View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5171-Insertion-6 (Length: 235)

Name: NF5171-Insertion-6
Description: NF5171
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5171-Insertion-6
NF5171-Insertion-6
[»] chr4 (73 HSPs)
chr4 (69-235)||(46193782-46193948)
chr4 (66-235)||(25937669-25937838)
chr4 (64-235)||(33109681-33109852)
chr4 (69-234)||(23494445-23494610)
chr4 (66-235)||(25447613-25447782)
chr4 (62-235)||(15523611-15523784)
chr4 (67-235)||(11153524-11153692)
chr4 (69-235)||(38962196-38962362)
chr4 (66-235)||(12234328-12234497)
chr4 (65-235)||(22170314-22170483)
chr4 (66-235)||(51020796-51020965)
chr4 (69-232)||(4219559-4219722)
chr4 (70-235)||(22434555-22434718)
chr4 (67-229)||(46193405-46193568)
chr4 (66-235)||(48526195-48526363)
chr4 (66-226)||(15523234-15523395)
chr4 (67-227)||(22434179-22434340)
chr4 (67-227)||(25447247-25447408)
chr4 (70-234)||(54995446-54995609)
chr4 (66-181)||(23494874-23494989)
chr4 (65-235)||(2118673-2118842)
chr4 (58-227)||(45082808-45082978)
chr4 (61-235)||(45082426-45082598)
chr4 (70-227)||(54995072-54995230)
chr4 (65-181)||(25938102-25938218)
chr4 (65-227)||(11153144-11153307)
chr4 (66-181)||(33109895-33110010)
chr4 (58-227)||(12234713-12234883)
chr4 (66-227)||(20470895-20471057)
chr4 (65-227)||(48526565-48526728)
chr4 (70-227)||(4219943-4220101)
chr4 (66-227)||(51021180-51021341)
chr4 (66-207)||(48293593-48293734)
chr4 (69-181)||(2118295-2118407)
chr4 (65-180)||(18751597-18751712)
chr4 (68-207)||(20958266-20958403)
chr4 (69-182)||(18763950-18764063)
chr4 (68-207)||(44892553-44892692)
chr4 (70-207)||(48713751-48713888)
chr4 (135-235)||(12503813-12503913)
chr4 (85-207)||(43243686-43243807)
chr4 (62-193)||(10258306-10258437)
chr4 (65-203)||(16690934-16691072)
chr4 (67-207)||(48294947-48295088)
chr4 (66-203)||(48708294-48708431)
chr4 (67-178)||(35363034-35363146)
chr4 (85-205)||(43281198-43281317)
chr4 (58-207)||(44890508-44890657)
chr4 (84-227)||(12503453-12503597)
chr4 (74-205)||(20957196-20957327)
chr4 (65-137)||(16318251-16318323)
chr4 (67-203)||(16691481-16691616)
chr4 (125-207)||(43242328-43242410)
chr4 (64-235)||(17503971-17504141)
chr4 (67-164)||(55189528-55189625)
chr4 (64-120)||(55677451-55677507)
chr4 (176-235)||(18751979-18752038)
chr4 (128-207)||(44220782-44220861)
chr4 (67-207)||(30597926-30598065)
chr4 (69-120)||(44219377-44219428)
chr4 (66-120)||(46737148-46737202)
chr4 (59-120)||(21034730-21034791)
chr4 (59-120)||(34789876-34789937)
chr4 (66-118)||(12593518-12593570)
chr4 (69-232)||(24336144-24336307)
chr4 (69-120)||(54440573-54440624)
chr4 (66-120)||(19528868-19528922)
chr4 (66-120)||(33689828-33689882)
chr4 (66-120)||(41608908-41608962)
chr4 (66-120)||(45838546-45838600)
chr4 (203-235)||(17504337-17504369)
chr4 (66-118)||(34807115-34807167)
chr4 (203-235)||(35193443-35193475)
[»] chr5 (49 HSPs)
chr5 (66-235)||(2865132-2865301)
chr5 (66-235)||(18183346-18183515)
chr5 (67-235)||(8647438-8647606)
chr5 (64-234)||(29455120-29455290)
chr5 (62-235)||(19359131-19359304)
chr5 (67-235)||(5819306-5819474)
chr5 (66-229)||(24362219-24362382)
chr5 (66-235)||(14215620-14215789)
chr5 (66-235)||(8460929-8461098)
chr5 (66-235)||(15708970-15709138)
chr5 (70-234)||(15372251-15372415)
chr5 (66-235)||(164568-164737)
chr5 (65-235)||(16018587-16018755)
chr5 (66-227)||(19359520-19359682)
chr5 (66-232)||(14463901-14464066)
chr5 (89-234)||(25000112-25000257)
chr5 (70-227)||(5818932-5819090)
chr5 (66-227)||(8647822-8647984)
chr5 (70-227)||(18182973-18183131)
chr5 (69-227)||(2864756-2864915)
chr5 (64-227)||(8461315-8461479)
chr5 (73-227)||(24361843-24361997)
chr5 (65-229)||(25000471-25000636)
chr5 (64-227)||(29454737-29454901)
chr5 (73-227)||(24325218-24325372)
chr5 (67-207)||(7349422-7349562)
chr5 (69-227)||(14215243-14215402)
chr5 (69-232)||(24331940-24332107)
chr5 (66-227)||(24331558-24331722)
chr5 (67-226)||(164191-164350)
chr5 (70-229)||(16018969-16019129)
chr5 (67-208)||(4623148-4623287)
chr5 (68-187)||(4222147-4222266)
chr5 (69-180)||(15371873-15371983)
chr5 (61-193)||(7348553-7348685)
chr5 (67-227)||(15709353-15709513)
chr5 (67-205)||(4219663-4219800)
chr5 (80-206)||(4624631-4624757)
chr5 (73-205)||(6019177-6019309)
chr5 (8-66)||(5501689-5501747)
chr5 (68-206)||(6018315-6018452)
chr5 (118-207)||(13814133-13814226)
chr5 (65-229)||(41834443-41834607)
chr5 (68-227)||(10721787-10721945)
chr5 (197-227)||(14340793-14340823)
chr5 (149-227)||(14462686-14462769)
chr5 (66-118)||(15029804-15029856)
chr5 (66-142)||(22651782-22651858)
chr5 (68-120)||(32697719-32697771)
[»] chr1 (47 HSPs)
chr1 (65-235)||(50970655-50970825)
chr1 (65-235)||(5540195-5540365)
chr1 (64-235)||(15646572-15646743)
chr1 (66-232)||(18984118-18984284)
chr1 (67-235)||(29306953-29307121)
chr1 (63-235)||(29869616-29869788)
chr1 (69-235)||(33144296-33144462)
chr1 (61-235)||(15173090-15173264)
chr1 (64-235)||(5962955-5963126)
chr1 (67-235)||(21856420-21856588)
chr1 (67-235)||(8678919-8679086)
chr1 (66-235)||(9018972-9019141)
chr1 (67-232)||(17433216-17433381)
chr1 (67-235)||(29307318-29307487)
chr1 (66-234)||(26859438-26859605)
chr1 (69-230)||(39154021-39154182)
chr1 (64-181)||(18984550-18984667)
chr1 (68-227)||(5539817-5539977)
chr1 (69-229)||(17433597-17433758)
chr1 (66-225)||(50970277-50970437)
chr1 (64-207)||(52268287-52268430)
chr1 (65-227)||(33143913-33144078)
chr1 (68-181)||(8678542-8678655)
chr1 (67-227)||(29870003-29870164)
chr1 (68-226)||(4636356-4636515)
chr1 (69-227)||(21856044-21856203)
chr1 (65-227)||(39154404-39154567)
chr1 (66-227)||(15173478-15173639)
chr1 (66-231)||(9019343-9019509)
chr1 (66-227)||(15646191-15646353)
chr1 (67-181)||(26859059-26859173)
chr1 (68-227)||(5962579-5962739)
chr1 (127-235)||(4636033-4636140)
chr1 (66-153)||(2733416-2733503)
chr1 (69-181)||(52269179-52269291)
chr1 (67-227)||(17112282-17112442)
chr1 (69-142)||(47826966-47827039)
chr1 (75-164)||(47827036-47827125)
chr1 (67-148)||(50419725-50419806)
chr1 (65-120)||(29438928-29438983)
chr1 (64-128)||(39843509-39843573)
chr1 (66-229)||(44802555-44802718)
chr1 (66-128)||(52233737-52233799)
chr1 (66-208)||(52235073-52235215)
chr1 (69-118)||(50304441-50304490)
chr1 (203-235)||(17088518-17088550)
chr1 (70-118)||(17641864-17641912)
[»] chr7 (38 HSPs)
chr7 (65-235)||(37786765-37786935)
chr7 (70-235)||(19830423-19830588)
chr7 (67-235)||(19590525-19590693)
chr7 (65-235)||(29100228-29100398)
chr7 (65-235)||(38858641-38858811)
chr7 (66-235)||(35289278-35289447)
chr7 (67-235)||(32004991-32005159)
chr7 (66-234)||(34534169-34534337)
chr7 (66-235)||(2659217-2659386)
chr7 (65-231)||(4641438-4641604)
chr7 (66-227)||(19590909-19591071)
chr7 (73-235)||(23953106-23953268)
chr7 (66-227)||(38859025-38859187)
chr7 (70-235)||(4478077-4478242)
chr7 (66-226)||(32004613-32004774)
chr7 (66-205)||(28583438-28583577)
chr7 (66-227)||(2658838-2659000)
chr7 (66-225)||(37787153-37787313)
chr7 (66-207)||(38160950-38161091)
chr7 (80-227)||(29099863-29100011)
chr7 (66-227)||(34533790-34533952)
chr7 (67-181)||(35288903-35289017)
chr7 (61-181)||(23952724-23952845)
chr7 (65-227)||(19830804-19830966)
chr7 (68-207)||(28584327-28584466)
chr7 (70-227)||(4641828-4641983)
chr7 (65-131)||(39137014-39137081)
chr7 (64-122)||(34595263-34595321)
chr7 (67-120)||(26048439-26048492)
chr7 (67-120)||(27245203-27245256)
chr7 (65-142)||(49064032-49064109)
chr7 (58-117)||(2758194-2758253)
chr7 (70-120)||(787279-787329)
chr7 (61-115)||(5746138-5746192)
chr7 (201-235)||(32427398-32427432)
chr7 (66-120)||(48247586-48247640)
chr7 (70-118)||(26026320-26026368)
chr7 (68-120)||(39388761-39388813)
[»] scaffold0295 (2 HSPs)
scaffold0295 (66-235)||(4792-4961)
scaffold0295 (69-181)||(5222-5334)
[»] chr6 (37 HSPs)
chr6 (66-235)||(18257136-18257305)
chr6 (66-235)||(20741099-20741268)
chr6 (67-235)||(10900307-10900475)
chr6 (67-235)||(11276959-11277127)
chr6 (65-235)||(15828018-15828188)
chr6 (68-235)||(31470693-31470860)
chr6 (66-227)||(2319671-2319832)
chr6 (66-235)||(12935534-12935703)
chr6 (66-235)||(28472636-28472804)
chr6 (66-235)||(29859825-29859993)
chr6 (67-235)||(1149808-1149977)
chr6 (66-235)||(11444986-11445155)
chr6 (70-235)||(10899942-10900108)
chr6 (66-227)||(12935156-12935318)
chr6 (68-226)||(18505305-18505463)
chr6 (65-234)||(23073997-23074155)
chr6 (66-227)||(11445371-11445533)
chr6 (66-227)||(22219737-22219899)
chr6 (66-227)||(23075512-23075674)
chr6 (70-231)||(2322600-2322760)
chr6 (67-230)||(4811372-4811535)
chr6 (70-227)||(18504922-18505080)
chr6 (65-227)||(20741485-20741651)
chr6 (67-227)||(18257521-18257682)
chr6 (64-227)||(31470312-31470476)
chr6 (69-207)||(29033436-29033575)
chr6 (65-235)||(11276588-11276759)
chr6 (63-203)||(3835135-3835275)
chr6 (69-207)||(29035042-29035180)
chr6 (66-155)||(1149464-1149553)
chr6 (66-207)||(18296144-18296284)
chr6 (68-181)||(15827639-15827754)
chr6 (67-176)||(4811692-4811801)
chr6 (67-123)||(22534214-22534270)
chr6 (65-114)||(31574224-31574273)
chr6 (66-114)||(5120968-5121016)
chr6 (68-120)||(30250722-30250774)
[»] chr3 (67 HSPs)
chr3 (70-235)||(5136983-5137148)
chr3 (67-235)||(39555954-39556122)
chr3 (66-235)||(24300933-24301102)
chr3 (66-235)||(31779029-31779198)
chr3 (65-235)||(23644460-23644630)
chr3 (66-235)||(20840559-20840728)
chr3 (70-235)||(41046703-41046868)
chr3 (65-235)||(37726927-37727097)
chr3 (63-235)||(27393954-27394126)
chr3 (67-235)||(43973441-43973609)
chr3 (66-222)||(48452988-48453144)
chr3 (66-235)||(30104481-30104649)
chr3 (67-232)||(32535339-32535508)
chr3 (69-235)||(25853604-25853770)
chr3 (66-235)||(26837733-26837901)
chr3 (71-235)||(22425190-22425354)
chr3 (58-232)||(17464871-17465046)
chr3 (66-227)||(43973824-43973986)
chr3 (67-227)||(37727314-37727475)
chr3 (64-227)||(27393658-27393822)
chr3 (61-227)||(17464485-17464652)
chr3 (65-227)||(20840945-20841108)
chr3 (65-227)||(39555576-39555739)
chr3 (70-207)||(25612382-25612519)
chr3 (67-227)||(25853234-25853395)
chr3 (70-235)||(26274944-26275108)
chr3 (65-227)||(31778651-31778814)
chr3 (66-227)||(4275748-4275910)
chr3 (66-229)||(29801798-29801962)
chr3 (65-181)||(32534957-32535073)
chr3 (67-227)||(23644849-23645010)
chr3 (63-227)||(30098147-30098312)
chr3 (67-206)||(23228414-23228552)
chr3 (66-227)||(5137365-5137527)
chr3 (70-227)||(26837363-26837521)
chr3 (66-227)||(22424813-22424975)
chr3 (62-188)||(29801351-29801477)
chr3 (67-207)||(50116814-50116954)
chr3 (68-208)||(32697105-32697244)
chr3 (65-227)||(26274565-26274728)
chr3 (66-207)||(51474738-51474880)
chr3 (66-207)||(37220556-37220697)
chr3 (68-181)||(51473429-51473542)
chr3 (65-227)||(24300555-24300717)
chr3 (66-205)||(45965937-45966076)
chr3 (65-227)||(41047083-41047244)
chr3 (69-205)||(25420548-25420684)
chr3 (66-153)||(37222030-37222117)
chr3 (68-207)||(25419145-25419284)
chr3 (86-195)||(18010162-18010271)
chr3 (64-207)||(23227259-23227396)
chr3 (70-194)||(32695706-32695830)
chr3 (66-235)||(27200070-27200238)
chr3 (66-235)||(49407795-49407963)
chr3 (183-234)||(29801532-29801583)
chr3 (65-120)||(51827955-51828010)
chr3 (66-120)||(52375824-52375878)
chr3 (61-118)||(49720856-49720913)
chr3 (70-142)||(22370599-22370671)
chr3 (65-120)||(330329-330384)
chr3 (65-116)||(14654686-14654737)
chr3 (63-98)||(25611494-25611529)
chr3 (65-120)||(41998721-41998776)
chr3 (66-120)||(49720370-49720424)
chr3 (197-235)||(55192247-55192285)
chr3 (67-120)||(40275093-40275146)
chr3 (65-118)||(46013420-46013473)
[»] chr2 (53 HSPs)
chr2 (70-235)||(11090524-11090689)
chr2 (66-235)||(1978107-1978276)
chr2 (61-232)||(239347-239517)
chr2 (64-235)||(40027137-40027308)
chr2 (66-232)||(22374319-22374485)
chr2 (70-235)||(40815722-40815887)
chr2 (62-235)||(43058328-43058501)
chr2 (66-235)||(18451208-18451377)
chr2 (64-232)||(26538094-26538262)
chr2 (66-235)||(26538455-26538625)
chr2 (70-235)||(8425737-8425902)
chr2 (70-235)||(14432145-14432310)
chr2 (67-235)||(28616613-28616782)
chr2 (65-223)||(7446340-7446497)
chr2 (73-235)||(3025472-3025633)
chr2 (65-207)||(20444747-20444889)
chr2 (65-227)||(18450828-18450991)
chr2 (66-227)||(22374709-22374871)
chr2 (65-227)||(40027524-40027687)
chr2 (66-227)||(7446730-7446892)
chr2 (68-207)||(35781068-35781207)
chr2 (69-227)||(40815347-40815506)
chr2 (68-227)||(239736-239896)
chr2 (67-207)||(35779708-35779848)
chr2 (66-181)||(1978540-1978655)
chr2 (66-207)||(20440437-20440577)
chr2 (66-181)||(11090951-11091066)
chr2 (65-227)||(28616998-28617161)
chr2 (66-227)||(43058717-43058878)
chr2 (66-181)||(28847126-28847241)
chr2 (67-226)||(3025848-3026006)
chr2 (69-207)||(8972239-8972377)
chr2 (70-226)||(8425358-8425514)
chr2 (69-207)||(15551501-15551639)
chr2 (69-227)||(14432525-14432684)
chr2 (69-208)||(15552458-15552596)
chr2 (61-235)||(28143408-28143581)
chr2 (65-209)||(3824112-3824256)
chr2 (70-141)||(3822924-3822995)
chr2 (67-118)||(4355755-4355806)
chr2 (65-120)||(42192736-42192791)
chr2 (66-120)||(25336093-25336147)
chr2 (66-120)||(38007949-38008003)
chr2 (66-120)||(43216202-43216256)
chr2 (67-120)||(6949937-6949990)
chr2 (65-225)||(31797166-31797325)
chr2 (64-120)||(32418156-32418212)
chr2 (66-120)||(20128230-20128284)
chr2 (67-120)||(42192240-42192293)
chr2 (65-118)||(44220140-44220193)
chr2 (66-142)||(62956-63032)
chr2 (64-128)||(9747518-9747582)
chr2 (68-120)||(16953427-16953479)
[»] chr8 (38 HSPs)
chr8 (66-234)||(19176668-19176836)
chr8 (66-235)||(41681133-41681301)
chr8 (66-234)||(31133219-31133387)
chr8 (66-235)||(12571862-12572032)
chr8 (65-235)||(9930034-9930204)
chr8 (66-235)||(11656454-11656624)
chr8 (65-235)||(33328156-33328326)
chr8 (66-235)||(44831622-44831791)
chr8 (71-235)||(13224645-13224808)
chr8 (58-227)||(44831238-44831408)
chr8 (67-234)||(9178014-9178180)
chr8 (65-227)||(13225023-13225186)
chr8 (66-227)||(19176289-19176451)
chr8 (65-227)||(11656841-11657004)
chr8 (70-227)||(9928912-9929070)
chr8 (67-181)||(41681565-41681679)
chr8 (68-179)||(31133653-31133764)
chr8 (66-181)||(34540979-34541094)
chr8 (70-235)||(4630169-4630328)
chr8 (66-227)||(33742921-33743082)
chr8 (70-227)||(12572235-12572393)
chr8 (113-233)||(33743298-33743418)
chr8 (69-227)||(33328524-33328683)
chr8 (66-175)||(11336959-11337068)
chr8 (66-179)||(4629796-4629909)
chr8 (70-205)||(10918129-10918264)
chr8 (65-207)||(8073957-8074098)
chr8 (146-207)||(43958264-43958325)
chr8 (64-107)||(10919691-10919734)
chr8 (66-100)||(9177666-9177700)
chr8 (66-120)||(15255852-15255906)
chr8 (68-120)||(28254919-28254971)
chr8 (66-142)||(35427283-35427359)
chr8 (64-118)||(599529-599583)
chr8 (66-120)||(6115604-6115658)
chr8 (69-115)||(43958211-43958257)
chr8 (67-120)||(9796726-9796779)
chr8 (65-117)||(28877385-28877437)
[»] scaffold0951 (2 HSPs)
scaffold0951 (66-235)||(1666-1835)
scaffold0951 (66-227)||(2051-2213)
[»] scaffold0273 (2 HSPs)
scaffold0273 (66-235)||(4584-4753)
scaffold0273 (106-227)||(4242-4364)
[»] scaffold0007 (4 HSPs)
scaffold0007 (64-235)||(64299-64470)
scaffold0007 (65-181)||(64736-64852)
scaffold0007 (64-235)||(205746-205916)
scaffold0007 (64-164)||(210786-210886)
[»] scaffold0019 (1 HSPs)
scaffold0019 (66-235)||(134050-134219)
[»] scaffold1223 (2 HSPs)
scaffold1223 (69-235)||(755-920)
scaffold1223 (67-235)||(1117-1286)
[»] scaffold0027 (2 HSPs)
scaffold0027 (66-235)||(42536-42704)
scaffold0027 (62-235)||(42164-42338)
[»] scaffold0432 (2 HSPs)
scaffold0432 (70-235)||(10250-10414)
scaffold0432 (70-174)||(9935-10039)
[»] scaffold0417 (2 HSPs)
scaffold0417 (86-235)||(10640-10789)
scaffold0417 (67-181)||(11054-11168)
[»] scaffold0176 (2 HSPs)
scaffold0176 (65-234)||(18833-19001)
scaffold0176 (67-164)||(19069-19166)
[»] scaffold0113 (1 HSPs)
scaffold0113 (65-193)||(28662-28790)
[»] scaffold1585 (1 HSPs)
scaffold1585 (68-207)||(568-707)
[»] scaffold0157 (2 HSPs)
scaffold0157 (135-235)||(16564-16664)
scaffold0157 (84-227)||(16880-17024)
[»] scaffold0057 (2 HSPs)
scaffold0057 (70-207)||(61863-62000)
scaffold0057 (66-141)||(61027-61102)
[»] scaffold1696 (1 HSPs)
scaffold1696 (71-207)||(454-588)
[»] scaffold0076 (1 HSPs)
scaffold0076 (70-170)||(8451-8551)
[»] scaffold0168 (1 HSPs)
scaffold0168 (116-207)||(7693-7784)
[»] scaffold1339 (1 HSPs)
scaffold1339 (60-92)||(30-62)
[»] scaffold0830 (1 HSPs)
scaffold0830 (60-92)||(5352-5384)


Alignment Details
Target: chr4 (Bit Score: 159; Significance: 8e-85; HSPs: 73)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 159; E-Value: 8e-85
Query Start/End: Original strand, 69 - 235
Target Start/End: Complemental strand, 46193948 - 46193782
Alignment:
Q  69 cttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattg 168  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46193948 cttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattg 46193849  T
Q  169 catttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccc 235  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  46193848 catttttcgtcctaccccccattttattctccaaaaacgtagagaattgacagttttagacctaccc 46193782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 66 - 235
Target Start/End: Original strand, 25937669 - 25937838
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 165  Q
    ||||||||||||| |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||     
T  25937669 aggcttaattacatttttggtcctcgtgttttagcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 25937768  T
Q  166 ttgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccc 235  Q
    |||||||||| |||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  25937769 ttgcattttttgtcctgtcccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 25937838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 64 - 235
Target Start/End: Original strand, 33109681 - 33109852
Alignment:
Q  64 taaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 163  Q
    |||| |||||||||| ||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  33109681 taagacttaattacatttttggtcctcgtgttttggcatactcacgaaactggtcctgctcttttaaaacagaacaaaacggtccttcaattatcatttt 33109780  T
Q  164 tattgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccc 235  Q
    | |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  33109781 tgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 33109852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 69 - 234
Target Start/End: Original strand, 23494445 - 23494610
Alignment:
Q  69 cttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattg 168  Q
    |||||||||| ||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  23494445 cttaattacatttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaagcggtccttcaattatcatttttattg 23494544  T
Q  169 catttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctacc 234  Q
    ||||||||||||| ||||||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  23494545 catttttcgtcctaccccccattttattctccaaacacgcagagaaatgacagttttagacctacc 23494610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 66 - 235
Target Start/End: Complemental strand, 25447782 - 25447613
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 165  Q
    |||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||     
T  25447782 aggcttaattacacttttggtcttcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtctttcaattatcatttttg 25447683  T
Q  166 ttgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccc 235  Q
    |||||||||||||||| ||| ||||||||||||||||||||| |||||||| ||||||||||||||||||    
T  25447682 ttgcatttttcgtcctaccctccattttattctccaaaaacgcagagaaattacagttttagacctaccc 25447613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 62 - 235
Target Start/End: Complemental strand, 15523784 - 15523611
Alignment:
Q  62 tataaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 161  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||||||| ||||||||||||||||||||| ||||||| |||||||||| |||||||    
T  15523784 tataaggcttaattacacttttggtcatcgtgttttgggctactcacgaaactggtcctgcccttttaaaacaaaacaaaatggtccttcaagtatcatt 15523685  T
Q  162 tttattgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccc 235  Q
    ||| |||||||||||||||| ||||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  15523684 tttgttgcatttttcgtcctaccccccattttattctccaaaaacgcaaagaaatgacagttttagacctaccc 15523611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 67 - 235
Target Start/End: Complemental strand, 11153692 - 11153524
Alignment:
Q  67 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttat 166  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| ||||||||||||||||||| |    
T  11153692 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaaacagaacaaaacgttccttcaattatcatttttgt 11153593  T
Q  167 tgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccc 235  Q
    ||||||||||||||| ||| ||||||||||||||||||||| |||||||| |||||||||||| |||||    
T  11153592 tgcatttttcgtcctaccctccattttattctccaaaaacgcagagaaataacagttttagacttaccc 11153524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 69 - 235
Target Start/End: Complemental strand, 38962362 - 38962196
Alignment:
Q  69 cttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattg 168  Q
    |||||||||| |||||||||||||||||||| ||| |||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||| |||    
T  38962362 cttaattacatttttggtcctcgtgttttggtctattcacgaaactggtccggcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 38962263  T
Q  169 catttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccc 235  Q
    ||||||||||||| |||||||||||||||| |||||||| |||||||||||||||||||||||||||    
T  38962262 catttttcgtcctaccccccattttattcttcaaaaacgcagagaaatgacagttttagacctaccc 38962196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 66 - 235
Target Start/End: Original strand, 12234328 - 12234497
