: Complemental strand, 11709709 - 11709419
Alignment:
Q  341 ttctggaccggccaaaaggatctttgatccatttatttaggctcaataccatctaaaacccaaacaccacgtttgacaaaattactcgcgacacacccct 440  Q
    ||||||||||||||||||||||||||  ||||||| |||||| |||||| ||| ||| |||||| |||||||||||||| |||||| |||||||||||||    
T  11709709 ttctggaccggccaaaaggatctttggcccatttacttaggcccaatacaatccaaagcccaaataccacgtttgacaatattacttgcgacacacccct 11709610  T
Q  441 cccatgcgaggggg-------------tgcacggaacgaaagagaccggttcaaacgaaacccaacgtctctttccacattcctgcaataaactcacagg 527  Q
     |   |||||||||             |||||||||  |   ||| ||||||||||||| | |||||||||| | ||| ||||  |||||| ||| | ||    
T  11709609 tcaccgcgaggggggggggggggggggtgcacggaataagcaagatcggttcaaacgaaccacaacgtctctctgcacgttcccacaataatctctctgg 11709510  T
Q  528 cggttacacttcccacaatttcgtaaccgtcagagtaaggtgtgccattacaacggctctgtagccctccacctctataaataggggactc 618  Q
    |||||||||||||||| |||||||||  | |||||   ||||||||||||||||||||||| | ||||||||||||||| |||||||||||    
T  11709509 cggttacacttcccacgatttcgtaaatgccagagcctggtgtgccattacaacggctctgcaaccctccacctctatatataggggactc 11709419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 450 - 642
Target Start/End: Original strand, 7454647 - 7454839
Alignment:
Q  450 gggggtgcacggaacgaaagagaccggttcaaacgaaacccaacgtctctttccacattcctgcaataaactcacaggcggttacacttcccacaatttc 549  Q
    ||||||||||||| |||  |||||||||||| ||||  | |||||||||| | ||| ||||  ||||||||||   | |||||||||||||||| |||||    
T  7454647 gggggtgcacggagcgagcgagaccggttcatacgagccacaacgtctctatgcacgttcccacaataaactctatgacggttacacttcccacgatttc 7454746  T
Q  550 gtaaccgtcagagtaaggtgtgccattacaacggctctgtagccctccacctctataaataggggactcaatgtagtccccaaggtataatct 642  Q
    ||||||| |||||  |||||||||||||||||||||||| |||| |||||||||||||||||||||||||  | |||||||||| || |||||    
T  7454747 gtaaccgccagagccaggtgtgccattacaacggctctgcagccttccacctctataaataggggactcatagcagtccccaagttagaatct 7454839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 339 - 606
Target Start/End: Original strand, 22609363 - 22609631
Alignment:
Q  339 tgttctggaccggccaaaaggatctttgatccatttatttaggctcaataccatctaaaacccaaacaccacgtttgacaaaattactcgcgacacaccc 438  Q
    |||||||||||| |||||||||||||||||||||||| |||||| ||||| |||| ||| ||||||||||| ||||||||| |||| | || ||||| ||    
T  22609363 tgttctggaccgaccaaaaggatctttgatccatttacttaggcccaata-catccaaagcccaaacaccatgtttgacaacattatttgcaacacatcc 22609461  T
Q  439 ctcccatgcgagggggtgcacggaacgaaagagaccggttcaaacgaaacccaacgtctctttccacattcctgcaataaactcacaggcggttacactt 538  Q
    || || |||||||||||||||||| |||  ||||  |||||||||||| | | |  ||||| | ||  |||  ||||||||||| | | ||||||||| |    
T  22609462 cttccctgcgagggggtgcacggagcgagcgagattggttcaaacgaaccacgatatctctctgcatgttcacgcaataaactctctgtcggttacacat 22609561  T
Q  539 cccacaatttcgtaaccgtcagagtaaggtgtg--ccattacaacggctctgtagccctccacctctata 606  Q
    | ||| |||||||||||| |||||  |||||||  |||| |||||| ||||| | |||||||||||||||    
T  22609562 ctcacgatttcgtaaccgccagagccaggtgtgtaccatcacaacgactctgcaaccctccacctctata 22609631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 335 - 618
Target Start/End: Complemental strand, 24060893 - 24060609
Alignment:
Q  335 atattgttctggaccggccaaaaggatctttgatccatttatttaggctcaataccatctaaaacccaaacaccacgtttgacaaaattactcgcgacac 434  Q
    |||| |||||||||||| |||||||| |||||  ||||||| |||||| |||||| ||| |||  | ||| |||||||| |  || |||||| |||||||    
T  24060893 atatagttctggaccggtcaaaaggagctttggcccatttacttaggcccaatacaatccaaagtcgaaataccacgttaggaaacattacttgcgacac 24060794  T
Q  435 acccctcccatgcgaggg-ggtgcacggaacgaaagagaccggttcaaacgaaacccaacgtctctttccacattcctgcaataaactcacaggcggtta 533  Q
    |||||| ||  ||||||| |||||||||| | |   |||||||||| |||||| | |||| ||||| | ||  |||||||||||| ||| | ||| ||||    
T  24060793 accccttccccgcgagggaggtgcacggagcaagcaagaccggttctaacgaaccacaacatctctctgcatgttcctgcaataatctctctggcagtta 24060694  T
Q  534 cacttcccacaatttcgtaaccgtcagagtaaggtgtgccattacaacggctctgtagccctccacctctataaataggggactc 618  Q
    ||||||| || |||| ||||||| |||||   |||||||||| |||||||||||| ||||||||||||||||| ||| |||||||    
T  24060693 cacttcctacgattttgtaaccgccagagcctggtgtgccatcacaacggctctgcagccctccacctctatatataagggactc 24060609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 384 - 642
Target Start/End: Complemental strand, 24034051 - 24033789
Alignment:
Q  384 caataccatctaaaacccaaacaccacgtttgacaaaattactcgcgacacacccct--cccatgcgagggggtgcacggaacgaaagagaccggttcaa 481  Q
    |||||| ||| ||| || |||||||||||| | |||| ||||| ||| |||||||||  ||||   | |||||||||||||   || ||||| |||||||    
T  24034051 caatacaatccaaatcctaaacaccacgttcggcaaagttacttgcgtcacacccctttcccacaag-gggggtgcacggagaaaacgagactggttcaa 24033953  T
Q  482 acgaaacccaacgtctctttccacattcctgcaataaactcacaggcggttacacttcccacaatttcgtaaccgtcagagtaaggtgtgccattacaac 581  Q
    ||||| | ||| |||||| | ||| |||| ||||||||||| | ||||||||||||| |||| |||||||||||| || ||| | |||||||||||||||    
T  24033952 acgaaccacaatgtctctctgcacgttcccgcaataaactctctggcggttacactttccacgatttcgtaaccgccaaagtcaagtgtgccattacaac 24033853  T
Q  582 ggctctgtagccctccacct---ctataaataggggactcaatgtagtccccaaggtataatct 642  Q
    ||||||| | ||||||||||    ||||| |||||||||||  | ||||||||| ||| |||||    
T  24033852 ggctctgcaaccctccacctatattataactaggggactcatagcagtccccaatgtagaatct 24033789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 339 - 642
Target Start/End: Original strand, 33273391 - 33273679
Alignment:
Q  339 tgttctggaccggccaaaaggatctttgatccatttatttaggctcaataccatctaaaacccaaacaccacgtttgacaaaattactcgcgacacaccc 438  Q
    |||| ||||||| |||||||||||||||  ||||||| ||||||  ||||| ||| ||| ||||||||||||||||| |||| ||||| || |||||| |    
T  33273391 tgttatggaccgaccaaaaggatctttggcccatttacttaggcctaatactatccaaagcccaaacaccacgtttggcaaatttacttgcaacacactc 33273490  T
Q  439 ctcccatgcgaggggg-tgcacggaacgaaagagaccggttcaaacgaaacccaacgtctctttccacattcctgcaataaactcacaggcggttacact 537  Q
     || |  || |||||| |||  ||| |||   ||||||||||||||||  | |||||||||| | ||| |||| |||||||  ||   ||||||||||||    
T  33273491 ttctcccgcaaggggggtgcgaggagcgagcaagaccggttcaaacgagccacaacgtctctctgcacgttcccgcaataagttctatggcggttacact 33273590  T
Q  538 tcccacaatttcgtaaccgtcagagtaaggtgtgccattacaacggctctgtagccctccacctctataaataggggactcaatgtagtccccaaggtat 637  Q
    |||||| |       |||         | |||||||||||||||||||||| | ||||||||||||||||||||||||||||  | |||||||||||||     
T  33273591 tcccacga-------acc---------aagtgtgccattacaacggctctgcaaccctccacctctataaataggggactcataggagtccccaaggtag 33273674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 363 - 520
Target Start/End: Original strand, 10532633 - 10532791
Alignment:
Q  363 tttgatccatttatttaggctcaataccatctaaaacccaaacaccacgtttgacaaaattactcgcgacacacccctcccatgcgaggggg-tgcacgg 461  Q
    ||||| ||||||| |||||| |||||||||  ||| | ||||| ||||||||| ||||  |||| ||| |||||||||  ||||| |||||| | ||||     
T  10532633 tttgacccatttacttaggcccaataccattcaaagctcaaacgccacgtttggcaaagatacttgcggcacaccccttacatgcaaggggggtacacga 10532732  T
Q  462 aacgaaagagaccggttcaaacgaaacccaacgtctctttccacattcctgcaataaac 520  Q
    | |||||||||  |||||||||||| | |||||||||| ||||| ||||||||||||||    
T  10532733 agcgaaagagattggttcaaacgaaccacaacgtctctctccacgttcctgcaataaac 10532791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 590 - 663
Target Start/End: Complemental strand, 1788729 - 1788656
Alignment:
Q  590 agccctccacctctataaataggggactcaatgtagtccccaaggtataatctttctttctctaaaaccctcac 663  Q
    ||||||||||||||||||||||| ||||||||| |||| |||||||| |||||||||| |||| ||||||||||    
T  1788729 agccctccacctctataaataggagactcaatgcagtcaccaaggtagaatctttcttcctctcaaaccctcac 1788656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 384 - 499
Target Start/End: Complemental strand, 17775905 - 17775790
Alignment:
Q  384 caataccatctaaaacccaaacaccacgtttgacaaaattactcgcgacacacccctcccatgcgagggggtgcacggaacgaaagagaccggttcaaac 483  Q
    |||||| ||| ||| |||||||| |||||||| |||| ||||| ||||||||||||| |||  | |||||||| ||||| |||||||||| ||||||| |    
