View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5169_high_25 (Length: 238)
Name: NF5169_high_25
Description: NF5169
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5169_high_25 |
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Alignment Details
Target: chr1 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 34666863 - 34667085
Alignment:
| Q |
1 |
tataggcagatgacataataaagagcaaaagtgatgttcccaaatgtttataggtggtgagtgggaccaatggtagggaagtttatgctgtaaattgtgt |
100 |
Q |
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| T |
34666863 |
tataggcagatgacataataaagagcaaaagcgatgttcccaaatgtttataggtggtgagtgggaccaatggtagggaagttaatgctgtaaattgtgt |
34666962 |
T |
|
| Q |
101 |
tggaaatcggaagctatagggaatgaaatagtactctagaagtgaatgtttgtttttctgtccctaaacaaagacctatacacagtgtacttataagtat |
200 |
Q |
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||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
34666963 |
tggaaataggaagctatagggaatgaaatagtactctagaagtgaatgtttgtttttctgtccctaatcaaagacctatacacagtgtacttataagtat |
34667062 |
T |
|
| Q |
201 |
taaataaatgaatcactaatgtg |
223 |
Q |
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||||||||||||||||||||||| |
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| T |
34667063 |
taaataaatgaatcactaatgtg |
34667085 |
T |
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