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 165  Q
    ||||||||||||||||||||||||| ||||||||| || |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||     
T  12234328 aggcttaattacacttttggtcctcttgttttggcttattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 12234427  T
Q  166 ttgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccc 235  Q
    |||||||||||||||| ||||||||||||||||||||||||| |||||||| ||||||||| ||||||||    
T  12234428 ttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaataacagttttaaacctaccc 12234497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 65 - 235
Target Start/End: Complemental strand, 22170483 - 22170314
Alignment:
Q  65 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 164  Q
    |||||||||||||||||||||||||||||||||| |||||| ||||||||| ||||||| |||||||||| |||||||||||| ||||||||||||||||    
T  22170483 aaggcttaattacacttttggtcctcgtgttttgacctactgacgaaattg-tcctgcctttttaaaacaaaacaaaacggtcattcaattatcattttt 22170385  T
Q  165 attgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccc 235  Q
     |||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  22170384 gttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacgtaccc 22170314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 66 - 235
Target Start/End: Original strand, 51020796 - 51020965
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 165  Q
    ||||||||||||||||||| ||||| |||||||||  | |||| ||| ||||||||||||||||||||||||||||||| |||||||||||||||||||     
T  51020796 aggcttaattacacttttgatcctcatgttttggctaattcactaaactggtcctgcccttttaaaacagaacaaaacgatccttcaattatcatttttg 51020895  T
Q  166 ttgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccc 235  Q
    |||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  51020896 ttgcatttttcgtcctaccccccattttattcttcaaaaacgtagagaaatgacagttttagacctaccc 51020965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 69 - 232
Target Start/End: Original strand, 4219559 - 4219722
Alignment:
Q  69 cttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattg 168  Q
    |||||||||| ||||||||||||||||||||||||||||||||| |||||||||| |||||||| | |||||||| |||||||||||||||||||| |||    
T  4219559 cttaattacatttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaaataaaacaaaacagtccttcaattatcatttttgttg 4219658  T
Q  169 catttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagaccta 232  Q
    ||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  4219659 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttaaaccta 4219722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 70 - 235
Target Start/End: Complemental strand, 22434718 - 22434555
Alignment:
Q  70 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattgc 169  Q
    ||||||||| ||||||||||||||||||||||||||||||||| |||||||||| |||| |||||||||||||||||| |||||||||||||||| ||||    
T  22434718 ttaattacatttttggtcctcgtgttttggcctactcacgaaactggtcctgccatttt-aaacagaacaaaacggtcattcaattatcatttttgttgc 22434620  T
Q  170 atttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccc 235  Q
    ||||||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  22434619 atttttcgtcct-acccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 22434555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 67 - 229
Target Start/End: Original strand, 46193405 - 46193568
Alignment:
Q  67 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttat 166  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |    
T  46193405 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaaaggtccttcaattatcatttttgt 46193504  T
Q  167 tgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttagac 229  Q
    ||||||||||||||| || || ||||| |  ||||| ||||| |||||||||||||||||||||    
T  46193505 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttagac 46193568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 66 - 235
Target Start/End: Original strand, 48526195 - 48526363
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 165  Q
    ||||||||||||||||||||| ||||||||||| |||||||| |||| |||  ||||||||||||||||||||||||||||||||||||||||||||||     
T  48526195 aggcttaattacacttttggttctcgtgttttgacctactcatgaaactggctctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 48526294  T
Q  166 ttgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccc 235  Q
    ||||||||||||||||  |||||||||||||||||||||| | |||||||||||||||||||| ||||||    
T  48526295 ttgcatttttcgtcct-acccccattttattctccaaaaatgcagagaaatgacagttttagatctaccc 48526363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 66 - 226
Target Start/End: Original strand, 15523234 - 15523395
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||     
T  15523234 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattattatttttt 15523333  T
Q  166 ttgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagtttta 226  Q
    |||||||||||||||| || || ||||| |  ||| | ||||| ||||||||||||||||||    
T  15523334 ttgcatttttcgtcctacctcctattttcaaactctagaaacgcagagaaatgacagtttta 15523395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 67 - 227
Target Start/End: Original strand, 22434179 - 22434340
Alignment:
Q  67 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttat 166  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  22434179 ggcttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 22434278  T
Q  167 tgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 227  Q
    || |||||||||||| || || ||||| |  ||||| ||||| |||||||||||||||||||    
T  22434279 tgtatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 22434340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 67 - 227
Target Start/End: Original strand, 25447247 - 25447408
Alignment:
Q  67 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttat 166  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  25447247 ggcttaattacacttttggtcctcgtgttttggcctactcatgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 25447346  T
Q  167 tgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 227  Q
    ||||||||||||||| || || ||||| |  ||||| ||||| |||||||||||| ||||||    
T  25447347 tgcatttttcgtcctacctcctattttcaaactccataaacgcagagaaatgacaattttag 25447408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 70 - 234
Target Start/End: Complemental strand, 54995609 - 54995446
Alignment:
Q  70 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattgc 169  Q
    ||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||| |||||||||||||||||||| ||||| |||| ||||    
T  54995609 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaatagaacaaaacggtccttcaagtatca-ttttgttgc 54995511  T
Q  170 atttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctacc 234  Q
    ||||||||||||  |||||||||||||||| ||||||| | |||||||| |||||||||||||||    
T  54995510 atttttcgtcctaacccccattttattctctaaaaacgcaaagaaatgatagttttagacctacc 54995446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 66 - 181
Target Start/End: Complemental strand, 23494989 - 23494874
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||     
T  23494989 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 23494890  T
Q  166 ttgcatttttcgtcct 181  Q
    ||||||||||||||||    
T  23494889 ttgcatttttcgtcct 23494874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 65 - 235
Target Start/End: Complemental strand, 2118842 - 2118673
Alignment:
Q  65 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 164  Q
    |||| |||||||||||||||||| |||||||||||||| |||| |||| |||||||  |||||||||||| |||||||||||| ||||||||||||||||    
T  2118842 aaggtttaattacacttttggtcttcgtgttttggcctgctcatgaaactggtcctatccttttaaaacataacaaaacggtcattcaattatcattttt 2118743  T
Q  165 attgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccc 235  Q
     ||||||||||||||||  |||||||||||||||||||||||| |||||||| | ||||||||||||||||    
T  2118742 gttgcatttttcgtcct-acccccattttattctccaaaaacgcagagaaataatagttttagacctaccc 2118673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 58 - 227
Target Start/End: Complemental strand, 45082978 - 45082808
Alignment:
Q  58 taattataaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattat 157  Q
    ||||| || |||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  45082978 taattttatggcttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattat 45082879  T
Q  158 catttttattgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 227  Q
    ||||||| |||||||||||||||| || || ||||| |  ||| | ||||| |||||||||||||||||||    
T  45082878 catttttgttgcatttttcgtcctacctcctattttcaaactctagaaacgcagagaaatgacagttttag 45082808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 61 - 235
Target Start/End: Original strand, 45082426 - 45082598
Alignment:
Q  61 ttataaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcat 160  Q
    |||| ||| |||||||| ||||||||| ||||||||||| ||||||||||| | |||  ||||||||||||| |||||||||||||||||||||||||||    
T  45082426 ttattaggtttaattacgcttttggtcatcgtgttttggtctactcacgaact-ggttttgcccttttaaaatagaacaaaacggtccttcaattatcat 45082524  T
Q  161 ttttattgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccc 235  Q
    |||| ||||||||||||||||  |||||||||||||||||||||||  |||||||||||| ||||||||||||||    
T  45082525 ttttgttgcatttttcgtcct-acccccattttattctccaaaaacacagagaaatgacaattttagacctaccc 45082598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 70 - 227
Target Start/End: Original strand, 54995072 - 54995230
Alignment:
Q  70 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattgc 169  Q
    ||||||||||||||||||||||||| ||||||||||||||||| | ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  54995072 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 54995171  T
Q  170 atttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 227  Q
    |||||||||||| || || ||||| |  ||||| ||| |||||||||||||||||||||    
T  54995172 atttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 54995230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 65 - 181
Target Start/End: Complemental strand, 25938218 - 25938102
Alignment:
Q  65 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 164  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  25938218 aaggcttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacagtccttcaattatcattttt 25938119  T
Q  165 attgcatttttcgtcct 181  Q
     |||||||||| |||||    
T  25938118 gttgcattttttgtcct 25938102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 65 - 227
Target Start/End: Original strand, 11153144 - 11153307
Alignment:
Q  65 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 164  Q
    |||||||||||| ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| |||| ||||||||||||||||||||||||||    
T  11153144 aaggcttaattatacttttggtcctcgtgttttggcctactcacaaaattggtcatgcccttttaaaatagaataaaacggtccttcaattatcattttt 11153243  T
Q  165 attgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 227  Q
     |||||||||||||||| || || ||||| |  | ||| ||||| |||||||||||||||||||    
T  11153244 gttgcatttttcgtcctacctcctattttcaaaccccagaaacgcagagaaatgacagttttag 11153307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 66 - 181
Target Start/End: Complemental strand, 33110010 - 33109895
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 165  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||     
T  33110010 aggcttaattacacttttggtcctcatgttttggcctgctcacgaaattggtcctgcccttttaaaacataacaaaacggtccttcaattatcatttttg 33109911  T
Q  166 ttgcatttttcgtcct 181  Q
    ||||||||||||||||    
T  33109910 ttgcatttttcgtcct 33109895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 58 - 227
Target Start/End: Complemental strand, 12234883 - 12234713
Alignment:
Q  58 taattataaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattat 157  Q
    |||||| | |||||||||| ||||||||||||||||||||||||||||||||||| || || ||||||||||||||||||||||||||||||||||||||    
T  12234883 taattaaatggcttaattatacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaacagaacaaaacggtccttcaattat 12234784  T
Q  158 catttttattgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 227  Q
    ||||||| |||||||||||||||| || || ||||| |  | ||| ||| | |||||||||||||||||||    
T  12234783 catttttgttgcatttttcgtcctacctcctattttcaaaccccagaaatgcagagaaatgacagttttag 12234713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 66 - 227
Target Start/End: Complemental strand, 20471057 - 20470895
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 165  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| ||||| | |||||||||||||||||||||||||| ||||||||||||||||     
T  20471057 aggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcattcccttttaaaacagaacaaaacggtcattcaattatcatttttg 20470958  T
Q  166 ttgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 227  Q
    |||||||||||||||| || || ||||| |  ||||| ||||| |||||||||| ||||||||    
T  20470957 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgaaagttttag 20470895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 65 - 227
Target Start/End: Complemental strand, 48526728 - 48526565
Alignment:
Q  65 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 164  Q
    |||| ||||||| |||||||||||||||||||||| |||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  48526728 aaggtttaattatacttttggtcctcgtgttttggtctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcactttt 48526629  T
Q  165 attgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 227  Q
     |||||||||||||||| || || ||||| |  ||||| ||||  |||||||||||||||||||    
T  48526628 gttgcatttttcgtcctacctcctattttcaaactccataaacacagagaaatgacagttttag 48526565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 70 - 227
Target Start/End: Complemental strand, 4220101 - 4219943
Alignment:
Q  70 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattgc 169  Q
    ||||||||||||||||||||||||||||||||||||||||||| || |||||| ||||||||||||||||||| |||| |||||||||||||||| ||||    
T  4220101 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgctcttttaaaacagaacaaaatggtcattcaattatcatttttgttgc 4220002  T
Q  170 atttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 227  Q
    |||||||||||| || || ||||| |  || |||||||| |||||||| ||||||||||    
T  4220001 atttttcgtcctacctcctattttcaaacttcaaaaacgcagagaaataacagttttag 4219943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 66 - 227
Target Start/End: Complemental strand, 51021341 - 51021180
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 165  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||| ||||     
T  51021341 aggcttaattacacttttgatcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacacaacaaaacggtcctttaattatca-ttttg 51021243  T
Q  166 ttgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 227  Q
    |||||||||||||||| || || ||||| |  ||||| ||||| ||||||||| || ||||||    
T  51021242 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcaattttag 51021180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 66 - 207
Target Start/End: Original strand, 48293593 - 48293734
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 165  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| |  ||||||||| |||||||  || |||||||||||||||||     
T  48293593 aggcttaattacacttttggtcctcgtgttttggcttactcacgaaattgatcctgtctctttaaaacaaaacaaaattgttcttcaattatcatttttg 48293692  T
Q  166 ttgcatttttcgtcctgccccccattttattctccaaaaacg 207  Q
    ||||||||||| |||||||| |||||||||||||||||||||    
T  48293693 ttgcatttttcatcctgccctccattttattctccaaaaacg 48293734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 69 - 181
Target Start/End: Original strand, 2118295 - 2118407
Alignment:
Q  69 cttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattg 168  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||  |||||||||||||||||||| |||    
T  2118295 cttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacataacaaaatagtccttcaattatcatttttgttg 2118394  T
Q  169 catttttcgtcct 181  Q
    |||||||||||||    
T  2118395 catttttcgtcct 2118407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 65 - 180
Target Start/End: Original strand, 18751597 - 18751712
Alignment:
Q  65 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 164  Q
    |||| ||||||||||||||||||||||||||||||||||||||  ||| ||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  18751597 aaggtttaattacacttttggtcctcgtgttttggcctactcataaaactggtcatgcccttttaaaacagaacaaaacggtccttcaaatatcattttt 18751696  T
Q  165 attgcatttttcgtcc 180  Q
     |||||||||||||||    
T  18751697 gttgcatttttcgtcc 18751712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 68 - 207
Target Start/End: Complemental strand, 20958403 - 20958266
Alignment:
Q  68 gcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttatt 167  Q
    |||||||||||||||| |||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||   |||||||||||||||||||| ||    
T  20958403 gcttaattacacttttagtcctcgtattttggcctactcacgaaaatggtcctgcccttttaaaacagaacaaatatgtccttcaattatcatttttgtt 20958304  T
Q  168 gcatttttcgtcctgccccccattttattctccaaaaacg 207  Q
    |||||||| |||||  |||||||||||| |||||||||||    
T  20958303 gcattttt-gtcct-acccccattttatcctccaaaaacg 20958266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 69 - 182
Target Start/End: Complemental strand, 18764063 - 18763950
Alignment:
Q  69 cttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattg 168  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||| || |||||||||||||||||||| |||| ||||| |||||||||| |||    
T  18764063 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgtccttttaaaacagaacaaaatggtcattcaagtatcatttttgttg 18763964  T
Q  169 catttttcgtcctg 182  Q
    ||||||||||||||    
T  18763963 catttttcgtcctg 18763950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 68 - 207
Target Start/End: Complemental strand, 44892692 - 44892553
Alignment:
Q  68 gcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttatt 167  Q
    ||||||||| | ||||||||||||||||||| ||||||||||||| |||| ||||| ||||||||||||||||||| ||| |||||||||  ||||| ||    
T  44892692 gcttaattatatttttggtcctcgtgttttgacctactcacgaaaatggttctgccattttaaaacagaacaaaactgtctttcaattatattttttgtt 44892593  T
Q  168 gcatttttcgtcctgccccccattttattctccaaaaacg 207  Q
    |||||||||||||| ||| ||||||||| |||||||||||    
T  44892592 gcatttttcgtcctaccctccattttatcctccaaaaacg 44892553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 70 - 207
Target Start/End: Complemental strand, 48713888 - 48713751
Alignment:
Q  70 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattgc 169  Q
    ||||||||||||||  | |||||||||| ||||||||| |||| ||||| ||| |||||||||||||||||||  |||||||||||||||||||| ||||    
T  48713888 ttaattacacttttaattctcgtgttttagcctactcatgaaaatggtcatgctcttttaaaacagaacaaaattgtccttcaattatcatttttgttgc 48713789  T
Q  170 atttttcgtcctgccccccattttattctccaaaaacg 207  Q
    |||||||||||| ||| ||||||||| |||||||||||    
T  48713788 atttttcgtcctcccctccattttatcctccaaaaacg 48713751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 135 - 235
Target Start/End: Complemental strand, 12503913 - 12503813
Alignment:
Q  135 gaacaaaacggtccttcaattatcatttttattgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctacc 234  Q
    ||||||||||||||||||| |||||||||| |||||||||||||| | ||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  12503913 gaacaaaacggtccttcaagtatcatttttgttgcatttttcgtcataccccccattttattctccaaaaacgcagagaaatgacagttttagacctacc 12503814  T
Q  235 c 235  Q
    |    
T  12503813 c 12503813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 85 - 207
Target Start/End: Complemental strand, 43243807 - 43243686
Alignment:
Q  85 gtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattgcatttttcgtcctgcc 184  Q
    |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||  || ||||||||||||||||| |||||||||| |||||  |    
T  43243807 gtcctcgtgttttggcctactcacgaaaatggtcatgcccttttaaaacagaacaaaattgttcttcaattatcatttttgttgcattttttgtcct-ac 43243709  T
Q  185 ccccattttattctccaaaaacg 207  Q
    ||||||||||| |||||||||||    
T  43243708 ccccattttatcctccaaaaacg 43243686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 62 - 193
Target Start/End: Complemental strand, 10258437 - 10258306
Alignment:
Q  62 tataaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 161  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||  ||||  ||  |||||||||||||    
T  10258437 tataaggcttaattacacttttggtcctcgtgttgtggcctactcaggaaattggtcctgcccttttaaaacagattaaaattgtttttcaattatcatt 10258338  T
Q  162 tttattgcatttttcgtcctgccccccatttt 193  Q
    ||| ||||| |||| ||| | ||||| |||||    
T  10258337 tttgttgcagttttagtcttaccccctatttt 10258306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 65 - 203
Target Start/End: Original strand, 16690934 - 16691072
Alignment:
Q  65 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 164  Q
    |||| ||||||||| |||||||||| ||||||||  |||||||||||| ||||||||||  ||||||||| |||||||   |||||||||||||||||||    
T  16690934 aaggtttaattacatttttggtccttgtgttttgatctactcacgaaaatggtcctgcctctttaaaacaaaacaaaattatccttcaattatcattttt 16691033  T
Q  165 attgcatttttcgtcctgccccccattttattctccaaa 203  Q
     |||||||||||||||| ||||| ||||||| |||||||    
T  16691034 gttgcatttttcgtcctacccccgattttatcctccaaa 16691072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 67 - 207
Target Start/End: Complemental strand, 48295088 - 48294947
Alignment:
Q  67 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttat 166  Q
    |||||||||||| |||||||| ||||||||||  |||||||||||||||||| ||||  ||||||||| |||||||  ||| |||||||||||||||| |    
T  48295088 ggcttaattacatttttggtcatcgtgttttgatctactcacgaaattggtcttgcctctttaaaacacaacaaaattgtcattcaattatcatttttgt 48294989  T
Q  167 tgcattttt-cgtcctgccccccattttattctccaaaaacg 207  Q
    ||||||||| |||||| |||||||||||||  ||||||||||    