T  17775905 caatacaatccaaagcccaaacatcacgtttggcaaagttacttgcgacacaccccttccacacaagggggtgtacggagcgaaagagactggttcaatc 17775806  T
Q  484 gaaacccaacgtctct 499  Q
    ||| | ||||||||||    
T  17775805 gaaccacaacgtctct 17775790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 339 - 440
Target Start/End: Original strand, 7454521 - 7454622
Alignment:
Q  339 tgttctggaccggccaaaaggatctttgatccatttatttaggctcaataccatctaaaacccaaacaccacgtttgacaaaattactcgcgacacaccc 438  Q
    ||||||||||||||||||||||||||||  | ||||| |||||| ||| || ||| ||| ||||||| ||||||||| |||| ||||| || ||||||||    
T  7454521 tgttctggaccggccaaaaggatctttggcctatttacttaggcccaacacaatccaaagcccaaactccacgtttggcaaacttacttgcaacacaccc 7454620  T
Q  439 ct 440  Q
    ||    
T  7454621 ct 7454622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 469 - 561
Target Start/End: Complemental strand, 45504008 - 45503914
Alignment:
Q  469 gagaccggttcaaacgaaacccaacgtctc--tttccacattcctgcaataaactcacaggcggttacacttcccacaatttcgtaaccgtcaga 561  Q
    |||||| |||||||||||   |||||||||  ||||||| ||||||| |  | ||||| ||||||||||||||  || |||||||||||||||||    
T  45504008 gagacctgttcaaacgaacagcaacgtctccttttccactttcctgccaatatctcaccggcggttacacttcttacgatttcgtaaccgtcaga 45503914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0265 (Bit Score: 190; Significance: 1e-103; HSPs: 3)
Name: scaffold0265
Description:

Target: scaffold0265; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 343 - 663
Target Start/End: Complemental strand, 15204 - 14877
Alignment:
Q  343 ctggaccggccaaaaggatctttgatccatttatttaggctcaataccatctaaaacccaaacaccacgtttgacaaaattactcgcgacacacccctcc 442  Q
    ||||||||||||||||||||||||  ||||| | |||||| || ||| ||| ||| ||||||||||||||||| |||||||||||||||||||||||| |    
T  15204 ctggaccggccaaaaggatctttggcccattcacttaggcccagtactatccaaagcccaaacaccacgtttggcaaaattactcgcgacacaccccttc 15105  T
Q  443 catgcgaggggg-------tgcacggaacgaaagagaccggttcaaacgaaacccaacgtctctttccacattcctgcaataaactcacaggcggttaca 535  Q
    || | |||||||       |||||||||||||||||| ||||||||||||| |||| ||||||||||||| |||| ||||||||||||||||| ||||||    
T  15104 cacgtgaggggggggggggtgcacggaacgaaagagatcggttcaaacgaaccccagcgtctctttccacgttcccgcaataaactcacaggctgttaca 15005  T
Q  536 cttcccacaatttcgtaaccgtcagagtaaggtgtgccattacaacggctctgtagccctccacctctataaataggggactcaatgtagtccccaaggt 635  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||||||||||  ||| ||||||| |||||||||||||||||||| ||||||||||||    
T  15004 cttcccacgatttcgtaaccgtcagagttaggtgtgccattacaacggctctgcggccatccacctttataaataggggactcaatgcagtccccaaggt 14905  T
Q  636 ataatctttctttctctaaaaccctcac 663  Q
    | |||||||||| |||||||||||||||    
T  14904 agaatctttcttcctctaaaaccctcac 14877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0265; HSP #2
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 339 - 528
Target Start/End: Complemental strand, 17384 - 17194
Alignment:
Q  339 tgttctggaccggccaaaaggatctttgatccatttatttaggctcaataccatctaaaacccaaacaccacgtttgacaaaattactcgcgacacaccc 438  Q
    |||||||||||||||||||| |||||||  ||||| | |||||| || ||||||| ||| ||||||||||||||||| |||||||||||| |||||||||    
T  17384 tgttctggaccggccaaaagaatctttggcccattcacttaggcccagtaccatccaaatcccaaacaccacgtttggcaaaattactcgtgacacaccc 17285  T
Q  439 ctcccatgcga-gggggtgcacggaacgaaagagaccggttcaaacgaaacccaacgtctctttccacattcctgcaataaactcacaggc 528  Q
    || ||| |||| |||||||||||||||||||||||| |||||||||||| |||||||||||||||||| |||| |||||||||||||||||    
T  17284 cttccacgcgaggggggtgcacggaacgaaagagactggttcaaacgaaccccaacgtctctttccacgttcccgcaataaactcacaggc 17194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0265; HSP #3
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 565 - 660
Target Start/End: Complemental strand, 17190 - 17095
Alignment:
Q  565 aggtgtgccattacaacggctctgtagccctccacctctataaataggggactcaatgtagtccccaaggtataatctttctttctctaaaaccct 660  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||| ||||||||||| |||| |||||||| |||||||||| ||||||||||||    
T  17190 aggtgtgccattacaacagctctgcagccctccacctctataaatatgggactcaatgcagtctccaaggtagaatctttcttcctctaaaaccct 17095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0362 (Bit Score: 189; Significance: 1e-102; HSPs: 1)
Name: scaffold0362
Description:

Target: scaffold0362; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 338 - 663
Target Start/End: Original strand, 7217 - 7543
Alignment:
Q  338 ttgttctggaccggccaaaaggatctttgatccatttatttaggctcaataccatctaaaacccaaacaccacgtttgacaaaattactcgcgacacacc 437  Q
    ||||| ||||||||| |||||||||||||  ||||||||||| |  ||||| |||| ||| ||||||||||| ||||| |||||||||||||||||||||    
T  7217 ttgttttggaccggctaaaaggatctttggcccatttatttatgtccaatatcatccaaagcccaaacaccaagtttggcaaaattactcgcgacacacc 7316  T
Q  438 cctcccatgcgaggggg--tgcacggaacgaaagagaccggttcaaacgaaacccaacgtctctttccacattcctgcaataaactcacaggcggttaca 535  Q
    ||  |||  ||||||||  ||||||||||||||||||| |||||||||||| |||||||||||||||||| |||| ||||||||||||||||| ||||||    
T  7317 ccctccacacgagggggggtgcacggaacgaaagagactggttcaaacgaaccccaacgtctctttccacgttcccgcaataaactcacaggcagttaca 7416  T
Q  536 cttcccacaatttcgtaaccgtcagagtaaggtgtgccattacaacggctctgtagccctccacctctataaataggggactcaatgtagtccccaaggt 635  Q
    ||||| || |||||||||| |||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||| | ||||||||||    
T  7417 cttccaacgatttcgtaac-gtcagagtaaggtgtgccattacaacggctttgcagccctccacctctataaataggggactcaatgcaatccccaaggt 7515  T
Q  636 ataatctttctttctctaaaaccctcac 663  Q
    | |||||||||| |||| ||||||||||    
T  7516 agaatctttcttcctctcaaaccctcac 7543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 185; Significance: 1e-100; HSPs: 15)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 339 - 647
Target Start/End: Complemental strand, 27347499 - 27347191
Alignment:
Q  339 tgttctggaccggccaaaaggatctttgatccatttatttaggctcaataccatctaaaacccaaacaccacgtttgacaaaattactcgcgacacaccc 438  Q
    ||||||||||||| ||||||||||||||  ||||||| ||| || |||||||||| ||| |||||||| |||||||| ||||||||||||||||||||||    
T  27347499 tgttctggaccggtcaaaaggatctttggcccatttacttaagcccaataccatccaaagcccaaacatcacgtttggcaaaattactcgcgacacaccc 27347400  T
Q  439 ctcccatgcgagggggtgcacggaacgaaagagaccggttcaaacgaaacccaacgtctctttccacattcctgcaataaactcacaggcggttacactt 538  Q
    || ||||| ||||||||||||  |||||||||||| |||||||||||| |||||||||||||||||| |||| |||||||||||| |||| |||||||||    
T  27347399 cttccatgagagggggtgcacataacgaaagagactggttcaaacgaaccccaacgtctctttccacgttcccgcaataaactcataggcagttacactt 27347300  T
Q  539 cccacaatttcgtaaccgtcagagtaaggtgtgccattacaacggctctgtagccctccacctctataaataggggactcaatgtagtccccaaggtata 638  Q
    ||||  |||||||||||||||| || ||||||||||||||||||||| ||||||||||||| |||||| |||||||| |||||| ||||||||||||| |    
T  27347299 cccatgatttcgtaaccgtcagtgttaggtgtgccattacaacggctttgtagccctccacgtctatacataggggattcaatgcagtccccaaggtaga 27347200  T
Q  639 atctttctt 647  Q
    |||| ||||    
T  27347199 atctctctt 27347191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 335 - 663
Target Start/End: Original strand, 41266061 - 41266391
Alignment:
Q  335 atattgttctggaccggccaaaaggatctttgatccatttatttaggctcaataccatctaaaacccaaacaccacgtttgacaaaattactcgcgacac 434  Q
    ||||||||||||||||| ||||||||| || || ||||||| |||||| |||||| ||| |||| |||||||||| ||||| |||| ||||| || ||||    
T  41266061 atattgttctggaccggtcaaaaggattttagacccatttacttaggcccaatacgatccaaaatccaaacaccatgtttggcaaagttacttgcaacac 41266160  T
Q  435 acccc-tcccatgcgagggggtgcacggaacgaaagagaccggttcaaacgaaacccaacgtctctttccacattcctgcaataaactcacaggcggtta 533  Q
     |||| |  || || | |||||||||||| |||| | ||| |||||||||||| | |||||||||| | ||| |||| ||||||||||| | ||||||||    
T  41266161 cccccctttcaggcaatggggtgcacggagcgaa-gtgactggttcaaacgaaccacaacgtctctctgcacgttcccgcaataaactctcgggcggtta 41266259  T
Q  534 cacttcccacaatttcgtaaccgtcagagtaaggtgtgccattacaacggctctgtagccctccacctctataaataggggactcaatgtagtccccaag 633  Q
    |||||| ||| || ||||||||| |||||  |||||||||||||||||||||||| ||||||||||||||||||||||||||||||  | ||||||||||    