T  48294988 tgcatttttccgtcctaccccccattttatcttccaaaaacg 48294947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 66 - 203
Target Start/End: Original strand, 48708294 - 48708431
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 165  Q
    |||||||||||||||||||||||  |||||||||||||  ||||||| || |||||||||||||||||| |||||||| ||||||||||||||||||||     
T  48708294 aggcttaattacacttttggtccatgtgttttggcctaaccacgaaaatgatcctgcccttttaaaacacaacaaaactgtccttcaattatcatttttg 48708393  T
Q  166 ttgcatttttcgtcctgccccccattttattctccaaa 203  Q
    |||||||| |  |||| || | |||||||| |||||||    
T  48708394 ttgcatttataatcctaccactcattttatcctccaaa 48708431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 67 - 178
Target Start/End: Complemental strand, 35363146 - 35363034
Alignment:
Q  67 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgccctttt-aaaacagaacaaaacggtccttcaattatcattttta 165  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| |||| |||| ||||| |||| | |||||||||||| ||||||||||||||||     
T  35363146 ggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggttctgctcttttaaaaaaaaaacaaaacggtcattcaattatcatttttg 35363047  T
Q  166 ttgcatttttcgt 178  Q
    |||||||||||||    
T  35363046 ttgcatttttcgt 35363034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 85 - 205
Target Start/End: Complemental strand, 43281317 - 43281198
Alignment:
Q  85 gtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattgcatttttcgtcctgcc 184  Q
    |||||||||||||||||||||||||||| ||||| |||| ||||||||||||||||||  || |||||||||| |||||| |||||||||||||||| ||    
T  43281317 gtcctcgtgttttggcctactcacgaaaatggtcatgccattttaaaacagaacaaaaatgttcttcaattat-atttttgttgcatttttcgtcctacc 43281219  T
Q  185 ccccattttattctccaaaaa 205  Q
    ||||||||||| ||| |||||    
T  43281218 ccccattttatcctcaaaaaa 43281198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 58 - 207
Target Start/End: Original strand, 44890508 - 44890657
Alignment:
Q  58 taattataaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattat 157  Q
    |||||| || ||||||||||| |||||||||| |||||||| |||| |||||||| ||||| |||||||||||||||||||||||   ||||| ||||||    
T  44890508 taattaaaatgcttaattacaattttggtccttgtgttttgacctattcacgaaaatggtcatgcccttttaaaacagaacaaaaatatcctttaattat 44890607  T
Q  158 catttttattgcatttttcgtcctgccccccattttattctccaaaaacg 207  Q
      ||||| ||||||||||| || | ||||||||||||| ||| |||||||    
T  44890608 attttttgttgcatttttcatcataccccccattttatcctcaaaaaacg 44890657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 84 - 227
Target Start/End: Original strand, 12503453 - 12503597
Alignment:
Q  84 ggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattgcatttttcgtcctgc 183  Q
    ||||||||||||||| | ||||||||||| || ||| ||| ||||||||||||||||||  |||||||||||||||||||| |||||||||||||||| |    
T  12503453 ggtcctcgtgttttgacttactcacgaaactgatcccgccattttaaaacagaacaaaattgtccttcaattatcatttttgttgcatttttcgtcctac 12503552  T
Q  184 cccccatttt-attctccaaaaacgtagagaaatgacagttttag 227  Q
    | || ||||| |  ||||| ||||| |||||||| ||||||||||    
T  12503553 ctcctattttcaaactccagaaacgcagagaaattacagttttag 12503597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 74 - 205
Target Start/End: Original strand, 20957196 - 20957327
Alignment:
Q  74 ttacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattgcattt 173  Q
    ||||| |||||||||||| |||||||| ||||||||||| ||||| | | ||||||||||| |||||||  ||||||||||||||| |||| ||||||||    
T  20957196 ttacatttttggtcctcgagttttggcttactcacgaaaatggtcatactcttttaaaacacaacaaaattgtccttcaattatcaattttgttgcattt 20957295  T
Q  174 ttcgtcctgccccccattttattctccaaaaa 205  Q
    |||||| | | ||||||||||||||| |||||    
T  20957296 ttcgtcatactccccattttattctcaaaaaa 20957327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 65 - 137
Target Start/End: Complemental strand, 16318323 - 16318251
Alignment:
Q  65 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaa 137  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||| || |||||||||||||||||||||    
T  16318323 aaggcttaattacacttttggtcctcgtgttttggcctactcacaaaactgatcctgcccttttaaaacagaa 16318251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 67 - 203
Target Start/End: Complemental strand, 16691616 - 16691481
Alignment:
Q  67 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttat 166  Q
    |||||||||||||||||| |||  |||||||| ||||||||||||| |||||||| ||| || ||||| |||||||  |||||| |||||| |||||| |    
T  16691616 ggcttaattacacttttgatccctgtgttttgacctactcacgaaaatggtcctg-cctctttaaacataacaaaattgtcctttaattattatttttgt 16691518  T
Q  167 tgcatttttcgtcctgccccccattttattctccaaa 203  Q
    ||||||||||||| | || |||||||||| |||||||    
T  16691517 tgcatttttcgtcatacctcccattttatcctccaaa 16691481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 125 - 207
Target Start/End: Original strand, 43242328 - 43242410
Alignment:
Q  125 ttttaaaacagaacaaaacggtccttcaattatcatttttattgcatttttcgtcctgccccccattttattctccaaaaacg 207  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| || || |||||||  ||||||||||    
T  43242328 ttttaaaacagaacaaaacggtcattcaattatcattttttttgcatttttcgtcctacctccaattttatcatccaaaaacg 43242410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 64 - 235
Target Start/End: Original strand, 17503971 - 17504141
Alignment:
Q  64 taaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 163  Q
    ||||||||||||| ||| ||||||||||  ||||| ||  ||||||||| ||||||||||  ||| |||  ||||| ||| |||||  || |||||| ||    
T  17503971 taaggcttaattatactgttggtcctcgcattttgaccatctcacgaaaatggtcctgcctctttcaaatggaacataaccgtccta-aactatcatgtt 17504069  T
Q  164 tattgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccc 235  Q
    | ||||| |||| ||||| || || |||||   ||||| |||||||||||||||||||||||||||||||||    
T  17504070 ttttgcagttttagtcctacctcctattttcaactccagaaacgtagagaaatgacagttttagacctaccc 17504141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 67 - 164
Target Start/End: Original strand, 55189528 - 55189625
Alignment:
Q  67 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 164  Q
    |||||||||| | ||||| ||||||||||||| |||| |||  ||| ||||  ||||||||||||| |||||||||  ||| ||||||||||||||||    
T  55189528 ggcttaattatatttttgatcctcgtgttttgacctattcataaaaatggttatgcccttttaaaatagaacaaaattgtctttcaattatcattttt 55189625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 64 - 120
Target Start/End: Complemental strand, 55677507 - 55677451
Alignment:
Q  64 taaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcct 120  Q
    |||||||||||||||||||||||||| || ||||| || ||||||||||||||||||    
T  55677507 taaggcttaattacacttttggtccttgtattttgaccaactcacgaaattggtcct 55677451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 176 - 235
Target Start/End: Complemental strand, 18752038 - 18751979
Alignment:
Q  176 cgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccc 235  Q
    |||||| ||||| ||||||||||||||||| | |||||||| ||||||||||||||||||    
T  18752038 cgtcctaccccctattttattctccaaaaatgcagagaaataacagttttagacctaccc 18751979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 128 - 207
Target Start/End: Complemental strand, 44220861 - 44220782
Alignment:
Q  128 taaaacagaacaaaacggtccttcaattatcatttttattgcatttttcgtcctgccccccattttattctccaaaaacg 207  Q
    |||||||||||||||  |||||||| ||||||||||| || |||||||||| || ||||  ||||||| |||||||||||    
T  44220861 taaaacagaacaaaattgtccttcatttatcatttttgtttcatttttcgttctacccctaattttatcctccaaaaacg 44220782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 67 - 207
Target Start/End: Complemental strand, 30598065 - 30597926
Alignment:
Q  67 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctg-cccttttaaaacagaacaaaacggtccttcaattatcattttta 165  Q
    ||||| |||||||||||||||||||||||||| || ||||||| ||||||| ||| | |||||||| | ||||||||  |||| | |||||| ||||||     
T  30598065 ggcttgattacacttttggtcctcgtgttttgaccaactcacggaattggttctgtctcttttaaatc-gaacaaaatcgtccctaaattat-atttttg 30597968  T
Q  166 ttgcatttttcgtcctgccccccattttattctccaaaaacg 207  Q
    ||||| |||| |||||  |||| ||||||   ||||||||||    
T  30597967 ttgcacttttggtcctaacccctattttaacatccaaaaacg 30597926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 120
Target Start/End: Original strand, 44219377 - 44219428
Alignment:
Q  69 cttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcct 120  Q
    |||||||||||||||||||||||| ||||  || ||||||||||||||||||    
T  44219377 cttaattacacttttggtcctcgtattttaaccaactcacgaaattggtcct 44219428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 66 - 120
Target Start/End: Complemental strand, 46737202 - 46737148
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcct 120  Q
    |||||||||||||||||||||||| |  ||||| || ||||||||||||||||||    
T  46737202 aggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcct 46737148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 59 - 120
Target Start/End: Complemental strand, 21034791 - 21034730
Alignment:
Q  59 aattataaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcct 120  Q
    |||| ||||||||||||||| |||||||||| |  ||||| || ||||||||||||||||||    
T  21034791 aattttaaggcttaattacaattttggtccttgcattttgaccaactcacgaaattggtcct 21034730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 59 - 120
Target Start/End: Complemental strand, 34789937 - 34789876
Alignment:
Q  59 aattataaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcct 120  Q
    |||||| || ||||||||||||||||||||| |  ||||| || ||||||||||||||||||    
T  34789937 aattattagacttaattacacttttggtccttgcattttgaccaactcacgaaattggtcct 34789876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 118
Target Start/End: Complemental strand, 12593570 - 12593518
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtc 118  Q
    |||||||||||||||||||||||| |  ||||| || ||||||||||||||||    
T  12593570 aggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtc 12593518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 69 - 232
Target Start/End: Complemental strand, 24336307 - 24336144
Alignment:
Q  69 cttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattg 168  Q
    |||||||||||||||| ||||||  ||||| |   ||||||||| ||||||||||  ||| |||  ||||||||| || | | ||||||||| ||| |||    
T  24336307 cttaattacacttttgatcctcgcattttgacaagctcacgaaaatggtcctgcctctttcaaatcgaacaaaaccgttcctaaattatcatgttttttg 24336208  T
Q  169 catttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagaccta 232  Q
    |  |||| ||||| ||||  |||||   ||||| ||||||| ||||||| ||| ||||| ||||    
T  24336207 ctcttttagtcctaccccatattttcaactccagaaacgtatagaaatggcagctttagtccta 24336144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 69 - 120
Target Start/End: Original strand, 54440573 - 54440624
Alignment:
Q  69 cttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcct 120  Q
    ||||||||||||||||||||| |  ||||| || ||||||||||||||||||    
T  54440573 cttaattacacttttggtccttgcattttgaccaactcacgaaattggtcct 54440624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 120
Target Start/End: Original strand, 19528868 - 19528922
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcct 120  Q
    |||||||||||||||||||||||| |  ||||| || | ||||||||||||||||    
T  19528868 aggcttaattacacttttggtccttgcattttgaccaattcacgaaattggtcct 19528922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 120
Target Start/End: Original strand, 33689828 - 33689882
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcct 120  Q
    |||||||||||||||||||||||| |  ||||| || |||||| |||||||||||    
T  33689828 aggcttaattacacttttggtccttgcattttgaccaactcacaaaattggtcct 33689882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 120
Target Start/End: Complemental strand, 41608962 - 41608908
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcct 120  Q
    ||||||||||||||||||||||||    ||||| || ||||||||||||||||||    
T  41608962 aggcttaattacacttttggtcctaccattttgaccaactcacgaaattggtcct 41608908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 120
Target Start/End: Original strand, 45838546 - 45838600
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcct 120  Q
    ||||||| |||||||||||||||| || ||||| || ||||||| ||||||||||    
T  45838546 aggcttatttacacttttggtccttgtattttgaccaactcacgtaattggtcct 45838600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 235
Target Start/End: Complemental strand, 17504369 - 17504337
Alignment:
Q  203 aaacgtagagaaatgacagttttagacctaccc 235  Q
    ||||| |||||||||||||||||||||||||||    
T  17504369 aaacgcagagaaatgacagttttagacctaccc 17504337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 118
Target Start/End: Original strand, 34807115 - 34807167
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtc 118  Q
    |||||||||||||||||||||||| |  |||||  | ||||||||||||||||    
T  34807115 aggcttaattacacttttggtccttgcattttgatcaactcacgaaattggtc 34807167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 235
Target Start/End: Original strand, 35193443 - 35193475
Alignment:
Q  203 aaacgtagagaaatgacagttttagacctaccc 235  Q
    ||||| |||||||||||||||||||||||||||    
T  35193443 aaacgcagagaaatgacagttttagacctaccc 35193475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 154; Significance: 8e-82; HSPs: 49)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 66 - 235
Target Start/End: Complemental strand, 2865301 - 2865132
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||     
T  2865301 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 2865202  T
Q  166 ttgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccc 235  Q
    || ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2865201 tttcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccc 2865132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 66 - 235
Target Start/End: Complemental strand, 18183515 - 18183346
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||     
T  18183515 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 18183416  T
Q  166 ttgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccc 235  Q
    |||||||||||||||| |||| |||||||||||||||||||| |||||||| ||||||||||||||||||    
T  18183415 ttgcatttttcgtcctacccctcattttattctccaaaaacgcagagaaataacagttttagacctaccc 18183346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 67 - 235
Target Start/End: Original strand, 8647438 - 8647606
Alignment:
Q  67 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttat 166  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| ||||||||||||||||||||| |    
T  8647438 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccgttttaaaacagaacaaaatggtccttcaattatcatttttgt 8647537  T
Q  167 tgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccc 235  Q
    ||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  8647538 tgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 8647606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 64 - 234
Target Start/End: Complemental strand, 29455290 - 29455120
Alignment:
Q  64 taaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 163  Q
    |||||||||||||||| ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  29455290 taaggcttaattacacctttggtcctcgtgttttggtctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaattatcatttt 29455191  T
Q  164 tattgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctacc 234  Q
    | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  29455190 tgttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacatacc 29455120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 62 - 235
Target Start/End: Original strand, 19359131 - 19359304
Alignment:
Q  62 tataaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 161  Q
    |||| |||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  19359131 tatatggcttaattacacttttggtcctcttgttttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaacggtccttcaattatcatt 19359230  T
Q  162 tttattgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccc 235  Q
    ||| |||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| |||||||||||    
T  19359231 tttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttctagacctaccc 19359304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 67 - 235
Target Start/End: Complemental strand, 5819474 - 5819306
Alignment:
Q  67 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttat 166  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| |    
T  5819474 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 5819375  T
Q  167 tgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccc 235  Q
    ||||||||||||||| ||||||||||||||||||||||||| | |||||||||||||||||| ||||||    
T  5819374 tgcatttttcgtcctaccccccattttattctccaaaaacgcaaagaaatgacagttttagatctaccc 5819306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 66 - 229
Target Start/End: Complemental strand, 24362382 - 24362219
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 165  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||| ||||||||||     
T  24362382 aggcttaattacacttttggtcctcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaataaaacggtccttcaagtatcatttttg 24362283  T
Q  166 ttgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagac 229  Q
    |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||    
T  24362282 ttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagac 24362219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 66 - 235
Target Start/End: Complemental strand, 14215789 - 14215620
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 165  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||||| || ||||||||||||||||||||||||||||||||||||| ||||||||||     
T  14215789 aggcttaattacaattttggtcctcgtgttttgacctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaagtatcatttttg 14215690  T
Q  166 ttgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccc 235  Q
    |||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14215689 ttgcatttttcgtcttaacccccattttattctccaaaaacgtagagaaatgacagttttagacctaccc 14215620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 66 - 235
Target Start/End: Original strand, 8460929 - 8461098
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 165  Q
    |||||||||| ||||||||||| |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||     
T  8460929 aggcttaattccacttttggtcatcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 8461028  T
Q  166 ttgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccc 235  Q
    |||||||||||||| | ||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  8461029 ttgcatttttcgtcataccccccattttattctccaaaaatgcagagaaatgacagttttagacctaccc 8461098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 66 - 235
Target Start/End: Original strand, 15708970 - 15709138
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 165  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| ||||  |||||||||||||||||||||||||||||||||||||||||||||     
T  15708970 aggcttaattacacttttggtcctagtgttttggcctactcacgaaactggttatgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 15709069  T
Q  166 ttgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccc 235  Q
    |||||| |||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  15709070 ttgcatatttcgtcct-acccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 15709138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 70 - 234
Target Start/End: Complemental strand, 15372415 - 15372251
Alignment:
Q  70 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattgc 169  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||    
T  15372415 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaagtatcatttttgttgc 15372316  T
Q  170 atttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctacc 234  Q
    |||||| || || |  ||||||||||| |||||||||| ||||||||||||||||||||||||||    
T  15372315 attttttgttctacatcccattttattttccaaaaacgcagagaaatgacagttttagacctacc 15372251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 66 - 235
Target Start/End: Complemental strand, 164737 - 164568
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 165  Q
    ||||||||||| | ||||| ||||| |||||||||| |||||| ||| ||||| |||||||||||||||||||||||||||||||||||||||||||||     
T  164737 aggcttaattataattttgatcctcatgttttggccaactcactaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 164638  T
Q  166 ttgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccc 235  Q
    |||||||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  164637 ttgcattttttgtcctaccccccattttattctccaaaaatgtagagaaatgacagttttagacctaccc 164568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 65 - 235
Target Start/End: Original strand, 16018587 - 16018755
Alignment:
Q  65 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 164  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||||||| || ||||||||||||| |||||||||||||||||||||||| ||||||    
T  16018587 aaggcttaattacacttttggtcttcgtgttttggcctattcacgaaattgatcatgcccttttaaaatagaacaaaacggtccttcaattat-attttt 16018685  T
Q  165 attgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccc 235  Q
    |||||||||| ||||||  ||||||||||||||||||||||  |||| |||||||||||||||||||||||    
T  16018686 attgcattttccgtcct-acccccattttattctccaaaaatatagaaaaatgacagttttagacctaccc 16018755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 66 - 227
Target Start/End: Complemental strand, 19359682 - 19359520
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||     
T  19359682 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 19359583  T
Q  166 ttgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 227  Q
    ||| |||||||||||| || || ||||| |  ||||| ||||||||||||||| |||||||||    
T  19359582 ttggatttttcgtcctacctcctattttcaaactccagaaacgtagagaaatggcagttttag 19359520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 66 - 232
Target Start/End: Complemental strand, 14464066 - 14463901