T  41266260 cacttctcacgatatcgtaaccgccagagccaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcacagcagtccccaag 41266359  T
Q  634 gtataatc--tttctttctctaaaaccctcac 663  Q
    ||| ||||  | |||| |||||||||||||||    
T  41266360 gtagaatctatctcttcctctaaaaccctcac 41266391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 339 - 642
Target Start/End: Complemental strand, 3770591 - 3770287
Alignment:
Q  339 tgttctggaccggccaaaaggatctttgatccatttatttaggctcaataccatctaaaacccaaacaccacgtttgacaaaattactcgcgacacaccc 438  Q
    |||||||||||||||||||||| |||||  ||||||| |||||| |||||| ||  ||| ||||||||||||||||| |||| ||||| || ||||||||    
T  3770591 tgttctggaccggccaaaaggacctttggcccatttacttaggcccaatacaattcaaagcccaaacaccacgtttggcaaagttacttgcaacacaccc 3770492  T
Q  439 ctcccatgcgaggggg-tgcacggaacgaaagagaccggttcaaacgaaacccaacgtctctttccacattcctgcaataaactcacaggcggttacact 537  Q
    || |||  | |||||| |||| ||| ||| |||||| |||||||||||| | |||||||||| | ||| || | ||||||||||| |  |||||||||||    
T  3770491 cttccactcaaggggggtgcatggagcgagagagactggttcaaacgaacctcaacgtctctctgcacgtttccgcaataaactctctagcggttacact 3770392  T
Q  538 tcccacaatttcgtaaccgtcagagtaaggtgtgccattacaacggctctgtagccctccacctctataaataggggactcaatgtagtccccaaggtat 637  Q
    | |||| |||| ||||||| |||||  |||||||||||||||||||||||| |||||||||||||||||||||||||| |||    |||||||||||||     
T  3770391 ttccacgattttgtaaccgccagagccaggtgtgccattacaacggctctgcagccctccacctctataaataggggattcacaacagtccccaaggtag 3770292  T
Q  638 aatct 642  Q
    |||||    
T  3770291 aatct 3770287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 339 - 642
Target Start/End: Original strand, 23755687 - 23755991
Alignment:
Q  339 tgttctggaccggccaaaaggatctttgatccatttatttaggctcaataccatctaaaacccaaacaccacgtttgacaaaattactcgcgacacaccc 438  Q
    |||||||||||||||||||||| |||||  |||||||  ||||| |||||| ||| ||| ||||||||||| |||||  ||| ||||| || ||||||||    
T  23755687 tgttctggaccggccaaaaggacctttggcccatttacctaggcccaatacaatccaaagcccaaacaccatgtttggtaaagttacttgcaacacaccc 23755786  T
Q  439 ctcccatgcgagggg-gtgcacggaacgaaagagaccggttcaaacgaaacccaacgtctctttccacattcctgcaataaactcacaggcggttacact 537  Q
    || ||| || ||||| ||||||||| |||||| ||| |||||||| ||| | |||||||||| | ||| |||| |||||||||||   ||||||||||||    
T  23755787 cttccaagcaaggggggtgcacggagcgaaagtgactggttcaaaagaaccacaacgtctctctgcacgttcccgcaataaactctatggcggttacact 23755886  T
Q  538 tcccacaatttcgtaaccgtcagagtaaggtgtgccattacaacggctctgtagccctccacctctataaataggggactcaatgtagtccccaaggtat 637  Q
    |||||| ||||||||||||  ||||  |||||||||||||||||||||||  |||| |||||||||||||||||||||||||    |||||||||||||     
T  23755887 tcccacgatttcgtaaccgctagagccaggtgtgccattacaacggctctacagccttccacctctataaataggggactcacaacagtccccaaggtag 23755986  T
Q  638 aatct 642  Q
    |||||    
T  23755987 aatct 23755991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 338 - 642
Target Start/End: Complemental strand, 3105536 - 3105231
Alignment:
Q  338 ttgttctggaccggccaaaaggatctttgatccatttatttaggctcaataccatctaaaacccaaacaccacgtttgacaaaattactcgcgacacacc 437  Q
    ||||||||||| ||||||||||| ||||  |||||||| |||||| ||| || ||| ||| ||||||||||||||||||||| |||||| ||||||||||    
T  3105536 ttgttctggactggccaaaaggacctttagtccatttacttaggcccaacacaatccaaagcccaaacaccacgtttgacaacattacttgcgacacacc 3105437  T
Q  438 cc---tcccatgcgagggggtgcacggaacgaaagagaccggttcaaacgaaacccaacgtctctttccacattcctgcaataaactcacaggcggttac 534  Q
    ||   |||||  | |||| |||||| || |||  |||||||||||||||||  | |||||||||| | ||| |||| ||||||||||| | |||||||||    
T  3105436 ccctttccca--caagggagtgcacagagcgagcgagaccggttcaaacgagccacaacgtctctctgcacgttcccgcaataaactctctggcggttac 3105339  T
Q  535 acttcccacaatttcgtaaccgtcagagtaaggtgtgccattacaacggctctgtagccctccacctctataaataggggactcaatgtagtccccaagg 634  Q
    ||||||||| ||||| ||||| | ||||| ||||||| |||||||||||||||  |  |||||||||||||||||| ||||||||  | |||||||||||    
T  3105338 acttcccacgatttcataaccatgagagttaggtgtgtcattacaacggctctacaatcctccacctctataaatatgggactcatagcagtccccaagg 3105239  T
Q  635 tataatct 642  Q
    || |||||    
T  3105238 tagaatct 3105231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 339 - 642
Target Start/End: Original strand, 25133793 - 25134106
Alignment:
Q  339 tgttctggaccggccaaaaggatctttgatccatttatttaggctcaataccatctaaaacccaaacaccacgtttgacaaaattactcgcgacacaccc 438  Q
    |||||||||| |||||||| ||||||||| ||||||| |||||| || ||| ||| ||| ||||||||||||||||| |||| ||||| |||||||||||    
T  25133793 tgttctggacgggccaaaaagatctttgacccatttacttaggcccattacaatccaaagcccaaacaccacgtttggcaaagttacttgcgacacaccc 25133892  T
Q  439 ctcccatgcgagggg----------gtgcacggaacgaaagagaccggttcaaacgaaacccaacgtctctttccacattcctgcaataaactcacaggc 528  Q
    ||  | |   |||||          ||||||||| | |  ||||| |||||||||||| | |||||||||||| ||| |||| ||||||||||| | |||    
T  25133893 ctttcctaaaaggggggggtggggggtgcacggagcaagcgagactggttcaaacgaaccacaacgtctctttgcacgttcccgcaataaactctctggc 25133992  T
Q  529 ggttacacttcccacaatttcgtaaccgtcagagtaaggtgtgccattacaacggctctgtagccctccacctctataaataggggactcaatgtagtcc 628  Q
    |||||||||| |||| |||||||||||| |||||  |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||  | |||||    
T  25133993 ggttacacttaccacgatttcgtaaccgccagagccaggtgtgccactacaacggctctgcagccctccacctctataaataggggactcatagcagtcc 25134092  T
Q  629 ccaaggtataatct 642  Q
    | |||||| |||||    
T  25134093 ctaaggtagaatct 25134106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 339 - 636
Target Start/End: Complemental strand, 19093051 - 19092754
Alignment:
Q  339 tgttctggaccggccaaaaggatctttgatccatttatttaggctcaataccatctaaaacccaaacaccacgtttgacaaaattactcgcgacacaccc 438  Q
    ||||||||| ||| ||||||||  ||||||||||||| |||||| |||||  ||  ||| ||||||||||| |||||  || |||||| |||||||| ||    
T  19093051 tgttctggatcggacaaaaggagatttgatccatttacttaggcccaatattattcaaagcccaaacaccatgtttggtaacattacttgcgacacatcc 19092952  T
Q  439 ctcccatgcgagggggtgcacggaacgaaagagaccggttcaaacgaaacccaacgtctctttccacattcctgcaataaactcacaggcggttacactt 538  Q
    || |    |||||||||||||||| ||||  ||||  ||||||||||| | |||||||||| | ||| |||| ||||||| ||| | |||||||||||||    
T  19092951 cttctccacgagggggtgcacggagcgaacaagactagttcaaacgaaccacaacgtctctctgcacgttcccgcaataatctctctggcggttacactt 19092852  T
Q  539 cccacaatttcgtaaccgtcagagtaaggtgtgccattacaacggctctgtagccctccacctctataaataggggactcaatgtagtccccaaggta 636  Q
    ||||||| |||| |||||  |||||  |||||| |||||||||||||||| ||||| ||||||||||| ||||||||||||  | |||||||||||||    
T  19092851 cccacaagttcgaaaccgcgagagtctggtgtgtcattacaacggctctgcagccccccacctctatatataggggactcatagcagtccccaaggta 19092754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 384 - 642
Target Start/End: Original strand, 42534036 - 42534295
Alignment:
Q  384 caataccatctaaaacccaaacaccacgtttgacaaaattactcgcgacacacccct--cccatgcgagggggtgcacggaacgaaagagaccggttcaa 481  Q
    |||||| ||| ||| ||||||||||||||||| |||  ||||| ||||||| |||||  ||||   | ||||||||||| | |||  |||||| ||||||    
T  42534036 caatacaatccaaagcccaaacaccacgtttgtcaaccttacttgcgacactcccctttcccacaag-gggggtgcacgtagcgagcgagacctgttcaa 42534134  T
Q  482 acgaaacccaacgtctctttccacattcctgcaataaactcacaggcggttacacttcccacaatttcgtaaccgtcagagtaaggtgtgccattacaac 581  Q
    ||||  | |||||||||| | ||| |||| ||||||||||| | |||||||||||||||||| |||||||||||| |||||  || ||||||||||||||    
T  42534135 acgagccacaacgtctctctgcacgttcccgcaataaactctctggcggttacacttcccacgatttcgtaaccgccagagccagatgtgccattacaac 42534234  T
Q  582 ggctctgtagccctccacctctataaataggggactcaatgtagtccccaaggtataatct 642  Q
    ||||||| ||||||||||||||||||||||||||||||  | ||||||||||||| |||||    
T  42534235 ggctctgcagccctccacctctataaataggggactcatagcagtccccaaggtagaatct 42534295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 452 - 642
Target Start/End: Complemental strand, 23930014 - 23929824
Alignment:
Q  452 gggtgcacggaacgaaagagaccggttcaaacgaaacccaacgtctctttccacattcctgcaataaactcacaggcggttacacttcccacaatttcgt 551  Q
    ||||||||||| |||  |||||||||||||| ||| | ||| |||||| | ||| ||||  |||||||||| | |||||||||||||||||| ||| |||    
T  23930014 gggtgcacggagcgagcgagaccggttcaaatgaaccacaatgtctctctgcacgttcccacaataaactctccggcggttacacttcccacgattccgt 23929915  T
Q  552 aaccgtcagagtaaggtgtgccattacaacggctctgtagccctccacctctataaataggggactcaatgtagtccccaaggtataatct 642  Q
    ||||| |||||  |||||||||||||||||||||||| |||||||||||||| || |||||||||||| || ||||||||||||| |||||    
T  23929914 aaccgccagagccaggtgtgccattacaacggctctgcagccctccacctctttatataggggactcactgcagtccccaaggtaaaatct 23929824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 339 - 618
Target Start/End: Original strand, 26154851 - 26155131
Alignment:
Q  339 tgttctggaccggccaaaaggatctttgatccatttatttaggctcaataccatctaaaacccaaacaccacgtttgacaaaattactcgcgacacaccc 438  Q
    ||||||||| | | ||||||||  ||||| ||||||| |||||  |||||  || ||||   ||||||||||||||| |||| ||||| |||||||| ||    
T  26154851 tgttctggatcagtcaaaaggacttttgacccatttacttaggtccaatataatttaaagttcaaacaccacgtttggcaaagttacttgcgacacatcc 26154950  T
Q  439 ctcccatgcgagggg-gtgcacggaacgaaagagaccggttcaaacgaaacccaacgtctctttccacattcctgcaataaactcacaggcggttacact 537  Q
    || |||  | ||||| ||||||||| |||||||||   ||||||||||| | |||| |||||||  || |||| ||||||||| | | ||||||||||||    
T  26154951 cttccacacaaggggggtgcacggagcgaaagagattagttcaaacgaaccacaacatctctttgtacgttcccgcaataaacgctctggcggttacact 26155050  T
Q  538 tcccacaatttcgtaaccgtcagagtaaggtgtgccattacaacggctctgtagccctccacctctataaataggggactc 618  Q
    |||||| |||||||||||  || ||  ||||||||||||| ||||||| || |||||||||||||||||||||||||||||    
T  26155051 tcccacgatttcgtaaccaccatagccaggtgtgccattataacggctatgcagccctccacctctataaataggggactc 26155131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 476 - 619
Target Start/End: Complemental strand, 29568507 - 29568365
Alignment:
Q  476 gttcaaacgaaacccaacgtctctttccacattcctgcaataaactcacaggcggttacacttcccacaatttcgtaaccgtcagagtaaggtgtgccat 575  Q
    ||||||||||  | |||||||||| | ||| |||| ||||||||||| |  ||||||||||||||||| |||||||||||| |||||  |||||| ||||    
T  29568507 gttcaaacgagccacaacgtctctctacacgttcc-gcaataaactctctagcggttacacttcccacgatttcgtaaccgccagagccaggtgtaccat 29568409  T
Q  576 tacaacggctctgtagccctccacctctataaataggggactca 619  Q
    |||||||||||||||||||||||||||||||||| |||||||||    
T  29568408 tacaacggctctgtagccctccacctctataaattggggactca 29568365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 339 - 440
Target Start/End: Complemental strand, 23933010 - 23932909
Alignment:
Q  339 tgttctggaccggccaaaaggatctttgatccatttatttaggctcaataccatctaaaacccaaacaccacgtttgacaaaattactcgcgacacaccc 438  Q
    |||||| |||||||||||||||||||||  ||||||| ||||||  ||||| ||| ||| |||||||||||||| |||||| |||||| |||||||||||    
T  23933010 tgttctagaccggccaaaaggatctttggcccatttacttaggcctaatacaatccaaagcccaaacaccacgtctgacaacattacttgcgacacaccc 23932911  T
Q  439 ct 440  Q
    ||    
T  23932910 ct 23932909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 338 - 500
Target Start/End: Original strand, 22452688 - 22452849
Alignment:
Q  338 ttgttctggaccggccaaaaggatctttgatccatttatttaggctcaataccatctaaaacccaaacaccacgtttgacaaaattactcgcgacacacc 437  Q
    ||||||||||||||  ||||||||| | |  ||||||  ||||||||||||  ||| ||| |||||| |||||||||||||| ||||||||| |||||||    
T  22452688 ttgttctggaccggttaaaaggatcctaggcccatttgcttaggctcaatataatccaaa-cccaaataccacgtttgacaacattactcgcaacacacc 22452786  T
Q  438 cctcccatgcgagggg-gtgcacggaacgaaagagaccggttcaaacgaaacccaacgtctctt 500  Q
    | ||||  |||||||| ||||||||| | |  |||||| ||||||| |||   |||||||||||    
T  22452787 cttccc-cgcgaggggagtgcacggagcaagcgagaccagttcaaatgaactgcaacgtctctt 22452849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 590 - 642
Target Start/End: Original strand, 26159154 - 26159206
Alignment:
Q  590 agccctccacctctataaataggggactcaatgtagtccccaaggtataatct 642  Q
    ||||||||||||||||||||||||||||||| | ||| ||||||||| |||||    
T  26159154 agccctccacctctataaataggggactcaaagcagttcccaaggtagaatct 26159206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 336 - 366
Target Start/End: Original strand, 42534002 - 42534032
Alignment:
Q  336 tattgttctggaccggccaaaaggatctttg 366  Q
    |||||||||||||||||||||||||||||||    
T  42534002 tattgttctggaccggccaaaaggatctttg 42534032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 167; Significance: 4e-89; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 167; E-Value: 4e-89
Query Start/End: Original strand, 339 - 636
Target Start/End: Original strand, 54473 - 54770
Alignment:
Q  339 tgttctggaccggccaaaaggatctttgatccatttatttaggctcaataccatctaaaacccaaacaccacgtttgacaaaattactcgcgacacaccc 438  Q
    ||||||||||||||||||||||||||||  ||||||| |||| | ||||||  |  ||| ||||||  ||||||||| |||||||||||| |||||||||    
T  54473 tgttctggaccggccaaaaggatctttggcccatttacttagacccaatacactacaaagcccaaaatccacgtttggcaaaattactcgagacacaccc 54572  T
Q  439 ctcccatgcgagggggt-gcacggaacgaaagagaccggttcaaacgaaacccaacgtctctttccacattcctgcaataaactcacaggcggttacact 537  Q
    |||| | |||||||||  |||||||||||| ||||| ||||||||||||||||||||||||| ||||| |||| |||||||||||||||| |||||||||    
T  54573 ctcc-acgcgaggggggcgcacggaacgaaggagactggttcaaacgaaacccaacgtctctctccacgttcccgcaataaactcacaggtggttacact 54671  T
Q  538 tcccacaatttcgtaaccgtcagagtaaggtgtgccattacaacggctctgtagccctccacctctataaataggggactcaatgtagtccccaaggta 636  Q
    |||||  |||||||||||||||||||||||||| |||||||||||||| || ||||||||||||||||||||||||||||||||| |||||| ||||||    
T  54672 tcccatgatttcgtaaccgtcagagtaaggtgtaccattacaacggctatgcagccctccacctctataaataggggactcaatgcagtcccaaaggta 54770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 125; Significance: 5e-64; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 339 - 642
Target Start/End: Original strand, 29926 - 30230
Alignment:
Q  339 tgttctggaccggccaaaaggatctttgatccatttatttaggctcaataccatctaaaacccaaacaccacgtttgacaaaattactcgcgacacaccc 438  Q
    |||||||||||||||||||||| |||||  ||||||| |||||| ||| || ||| ||| |||||||| |||||||| |||| ||||  || ||||||||    
T  29926 tgttctggaccggccaaaaggacctttggcccatttaattaggcccaacacaatccaaagcccaaacagcacgtttggcaaagttacatgcaacacaccc 30025  T
Q  439 ctcccatgcgaggg-ggtgcacggaacgaaagagaccggttcaaacgaaacccaacgtctctttccacattcctgcaataaactcacaggcggttacact 537  Q
    || |||||| |||| |||||||||| |||||||||| |||||||||||| | |||||||||| | ||| |||| |||||||| || | || |||||||||    
T  30026 cttccatgcaagggaggtgcacggagcgaaagagactggttcaaacgaaccacaacgtctctctacacgttcccgcaataaaatctctggaggttacact 30125  T
Q  538 tcccacaatttcgtaaccgtcagagtaaggtgtgccattacaacggctctgtagccctccacctctataaataggggactcaatgtagtccccaaggtat 637  Q
    ||||||||||||||||||  |||||  |||||| || |||||| ||||||| ||||||||||||||||||||| ||||||||  | |||||| ||||||     
T  30126 tcccacaatttcgtaaccaccagagccaggtgttccgttacaatggctctgcagccctccacctctataaatacgggactcacagcagtccctaaggtag 30225  T
Q  638 aatct 642  Q
    |||||    
T  30226 aatct 30230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 122; Significance: 3e-62; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 336 - 642
Target Start/End: Complemental strand, 391794 - 391486
Alignment:
Q  336 tattgttctggaccggccaaaaggatctttgatccatttatttaggctcaataccatctaaaacccaaacaccacgtttgacaaaattactcgcgacaca 435  Q
    ||||||||||||||| ||||||||| || || |||||||| |||||  |||||| ||| ||| ||||||||||||| ||| |||| ||||| || |||||    
T  391794 tattgttctggaccgaccaaaaggacctgtggtccatttacttaggtccaatacaatccaaaccccaaacaccacggttggcaaacttacttgcaacaca 391695  T
Q  436 cccc--tcccatgcgagggggtgcacggaacgaaagagaccggttcaaacgaaacccaacgtctctttccacattcctgcaataaactcacaggcggtta 533  Q
    ||||  ||||    | ||||||||||||| |||  |||||  ||||||||||| | |||||||||| | ||  |||| ||||||||||| | ||||||||    
T  391694 cccctttcccgcaagggggggtgcacggagcgagcgagactagttcaaacgaaccacaacgtctctctgcaggttcccgcaataaactctctggcggtta 391595  T
Q  534 cacttcccacaatttcgtaaccgtcagagtaaggtgtgccattacaacggctctgtagccctccacctctataaataggggactcaatgtagtccccaag 633  Q
    ||||||||| ||||||||||||| |||||  |||||||||||||||||||||||| | ||||||||||||||||||||||||||||  | ||||||||||    