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 165  Q
    |||||||||||||||||| |||||||||||||||||||||||||||| |  |  || |||||||||| ||||||||||| ||||||||||||||||||||    
T  14464066 aggcttaattacacttttagtcctcgtgttttggcctactcacgaaactaattttgtccttttaaaatagaacaaaacgatccttcaattatcattttta 14463967  T
Q  166 ttgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagaccta 232  Q
    ||||||||||||||||  |||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  14463966 ttgcatttttcgtcct-accccaattttattctccaaaaacgcagagaaatgacagttttagaccta 14463901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 89 - 234
Target Start/End: Original strand, 25000112 - 25000257
Alignment:
Q  89 tcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattgcatttttcgtcctgcccccc 188  Q
    ||||||||||||||||||||||| |||||| |||||| ||||||||||| |||| ||||||| |||||||||||||||||||||||| ||||| ||||||    
T  25000112 tcgtgttttggcctactcacgaatttggtcatgccctgttaaaacagaataaaatggtcctttaattatcatttttattgcattttttgtcctacccccc 25000211  T
Q  189 attttattctccaaaaacgtagagaaatgacagttttagacctacc 234  Q
    |||||||||||||||||||||||||||||||||||||||| |||||    
T  25000212 attttattctccaaaaacgtagagaaatgacagttttagatctacc 25000257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 70 - 227
Target Start/End: Original strand, 5818932 - 5819090
Alignment:
Q  70 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattgc 169  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||    
T  5818932 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtctttcaattatcatttttgttgc 5819031  T
Q  170 atttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 227  Q
    |||||||||| | || || ||||| |  ||||| ||||| |||||||||||||||||||    
T  5819032 atttttcgtcttacctcctattttcaaactccagaaacgcagagaaatgacagttttag 5819090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 66 - 227
Target Start/End: Complemental strand, 8647984 - 8647822
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||     
T  8647984 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 8647885  T
Q  166 ttgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 227  Q
    |||||||||||||| | ||  | ||||| |  ||||| ||||| |||||||||||||||||||    
T  8647884 ttgcatttttcgtcataccttctattttcaaactccataaacgcagagaaatgacagttttag 8647822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 70 - 227
Target Start/End: Original strand, 18182973 - 18183131
Alignment:
Q  70 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattgc 169  Q
    |||||||||||||||||| |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  18182973 ttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 18183072  T
Q  170 atttttcgtcctgcccccca-ttttattctccaaaaacgtagagaaatgacagttttag 227  Q
    |||||||||||| || || | |||||| | ||| ||||| |||||||||||||||||||    
T  18183073 atttttcgtcctacctcctatttttataccccagaaacgcagagaaatgacagttttag 18183131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 69 - 227
Target Start/End: Original strand, 2864756 - 2864915
Alignment:
Q  69 cttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattg 168  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| || ||||||||||||||| ||||||||||||||||||||||||||||| |||    
T  2864756 cttaattacacttttggtccttgtgttttggcctactcacgaaattgatcatgcccttttaaaacataacaaaacggtccttcaattatcatttttgttg 2864855  T
Q  169 catttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 227  Q
    ||||||||||||| || || ||||| |  ||||| ||||| |||||||||||||||||||    
T  2864856 catttttcgtcctacctcctattttcaaactccataaacgcagagaaatgacagttttag 2864915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 64 - 227
Target Start/End: Complemental strand, 8461479 - 8461315
Alignment:
Q  64 taaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| || |||||| ||||||||||||||||||||||||||||||||||||||||    
T  8461479 taaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgttcctgctcttttaaaacagaacaaaacggtccttcaattatcatttt 8461380  T
Q  164 tattgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 227  Q
    |  ||||||||||||| | || || ||||| |  ||||| ||||| |||||||||||| ||||||    
T  8461379 tgctgcatttttcgtcatacctcctattttcaaactccagaaacgcagagaaatgacaattttag 8461315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 73 - 227
Target Start/End: Original strand, 24361843 - 24361997
Alignment:
Q  73 attacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattgcatt 172  Q
    |||||||||||||||| | ||||||||||||| ||||||| || || ||||||| ||||||||||||||| |||||||||| |||||||||| |||||||    
T  24361843 attacacttttggtccccatgttttggcctacccacgaaactgatcatgcccttgtaaaacagaacaaaatggtccttcaagtatcatttttgttgcatt 24361942  T
Q  173 tttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttag 227  Q
    ||||||||| ||||||||||||||||||| ||||| |||||||||| ||||||||    
T  24361943 tttcgtcctaccccccattttattctccacaaacgcagagaaatgatagttttag 24361997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 65 - 229
Target Start/End: Complemental strand, 25000636 - 25000471
Alignment:
Q  65 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 164  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||||||||| ||  ||||||||||||||||||| |||| ||||||||||||||||    
T  25000636 aaggcttaattacacttttggtcttcatgttttggcctactcacgaaattggtcatgttcttttaaaacagaacaaaatggtcattcaattatcattttt 25000537  T
Q  165 attgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttagac 229  Q
     |||||||||||||||  || || ||||| |  ||||||||||| |||||||||||||||||||||    
T  25000536 gttgcatttttcgtcccacctcctattttcaaactccaaaaacgcagagaaatgacagttttagac 25000471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 64 - 227
Target Start/End: Original strand, 29454737 - 29454901
Alignment:
Q  64 taaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 163  Q
    |||||||||||| ||||||||||| | |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||    
T  29454737 taaggcttaatttcacttttggtcattgtgttttggcctactcacgaaattggtcatgcccttttaaaacagaacaaaacggtccttgaattatcatttt 29454836  T
Q  164 tattgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 227  Q
    |  ||||||||||||||| || || ||||| |  ||||| ||||| |||||||||| ||||||||    
T  29454837 tgctgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgatagttttag 29454901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 73 - 227
Target Start/End: Original strand, 24325218 - 24325372
Alignment:
Q  73 attacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattgcatt 172  Q
    |||||||||||||||| | ||||||||||||| ||||||| || || ||||||| ||||||||||||||| |||||||||| |||||||||| | |||||    
T  24325218 attacacttttggtccccatgttttggcctacccacgaaactgatcatgcccttgtaaaacagaacaaaatggtccttcaagtatcatttttgtcgcatt 24325317  T
Q  173 tttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttag 227  Q
    ||||||||| ||||||||||||||||||| ||||| |||||||||| ||||||||    
T  24325318 tttcgtcctaccccccattttattctccacaaacgcagagaaatgatagttttag 24325372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 67 - 207
Target Start/End: Complemental strand, 7349562 - 7349422
Alignment:
Q  67 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttat 166  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||| ||||||||  ||||||| ||||||||||| |    
T  7349562 ggcttaattacacttttggtcctcgtgttttggtctactcacgaaattggtcctgctcttttaaaacaaaacaaaactatccttcagttatcatttttgt 7349463  T
Q  167 tgcatttttcgtcctgccccccattttattctccaaaaacg 207  Q
    |||| ||||| |||| ||||||||||| | |||||||||||    
T  7349462 tgcacttttcatcctaccccccattttttcctccaaaaacg 7349422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 69 - 227
Target Start/End: Original strand, 14215243 - 14215402
Alignment:
Q  69 cttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattg 168  Q
    |||||||||||||||||||||||||||||||| ||||||||||| ||||  | ||||||||||||||||||||| ||||||||| ||||||||||| |||    
T  14215243 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggttatacccttttaaaacagaacaaaaaggtccttcagttatcatttttgttg 14215342  T
Q  169 catttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 227  Q
    ||||||||||||| || || ||||| |  ||||| ||||| |||||||||||||||||||    
T  14215343 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 14215402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 69 - 232
Target Start/End: Complemental strand, 24332107 - 24331940
Alignment:
Q  69 cttaattacactttt-ggtcctcgtgttttggcctactcacgaaattggtcctgccctttt-aaaacagaacaaaacggtccttcaattatcattttta- 165  Q
    ||||||||||||||| |||| || ||||||||| ||||||||||| || ||||||| |||| ||||||||||||||||||||| ||||||||||||||      
T  24332107 cttaattacactttttggtcatcatgttttggcatactcacgaaactgatcctgccttttttaaaacagaacaaaacggtcctgcaattatcattttttg 24332008  T
Q  166 ttgcattttt-cgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagaccta 232  Q
    |||||||||| |||||| ||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  24332007 ttgcattttttcgtcctaccccccattctattctccaaaaacgcagagaaatgacagttttagaccta 24331940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 66 - 227
Target Start/End: Original strand, 24331558 - 24331722
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatc--atttt 163  Q
    |||||||||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||   ||||    
T  24331558 aggcttaattacacttttggtcctcgtgttttgatctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatctattttt 24331657  T
Q  164 tattgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 227  Q
    | ||||||||||| ||||  | || ||||| |  ||||| ||||| |||||||||||||||||||    
T  24331658 tgttgcatttttcatcctagctcctattttcaaactccagaaacgcagagaaatgacagttttag 24331722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 67 - 226
Target Start/End: Original strand, 164191 - 164350
Alignment:
Q  67 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttat 166  Q
    |||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||| |||| |||||||||||| ||||||||||| |||| |    
T  164191 ggcttaattacacttttggtcctcgtgttttgacctactcacgaaactggtcctgcccttttataacaaaacaaaacggtcattcaattatca-ttttgt 164289  T
Q  167 tgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagtttta 226  Q
    ||||||||||||||| || || ||||| |  ||||| ||||| |||||||||||| |||||    
T  164290 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacaatttta 164350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 70 - 229
Target Start/End: Complemental strand, 16019129 - 16018969
Alignment:
Q  70 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattgc 169  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||||||||||| ||||||||| |||| |||| ||| ||||||||||||||||| |||     
T  16019129 ttaattacacttttggtcctcatgttttggcatactcacgaaattggtcctgctcttttaaaatagaataaaatggttcttcaattatcatttttgttgt 16019030  T
Q  170 atttttcgtcctgcccccca-ttttattctccaaaaacgtagagaaatgacagttttagac 229  Q
    |||||||||||| || || | |||||  ||||| ||||| |||||||||||||||||||||    
T  16019029 atttttcgtcctacctcctatttttaaactccagaaacgcagagaaatgacagttttagac 16018969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 67 - 208
Target Start/End: Original strand, 4623148 - 4623287
Alignment:
Q  67 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttat 166  Q
    ||||||||||||||||||||| |||||||||| | ||||||||||||||||||||||  |||||||||||||||||  ||||||||||||||||||||||    
T  4623148 ggcttaattacacttttggtcatcgtgttttgacttactcacgaaattggtcctgcctctttaaaacagaacaaaattgtccttcaattatcatttttat 4623247  T
Q  167 tgcatttttcgtcctgccccccattttattctccaaaaacgt 208  Q
     ||||||| ||||||   ||||||||||| ||||||||||||    
T  4623248 ggcattttccgtcct--accccattttatcctccaaaaacgt 4623287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 68 - 187
Target Start/End: Complemental strand, 4222266 - 4222147
Alignment:
Q  68 gcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttatt 167  Q
    |||||||||||||||||||||||||||||||| || ||||||||| ||||| |||||||||||||||||||||||  ||| |||| ||||||||||||||    
T  4222266 gcttaattacacttttggtcctcgtgttttgggcttctcacgaaaatggtcatgcccttttaaaacagaacaaaattgtcattcagttatcatttttatt 4222167  T
Q  168 gcatttttcgtcctgccccc 187  Q
    |||||||||||||| |||||    
T  4222166 gcatttttcgtcctaccccc 4222147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 69 - 180
Target Start/End: Original strand, 15371873 - 15371983
Alignment:
Q  69 cttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattg 168  Q
    |||||||||||||||| ||||||| |||||| ||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| |||    
T  15371873 cttaattacacttttgatcctcgtattttggtctactcacgaa-ttggtcctgcccttttaaaacagaacaaaatggtccttcaattatcatttttgttg 15371971  T
Q  169 catttttcgtcc 180  Q
    ||||||||||||    
T  15371972 catttttcgtcc 15371983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 61 - 193
Target Start/End: Original strand, 7348553 - 7348685
Alignment:
Q  61 ttataaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcat 160  Q
    ||||| |||||||||||| ||||||||||| |||||| | |||||||||||||||||| ||||||||||||||||||||||||  ||||||  |||||||    
T  7348553 ttatatggcttaattacatttttggtcctcatgttttagtctactcacgaaattggtcgtgcccttttaaaacagaacaaaactttccttcggttatcat 7348652  T
Q  161 ttttattgcatttttcgtcctgccccccatttt 193  Q
    |||| ||||| |||||||||| |||||||||||    
T  7348653 ttttgttgcacttttcgtcctaccccccatttt 7348685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 67 - 227
Target Start/End: Complemental strand, 15709513 - 15709353
Alignment:
Q  67 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttat 166  Q
    ||||||||||||||||||||| | ||||||||||||||||| |||| | ||| |||||||| |||||||||||||||||||||| | ||||||||| | |    
T  15709513 ggcttaattacacttttggtcattgtgttttggcctactcatgaaactagtcatgcccttt-aaaacagaacaaaacggtcctttagttatcatttctgt 15709415  T
Q  167 tgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 227  Q
    ||||||||||||||| || || ||||| |  ||||| || || |||||||||||||||||||    
T  15709414 tgcatttttcgtcctacctcctattttcaaactccataagcgcagagaaatgacagttttag 15709353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 67 - 205
Target Start/End: Original strand, 4219663 - 4219800
Alignment:
Q  67 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttat 166  Q
    |||||||||||||||||| |||||||||||||| ||| | || ||| ||||| |||| |||||||||||||||||   |||||| | ||||||||||| |    
T  4219663 ggcttaattacacttttgatcctcgtgttttgggctatttacaaaaatggtcatgcctttttaaaacagaacaaagttgtcctttagttatcatttttgt 4219762  T
Q  167 tgcatttttcgtcctgccccccattttattctccaaaaa 205  Q
    |||||||||||||||  |||||||||||| |||||||||    
T  4219763 tgcatttttcgtcct-acccccattttatcctccaaaaa 4219800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 80 - 206
Target Start/End: Complemental strand, 4624757 - 4624631
Alignment:
Q  80 ttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattgcatttttcgtc 179  Q
    |||| |||||||||||||  ||||||||||||||||||| || |  ||||||||| ||||||||  || |||||||||||||| | ||||||||||||||    
T  4624757 ttttcgtcctcgtgttttaacctactcacgaaattggtcatgtctctttaaaacataacaaaactatcattcaattatcatttatgttgcatttttcgtc 4624658  T
Q  180 ctgccccccattttattctccaaaaac 206  Q
    || ||||||||||||| || |||||||    
T  4624657 ctaccccccattttatccttcaaaaac 4624631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 73 - 205
Target Start/End: Complemental strand, 6019309 - 6019177
Alignment:
Q  73 attacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattgca-t 171  Q
    |||||| |||||||| || ||||||||| ||||||||||| || || ||| |||||||||||||||||||| ||| || ||||||||||||| ||||| |    
T  6019309 attacatttttggtcatcatgttttggc-tactcacgaaactgatcttgctcttttaaaacagaacaaaactgtcttttaattatcatttttgttgcatt 6019211  T
Q  172 ttttcgtcctgccccccattttattctccaaaaa 205  Q
    |||||||||| || |||||||||| |||||||||    
T  6019210 ttttcgtcctacctcccattttatcctccaaaaa 6019177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 8 - 66
Target Start/End: Original strand, 5501689 - 5501747
Alignment:
Q  8 gagttgtctaagatggagcaattaccgcagagattaatgctatagagtggtaattataa 66  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  5501689 gagttgtctaagatggagcaattaccgctgagattaatgctatagagtggtaattataa 5501747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 68 - 206
Target Start/End: Original strand, 6018315 - 6018452
Alignment:
Q  68 gcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttatt 167  Q
    ||||||||||| ||||||| |||||||||||  |||||||||||| ||||| || ||||||||||||||||||||   | ||||||||||||||||| ||    
T  6018315 gcttaattacatttttggttctcgtgttttgttctactcacgaaactggtcatgtccttttaaaacagaacaaaattat-cttcaattatcatttttgtt 6018413  T
Q  168 gcatttttcgtcctgccccccattttattctccaaaaac 206  Q
    ||| |||| ||||| ||| | |||||   ||||||||||    
T  6018414 gcagttttagtcctaccctctattttcacctccaaaaac 6018452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 118 - 207
Target Start/End: Complemental strand, 13814226 - 13814133
Alignment:
Q  118 cctgcccttttaaaacagaacaaaacggtcct-----tcaattatcatttttattgcatttttcgtcctgccccccattttattctccaaaaacg 207  Q
    |||||||||||||| ||||||||||| ||| |     ||||||||||||||| ||||| ||||||||||  |||||||||||| |||||||||||    
T  13814226 cctgcccttttaaatcagaacaaaactgtcatgtctttcaattatcatttttgttgcacttttcgtcct-acccccattttatcctccaaaaacg 13814133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 65 - 229
Target Start/End: Complemental strand, 41834607 - 41834443
Alignment:
Q  65 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcat-ttt 163  Q
    |||||||||||||||||||||||||||  ||||| ||  ||||||||| ||||||||||  ||| | |  ||||||||| |||| | || |||||| |||    
T  41834607 aaggcttaattacacttttggtcctcgcattttgaccagctcacgaaaatggtcctgcctctttcagatcgaacaaaaccgtcc-taaactatcatgttt 41834509  T
Q  164 tattgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagac 229  Q
    | ||||| |||| ||||| || || |||||   |||   ||||| |||||||||||||||||||||    
T  41834508 ttttgcagttttagtcctacctcctattttcaactcttgaaacgcagagaaatgacagttttagac 41834443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 68 - 227
Target Start/End: Original strand, 10721787 - 10721945
Alignment:
Q  68 gcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttatt 167  Q
    ||||||||||| |||||||||||   ||||| ||  ||||||||| ||||| || |  ||| |||  ||||||||  |||||  || |||||| ||| ||    
T  10721787 gcttaattacatttttggtcctcacattttgaccagctcacgaaaatggtcttgtctctttcaaatcgaacaaaatcgtccta-aactatcatgtttttt 10721885  T
Q  168 gcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttag 227  Q
    ||| |||| ||||| || || |||||   ||||| |||||||||||||||||||||||||    
T  10721886 gcagttttagtcctacctcctattttcaactccagaaacgtagagaaatgacagttttag 10721945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 227
Target Start/End: Complemental strand, 14340823 - 14340793
Alignment:
Q  197 ctccaaaaacgtagagaaatgacagttttag 227  Q
    |||||||||||||||||||||||||||||||    
T  14340823 ctccaaaaacgtagagaaatgacagttttag 14340793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 227
Target Start/End: Original strand, 14462686 - 14462769
Alignment:
Q  149 ttcaattatcatttttattgcatttttcgtcctgccccccatttt-attctc----caaaaacgtagagaaatgacagttttag 227  Q
    |||||||||||||||| |||||||||||||||| || || ||||| |  |||    || |||||||||||||||||||||||||    
T  14462686 ttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaactccagacagaaacgtagagaaatgacagttttag 14462769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 118
Target Start/End: Complemental strand, 15029856 - 15029804
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtc 118  Q
    |||||||||||||||||||||||||   ||||| || |||||||||| |||||    
T  15029856 aggcttaattacacttttggtcctcccattttgaccaactcacgaaaatggtc 15029804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 142
Target Start/End: Complemental strand, 22651858 - 22651782
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaa 142  Q
    |||||||||||||||||| |||||||  ||||| ||  ||||||||| |||| ||||| |||| |||  ||||||||    
T  22651858 aggcttaattacactttttgtcctcgcattttgaccagctcacgaaaatggttctgcctttttcaaatcgaacaaaa 22651782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 120
Target Start/End: Complemental strand, 32697771 - 32697719
Alignment:
Q  68 gcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcct 120  Q
    |||||||||||||||||||| | |  ||||| || ||||||||||||||||||    
T  32697771 gcttaattacacttttggtcattgcattttgaccaactcacgaaattggtcct 32697719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 151; Significance: 5e-80; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 65 - 235
Target Start/End: Complemental strand, 50970825 - 50970655
Alignment:
Q  65 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 164  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50970825 aaggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 50970726  T
Q  165 attgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccc 235  Q
     |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  50970725 gttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 50970655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 65 - 235
Target Start/End: Complemental strand, 5540365 - 5540195
Alignment:
Q  65 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 164  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| ||||||||||||||||||||||||||    
T  5540365 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgtccttttaaaacagaagaaaacggtccttcaattatcattttt 5540266  T
Q  165 attgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccc 235  Q
     |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  5540265 gttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 5540195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 64 - 235
Target Start/End: Complemental strand, 15646743 - 15646572
Alignment:
Q  64 taaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| || |||| ||||||||||||||||||||||||||||||||||||||||||    
T  15646743 taaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctacccttttaaaacagaacaaaacggtccttcaattatcatttt 15646644  T
Q  164 tattgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccc 235  Q
    | |||||||||||||||| ||||| ||||||||||||||||||| |||||||||||||||||||||||||||    
T  15646643 tgttgcatttttcgtcctacccccaattttattctccaaaaacgcagagaaatgacagttttagacctaccc 15646572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 66 - 232
Target Start/End: Original strand, 18984118 - 18984284
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 165  Q
    |||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||     
T  18984118 aggcttaattacacttttggtcctcgtgttttggtctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 18984217  T
Q  166 ttgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagaccta 232  Q
    |||||||||||||||| ||||||||||||||||||||||||| |||||||||| |||||||||||||    
T  18984218 ttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgatagttttagaccta 18984284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 67 - 235
Target Start/End: Original strand, 29306953 - 29307121
Alignment:
Q  67 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttat 166  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| ||||| || |||||||||||||||||||||||||||||||||||||||||| |    
T  29306953 ggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcatgtccttttaaaacagaacaaaacggtccttcaattatcatttttgt 29307052  T
Q  167 tgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccc 235  Q
    ||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  29307053 tgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 29307121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 63 - 235
Target Start/End: Original strand, 29869616 - 29869788
Alignment:
Q  63 ataaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 162  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||    
T  29869616 ataaggcttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattattattt 29869715  T
Q  163 ttattgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccc 235  Q
    || |||||||||||||||| | ||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  29869716 ttgttgcatttttcgtcctacaccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 29869788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 69 - 235
Target Start/End: Complemental strand, 33144462 - 33144296
Alignment:
Q  69 cttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattg 168  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||||| |||||||||| |||    
T  33144462 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggaccttcaaatatcatttttgttg 33144363  T
Q  169 catttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccc 235  Q
    ||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  33144362 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 33144296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 61 - 235
Target Start/End: Original strand, 15173090 - 15173264
Alignment:
Q  61 ttataaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcat 160  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||  |||||||||||| |||||||||||||    
T  15173090 ttatcaggtttaattacacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaattgaacaaaacggttcttcaattatcat 15173189  T
Q  161 ttttattgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccc 235  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  15173190 ttttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 15173264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 64 - 235
Target Start/End: Complemental strand, 5963126 - 5962955
Alignment:
Q  64 taaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 163  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||| |||||||||| ||| |||||||||||||||    
T  5963126 taaggtttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaatagaacaaaacagtctttcaattatcatttt 5963027  T
Q  164 tattgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccc 235  Q
    | |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  5963026 tgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 5962955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 67 - 235
Target Start/End: Complemental strand, 21856588 - 21856420
Alignment:
Q  67 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttat 166  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| || ||||||| ||||||||||||||||||||||||||||| ||||||||||      
T  21856588 ggcttaattacacttttggtcctcgtgttttggcctactcatgaaactgatcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgc 21856489  T
Q  167 tgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccc 235  Q
    ||||||||||||||| | ||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  21856488 tgcatttttcgtcctactccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 21856420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 67 - 235
Target Start/End: Complemental strand, 8679086 - 8678919
Alignment:
Q  67 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttat 166  Q
    ||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| |||| |||||||||||||||| |    
T  8679086 ggcttaattacacttttggtcctcgtgttttggcctactcacggaactggtcctgcccttttaaaacagaacaaaaaggtcattcaattatcatttttgt 8678987  T
Q  167 tgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccc 235  Q
    |||||||||||||||  || ||||||||||||||||||| | |||||||||||||||||||||||||||    
T  8678986 tgcatttttcgtcct-acctccattttattctccaaaaatgcagagaaatgacagttttagacctaccc 8678919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 66 - 235
Target Start/End: Original strand, 9018972 - 9019141
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 165  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| |||| ||||||||||||||||||||||||||||| ||||| ||||||||||     
T  9018972 aggcttaattacacttttggtcctcgtgttttggcctactaacgaaactggttctgcccttttaaaacagaacaaaacggtcattcaactatcatttttg 9019071  T
Q  166 ttgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccc 235  Q
    |||||||||||||||| ||||||||||||||||||||||||| |||||||| | | ||||||| ||||||    
T  9019072 ttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaattatatttttagatctaccc 9019141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 67 - 232
Target Start/End: Original strand, 17433216 - 17433381
Alignment:
Q  67 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttat 166  Q
    |||||||||||||||||||||||| |||||||||||||||| |||| ||  | |||||||||||||||||||||||||||||||||| |||||||||| |    
T  17433216 ggcttaattacacttttggtcctcatgttttggcctactcatgaaactgaccatgcccttttaaaacagaacaaaacggtccttcaagtatcatttttgt 17433315  T
Q  167 tgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagaccta 232  Q
    |||||||||| |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  17433316 tgcatttttcatcctaccccccattttattctccaaaaacgcagagaaatgacagttttagaccta 17433381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 67 - 235
Target Start/End: Complemental strand, 29307487 - 29307318
Alignment:
Q  67 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttat 166  Q
    ||||||||| |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  29307487 ggcttaattgcacttttggtcctcgtgttttgacctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 29307388  T
Q  167 tgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttagacctaccc 235  Q
    ||||||||||||||| || || ||||| |  ||||| ||||| |||||||||||||||||||||||||||    
T  29307387 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttagacctaccc 29307318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 66 - 234
Target Start/End: Complemental strand, 26859605 - 26859438
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 165  Q
    ||||||||||||||||||| |||||||||||||| |||||||||||| |  |||||||||||||||||||||||| |||||||||||||||||||||||     
T  26859605 aggcttaattacacttttgatcctcgtgttttgggctactcacgaaactaatcctgcccttttaaaacagaacaatacggtccttcaattatcatttttg 26859506  T
Q  166 ttgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctacc 234  Q
    |||||||||||||||| ||||||| ||||||||||||||||| |||||||| | |||||||||||||||    
T  26859505 ttgcatttttcgtcctacccccca-tttattctccaaaaacgcagagaaataatagttttagacctacc 26859438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 69 - 230
Target Start/End: Original strand, 39154021 - 39154182
Alignment:
Q  69 cttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattg 168  Q
    ||||||||||||||||||| || ||||||||| ||||||||||| || || |||||||||||||||||||||||||||||| |||||||||||||| |||    
T  39154021 cttaattacacttttggtcatcatgttttggcatactcacgaaactgatcatgcccttttaaaacagaacaaaacggtcctgcaattatcatttttgttg 39154120  T
Q  169 catttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacc 230  Q
    ||||||||||||| ||||||||| ||||||||||||||| | ||||||||||||||||||||    
T  39154121 catttttcgtcctaccccccattctattctccaaaaacgcatagaaatgacagttttagacc 39154182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 64 - 181
Target Start/End: Complemental strand, 18984667 - 18984550
Alignment:
Q  64 taaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 163  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18984667 taaggcttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 18984568  T
Q  164 tattgcatttttcgtcct 181  Q
    | ||||||||||||||||    
T  18984567 tgttgcatttttcgtcct 18984550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 68 - 227
Target Start/End: Original strand, 5539817 - 5539977
Alignment:
Q  68 gcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttatt 167  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  5539817 gcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgtt 5539916  T
Q  168 gcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 227  Q
    | |||||||||||| || || ||||| |  ||||| ||||| | ||||||| |||||||||    
T  5539917 gtatttttcgtcctacctcctattttcaaactccataaacgcatagaaatggcagttttag 5539977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 69 - 229
Target Start/End: Complemental strand, 17433758 - 17433597
Alignment:
Q  69 cttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattg 168  Q
    ||||||||||||||||||||||||||| |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||    
T  17433758 cttaattacacttttggtcctcgtgttctggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 17433659  T
Q  169 catttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttagac 229  Q
    ||||||||||||| || || ||||| |  || || ||||| |||||||||||||||||||||    
T  17433658 catttttcgtcctacctcctattttcaaacttcagaaacgcagagaaatgacagttttagac 17433597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 66 - 225
Target Start/End: Original strand, 50970277 - 50970437
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| ||||||||||||||||||||||||||||||||     
T  50970277 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaatcagaacaaaacggtccttcaattatcatttttg 50970376  T
Q  166 ttgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagtttt 225  Q
    |||||||||||||||| ||  | ||||| |  ||||| ||||| |||||||||||||||||    
T  50970377 ttgcatttttcgtcctaccttctattttcaaactccagaaacgcagagaaatgacagtttt 50970437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 64 - 207
Target Start/End: Original strand, 52268287 - 52268430
Alignment:
Q  64 taaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 163  Q
    ||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||| ||| |||| ||||||||||    
T  52268287 taaggcttaattacacttttggtcctcgtattttggcctgctcacgaaattggtcctgcccttttaaaacagaacaaaactgtcattcagttatcatttt 52268386  T
Q  164 tattgcatttttcgtcctgccccccattttattctccaaaaacg 207  Q
    | ||||| |||||||||| ||||||||||| | |||||||||||    
T  52268387 tgttgcacttttcgtcctaccccccattttttcctccaaaaacg 52268430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 65 - 227
Target Start/End: Original strand, 33143913 - 33144078
Alignment:
Q  65 aaggcttaatta--cacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 162  Q
    ||||||||||||  |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  33143913 aaggcttaattatacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 33144012  T
Q  163 ttattgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 227  Q
    || |||||| ||||||||| || || ||||| |  ||| | ||||| |||||||||||||||||||    
T  33144013 tttttgcatatttcgtcctacctcctattttcaaactctagaaacgcagagaaatgacagttttag 33144078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 68 - 181
Target Start/End: Original strand, 8678542 - 8678655
Alignment:
Q  68 gcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttatt 167  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||    
T  8678542 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacaaaacaaaacggtccttcaattatcatttttgtt 8678641  T
Q  168 gcatttttcgtcct 181  Q
    ||||||||||||||    
T  8678642 gcatttttcgtcct 8678655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 67 - 227
Target Start/End: Complemental strand, 29870164 - 29870003
Alignment:
Q  67 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttat 166  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| |||||||||||||||||||||||||||||||||||||||| |    
T  29870164 ggcttaattacacttttggtcctcgtgttttggcctactcatgaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcatttttgt 29870065  T
Q  167 tgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 227  Q
    ||||||||||||||| || || ||||| |  ||  | ||||| |||||||||||||||||||    
T  29870064 tgcatttttcgtcctacctcctattttcaaactttagaaacgcagagaaatgacagttttag 29870003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 68 - 226
Target Start/End: Complemental strand, 4636515 - 4636356
Alignment:
Q  68 gcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttatt 167  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||| ||||||||||||||||||| ||    
T  4636515 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacgatccttcaattatcatttttgtt 4636416  T
Q  168 gcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagtttta 226  Q
    |||||||||||||  || || ||||| |  ||||| ||||| |||||||||||| |||||    
T  4636415 gcatttttcgtcccacctcctattttcaaactccagaaacgcagagaaatgacaatttta 4636356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 69 - 227
Target Start/End: Original strand, 21856044 - 21856203
Alignment:
Q  69 cttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattg 168  Q
    ||||||||||||||||||||||||||||||  |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  21856044 cttaattacacttttggtcctcgtgttttgatctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 21856143  T
Q  169 catttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 227  Q
    |||||||| ||||  | || ||||| |  ||||| ||||| |||||||||||||||||||    
T  21856144 catttttcatcctagctcctattttcaaactccagaaacgcagagaaatgacagttttag 21856203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 65 - 227
Target Start/End: Complemental strand, 39154567 - 39154404
Alignment:
Q  65 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 164  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||| |||||||||||||||||||||    
T  39154567 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacataacaaaatggtccttcaattatcattttt 39154468  T
Q  165 attgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 227  Q
     |||||||||||||||| || || ||||| |  || || ||||| |||||||||||| ||||||    
T  39154467 gttgcatttttcgtcctacctcctattttcaaacttcagaaacgcagagaaatgacaattttag 39154404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 66 - 227
Target Start/End: Complemental strand, 15173639 - 15173478
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 165  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||||||||| |||||||||||||||||||||     
T  15173639 aggcttaattacacttttggtcctcgtgttttggcctactcacaaaactggtcctgcc-ttttaaaacagaacaaaatggtccttcaattatcatttttg 15173541  T
Q  166 ttgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 227  Q
    |||||||||||||||| || || ||||| |  ||| | ||||| |||||||||||||||||||    
T  15173540 ttgcatttttcgtcctacctcctattttcaaactctataaacgcagagaaatgacagttttag 15173478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 66 - 231
Target Start/End: Complemental strand, 9019509 - 9019343
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 165  Q
    ||||||||||||||||||||||||||||||||| ||||||||| ||| |||| ||||| ||||||||||||||||||||||| ||||||||||||||||     
T  9019509 aggcttaattacacttttggtcctcgtgttttgacctactcacaaaactggttctgccattttaaaacagaacaaaacggtcattcaattatcatttttg 9019410  T
Q  166 ttgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttagacct 231  Q
    |||||||||||||||| || || ||||| |  | ||| ||||| |||||||| ||||||||||||||    
T  9019409 ttgcatttttcgtcctacctcctattttcaaaccccagaaacgcagagaaataacagttttagacct 9019343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 66 - 227
Target Start/End: Original strand, 15646191 - 15646353
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 165  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||| |||||||||||||||||     
T  15646191 aggcttaattatacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaatggtacttcaattatcatttttg 15646290  T
Q  166 ttgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 227  Q
    |||||||||||||||| || |  ||||| |  ||||| ||| | |||||||||||||||||||    
T  15646291 ttgcatttttcgtcctacctcatattttcaaactccataaatgcagagaaatgacagttttag 15646353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 67 - 181
Target Start/End: Original strand, 26859059 - 26859173
Alignment:
Q  67 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttat 166  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||| |||||||||| |||||||||||||||||||||||||||||||||||||||| |    
T  26859059 ggcttaattacacttttggtccttgtgttttggcctactaacgaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcatttttgt 26859158  T
Q  167 tgcatttttcgtcct 181  Q
    |||||||||||||||    
T  26859159 tgcatttttcgtcct 26859173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 68 - 227
Target Start/End: Original strand, 5962579 - 5962739
Alignment:
Q  68 gcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttatt 167  Q
    ||||||||||| |||||||||||||||| ||| ||| |||||||| |||||| ||||||||||||||||||||||||||| ||||| |||||||||| ||    
T  5962579 gcttaattacatttttggtcctcgtgttatggtctattcacgaaactggtccggcccttttaaaacagaacaaaacggtctttcaactatcatttttgtt 5962678  T
Q  168 gcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 227  Q
    ||||||||||| || || || ||||| |  ||||| ||||  |||| ||||||||||||||    
T  5962679 gcatttttcgttctacctcctattttcaaactccagaaacacagagtaatgacagttttag 5962739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 127 - 235
Target Start/End: Original strand, 4636033 - 4636140
Alignment:
Q  127 ttaaaacagaacaaaacggtccttcaattatcatttttattgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagtttta 226  Q
    ||||||||||||||| ||||||||||| |||||||||| |||||||||| || || |||||||||||||||| |||||||| ||||||||||||||||||    
T  4636033 ttaaaacagaacaaa-cggtccttcaagtatcatttttgttgcattttttgttctaccccccattttattcttcaaaaacgcagagaaatgacagtttta 4636131  T
Q  227 gacctaccc 235  Q
    |||||||||    
T  4636132 gacctaccc 4636140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 66 - 153
Target Start/End: Complemental strand, 2733503 - 2733416
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaa 153  Q
    ||||||||||| |||||||||||| ||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  2733503 aggcttaattatacttttggtccttgtgttttggcctattcgcgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaa 2733416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 69 - 181
Target Start/End: Complemental strand, 52269291 - 52269179
Alignment:
Q  69 cttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattg 168  Q
    |||||||||||||||||||||||||||||| | |||||| ||||| ||| ||||||||||||||||||||||||  ||| |||| ||||||||||| |||    
T  52269291 cttaattacacttttggtcctcgtgttttgacttactcatgaaatcggttctgcccttttaaaacagaacaaaaatgtcattcagttatcatttttgttg 52269192  T
Q  169 catttttcgtcct 181  Q
    || ||||||||||    
T  52269191 cacttttcgtcct 52269179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 67 - 227
Target Start/End: Original strand, 17112282 - 17112442
Alignment:
Q  67 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttat 166  Q
    |||||||||||||||||||| ||| |||||||  ||||||| |||||||||   |||||||||||| |||| ||||  ||||||||||||||||||||||    
T  17112282 ggcttaattacacttttggttctcatgttttgatctactcatgaaattggtag-gcccttttaaaatagaataaaatagtccttcaattatcatttttat 17112380  T
Q  167 tgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 227  Q
    ||||||||||||||| || || ||||| |  ||||| ||||| ||| |||||| ||||||||    
T  17112381 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagaaaaatgatagttttag 17112442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 69 - 142
Target Start/End: Original strand, 47826966 - 47827039
Alignment:
Q  69 cttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaa 142  Q
    ||||||||||||||||||||||||||||||| |||||||||||| ||||| ||||||||||||| | |||||||    
T  47826966 cttaattacacttttggtcctcgtgttttggtctactcacgaaaatggtcatgcccttttaaaatataacaaaa 47827039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 75 - 164
Target Start/End: Complemental strand, 47827125 - 47827036
Alignment:
Q  75 tacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 164  Q
    |||||||||| ||  | ||||||||||||||||||||| ||||| |||||||||||||||||||||||  |||||| |||||||||||||    
T  47827125 tacacttttgatctccttgttttggcctactcacgaaaatggtcatgcccttttaaaacagaacaaaattgtcctttaattatcattttt 47827036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 67 - 148
Target Start/End: Complemental strand, 50419806 - 50419725
Alignment:
Q  67 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtcc 148  Q