T  391594 cacttcccataatttcgtaaccgccagagccaggtgtgccattacaacggctctgcaaccctccacctctataaataggggactcatagcagtccccaag 391495  T
Q  634 gtataatct 642  Q
    ||| |||||    
T  391494 gtagaatct 391486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 339 - 636
Target Start/End: Complemental strand, 381092 - 380794
Alignment:
Q  339 tgttctggaccggccaaaaggatctttgatccatttatttaggctcaataccatctaaaacccaaacaccacgtttgacaaaattactcgcgacacaccc 438  Q
    |||| |||||||||||||||||  | ||  ||||||| ||| || |||||| ||| ||| ||||||||||| | ||| |||| ||||| ||  |||||||    
T  381092 tgttatggaccggccaaaaggacatgtggcccatttacttacgcccaatacaatccaaagcccaaacaccatggttggcaaacttacttgcaccacaccc 380993  T
Q  439 ctcccatgcgaggggg-tgcacggaacgaaagagaccggttcaaacgaaacccaacgtctctttccacattcctgcaataaactcacaggcggttacact 537  Q
    ||  | ||| |||||| |||||||| |||  ||||| |||||||||||| | |||||||||| | ||| |||| |||||||| || | ||||||||||||    
T  380992 ctttcctgcaaggggggtgcacggagcgagcgagactggttcaaacgaaccacaacgtctctctacacgttcccgcaataaagtctctggcggttacact 380893  T
Q  538 tcccacaatttcgtaaccgtcagagtaaggtgtgccattacaacggctctgtagccctccacctctataaataggggactcaatgtagtccccaaggta 636  Q
    || |||||||||||||||  |||||  |||||||||||||||||||||||| ||||||||||||||||||||||||||||||  | |||||||| ||||    
T  380892 tctcacaatttcgtaacctccagagccaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcatagcagtccccatggta 380794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 117; Significance: 3e-59; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 339 - 642
Target Start/End: Complemental strand, 69004 - 68700
Alignment:
Q  339 tgttctggaccggccaaaaggatctttgatccatttatttaggctcaataccatctaaaacccaaacaccacgtttgacaaaattactcgcgacacaccc 438  Q
    ||||||| ||||||||||||||||||||  ||||||| |||||| |||||| ||  ||| |||| || ||||||||  ||| |||||| |||||||||||    
T  69004 tgttctgaaccggccaaaaggatctttggcccatttacttaggcccaatacaattcaaagcccagactccacgttttgcaacattacttgcgacacaccc 68905  T
Q  439 ctcccatgcgaggggg-tgcacggaacgaaagagaccggttcaaacgaaacccaacgtctctttccacattcctgcaataaactcacaggcggttacact 537  Q
    || |  |||||||||| |||||||| | |  |||||  ||||||||||  | ||||||||||| |||| |||| ||||||||||| |  |||||||||||    
T  68904 cttctctgcgaggggggtgcacggagcaaccgagactagttcaaacgagccacaacgtctcttcccacgttcccgcaataaactctctagcggttacact 68805  T
Q  538 tcccacaatttcgtaaccgtcagagtaaggtgtgccattacaacggctctgtagccctccacctctataaataggggactcaatgtagtccccaaggtat 637  Q
    |||||| |||||||||||| || || |||||||| ||||||||||||| || ||||||||||||||||||||||||||||||  | ||| |||||||||     
T  68804 tcccacgatttcgtaaccgccaaagcaaggtgtgtcattacaacggctttgcagccctccacctctataaataggggactcaccgcagtgcccaaggtag 68705  T
Q  638 aatct 642  Q
    |||||    
T  68704 aatct 68700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 469 - 642
Target Start/End: Complemental strand, 75045 - 74872
Alignment:
Q  469 gagaccggttcaaacgaaacccaacgtctctttccacattcctgcaataaactcacaggcggttacacttcccacaatttcgtaaccgtcagagtaaggt 568  Q
    ||||| |||||||||||  | |||||| |||   ||| |||| ||||||||||| | ||||||||||||||| || ||||| |||| | |||||  ||||    
T  75045 gagactggttcaaacgagccacaacgtgtctccgcacgttcccgcaataaactctctggcggttacacttccgacgatttcataactgccagagccaggt 74946  T
Q  569 gtgccattacaacggctctgtagccctccacctctataaataggggactcaatgtagtccccaaggtataatct 642  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||||  | | ||||||||||| |||||    
T  74945 gtgccattacaacggctctacagccctccacctctataaataggggactcaccgcattccccaaggtagaatct 74872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 117; Significance: 3e-59; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 450 - 642
Target Start/End: Original strand, 47396 - 47588
Alignment:
Q  450 gggggtgcacggaacgaaagagaccggttcaaacgaaacccaacgtctctttccacattcctgcaataaactcacaggcggttacacttcccacaatttc 549  Q
    ||||||||||||| |||||||||| |||||||||||| | |||||||||| | ||| |||| ||||||||||| | |||||||||||||||||||||||     
T  47396 gggggtgcacggagcgaaagagactggttcaaacgaaccacaacgtctctctgcacgttcccgcaataaactctctggcggttacacttcccacaatttt 47495  T
Q  550 gtaaccgtcagagtaaggtgtgccattacaacggctctgtagccctccacctctataaataggggactcaatgtagtccccaaggtataatct 642  Q
    ||||||| |||||  | |||||||||||||||||||||| ||||||||||||||||||||||||||||||| | ||||||||||||| |||||    
T  47496 gtaaccgccagagccaagtgtgccattacaacggctctgcagccctccacctctataaataggggactcaaagcagtccccaaggtagaatct 47588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 341 - 440
Target Start/End: Original strand, 56229 - 56328
Alignment:
Q  341 ttctggaccggccaaaaggatctttgatccatttatttaggctcaataccatctaaaacccaaacaccacgtttgacaaaattactcgcgacacacccct 440  Q
    |||||||| | | ||||||| |||||  ||||||| |||||| |||||| ||| ||| ||||||||||||||||| | || ||||| |||||||||||||    
T  56229 ttctggactgacaaaaaggacctttggcccatttacttaggcccaatacaatccaaagcccaaacaccacgtttggcgaagttacttgcgacacacccct 56328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 113; Significance: 7e-57; HSPs: 15)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 339 - 598
Target Start/End: Complemental strand, 19790606 - 19790346
Alignment:
Q  339 tgttctggaccggccaaaaggatctttgatccatttatttaggctcaataccatctaaaacccaaacaccacgtttgacaaaattactcgcgacacaccc 438  Q
    |||| ||||| ||||||||||||| |||  ||||||| |||||| |||||||||| ||||||||||||||  |||||  ||| ||||| ||||||| |||    
T  19790606 tgttatggactggccaaaaggatcattggcccatttacttaggcccaataccatccaaaacccaaacaccgtgtttggtaaagttacttgcgacacgccc 19790507  T
Q  439 ctcccatgcgaggggg-tgcacggaacgaaagagaccggttcaaacgaaacccaacgtctctttccacattcctgcaataaactcacaggcggttacact 537  Q
    || |||  | |||||| ||||| || |||||||||| |||||||||||| | |||||||||| | ||| ||||  |||||||||| | | ||||||||||    
T  19790506 cttccagacaaggggggtgcacagagcgaaagagactggttcaaacgaaccacaacgtctctctgcacgttcccacaataaactctctgacggttacact 19790407  T
Q  538 tcccacaatttcgtaaccgtcagagtaaggtgtgccattacaacggctctgtagccctcca 598  Q
    |||||| ||||||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  19790406 tcccacgatttcgtaaccgtcagagtcaggtgtgccattacaacggctctgcagccctcca 19790346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 339 - 644
Target Start/End: Original strand, 16852878 - 16853183
Alignment:
Q  339 tgttctggaccggccaaaaggatctttgatccatttatttaggctcaataccatctaaaacccaaacaccacgtttgacaaaattactcgcgacacacc- 437  Q
    ||||||||||||||||||||| | ||||  ||||| | |||||| |||||| ||| ||| | ||||  |||||||||  || || ||| ||||| ||||     
T  16852878 tgttctggaccggccaaaagggtttttggaccatt-acttaggcccaatacaatccaaagctcaaattccacgtttggtaacatcacttgcgacgcacca 16852976  T
Q  438 cctcccatgcgaggg-ggtgcacggaacgaaagagaccggttcaaacgaaacccaacgtctctttccacattcctgcaataaactcacaggcggttacac 536  Q
    |||| | |||||||| ||| |||||| |||  || |||||||||||| |  | |||||||||| | ||| || | ||||||||||| | |||||||||||    
T  16852977 cctctc-tgcgagggaggtacacggagcgagtgacaccggttcaaacaagccacaacgtctctctgcacgttaccgcaataaactctctggcggttacac 16853075  T
Q  537 ttcccacaatttcgtaaccgtcagagtaaggtgtgccattacaacggctctgtagccctccacctctataaataggggactcaatgtagtccccaaggta 636  Q
    ||||||| |||||||||||| |||||  |||||||||||||||||   | || ||||||||||||||||||||||||||||||||| ||||||||||| |    
T  16853076 ttcccacgatttcgtaaccgccagagccaggtgtgccattacaacatatttgcagccctccacctctataaataggggactcaatgcagtccccaaggga 16853175  T
Q  637 taatcttt 644  Q
     |||||||    
T  16853176 gaatcttt 16853183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 341 - 642
Target Start/End: Complemental strand, 22915379 - 22915079
Alignment:
Q  341 ttctggaccggccaaaaggatctttgatccatttatttaggctcaataccatctaaaacccaaacaccacgtttgacaaaattactcgcgacacacccct 440  Q
    |||| |||||| ||||||||  ||||   |||||| |||||| |||||| |||| || | |||||||||||||||||||  ||||| || |||||||||     
T  22915379 ttcttgaccggtcaaaaggacatttggctcatttacttaggcccaatacaatctgaagcgcaaacaccacgtttgacaagtttacttgcaacacaccccc 22915280  T
Q  441 cccatgcgagggggtgcacggaacgaaagagaccggttcaaacgaaacccaacgtctctttccacattcctgcaataaactcacaggcggttacacttcc 540  Q
      |  || ||||| |||||||| |||  |||||  ||||||||||| | |||||||||| | ||| |||| ||||||||||| |  || |||||||||||    
T  22915279 ttcccgcaagggg-tgcacggagcgagcgagactagttcaaacgaatcacaacgtctctcttcacgttcccgcaataaactctctagctgttacacttcc 22915181  T
Q  541 cacaatttcgtaaccgtcagagtaaggtgtgccattacaacggctctgtagccctccacctctataaataggggactcaatgtagtccccaaggtataat 640  Q
    ||| ||||| |||||| | |||  | |||| ||||||||||||||||| ||| |||||||| |||||||||||||||||  | ||||||||||||| |||    
T  22915180 cacgatttcataaccgccggagccaagtgtaccattacaacggctctgcagctctccacctttataaataggggactcatagcagtccccaaggtagaat 22915081  T
Q  641 ct 642  Q
    ||    
T  22915080 ct 22915079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 369 - 611
Target Start/End: Complemental strand, 16915007 - 16914764
Alignment:
Q  369 ccatttatttaggctcaataccatctaaaacccaaacaccacgtttgacaaaattactcgcgacacacccc-tc-ccatgcgagggggtgcacggaacga 466  Q
    ||||||| |||||| |||||| |||  | ||||||||||||||||||  ||| ||||| |||||| ||||| || || || | ||||||| ||||| | |    
T  16915007 ccatttacttaggcccaatacaatcccatacccaaacaccacgtttggaaaacttacttgcgacataccccctctccgtgag-gggggtgaacggagcaa 16914909  T
Q  467 aagagaccggttcaaacgaaacccaacgtctctttccacattcctgcaataaactcacaggcggttacacttcccacaatttcgtaaccgtcagagtaag 566  Q
     |  |||||||||||||||  | |||||||||||| ||| |||| ||||| |  || |    |||||||| |||||| |||||||||||| ||||   |     
T  16914908 gaaggaccggttcaaacgagccgcaacgtctctttgcacgttcccgcaattatttctctactggttacacctcccacgatttcgtaaccgccagaccgat 16914809  T
Q  567 gtgtgccattacaacggctctgtagccctccacctctataaatag 611  Q
     ||||||||||||| ||||||| ||||||||||||||||| ||||    
T  16914808 ctgtgccattacaatggctctgcagccctccacctctatatatag 16914764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 526 - 593
Target Start/End: Complemental strand, 44635890 - 44635823
Alignment:
Q  526 ggcggttacacttcccacaatttcgtaaccgtcagagtaaggtgtgccattacaacggctctgtagcc 593  Q
    |||||||||||||||||| |||||||||||| | || | | |||||||||||||||||||||| ||||    
T  44635890 ggcggttacacttcccacgatttcgtaaccgacggactcacgtgtgccattacaacggctctgcagcc 44635823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 571 - 643
Target Start/End: Complemental strand, 22006590 - 22006518
Alignment:
Q  571 gccattacaacggctctgtagccctccacctctataaataggggactcaatgtagtccccaaggtataatctt 643  Q
    |||||||||||| ||||| ||||||||||||||||| ||| |||||||   | ||||||||||||| ||||||    
T  22006590 gccattacaacgactctgcagccctccacctctatatataagggactcgtagcagtccccaaggtagaatctt 22006518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 571 - 643
Target Start/End: Complemental strand, 22014107 - 22014035
Alignment:
Q  571 gccattacaacggctctgtagccctccacctctataaataggggactcaatgtagtccccaaggtataatctt 643  Q
    |||||||||||| ||||| ||||||||||||||||| ||| |||||||   | ||||||||||||| ||||||    
T  22014107 gccattacaacgactctgcagccctccacctctatatataagggactcgtagcagtccccaaggtagaatctt 22014035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 399 - 486
Target Start/End: Original strand, 3559049 - 3559136
Alignment:
Q  399 cccaaacaccacgtttgacaaaattactcgcgacacacccctcccatgcgagggggtgcacggaacgaaagagaccggttcaaacgaa 486  Q
    |||||| ||| | |||| ||| ||||||||| |||||||||| ||  |||||||||||||| || | || ||||||||||||||||||    
T  3559049 cccaaataccgcatttggcaacattactcgcaacacaccccttccccgcgagggggtgcacagagcaaacgagaccggttcaaacgaa 3559136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 594 - 642
Target Start/End: Complemental strand, 1998081 - 1998033
Alignment:
Q  594 ctccacctctataaataggggactcaatgtagtccccaaggtataatct 642  Q
    |||||||||||||||||||| |||||| | ||||||||||||| |||||    
T  1998081 ctccacctctataaatagggtactcaaagcagtccccaaggtagaatct 1998033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 520 - 556
Target Start/End: Complemental strand, 3786681 - 3786645
Alignment:
Q  520 ctcacaggcggttacacttcccacaatttcgtaaccg 556  Q
    ||||| |||||||||||||||||||||||||||||||    
T  3786681 ctcactggcggttacacttcccacaatttcgtaaccg 3786645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 339 - 389
Target Start/End: Original strand, 31530488 - 31530538
Alignment:
Q  339 tgttctggaccggccaaaaggatctttgatccatttatttaggctcaatac 389  Q
    |||||||||||||||||||| |||||||| ||||||| |||| | ||||||    
T  31530488 tgttctggaccggccaaaagaatctttgacccatttacttagacccaatac 31530538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 529 - 618
Target Start/End: Original strand, 44451630 - 44451719
Alignment:
Q  529 ggttacacttcccacaatttcgtaaccgtcagagtaaggtgtgccattacaacggctctgtagccctccacctctataaataggggactc 618  Q
    ||||||||||||| | |||| ||||||||| ||   | |||||||||||||||||||||| |  |  ||||||||||| | |||||||||    
T  44451630 ggttacacttccccctattttgtaaccgtcggacacatgtgtgccattacaacggctctgcattcacccacctctatataaaggggactc 44451719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 570 - 618
Target Start/End: Complemental strand, 8733483 - 8733435
Alignment:
Q  570 tgccattacaacggctctgtagccctccacctctataaataggggactc 618  Q
    |||||||||||||| ||| |||||  ||||||||||| |||||||||||    
T  8733483 tgccattacaacggttctttagccaaccacctctatatataggggactc 8733435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 570 - 618
Target Start/End: Complemental strand, 9085724 - 9085676
Alignment:
Q  570 tgccattacaacggctctgtagccctccacctctataaataggggactc 618  Q
    |||||||||||||| ||| |||||  ||||||||||| |||||||||||    
T  9085724 tgccattacaacggttctttagccaaccacctctatatataggggactc 9085676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 594 - 642
Target Start/End: Complemental strand, 19773462 - 19773414
Alignment:
Q  594 ctccacctctataaataggggactcaatgtagtccccaaggtataatct 642  Q
    ||||||||||||||||||| ||||||  | ||||||||||||| |||||    
T  19773462 ctccacctctataaataggagactcacagcagtccccaaggtagaatct 19773414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 112; Significance: 3e-56; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 339 - 630
Target Start/End: Original strand, 16185 - 16476
Alignment:
Q  339 tgttctggaccggccaaaaggatctttgatccatttatttaggctcaataccatctaaaacccaaacaccacgtttgacaaaattactcgcgacacaccc 438  Q
    |||||||||| ||||||||||| ||||| |||||||| |||||| |||||| | | ||| ||||||||| | |||||  ||| ||||  |||||||||||    
T  16185 tgttctggactggccaaaaggacctttggtccatttacttaggcccaatacaacccaaagcccaaacactatgtttggaaaagttacatgcgacacaccc 16284  T
Q  439 ctcccatgcgagggggtgcacggaacgaaagagaccggttcaaacgaaacccaacgtctctttccacattcctgcaataaactcacaggcggttacactt 538  Q
    ||  |   | |||||||||||||| |||| ||||| |||||||||||| | |||| ||||| | ||| |||| ||||||||||| | || ||||||||||    
T  16285 ctttcccacaagggggtgcacggagcgaatgagactggttcaaacgaaccacaacatctctctgcacgttcccgcaataaactctctggtggttacactt 16384  T
Q  539 cccacaatttcgtaaccgtcagagtaaggtgtgccattacaacggctctgtagccctccacctctataaataggggactcaatgtagtcccc 630  Q
    ||||| |||| ||||||| |||||  |||||| ||||||||| ||||||| ||||||||||||||||||||||||||||||| | |||||||    
T  16385 cccacgattttgtaaccgccagagccaggtgtaccattacaatggctctgcagccctccacctctataaataggggactcaaagcagtcccc 16476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 108; Significance: 7e-54; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 341 - 611
Target Start/End: Complemental strand, 243002 - 242731
Alignment:
Q  341 ttctggaccggccaaaaggatctttgatccatttatttaggctcaataccatctaaaacccaaacaccacgtttgacaaaattactcgcgacacacccct 440  Q
    ||||| |||||||||||||| |||||  ||||||| |||||| |||||| ||||||| ||||||||||| ||||| ||| |||||| |||||||||||||    
T  243002 ttctgtaccggccaaaaggacctttgtcccatttacttaggcccaatacaatctaaagcccaaacaccaagtttggcaacattacttgcgacacacccct 242903  T
Q  441 cccatgcgagg-gggtgcacggaacgaaagagaccggttcaaacgaaacccaacgtctctttccacattcctgcaataaactcacaggcggttacacttc 539  Q
     ||  |  ||| ||||||||||| |||   ||||||||||||||||| | |||||||||||| ||| |||| |||||||||||   ||| ||||||||||    
T  242902 tccccgataggcgggtgcacggagcgagcaagaccggttcaaacgaaccacaacgtctctttgcacgttcccgcaataaactctttggcagttacacttc 242803  T
Q  540 ccacaatttcgtaaccgtcagagtaaggtgtgccattacaacggctctgtagccctccacctctataaatag 611  Q
    |||| ||| ||||||||  ||||  ||||||||||||||||||||||||  |||||||||||||||| ||||    