    ||||||||| ||||||||||| |||  ||| | || ||||||||||||||||||||| ||||||||  ||||||||||||||    
T  50419806 ggcttaattgcacttttggtcatcgcatttagaccaactcacgaaattggtcctgcctttttaaaattgaacaaaacggtcc 50419725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 65 - 120
Target Start/End: Original strand, 29438928 - 29438983
Alignment:
Q  65 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcct 120  Q
    ||||||||||||||||||||||||| |  ||||| || ||||||||||||||||||    
T  29438928 aaggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcct 29438983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 128
Target Start/End: Complemental strand, 39843573 - 39843509
Alignment:
Q  64 taaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgccctttt 128  Q
    |||||||| |||||||||| ||||||||  ||| | || ||||||||||||||||||||| ||||    
T  39843573 taaggctttattacactttcggtcctcgcatttagaccaactcacgaaattggtcctgccttttt 39843509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 66 - 229
Target Start/End: Complemental strand, 44802718 - 44802555
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 165  Q
    |||||||||||||||||||||||| |  ||||| ||  ||||||||| ||||| ||||  ||| |||| ||||||||  |||| | || |||||| |||     
T  44802718 aggcttaattacacttttggtccttgcattttgaccagctcacgaaagtggtcatgcctctttcaaacggaacaaaatcgtccctaaactatcatgtttt 44802619  T
Q  166 ttgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagac 229  Q
    ||||| |||| || || || || |||||   ||||| ||||  ||| |||||||| ||||||||    
T  44802618 ttgcagttttagttctacctcctattttcaactccagaaacacagaaaaatgacaattttagac 44802555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 128
Target Start/End: Original strand, 52233737 - 52233799
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgccctttt 128  Q
    |||||||||||||||||| ||||||| |||||  || ||| ||||||||||| || |||||||    
T  52233737 aggcttaattacacttttcgtcctcgggttttaaccaacttacgaaattggtgctaccctttt 52233799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 208
Target Start/End: Complemental strand, 52235215 - 52235073
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 165  Q
    ||||||||||||||||||| |||||   ||||  || |||||||||| || |||||||||||| |||  |||| || | |||| |  | |||||| |||     
T  52235215 aggcttaattacacttttgatcctcagattttaaccaactcacgaaactgatcctgcccttttcaaatcgaacgaagcagtccctatactatcatgtttc 52235116  T
Q  166 ttgcatttttcgtcctgccccccattttattctccaaaaacgt 208  Q
    ||||| |||| |||||  ||| |||||||  ||||||||||||    
T  52235115 ttgcaattttggtcctaaccctcattttaccctccaaaaacgt 52235073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 118
Target Start/End: Original strand, 50304441 - 50304490
Alignment:
Q  69 cttaattacacttttggtcctcgtgttttggcctactcacgaaattggtc 118  Q
    |||||||||||||||||||||||  ||||| || |||||||||| |||||    
T  50304441 cttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtc 50304490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 235
Target Start/End: Complemental strand, 17088550 - 17088518
Alignment:
Q  203 aaacgtagagaaatgacagttttagacctaccc 235  Q
    ||||| |||||||||||||||||||||||||||    
T  17088550 aaacgcagagaaatgacagttttagacctaccc 17088518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 118
Target Start/End: Complemental strand, 17641912 - 17641864
Alignment:
Q  70 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtc 118  Q
    ||||||||||||||||||||||  ||||| || |||||||||| |||||    
T  17641912 ttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtc 17641864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 147; Significance: 1e-77; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 65 - 235
Target Start/End: Original strand, 37786765 - 37786935
Alignment:
Q  65 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 164  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  37786765 aaggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacataacaaaacggtccttcaattatcattttt 37786864  T
Q  165 attgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccc 235  Q
     |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  37786865 gttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 37786935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 70 - 235
Target Start/End: Original strand, 19830423 - 19830588
Alignment:
Q  70 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattgc 169  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  19830423 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 19830522  T
Q  170 atttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccc 235  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  19830523 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 19830588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 67 - 235
Target Start/End: Original strand, 19590525 - 19590693
Alignment:
Q  67 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttat 166  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  19590525 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 19590624  T
Q  167 tgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccc 235  Q
    |||||||||| |||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  19590625 tgcatttttcatcctaccccccattttattctccaaaaacccagagaaatgacagttttagacctaccc 19590693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 65 - 235
Target Start/End: Complemental strand, 29100398 - 29100228
Alignment:
Q  65 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 164  Q
    |||| |||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  29100398 aaggtttaattacacttttggtcctcgtgttttggtctactcacaaaattggtcctgcccttttaaaacagaacaaaacggtctttcaattatcattttt 29100299  T
Q  165 attgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccc 235  Q
     |||||||||| ||||| ||||||||||||||||||||||||| |||||||| ||||||||||||||||||    
T  29100298 gttgcattttttgtcctaccccccattttattctccaaaaacgcagagaaataacagttttagacctaccc 29100228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 65 - 235
Target Start/End: Original strand, 38858641 - 38858811
Alignment:
Q  65 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 164  Q
    |||||||||| ||||||||||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  38858641 aaggcttaataacacttttggtcctcgtgttttggcatactcacgaaactggtcctgctcttttaaaacagaacaaaacggtcattcaattatcattttt 38858740  T
Q  165 attgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccc 235  Q
     |||||||||| ||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  38858741 gttgcatttttggtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 38858811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 66 - 235
Target Start/End: Complemental strand, 35289447 - 35289278
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 165  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||      
T  35289447 aggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttgg 35289348  T
Q  166 ttgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccc 235  Q
    |||||||||||||| | ||||||||||||||||| ||||||| |||||||| | ||||||||||||||||    
T  35289347 ttgcatttttcgtcataccccccattttattctctaaaaacgcagagaaataatagttttagacctaccc 35289278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 67 - 235
Target Start/End: Complemental strand, 32005159 - 32004991
Alignment:
Q  67 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttat 166  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||| ||||| ||||||||||||| ||||||||||||||||| ||||||||||||| |    
T  32005159 ggcttaattacacttttggtcctcatgttttggcatactcacgaaactggtcatgcccttttaaaatagaacaaaacggtcctttaattatcatttttgt 32005060  T
Q  167 tgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccc 235  Q
    ||||||||||||||| | ||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  32005059 tgcatttttcgtcctactccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 32004991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 66 - 234
Target Start/End: Complemental strand, 34534337 - 34534169
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 165  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||||| || |||||||| |||||||||||||||||||||||||||||||||||||||     
T  34534337 aggcttaattatacttttggttctcgtgttttggcctactcacgaaactgatcctgcccatttaaaacagaacaaaacggtccttcaattatcatttttg 34534238  T
Q  166 ttgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctacc 234  Q
    |||||||||||||||| |||||||||||||||||||||||   ||||||||||||||||||||||||||    
T  34534237 ttgcatttttcgtcctaccccccattttattctccaaaaaaacagagaaatgacagttttagacctacc 34534169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 66 - 235
Target Start/End: Complemental strand, 2659386 - 2659217
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 165  Q
    ||||||||||||| |||||||||||| ||||||||||| ||| |||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||     
T  2659386 aggcttaattacaattttggtcctcgcgttttggcctattcatgaaactggtcttgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 2659287  T
Q  166 ttgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccc 235  Q
    ||||||||||| |||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  2659286 ttgcatttttcatcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 2659217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 65 - 231
Target Start/End: Original strand, 4641438 - 4641604
Alignment:
Q  65 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 164  Q
    |||| ||||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||| ||||| |||||||||||| ||||||||||||||||    
T  4641438 aaggtttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgctcttttgaaacataacaaaacggtcattcaattatcattttt 4641537  T
Q  165 attgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacct 231  Q
     |||||||||||||||| ||||||||||||||||||||||| | |||||||||| ||||||||||||    
T  4641538 gttgcatttttcgtcctaccccccattttattctccaaaaatgcagagaaatgatagttttagacct 4641604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 66 - 227
Target Start/End: Complemental strand, 19591071 - 19590909
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 165  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||     
T  19591071 aggcttaattacacttttggtactcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 19590972  T
Q  166 ttgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 227  Q
    |||||||||||||||| || || ||||| |  ||||| ||||| |||||||||||||||||||    
T  19590971 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 19590909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 73 - 235
Target Start/End: Complemental strand, 23953268 - 23953106
Alignment:
Q  73 attacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattgcatt 172  Q
    |||||| |||||||||||||||||||  |||||||||||| |||||| ||||||| |||||||||||||||||||||||||||||||||||| |||||||    
T  23953268 attacatttttggtcctcgtgttttgatctactcacgaaactggtcccgccctttcaaaacagaacaaaacggtccttcaattatcatttttgttgcatt 23953169  T
Q  173 tttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccc 235  Q
    ||||||| | ||||||||||||||||||||||||| |||||||| |||||||||||| |||||    
T  23953168 tttcgtcataccccccattttattctccaaaaacgcagagaaataacagttttagacataccc 23953106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 66 - 227
Target Start/End: Complemental strand, 38859187 - 38859025
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 165  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||     
T  38859187 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttccattatcatttttg 38859088  T
Q  166 ttgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 227  Q
    |||||||||||||||| || || ||||| |  ||||| ||||| |||||||||| ||||||||    
T  38859087 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgatagttttag 38859025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 70 - 235
Target Start/End: Complemental strand, 4478242 - 4478077
Alignment:
Q  70 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattgc 169  Q
    |||| |||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| || |  |||||||||||||||||||| ||||    
T  4478242 ttaagtacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaataacattgtccttcaattatcatttttgttgc 4478143  T
Q  170 atttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccc 235  Q
    |||||||||| |  ||| |||||||||||||||||||| |||||||| ||||||||||||||||||    
T  4478142 atttttcgtcttatccctcattttattctccaaaaacgcagagaaataacagttttagacctaccc 4478077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 66 - 226
Target Start/End: Original strand, 32004613 - 32004774
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 165  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||     
T  32004613 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattgatcctgcccttttaaaacagaacaaaatggtccttcaattatcatttttg 32004712  T
Q  166 ttgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagtttta 226  Q
    |||||||||||| ||| || || ||||| |  ||||| ||||| ||||||||||||||||||    
T  32004713 ttgcatttttcgccctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 32004774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 66 - 205
Target Start/End: Original strand, 28583438 - 28583577
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 165  Q
    |||||||||||||||||||||||||||||||||||||||||| || |||||| |||||||||||||||| || ||||| |||||||||||||||||||||    
T  28583438 aggcttaattacacttttggtcctcgtgttttggcctactcatgagattggttctgcccttttaaaacataataaaactgtccttcaattatcattttta 28583537  T
Q  166 ttgcatttttcgtcctgccccccattttattctccaaaaa 205  Q
    |||||||||||||||| ||||||||||||| |||||||||    
T  28583538 ttgcatttttcgtcctaccccccattttatcctccaaaaa 28583577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 66 - 227
Target Start/End: Original strand, 2658838 - 2659000
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 165  Q
    |||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| |||||||||||||||||||||     
T  2658838 aggcttaattacactttttgtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttg 2658937  T
Q  166 ttgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 227  Q
    |||||||||||||| | || || ||||| |  ||||||||||| ||||||||| |||||||||    
T  2658938 ttgcatttttcgtcatacctcctattttcaaactccaaaaacgcagagaaatggcagttttag 2659000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 66 - 225
Target Start/End: Complemental strand, 37787313 - 37787153
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 165  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| |||||||| |||||||||||||| |||||||||||||||||     
T  37787313 aggcttaattatacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaatcagaacaaaacggttcttcaattatcatttttg 37787214  T
Q  166 ttgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagtttt 225  Q
    |||||||||||||||| || || ||||| |  ||||| ||||| |||||||||||||||||    
T  37787213 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttt 37787153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 66 - 207
Target Start/End: Original strand, 38160950 - 38161091
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 165  Q
    |||||||||||||||||||||||||| |||||||||||||||||||| |  ||||||||||||||||||||||||||  ||||||||||||| ||||||     
T  38160950 aggcttaattacacttttggtcctcgggttttggcctactcacgaaaataatcctgcccttttaaaacagaacaaaattgtccttcaattattatttttg 38161049  T
Q  166 ttgcatttttcgtcctgccccccattttattctccaaaaacg 207  Q
    |||||||||||||||| | ||||||||||| |||||||||||    
T  38161050 ttgcatttttcgtcctactccccattttatcctccaaaaacg 38161091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 80 - 227
Target Start/End: Original strand, 29099863 - 29100011
Alignment:
Q  80 ttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattgcatttttcgtc 179  Q
    ||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  29099863 ttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtc 29099962  T
Q  180 ctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 227  Q
    || || || ||||| |  | ||| ||||||||| |||||||||||||||    
T  29099963 ctacctcctattttcaaaccccagaaacgtagataaatgacagttttag 29100011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 66 - 227
Target Start/End: Original strand, 34533790 - 34533952
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| |||||||||||||| |||| |||| ||||||||||||||||     
T  34533790 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgctcttttaaaacagaataaaatggtcattcaattatcatttttg 34533889  T
Q  166 ttgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 227  Q
    ||||||||| |||||| || || ||||| |  ||||||||||| |||||||||||| ||||||    
T  34533890 ttgcattttccgtcctacctcctattttcaaactccaaaaacgcagagaaatgacacttttag 34533952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 67 - 181
Target Start/End: Original strand, 35288903 - 35289017
Alignment:
Q  67 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttat 166  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| |    
T  35288903 ggcttaattacacttttggtcatcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaattatcatttttgt 35289002  T
Q  167 tgcatttttcgtcct 181  Q
    |||||||||||||||    
T  35289003 tgcatttttcgtcct 35289017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 61 - 181
Target Start/End: Original strand, 23952724 - 23952845
Alignment:
Q  61 ttataaggcttaattacacttttggtcctcgtgttttggcc-tactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatca 159  Q
    |||| ||||||||||||||||||||||||||||||||| || ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  23952724 ttattaggcttaattacacttttggtcctcgtgttttgaccctactcacgaaattggtcatgcccttttaaaacagaacaaaacggtccttcaattatca 23952823  T
Q  160 tttttattgcatttttcgtcct 181  Q
    ||||  ||||||||||||||||    
T  23952824 ttttggttgcatttttcgtcct 23952845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 65 - 227
Target Start/End: Complemental strand, 19830966 - 19830804
Alignment:
Q  65 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 164  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||||||| ||||||||||| |||||||||||||||||    
T  19830966 aaggcttaattacacttttggtcctcgtgttttggcctactcacaaaactggtcctgtccttttaaaacataacaaaacggtacttcaattatcattttt 19830867  T
Q  165 attgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 227  Q
     |||||||||| ||||| || || ||||| |  ||||| ||||  |||||||||||||||||||    
T  19830866 gttgcattttt-gtcctacctcctattttcaaactccagaaacacagagaaatgacagttttag 19830804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 68 - 207
Target Start/End: Complemental strand, 28584466 - 28584327
Alignment:
Q  68 gcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttatt 167  Q
    |||||||||||||||| ||||||||| ||||||||| |||||||||||||| || ||||||||||||||||||||  |||||||||||||||||||| ||    
T  28584466 gcttaattacacttttcgtcctcgtgctttggcctattcacgaaattggtcatgtccttttaaaacagaacaaaattgtccttcaattatcatttttgtt 28584367  T
Q  168 gcatttttcgtcctgccccccattttattctccaaaaacg 207  Q
    | |||||||||| | ||||||||||||| |||||||||||    
T  28584366 gtatttttcgtcttaccccccattttatcctccaaaaacg 28584327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 70 - 227
Target Start/End: Complemental strand, 4641983 - 4641828
Alignment:
Q  70 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattgc 169  Q
    |||||||||||||||||||||||||||||||||||||||   | |||||||| |||||||||||||||||||||||||||||||||||||||||| ||||    
T  4641983 ttaattacacttttggtcctcgtgttttggcctactcac---actggtcctgtccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 4641887  T
Q  170 atttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 227  Q
    || ||||||||| |  || ||||| |  ||| | ||||| |||||||||||||||||||    
T  4641886 atatttcgtcctacgtcctattttcaaactctagaaacgcagagaaatgacagttttag 4641828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 65 - 131
Target Start/End: Complemental strand, 39137081 - 39137014
Alignment:
Q  65 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcc-cttttaaa 131  Q
    |||||||||||||||||||| ||||||| ||||| ||  ||||||||| |||||||||| ||||||||    
T  39137081 aaggcttaattacacttttgatcctcgtattttgacccgctcacgaaaatggtcctgcctcttttaaa 39137014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 64 - 122
Target Start/End: Complemental strand, 34595321 - 34595263
Alignment:
Q  64 taaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgc 122  Q
    |||||||||||||||||||||||||||   ||||| || |||||||||| |||||||||    
T  34595321 taaggcttaattacacttttggtcctcacattttgaccaactcacgaaaatggtcctgc 34595263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 120
Target Start/End: Complemental strand, 26048492 - 26048439
Alignment:
Q  67 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcct 120  Q
    |||||||||||||||||| |||| | |||||| || ||||||||||||||||||    
T  26048492 ggcttaattacacttttgttccttgcgttttgaccaactcacgaaattggtcct 26048439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 120
Target Start/End: Original strand, 27245203 - 27245256
Alignment:
Q  67 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcct 120  Q
    ||||||||||||||||||||||| |  ||||| || ||||||||||||||||||    
T  27245203 ggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcct 27245256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 65 - 142
Target Start/End: Original strand, 49064032 - 49064109
Alignment:
Q  65 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaa 142  Q
    |||||||||||||||||||||||||||| ||||| ||  ||||||||| ||||  ||||  ||| ||| |||||||||    
T  49064032 aaggcttaattacacttttggtcctcgtattttgaccagctcacgaaaatggtattgcctctttcaaatagaacaaaa 49064109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 117
Target Start/End: Complemental strand, 2758253 - 2758194
Alignment:
Q  58 taattataaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggt 117  Q
    ||||| ||||||||||||||||||||||||||||  |||||  | |||||||||| ||||    