T  242802 ccacgattacgtaaccgcaagagccaggtgtgccattacaacggctctgccgccctccacctctatatatag 242731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 339 - 642
Target Start/End: Complemental strand, 253644 - 253340
Alignment:
Q  339 tgttctggaccggccaaaaggatctttgatccatttatttaggctcaataccatctaaaacccaaacaccacgtttgacaaaattactcgcgacacaccc 438  Q
    |||| ||||| ||||||||| | |||||  ||||||  |||||| |||||| ||| ||| ||||||||||||||||| ||| |||||  |||||||||||    
T  253644 tgttttggacaggccaaaagaacctttggcccattttcttaggcccaatacaatccaaatcccaaacaccacgtttggcaacattacgtgcgacacaccc 253545  T
Q  439 ctcccatgcgagggg-gtgcacggaacgaaagagaccggttcaaacgaaacccaacgtctctttccacattcctgcaataaactcacaggcggttacact 537  Q
    || ||  | |||||| |||||||||  |    ||||||||||||| ||| | |||| ||||| | ||| |||| ||||||||||| | ||| ||||||||    
T  253544 cttccccgagaggggagtgcacggagagtgcaagaccggttcaaatgaaccacaacatctctctgcacgttcccgcaataaactctctggcagttacact 253445  T
Q  538 tcccacaatttcgtaaccgtcagagtaaggtgtgccattacaacggctctgtagccctccacctctataaataggggactcaatgtagtccccaaggtat 637  Q
    |||||| |||||||||||| |||||  |||||||||||||||||| || || |||| ||||||| |||| |||||||||||| |  |||||||||||||     
T  253444 tcccacgatttcgtaaccgccagagccaggtgtgccattacaacgactttgcagccgtccacctttatatataggggactcactacagtccccaaggtag 253345  T
Q  638 aatct 642  Q
    |||||    
T  253344 aatct 253340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 98; Significance: 6e-48; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 339 - 619
Target Start/End: Original strand, 909 - 1190
Alignment:
Q  339 tgttctggaccggccaaaaggatctttgatccatttatttaggctcaataccatctaaaacccaaacaccacgtttgacaaaattactcgcgacacaccc 438  Q
    ||||||||||||| |||||||| |||||  ||||||| |||||  |||||| ||| ||| ||||||||||||||||  |||| ||||| ||  || ||||    
T  909 tgttctggaccggtcaaaaggacctttggcccatttacttaggtccaatacaatccaaagcccaaacaccacgtttagcaaacttacttgcagcataccc 1008  T
Q  439 ctcccatgcga-gggggtgcacggaacgaaagagaccggttcaaacgaaacccaacgtctctttccacattcctgcaataaactcacaggcggttacact 537  Q
    || |    ||| ||||||||||||| |||  ||||| |||||||||||| | |||||| ||| | ||  ||||||||||||||||   ||||||||||||    
T  1009 cttctccacgaagggggtgcacggagcgagcgagactggttcaaacgaaccacaacgtttctctgcatgttcctgcaataaactctatggcggttacact 1108  T
Q  538 tcccacaatttcgtaaccgtcagagtaaggtgtgccattacaacggctctgtagccctccacctctataaataggggactca 619  Q
    |||||| ||||||||| ||  ||||  |||||| |||||||||||||| |||||||||||||||||||||||||||||||||    
T  1109 tcccacgatttcgtaatcgctagagccaggtgttccattacaacggctatgtagccctccacctctataaataggggactca 1190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 94; Significance: 2e-45; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 343 - 619
Target Start/End: Original strand, 151164 - 151440
Alignment:
Q  343 ctggaccggccaaaaggatctttgatccatttatttaggctcaataccatctaaaacccaaacaccacgtttgacaaaattactcgcgacacacccctcc 442  Q
    ||||||||||||||||||||||||  ||||||| ||||||  ||||| ||| ||| ||||||||| ||||||| |||| ||||| ||  || |||||| |    
T  151164 ctggaccggccaaaaggatctttggcccatttacttaggcctaatacaatccaaagcccaaacactacgtttggcaaacttacttgcagcataccccttc 151263  T
Q  443 catgcga-gggggtgcacggaacgaaagagaccggttcaaacgaaacccaacgtctctttccacattcctgcaataaactcacaggcggttacacttccc 541  Q
    |   | | ||||||||||||| |||  ||||||| |||||||||| | |||||||||| |  || |||||||||||||||| | |||| || ||||||||    
T  151264 cccacaaagggggtgcacggagcgagcgagaccgattcaaacgaaccacaacgtctctctgtacgttcctgcaataaactctctggcgttt-cacttccc 151362  T
Q  542 acaatttcgtaaccgtcagagtaaggtgtgccattacaacggctctgtagccctccacctctataaataggggactca 619  Q
    || ||||||||||||  ||||  |||| | ||| ||||||||||||| ||||||||||||||||||||||||||||||    
T  151363 acgatttcgtaaccgctagagccaggtcttccactacaacggctctgcagccctccacctctataaataggggactca 151440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 86; Significance: 9e-41; HSPs: 2)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 415 - 619
Target Start/End: Complemental strand, 1863 - 1658
Alignment:
Q  415 gacaaaattactcgcgacacacccctcccatgcgagggggtgcacggaacgaaagagaccggttcaaacgaaacccaacgtctctttccacattcctgca 514  Q
    |||||| ||||| || ||| |||||| |||  | ||||||||| |||| |||||||||  |||||||||||| | |||||||||| | ||| |||| |||    
T  1863 gacaaagttacttgcaacataccccttccacacaagggggtgcccggagcgaaagagattggttcaaacgaaccacaacgtctctctgcacgttcccgca 1764  T
Q  515 ataaa-ctcacaggcggttacacttcccacaatttcgtaaccgtcagagtaaggtgtgccattacaacggctctgtagccctccacctctataaataggg 613  Q
    ||||| ||| | |||||||||||||||||| |||||||||||| |||||  | || ||||||||||||||||||| |||| |||||||||||||||||||    
T  1763 ataaaactctctggcggttacacttcccacgatttcgtaaccgccagagccaagtatgccattacaacggctctgcagccatccacctctataaataggg 1664  T
Q  614 gactca 619  Q
    ||||||    
T  1663 gactca 1658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 517 - 619
Target Start/End: Complemental strand, 15517 - 15415
Alignment:
Q  517 aaactcacaggcggttacacttcccacaatttcgtaaccgtcagagtaaggtgtgccattacaacggctctgtagccctccacctctataaataggggac 616  Q
    |||||| | |||||||||||||||||| |||| ||||||| |||||| |||  ||||||| ||||||||||| |||||||||||||||||||||||||||    
T  15517 aaactctctggcggttacacttcccacgatttagtaaccgccagagtcaggcatgccattgcaacggctctgcagccctccacctctataaataggggac 15418  T
Q  617 tca 619  Q
    |||    
T  15417 tca 15415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 85; Significance: 4e-40; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 336 - 619
Target Start/End: Complemental strand, 12654 - 12373
Alignment:
Q  336 tattgttctggaccggccaaaaggatctttgatccatttatttaggctcaataccatctaaaacccaaacaccacgtttgacaaaattactcgcgacaca 435  Q
    ||||||||||||||||||||||||| |||||  ||||||| ||||||  ||||| ||  ||| ||||||||||||||||  ||| |||||| ||||||||    
T  12654 tattgttctggaccggccaaaaggagctttggcccatttacttaggcctaatacaattcaaagcccaaacaccacgttttgcaacattacttgcgacaca 12555  T
Q  436 cccctcccatgcgagggggtgcacggaacgaaagagaccggttcaaacgaaacccaacgtctctttccacattcctgcaataaactcacaggcggttaca 535  Q
    ||| | |   |||||||| ||||| || ||||  ||||||||| ||| ||  | |||||||| |   ||| |||| ||||||| ||| |  |||||||||    
T  12554 cccattctccgcgaggggatgcacagagcgaacaagaccggtttaaatgagccacaacgtctgtg--cacgttcccgcaataatctctctagcggttaca 12457  T
Q  536 cttcccacaatttcgtaaccgtcagagtaaggtgtgccattacaacggctctgtagccctccacctctataaataggggactca 619  Q
    |||||||  |||| ||||||| |||||   ||||||||||||||||||||||| |||||| |||||||||| ||||||||||||    
T  12456 cttcccatgattttgtaaccgccagagcctggtgtgccattacaacggctctgcagcccttcacctctatatataggggactca 12373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0989 (Bit Score: 84; Significance: 1e-39; HSPs: 1)
Name: scaffold0989
Description:

Target: scaffold0989; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 399 - 642
Target Start/End: Original strand, 1452 - 1694
Alignment:
Q  399 cccaaacaccacgtttgacaaaattactcgcgacacacccctcccatgcgagggggtgcacggaacgaaagagaccggttcaaacgaaacccaacgtctc 498  Q
    ||||||||||||||||| | || ||||| |||||||| |||| ||   | | |||||||||||| |||||||||| |||||||||||| | |||| ||||    
T  1452 cccaaacaccacgtttggcgaagttacttgcgacacatcccttccccac-aaggggtgcacggagcgaaagagactggttcaaacgaaccacaacatctc 1550  T
Q  499 tttccacattcctgcaataaactcacaggcggttacacttcccacaatttcgtaaccgtcagagtaaggtgtgccattacaacggctctgtagccctcca 598  Q
    | | ||| |||| ||||||||||| | |||||||||||||| ||| ||||  |||| |  ||||  ||||||||||||||||| |||||  |||| ||||    
T  1551 tctacacgttcccgcaataaactctctggcggttacacttctcacgattttataactgctagagccaggtgtgccattacaacagctctacagccgtcca 1650  T
Q  599 cctctataaataggggactcaatgtagtccccaaggtataatct 642  Q
    ||||||||||||||| |||||| | ||||||||||||| |||||    
T  1651 cctctataaatagggcactcaaagcagtccccaaggtagaatct 1694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 82; Significance: 2e-38; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 339 - 619
Target Start/End: Original strand, 4065 - 4346
Alignment:
Q  339 tgttctggaccggccaaaaggatctttgatccatttatttaggctcaataccatctaaaacccaaacaccacgtttgacaaaattactcgcgacacaccc 438  Q
    ||||||||||||||||||||||| ||||   |||||| |||||   ||||| ||| |||  |||||||||||||||| |||| ||||| ||  || ||||    
T  4065 tgttctggaccggccaaaaggatatttggctcatttacttaggtcaaatacaatccaaagtccaaacaccacgtttggcaaacttacttgcagcataccc 4164  T
Q  439 ctcccatgcga-gggggtgcacggaacgaaagagaccggttcaaacgaaacccaacgtctctttccacattcctgcaataaactcacaggcggttacact 537  Q
    || |    ||| |||||| |||||| |||  | |||||||||||||||| | |||||||| | | ||| |||  ||||||||||| |  || |||||||     
T  4165 cttctccacgaagggggttcacggagcgagcgggaccggttcaaacgaaccacaacgtctatctgcacgttctcgcaataaactctctcgcagttacaca 4264  T
Q  538 tcccacaatttcgtaaccgtcagagtaaggtgtgccattacaacggctctgtagccctccacctctataaataggggactca 619  Q
    |||||| |||||||||||  |||||  |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||    
T  4265 tcccacgatttcgtaaccaccagagccaggtgtgccactacaacggctctgcagccctccacctctataaataggggactca 4346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 80; Significance: 3e-37; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 339 - 613
Target Start/End: Original strand, 2697 - 2974
Alignment:
Q  339 tgttctggaccggccaaaaggatctttgatccatttatttaggctcaataccatctaaaacccaaacaccacgtttgacaaaattactcgcgacacaccc 438  Q
    |||| ||||||| ||||||||| |||||  |||||||  |||||  ||||| ||  ||| |||||||||||  |||| ||| |||||| || ||||| ||    
T  2697 tgttttggaccgaccaaaaggagctttggcccatttacataggcctaatacaattcaaagcccaaacaccatctttggcaacattacttgctacacaacc 2796  T
Q  439 ctcccatgcgagggg---gtgcacggaacgaaagagaccggttcaaacgaaacccaacgtctctttccacattcctgcaataaactcacaggcggttaca 535  Q
    || |  |||||||||   ||||||||| ||||  ||||||||||||||||||| ||| |||||| | ||| |||| | ||||| ||| |  |||||||||    
T  2797 cttctctgcgaggggggggtgcacggagcgaacaagaccggttcaaacgaaacacaatgtctctctgcacgttccagtaataatctctctagcggttaca 2896  T
Q  536 cttcccacaatttcgtaaccgtcagagtaaggtgtgccattacaacggctctgtagccctccacctctataaataggg 613  Q
    |||||||| |||||||||||| |||||   |||||||||||||||| |||||| ||| ||||||||||||| ||||||    
T  2897 cttcccacgatttcgtaaccgccagagcctggtgtgccattacaacagctctgcagctctccacctctatatataggg 2974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 80; Significance: 3e-37; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 336 - 618
Target Start/End: Original strand, 37092 - 37374
Alignment:
Q  336 tattgttctggaccggccaaaaggatctttgatccatttatttaggctcaataccatctaaaacccaaacaccacgtttgacaaaattactcgcgacaca 435  Q
    |||||||||||||||| |||||||| |||||| ||||||| ||||||||||||| ||| ||| |  ||| |||||||||| ||   ||||| ||||||||    
T  37092 tattgttctggaccggtcaaaaggagctttgacccatttacttaggctcaatacaatccaaatctaaaataccacgtttggcagtgttacttgcgacaca 37191  T
Q  436 cccctcccatgcgag-ggggtgcacggaacgaaagagaccggttcaaacgaaacccaacgtctctttccacattcctgcaataaactcacaggcggttac 534  Q
    ||||| |   ||||  ||||||||| || | |   |||||| ||||||| || | |||||||||| | ||  |||||||||||| ||| | | |||||||    
T  37192 ccccttctccgcgacaggggtgcacagagcaagcaagaccgattcaaacaaaccgcaacgtctctctgcatgttcctgcaataatctctctg-cggttac 37290  T
Q  535 acttcccacaatttcgtaaccgtcagagtaaggtgtgccattacaacggctctgtagccctccacctctataaataggggactc 618  Q
    ||||||||| ||||| |||||| |||||   || ||||||| |||||||||||| ||||||||||||||||| |||||||||||    
T  37291 acttcccacgatttcataaccgccagagcctggcgtgccatcacaacggctctgcagccctccacctctatatataggggactc 37374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0483 (Bit Score: 63; Significance: 5e-27; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 338 - 556
Target Start/End: Complemental strand, 9462 - 9247
Alignment:
Q  338 ttgttctggaccggccaaaaggatctttgatccatttatttaggctcaataccatctaaaacccaaacaccacgtttgacaaaattactcgcgacacacc 437  Q
    ||||| |||||||||| | ||||  ||||  ||||||| || ||  |||||| ||  ||| ||||||||||||||||| |||||||||| ||||||||||    
T  9462 ttgttatggaccggcctagaggagttttggcccatttacttgggtccaatactattcaaagcccaaacaccacgtttggcaaaattacttgcgacacacc 9363  T
Q  438 cctcccatgcgagggggtgcacggaacgaaagagaccggttcaaacgaaacccaacgtctctttccacattcctgcaataaactcacaggcgg-ttacac 536  Q
    |||  |  |||||  |||||||||| |    ||||| |||||||||||| | |||||||||| | ||| |||||||||||||||| |  |||| ||||||    
T  9362 cctttcccgcgagcaggtgcacggagc----gagactggttcaaacgaaccacaacgtctctctgcacgttcctgcaataaactctctagcggtttacac 9267  T
Q  537 ttcccacaatttcgtaaccg 556  Q
    ||||||||||||||||||||    
T  9266 ttcccacaatttcgtaaccg 9247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 565 - 642
Target Start/End: Complemental strand, 19254 - 19177
Alignment:
Q  565 aggtgtgccattacaacggctctgtagccctccacctctataaataggggactcaatgtagtccccaaggtataatct 642  Q
    ||||||||| |||||| ||||||| |||||||||||||||||||||||||||||| || ||||||||||||| |||||    
T  19254 aggtgtgccgttacaatggctctgcagccctccacctctataaataggggactcactgcagtccccaaggtagaatct 19177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 50; Significance: 3e-19; HSPs: 2)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 529 - 618
Target Start/End: Original strand, 36839 - 36928
Alignment:
Q  529 ggttacacttcccacaatttcgtaaccgtcagagtaaggtgtgccattacaacggctctgtagccctccacctctataaataggggactc 618  Q
    |||||||||||||||||||||||||||||| ||   | |||||||||||||||||||||  ||||  ||||||||||| |||||||||||    
T  36839 ggttacacttcccacaatttcgtaaccgtcggacacacgtgtgccattacaacggctctacagccacccacctctatatataggggactc 36928  T

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Target: scaffold0063; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 527 - 618
Target Start/End: Original strand, 49284 - 49375
Alignment:
Q  527 gcggttacacttcccacaatttcgtaaccgtcagagtaaggtgtgccattacaacggctctgtagccctccacctctataaataggggactc 618  Q
    ||||||||||||||||| ||||||||||| |  ||   |  ||||||||||||||||||||| | ||  ||||||||||| |||||||||||    
T  49284 gcggttacacttcccacgatttcgtaaccattggacacacatgtgccattacaacggctctgcatccacccacctctatatataggggactc 49375  T

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Target: scaffold0011 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 527 - 618
Target Start/End: Original strand, 20342 - 20433
Alignment:
Q  527 gcggttacacttcccacaatttcgtaaccgtcagagtaaggtgtgccattacaacggctctgtagccctccacctctataaataggggactc 618  Q
    |||||||||||||||||||||| |||||||   ||   | |||| ||||||||||||||||| ||||||||||||||| |||||||||||||    
T  20342 gcggttacacttcccacaattttgtaaccgcttgacccaagtgtaccattacaacggctctgcagccctccacctctaaaaataggggactc 20433  T

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Target: scaffold1272 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold1272
Description:

Target: scaffold1272; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 338 - 440
Target Start/End: Complemental strand, 2075 - 1973
Alignment:
Q  338 ttgttctggaccggccaaaaggatctttgatccatttatttaggctcaataccatctaaaacccaaacaccacgtttgacaaaattactcgcgacacacc 437  Q
    |||||||||||||||||||||||  ||||  ||||||| || ||  |||||| ||  ||| ||||||||||||||||| |||||||||| ||||||||||    
T  2075 ttgttctggaccggccaaaaggagttttggcccatttacttgggtccaatactattcaaagcccaaacaccacgtttggcaaaattacttgcgacacacc 1976  T
Q  438 cct 440  Q
    |||    
T  1975 cct 1973  T

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Target: scaffold0025 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 531 - 619
Target Start/End: Original strand, 86424 - 86512
Alignment:
Q  531 ttacacttcccacaatttcgtaaccgtcagagtaaggtgtgccattacaacggctctgtagccctccacctctataaataggggactca 619  Q
    |||||||| |||| ||||||||| || |||||    |||||||||||||||| || || | ||||||||||||||| ||||||||||||    
T  86424 ttacactttccacgatttcgtaatcgccagagcctagtgtgccattacaacgactttgcaaccctccacctctatatataggggactca 86512  T

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Target: scaffold0233 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0233
Description:

Target: scaffold0233; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 520 - 556
Target Start/End: Original strand, 16044 - 16080
Alignment:
Q  520 ctcacaggcggttacacttcccacaatttcgtaaccg 556  Q
    ||||| |||||||||||||||||| ||||||||||||    
T  16044 ctcaccggcggttacacttcccacgatttcgtaaccg 16080  T

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