T  2758253 taattttaaggcttaattacacttttggtcctcgcattttgttcaactcacgaaaatggt 2758194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 120
Target Start/End: Complemental strand, 787329 - 787279
Alignment:
Q  70 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcct 120  Q
    ||||||||||||||||| ||||| ||||| || |||||||||| |||||||    
T  787329 ttaattacacttttggtgctcgtattttgaccaactcacgaaaatggtcct 787279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 115
Target Start/End: Complemental strand, 5746192 - 5746138
Alignment:
Q  61 ttataaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattg 115  Q
    ||||||||||||||||||||||||||||| |  ||||| |  |||||||||||||    
T  5746192 ttataaggcttaattacacttttggtccttgcattttgactaactcacgaaattg 5746138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 235
Target Start/End: Complemental strand, 32427432 - 32427398
Alignment:
Q  201 aaaaacgtagagaaatgacagttttagacctaccc 235  Q
    ||||||| |||||||||||||||||||||||||||    
T  32427432 aaaaacgcagagaaatgacagttttagacctaccc 32427398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 120
Target Start/End: Original strand, 48247586 - 48247640
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcct 120  Q
    |||||||||||||||||||||||| |  |||||  | ||||||||||||||||||    
T  48247586 aggcttaattacacttttggtccttgcattttgatcaactcacgaaattggtcct 48247640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 118
Target Start/End: Original strand, 26026320 - 26026368
Alignment:
Q  70 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtc 118  Q
    |||||||||||||||||||| || ||||| ||  |||||||||||||||    
T  26026320 ttaattacacttttggtccttgtattttgaccagctcacgaaattggtc 26026368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 120
Target Start/End: Complemental strand, 39388813 - 39388761
Alignment:
Q  68 gcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcct 120  Q
    |||||||||||||||||||||| |  ||||| || |||||||||||| |||||    
T  39388813 gcttaattacacttttggtccttgcattttgaccaactcacgaaatttgtcct 39388761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295 (Bit Score: 146; Significance: 5e-77; HSPs: 2)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 66 - 235
Target Start/End: Original strand, 4792 - 4961
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||     
T  4792 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 4891  T
Q  166 ttgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccc 235  Q
    |||||||||||||||| ||||||||||||||||||||||||| |||||||| ||||||||||||||||||    
T  4892 ttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaataacagttttagacctaccc 4961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 69 - 181
Target Start/End: Complemental strand, 5334 - 5222
Alignment:
Q  69 cttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattg 168  Q
    ||||||||||||||||||||||||||||||||||| |||||||| ||||| || ||||||||||||||| ||||||||  |||||||||||||||| |||    
T  5334 cttaattacacttttggtcctcgtgttttggcctagtcacgaaactggtcttgtccttttaaaacagaataaaacggtaattcaattatcatttttgttg 5235  T
Q  169 catttttcgtcct 181  Q
    |||||||||||||    
T  5234 catttttcgtcct 5222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 146; Significance: 5e-77; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 66 - 235
Target Start/End: Original strand, 18257136 - 18257305
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 165  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||     
T  18257136 aggcttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 18257235  T
Q  166 ttgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccc 235  Q
    |||||||||||||| | ||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  18257236 ttgcatttttcgtcataccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 18257305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 66 - 235
Target Start/End: Original strand, 20741099 - 20741268
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| ||||||||||     
T  20741099 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaaatatcatttttg 20741198  T
Q  166 ttgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccc 235  Q
    |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  20741199 ttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 20741268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 67 - 235
Target Start/End: Complemental strand, 10900475 - 10900307
Alignment:
Q  67 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttat 166  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| |    
T  10900475 ggcttaattacacttttggtcctcgtattttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 10900376  T
Q  167 tgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccc 235  Q
    ||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  10900375 tgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 10900307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 67 - 235
Target Start/End: Complemental strand, 11277127 - 11276959
Alignment:
Q  67 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttat 166  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| |    
T  11277127 ggcttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgcccttttaaaacagaacaaaacggttcttcaattatcatttttgt 11277028  T
Q  167 tgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccc 235  Q
    ||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  11277027 tgcatttttcgtcctaccccccattttattctccaaaaacgaagagaaatgacagttttagacctaccc 11276959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 65 - 235
Target Start/End: Complemental strand, 15828188 - 15828018
Alignment:
Q  65 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 164  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||| | ||||||||||||| |||||||||||||||||||||||||||||    
T  15828188 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatacccttttaaaacaaaacaaaacggtccttcaattatcattttt 15828089  T
Q  165 attgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccc 235  Q
     |||||||||||||||| ||||||||||||||||||||||||| |||||||| ||||||||||||||||||    
T  15828088 gttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaataacagttttagacctaccc 15828018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 68 - 235
Target Start/End: Complemental strand, 31470860 - 31470693
Alignment:
Q  68 gcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttatt 167  Q
    |||||||||||||||||||||| ||||||| |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| ||    
T  31470860 gcttaattacacttttggtccttgtgttttagcctactcacgaaactggttctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgtt 31470761  T
Q  168 gcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccc 235  Q
    |||||||||||||| ||||||||||||||||||||||||| |||||||||||| ||||||| ||||||    
T  31470760 gcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacaattttagatctaccc 31470693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 66 - 227
Target Start/End: Original strand, 2319671 - 2319832
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 165  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||     
T  2319671 aggcttaattacatttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 2319770  T
Q  166 ttgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttag 227  Q
    |||||||||||||||| ||||||||||||||||||| ||||| |||||||||| ||||||||    
T  2319771 ttgcatttttcgtcctaccccccattttattctccagaaacgcagagaaatgatagttttag 2319832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 66 - 235
Target Start/End: Complemental strand, 12935703 - 12935534
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 165  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||| || |||||||||||||||||||||||||||||||||||||     
T  12935703 aggcttaattacacttttggtcctcgtgttttggcgtactcacgaaactggtcctgcctttataaaacagaacaaaacggtccttcaattatcatttttg 12935604  T
Q  166 ttgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccc 235  Q
    || ||||||||||||| ||||||||||||||||||| ||||  |||||||||||||||||||||||||||    
T  12935603 ttacatttttcgtcctaccccccattttattctccataaacacagagaaatgacagttttagacctaccc 12935534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 66 - 235
Target Start/End: Original strand, 28472636 - 28472804
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 165  Q
    |||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| |||||||||||||||||| |||| ||||||||||||||||     
T  28472636 aggcttaattacacttttggtcctcgtgttttggccaactcacgaaagtggtcctgccattttaaaacagaacaaaatggtcattcaattatcatttttg 28472735  T
Q  166 ttgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccc 235  Q
    ||||||||||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  28472736 ttgcatttttcgtcct-acccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 28472804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 66 - 235
Target Start/End: Original strand, 29859825 - 29859993
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 165  Q
    |||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| |||||||||||||||||| |||| ||||||||||||||||     
T  29859825 aggcttaattacacttttggtcctcgtgttttggccaactcacgaaagtggtcctgccattttaaaacagaacaaaatggtcattcaattatcatttttg 29859924  T
Q  166 ttgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccc 235  Q
    ||||||||||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  29859925 ttgcatttttcgtcct-acccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 29859993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 67 - 235
Target Start/End: Complemental strand, 1149977 - 1149808
Alignment:
Q  67 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttat 166  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||| ||||| ||||||||||||| ||||||||||||||||||||||| ||||||| |    
T  1149977 ggcttaattacacttttggtcctcgtgttttagcctactcatgaaactggtcatgcccttttaaaatagaacaaaacggtccttcaattaccatttttgt 1149878  T
Q  167 tgcatttttcgtcctgccccccattttattctcca-aaaacgtagagaaatgacagttttagacctaccc 235  Q
    ||||||||||||||| ||||||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  1149877 tgcatttttcgtcctaccccccattttattctccaaaaaacgcagagaaatgacagttttagacctaccc 1149808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 66 - 235
Target Start/End: Original strand, 11444986 - 11445155
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| |||||||||||| |||| |||||||||||||||||||||     
T  11444986 aggcttaattacacttttggtcctcgtgttttggcctactcacgaagctggtcctgcccctttaaaacagaataaaatggtccttcaattatcatttttg 11445085  T
Q  166 ttgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccc 235  Q
    |||||||||||||||| ||| ||||||||||||| ||||||  |||||||||||||||||||||||||||    
T  11445086 ttgcatttttcgtcctaccctccattttattctctaaaaacacagagaaatgacagttttagacctaccc 11445155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 70 - 235
Target Start/End: Original strand, 10899942 - 10900108
Alignment:
Q  70 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattgc 169  Q
    |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  10899942 ttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 10900041  T
Q  170 atttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttagacctaccc 235  Q
    |||||||||||| || || ||||| |  ||||| ||||| |||||||||||||||||||||||||||    
T  10900042 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttagacctaccc 10900108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 66 - 227
Target Start/End: Original strand, 12935156 - 12935318
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||     
T  12935156 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 12935255  T
Q  166 ttgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 227  Q
    |||||||||||||||| || || ||||| |  ||||| ||||| |||||||||||||||||||    
T  12935256 ttgcatttttcgtcctacctcctattttcaaactccataaacgcagagaaatgacagttttag 12935318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 68 - 226
Target Start/End: Complemental strand, 18505463 - 18505305
Alignment:
Q  68 gcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttatt 167  Q
    ||||||||| |||||||||||||||||||||| |||||||||||| || |||||||||||||||||| |||||||| |||||||||||||||||||| ||    
T  18505463 gcttaattatacttttggtcctcgtgttttggtctactcacgaaactgatcctgcccttttaaaacataacaaaacagtccttcaattatcatttttgtt 18505364  T
Q  168 gcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagtttta 226  Q
    |||||||||||||| |||||||||||||||||||| |||| ||||||||||||||||||    
T  18505363 gcatttttcgtcctaccccccattttattctccaacaacgaagagaaatgacagtttta 18505305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 65 - 234
Target Start/End: Original strand, 23073997 - 23074155
Alignment:
Q  65 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 164  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||           
T  23073997 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaacggtccttcaattat------- 23074089  T
Q  165 attgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctacc 234  Q
        ||||||||||||| ||||||||||||||||||||||||| |||||||| |||||||||||||||||    
T  23074090 ----catttttcgtcctaccccccattttattctccaaaaacgcagagaaataacagttttagacctacc 23074155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 66 - 227
Target Start/End: Complemental strand, 11445533 - 11445371
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||     
T  11445533 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaattatcatttttg 11445434  T
Q  166 ttgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 227  Q
    |||||||||||||||| || || ||||| |  ||| | ||||| |||||||||||||||||||    
T  11445433 ttgcatttttcgtcctacctcctattttcaaactctagaaacgcagagaaatgacagttttag 11445371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 66 - 227
Target Start/End: Complemental strand, 22219899 - 22219737
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||     
T  22219899 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 22219800  T
Q  166 ttgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 227  Q
    ||||||||||||| || || || ||||| |  ||||| ||||  |||||||||||||||||||    
T  22219799 ttgcatttttcgttctacctcctattttcaaactccagaaactcagagaaatgacagttttag 22219737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 66 - 227
Target Start/End: Complemental strand, 23075674 - 23075512
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||     
T  23075674 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 23075575  T
Q  166 ttgcatttttcgtcctgcccccca-ttttattctccaaaaacgtagagaaatgacagttttag 227  Q
    ||||||||||||| || || || | |||||  ||||||||| | |||||||||||||||||||    
T  23075574 ttgcatttttcgttctacctcctatttttaaactccaaaaatgcagagaaatgacagttttag 23075512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 70 - 231
Target Start/End: Complemental strand, 2322760 - 2322600
Alignment:
Q  70 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattgc 169  Q
    |||||||||||||||||| ||||||||||| |||||||||||| | ||| |||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  2322760 ttaattacacttttggtcttcgtgttttggtctactcacgaaactagtcttgcctttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 2322661  T
Q  170 atttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacct 231  Q
    |||||||||||| |||| ||||||||||||| |||||  |||||||||||||||||||||||    
T  2322660 atttttcgtcctacccctcattttattctcc-aaaacacagagaaatgacagttttagacct 2322600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 67 - 230
Target Start/End: Original strand, 4811372 - 4811535
Alignment:
Q  67 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttat 166  Q
    ||||||||||||||||||||||  || |||||| |||||||||||| ||||| ||||||||||||| |||| |||||||||||||||||||||||||| |    
T  4811372 ggcttaattacacttttggtcccagtattttggtctactcacgaaactggtcatgcccttttaaaatagaataaaacggtccttcaattatcatttttgt 4811471  T
Q  167 tgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacc 230  Q
    | ||||||||||| | |||||||||||||||| |||||||| ||| |||| |||||||||||||    
T  4811472 ttcatttttcgtcttaccccccattttattcttcaaaaacgcagataaataacagttttagacc 4811535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 70 - 227
Target Start/End: Original strand, 18504922 - 18505080
Alignment:
Q  70 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattgc 169  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||||||||||| || |    
T  18504922 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcctttttaaaacagaacaaaacggttcttcaattatcatttttgtttc 18505021  T
Q  170 atttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 227  Q
    |||||||||||| || || ||||| |  ||| | ||| |||||||||||||||||||||    
T  18505022 atttttcgtcctacctcctattttcaaactctagaaatgtagagaaatgacagttttag 18505080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 65 - 227
Target Start/End: Complemental strand, 20741651 - 20741485
Alignment:
Q  65 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcat---t 161  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||   |    
T  20741651 aaggcttaattacactcttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 20741552  T
Q  162 tttattgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 227  Q
    ||| |||||||||||||||| || || ||||| |  ||||| ||||| |||||||||||| ||||||    
T  20741551 ttttttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacaattttag 20741485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 67 - 227
Target Start/End: Complemental strand, 18257682 - 18257521
Alignment:
Q  67 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttat 166  Q
    |||||||||| ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||| |    
T  18257682 ggcttaattatacttttggtcctcgtgttttgacctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattattatttttgt 18257583  T
Q  167 tgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 227  Q
    | ||||||||||||| || |  |||||    ||||| | |||||||||||||||||||||||    
T  18257582 tacatttttcgtcctacctcatattttccaactccatacacgtagagaaatgacagttttag 18257521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 64 - 227
Target Start/End: Original strand, 31470312 - 31470476
Alignment:
Q  64 taaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 163  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| ||| |||||||||||||||||||| ||| ||||||||| |||||    
T  31470312 taaggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcatgctcttttaaaacagaacaaaacagtcattcaattattatttt 31470411  T
Q  164 tattgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 227  Q
    | |||||||||||||||| || || ||||| |  ||||| ||||| ||||||||| |||||||||    
T  31470412 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 31470476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 69 - 207
Target Start/End: Original strand, 29033436 - 29033575
Alignment:
Q  69 cttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattg 168  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| |||    
T  29033436 cttaattacacttttggtcctcgtattttggcctgctcacgaaattggtcctgcccttttaaaacagaacaaaactgtccttcagttatcatttttgttg 29033535  T
Q  169 catttttcgtcctgccccccattttatt-ctccaaaaacg 207  Q
    ||  |||| |||| ||||||||||| || |||||||||||    
T  29033536 cacatttcatcctaccccccatttttttcctccaaaaacg 29033575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 65 - 235
Target Start/End: Original strand, 11276588 - 11276759
Alignment:
Q  65 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 164  Q
    ||||||||||||||| ||| |||| |||||||||| ||||||| |||| || |||| ||||||||||||||||||||| |||||||||||| ||||||||    
T  11276588 aaggcttaattacacgtttagtccgcgtgttttggtctactcatgaaactgatcctacccttttaaaacagaacaaaatggtccttcaattgtcattttt 11276687  T
Q  165 attgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttagacctaccc 235  Q
     || ||||||||||||| || || ||||| |  ||||||||||| ||||||||||||||||||| |||||||    
T  11276688 gtttcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcctaccc 11276759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 63 - 203
Target Start/End: Complemental strand, 3835275 - 3835135
Alignment:
Q  63 ataaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 162  Q
    |||||| |||||||||||||||||||  |||||||| ||||||||||||| ||||||||||  |||||||||||||||||  |||||| |||||||||||    
T  3835275 ataaggtttaattacacttttggtccatgtgttttgacctactcacgaaaatggtcctgcctctttaaaacagaacaaaattgtcctttaattatcattt 3835176  T
Q  163 ttattgcatttttcgtcctgccccccattttattctccaaa 203  Q
    || | |||||||||||||| ||||||||||||| |||||||    
T  3835175 ttgtggcatttttcgtcctaccccccattttatcctccaaa 3835135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 69 - 207
Target Start/End: Complemental strand, 29035180 - 29035042
Alignment:
Q  69 cttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattg 168  Q
    ||||||||||||||| ||||||||||||| |||||||||||||||||||  |||||||||||||||||||||||  |||||| | ||||||||||| |||    
T  29035180 cttaattacacttttcgtcctcgtgttttagcctactcacgaaattggttatgcccttttaaaacagaacaaaattgtcctttagttatcatttttgttg 29035081  T
Q  169 catttttcgtcctgccccccattttattctccaaaaacg 207  Q
    ||||||||||||  ||| ||||||| | |||||||||||    
T  29035080 catttttcgtcccaccctccattttttcctccaaaaacg 29035042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 66 - 155
Target Start/End: Original strand, 1149464 - 1149553
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaatt 155  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  1149464 aggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaatt 1149553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 66 - 207
Target Start/End: Original strand, 18296144 - 18296284
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 165  Q
    ||||||||||| | |||| |||||||||||||| | ||||||| |||||| |  |||||||||||||||||||||||| |||||||| |||||||||||     
T  18296144 aggcttaattataattttagtcctcgtgttttgacttactcacaaaattgatattgcccttttaaaacagaacaaaaccgtccttcatttatcatttttg 18296243  T
Q  166 ttgcatttttcgtcctgccccccattttattctccaaaaacg 207  Q
    ||||||||||||||||  |||||||||||| |||||||||||    
T  18296244 ttgcatttttcgtcct-acccccattttatcctccaaaaacg 18296284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 68 - 181
Target Start/End: Original strand, 15827639 - 15827754
Alignment:
Q  68 gcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaa--acggtccttcaattatcattttta 165  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| |||| ||| |||||||||||| ||||||  |||||||||||| ||||||||||     
T  15827639 gcttaattacacttttggtcctcgtgttttggcttactcacgaaactggttctgtccttttaaaacataacaaattacggtccttcaactatcatttttg 15827738  T
Q  166 ttgcatttttcgtcct 181  Q
    ||||||||||||||||    
T  15827739 ttgcatttttcgtcct 15827754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 67 - 176
Target Start/End: Complemental strand, 4811801 - 4811692
Alignment:
Q  67 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttat 166  Q
    |||||||||| ||||||| |||||||||||||||||||||| |||| || || |||  |||||||||||||||||||||||||||||||||||||||| |    
T  4811801 ggcttaattatacttttgatcctcgtgttttggcctactcatgaaactgatcatgcatttttaaaacagaacaaaacggtccttcaattatcatttttgt 4811702  T
Q  167 tgcatttttc 176  Q
    ||||||||||    
T  4811701 tgcatttttc 4811692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 67 - 123
Target Start/End: Complemental strand, 22534270 - 22534214
Alignment:
Q  67 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcc 123  Q
    |||||||||||||||||||||||||| ||||| || |||||||||| ||||||||||    
T  22534270 ggcttaattacacttttggtcctcgtattttgaccaactcacgaaaatggtcctgcc 22534214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 114
Target Start/End: Complemental strand, 31574273 - 31574224
Alignment:
Q  65 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaatt 114  Q
    ||||||||||||||||||||||||| |  ||||| || ||||||||||||    
T  31574273 aaggcttaattacacttttggtccttgcattttgaccaactcacgaaatt 31574224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 114
Target Start/End: Complemental strand, 5121016 - 5120968
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaatt 114  Q
    |||||||||||||||||||||||| |  ||||| || ||||||||||||    
T  5121016 aggcttaattacacttttggtccttgcattttgaccaactcacgaaatt 5120968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 120
Target Start/End: Original strand, 30250722 - 30250774
Alignment:
Q  68 gcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcct 120  Q
    ||||||||||| |||||||||| |  ||||| || ||||||||||||||||||    
T  30250722 gcttaattacaattttggtccttgcattttgaccaactcacgaaattggtcct 30250774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 146; Significance: 5e-77; HSPs: 67)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 70 - 235
Target Start/End: Original strand, 5136983 - 5137148
Alignment:
Q  70 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattgc 169  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  5136983 ttaattacacttttggtcctcgtgttttggccaactcacgaaattggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 5137082  T
Q  170 atttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccc 235  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  5137083 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 5137148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 67 - 235
Target Start/End: Complemental strand, 39556122 - 39555954
Alignment:
Q  67 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttat 166  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||  |    
T  39556122 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaattatcattttcgt 39556023  T
Q  167 tgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccc 235  Q
    ||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  39556022 tgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 39555954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 66 - 235
Target Start/End: Complemental strand, 24301102 - 24300933
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 165  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| | ||||||||||     
T  24301102 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgccattttaaaacaaaacaaaacggtccttcgagtatcatttttg 24301003  T
Q  166 ttgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccc 235  Q
    |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  24301002 ttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 24300933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 66 - 235
Target Start/End: Complemental strand, 31779198 - 31779029
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||     
T  31779198 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 31779099  T
Q  166 ttgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccc 235  Q
    |||||||||||||||  ||||||||||||||||||||||||| ||||||||| ||||||||||| |||||    
T  31779098 ttgcatttttcgtcccaccccccattttattctccaaaaacgcagagaaatgtcagttttagacgtaccc 31779029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 65 - 235
Target Start/End: Original strand, 23644460 - 23644630
Alignment:
Q  65 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 164  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||    
T  23644460 aaggcttaattacacttttggtcctcgtattttggcctactcacgaaattggtcctgccattttaaaacagaacaaaacagtccttcaattatcattttt 23644559  T
Q  165 attgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccc 235  Q
     |||||||||||||||| ||||||||||||||||||||||||| |||||||| | ||||||||||||||||    
T  23644560 gttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccc 23644630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 66 - 235
Target Start/End: Original strand, 20840559 - 20840728
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| |||||||||||||||||||||||||||||||     
T  20840559 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcctttttaaaatagaacaaaacggtccttcaattatcatttttg 20840658  T
Q  166 ttgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccc 235  Q
    |||||||||||||||| ||||||||||||||||||  ||||| |||||||||||||||||||||||||||    
T  20840659 ttgcatttttcgtcctaccccccattttattctccttaaacgcagagaaatgacagttttagacctaccc 20840728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 70 - 235
Target Start/End: Original strand, 41046703 - 41046868
Alignment:
Q  70 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattgc 169  Q
    |||||||||||||||||||||||||||||||||| | |||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  41046703 ttaattacacttttggtcctcgtgttttggcctaattacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 41046802  T
Q  170 atttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccc 235  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  41046803 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 41046868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 65 - 235
Target Start/End: Original strand, 37726927 - 37727097
Alignment:
Q  65 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 164  Q
    ||||||||||||||||||||||||||||||||||| || || |||||| |||| |||||||||||||||| |||||||||||||||||||||||||||||    
T  37726927 aaggcttaattacacttttggtcctcgtgttttggtctgcttacgaaactggttctgcccttttaaaacataacaaaacggtccttcaattatcattttt 37727026  T
Q  165 attgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccc 235  Q
     |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  37727027 gttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 37727097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 63 - 235
Target Start/End: Complemental strand, 27394126 - 27393954
Alignment:
Q  63 ataaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 162  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| |||||||||||||||||    
T  27394126 ataaggcttaattacacttttggtcctcgtgttttggcctactcacgaaataggtcctgcctttttaaaacagaacaaaacgatccttcaattatcattt 27394027  T
Q  163 ttattgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccc 235  Q
    || ||||||||| | |||| ||||| ||||||||||||||||||| |||||||| ||||||||||||||||||    
T  27394026 ttgttgcattttccatcctacccccaattttattctccaaaaacgcagagaaataacagttttagacctaccc 27393954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 67 - 235
Target Start/End: Original strand, 43973441 - 43973609
Alignment:
Q  67 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttat 166  Q
    |||||||||||||||||||||||||||||||| ||||||||||||| || |  ||||||||||||||||||||||||||||||||||||||||||||| |    
T  43973441 ggcttaattacacttttggtcctcgtgttttgtcctactcacgaaaatgattatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 43973540  T
Q  167 tgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccc 235  Q
    ||||||||||||||| ||||||||||||||||||||||||| ||| |||| ||||||||||||||||||    
T  43973541 tgcatttttcgtcctaccccccattttattctccaaaaacgcagataaataacagttttagacctaccc 43973609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 66 - 222
Target Start/End: Original strand, 48452988 - 48453144
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 165  Q
    |||||| ||||||||||||||| |||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||     
T  48452988 aggcttgattacacttttggtcatcgtgttttggcctactcacgaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcatttttg 48453087  T
Q  166 ttgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagt 222  Q
    |||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  48453088 ttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagt 48453144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 66 - 235
Target Start/End: Original strand, 30104481 - 30104649
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 165  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || | ||||||||||||||||||||||||     
T  30104481 aggcttaattacacttttggtcctcgtgttttgacctactcacgaaattggtcctgcccttttaaaacaaaatagaacggtccttcaattatcatttttg 30104580  T
Q  166 ttgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccc 235  Q
    ||||||||||||||||  ||||||||||||| || ||||||| |||||||||||||||||||||||||||    
T  30104581 ttgcatttttcgtcct-acccccattttattatctaaaaacgcagagaaatgacagttttagacctaccc 30104649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 67 - 232
Target Start/End: Complemental strand, 32535508 - 32535339
Alignment:
Q  67 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatc-----att 161  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||     |||    
T  32535508 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattaaatt 32535409  T
Q  162 tttattgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagaccta 232  Q
    ||| ||||||||||||||||  |||||||||||||||||||||||| |||||||||| |||||||||||||    
T  32535408 tttgttgcatttttcgtcct-acccccattttattctccaaaaacgcagagaaatgatagttttagaccta 32535339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 69 - 235
Target Start/End: Complemental strand, 25853770 - 25853604
Alignment:
Q  69 cttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattg 168  Q
    |||||||||||||||| |||||||||||||  |||||||||||| ||||| || | |||||||||||||||||| ||||||||||||||||||||| |||    
T  25853770 cttaattacacttttgatcctcgtgttttgctctactcacgaaactggtcttgtcattttaaaacagaacaaaatggtccttcaattatcatttttgttg 25853671  T
Q  169 catttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccc 235  Q
    ||||||||||||| ||||||||||||||||||||||||| |||||||| ||||||||||||||||||    
T  25853670 catttttcgtcctaccccccattttattctccaaaaacgcagagaaataacagttttagacctaccc 25853604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 66 - 235
Target Start/End: Complemental strand, 26837901 - 26837733
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 165  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| |||| ||||||||| |||| |||||||||||||| ||||| ||||||||||     
T  26837901 aggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggttctgcccttt-aaaatagaacaaaacggtcattcaagtatcatttttg 26837803  T
Q  166 ttgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccc 235  Q
    |||||||||| ||||| ||||||||||||||||||||||| | ||||||||||||||||||||| |||||    
T  26837802 ttgcattttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagacttaccc 26837733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 71 - 235
Target Start/End: Complemental strand, 22425354 - 22425190
Alignment:
Q  71 taattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattgca 170  Q
    |||||||||||||||||||||||||| ||||||||||||||  ||||| ||||||| ||||||||||||||||||| ||||||||||||||||| |||||    
T  22425354 taattacacttttggtcctcgtgtttcggcctactcacgaatctggtcatgcccttgtaaaacagaacaaaacggtacttcaattatcatttttgttgca 22425255  T
Q  171 tttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccc 235  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||| | | ||||||| ||||||    
T  22425254 tttttcgtcctaccccccattttattctccaaaaacgcagagaaattagatttttagatctaccc 22425190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 58 - 232
Target Start/End: Complemental strand, 17465046 - 17464871
Alignment:
Q  58 taattataaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattat 157  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||| || |||| |||||   ||||||||||| ||||||||||||||||||||||||    
T  17465046 taataataaggcttaattacatttttggtcctcgtgttttggcctacgcatgaaactggtctgacccttttaaaatagaacaaaacggtccttcaattat 17464947  T
Q  158 catttttattgca-tttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagaccta 232  Q
    ||||||| ||||| ||||| ||||| ||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  17464946 catttttgttgcatttttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagaccta 17464871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 66 - 227
Target Start/End: Complemental strand, 43973986 - 43973824
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||||||||||||     
T  43973986 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggttctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 43973887  T
Q  166 ttgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 227  Q
    |||||||||||||||| || || ||||| || | ||| ||||| |||||||||||||||||||    
T  43973886 ttgcatttttcgtcctacctcctattttcataccccagaaacgcagagaaatgacagttttag 43973824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 67 - 227
Target Start/End: Complemental strand, 37727475 - 37727314
Alignment:
Q  67 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttat 166  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| |    
T  37727475 ggcttaattacacttttggtcctcatgttttggcctactcacgaaactggtcctgctcttttaaaacagaacaaaacggtccttcaattatcatttttgt 37727376  T
Q  167 tgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 227  Q
    ||||||||||||||| || || ||||| |  ||||| ||||| |||||||||||||||||||    
T  37727375 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 37727314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 64 - 227
Target Start/End: Original strand, 27393658 - 27393822
Alignment:
Q  64 taaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 163  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||||||||    
T  27393658 taaggcttaattacacttttggtcctcgtgttttgacctactcacaaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcatttt 27393757  T
Q  164 tattgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 227  Q
    | |||||||||||||||| ||||| ||||| |  | ||| ||||| |||||||||||||||||||    
T  27393758 tgttgcatttttcgtcctaccccctattttcaaaccccagaaacgcagagaaatgacagttttag 27393822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 61 - 227
Target Start/End: Original strand, 17464485 - 17464652
Alignment:
Q  61 ttataaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcat 160  Q
    |||| |||||||||||||||||||||||||||||||||||||| || ||||| ||||| |||||||||||||||||||||||||||||||||||||||||    
T  17464485 ttattaggcttaattacacttttggtcctcgtgttttggcctattcgcgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcat 17464584  T
Q  161 ttttattgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 227  Q
    |||| |||||||||||||||| || || ||||| |  ||||| ||||||| |||||||||||||||||    
T  17464585 ttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgtaaagaaatgacagttttag 17464652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 65 - 227
Target Start/End: Complemental strand, 20841108 - 20840945
Alignment:
Q  65 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 164  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  20841108 aaggcttaattacacttttggtgctcgtgttttggcctactcacgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaattatcattttt 20841009  T
Q  165 attgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 227  Q
     |||||||||||||||| || || ||||| |  ||||| ||||| ||||||||| |||||||||    
T  20841008 gttgcatttttcgtcctacctcctattttcaaactccataaacgcagagaaatggcagttttag 20840945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 65 - 227
Target Start/End: Original strand, 39555576 - 39555739
Alignment:
Q  65 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 164  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| |||||||||||||||||||||    
T  39555576 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaaacagaacaaaatggtccttcaattatcattttt 39555675  T
Q  165 attgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 227  Q
     ||||||||||||| || || || ||||| |  ||||| ||||| |||||||||||||||||||    
T  39555676 gttgcatttttcgttctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 39555739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 70 - 207
Target Start/End: Complemental strand, 25612519 - 25612382
Alignment:
Q  70 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattgc 169  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| ||| || ||||||||||||| ||||    
T  25612519 ttaattacacttttggtcctcgtgttttgacctactcacgaaattggtcctgcccttttaaaatagaacaaaactgtcttttaattatcatttttgttgc 25612420  T
Q  170 atttttcgtcctgccccccattttattctccaaaaacg 207  Q
    |||||||||||| ||||||||||||| |||||||||||    
T  25612419 atttttcgtcctaccccccattttatcctccaaaaacg 25612382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 67 - 227
Target Start/End: Original strand, 25853234 - 25853395
Alignment:
Q  67 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttat 166  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||| |    
T  25853234 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcatgcccttttaaaatagaacaaaacggtccttcaattatcatttttgt 25853333  T
Q  167 tgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 227  Q
    |||||||||||| || || || ||||| |  ||||| ||||| |||||||| ||||||||||    
T  25853334 tgcatttttcgttctacctcctattttcaaactccagaaacgcagagaaataacagttttag 25853395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 70 - 235
Target Start/End: Complemental strand, 26275108 - 26274944
Alignment:
Q  70 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattgc 169  Q
    ||||||| | |||||| ||| |||||||| ||||||||||||| ||||||| |||||||||||||||| |||||||||| ||||||||||||||| ||||    
T  26275108 ttaattataattttggcccttgtgttttgacctactcacgaaactggtcctacccttttaaaacagaataaaacggtccctcaattatcatttttgttgc 26275009  T
Q  170 atttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccc 235  Q
     ||||||||||| |||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  26275008 -tttttcgtcctaccccccattttattctccaaaaccgcagagaaatgacagttttagacctaccc 26274944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 65 - 227
Target Start/End: Original strand, 31778651 - 31778814
Alignment:
Q  65 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 164  Q
    ||||||||||||||||||||||||||||||||||| ||||||| |||| ||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  31778651 aaggcttaattacacttttggtcctcgtgttttggtctactcatgaaactggtcctgcccttttaaaacagaacaaaacggtccttcgtttatcattttt 31778750  T
Q  165 attgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 227  Q
     |||||||||||||||| || || ||||| |  ||||| ||||| |||||||||||||||||||    
T  31778751 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 31778814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 66 - 227
Target Start/End: Complemental strand, 4275910 - 4275748
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| ||||||||||||||||||||||||||| |||||||||||||     
T  4275910 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgctcttttaaaacagaacaaaacggtcctttaattatcatttttg 4275811  T
Q  166 ttgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 227  Q
    |||||||||||||||| || || ||||| |  ||||| ||||| ||||||||| |||||||||    
T  4275810 ttgcatttttcgtcctacctcctattttcaaactccataaacgcagagaaatggcagttttag 4275748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 66 - 229
Target Start/End: Complemental strand, 29801962 - 29801798
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 165  Q
    ||||||||||||||||||| ||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||     
T  29801962 aggcttaattacacttttgatcctcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtctttcaattatcatttttg 29801863  T
Q  166 ttgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttagac 229  Q
    |||||||||||||||  || || ||||| |  ||||| ||||| |||||||||||| ||||||||    
T  29801862 ttgcatttttcgtcccacctcctattttcaaactccagaaacgcagagaaatgacaattttagac 29801798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 65 - 181
Target Start/End: Original strand, 32534957 - 32535073
Alignment:
Q  65 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 164  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  32534957 aaggtttaattacacttttggtcctcgtgttttggcatactcacgaaattggtcctgcctttttaaaacagaacaaaacggtccttcaattatcattttt 32535056  T
Q  165 attgcatttttcgtcct 181  Q
     ||||||||||||||||    
T  32535057 gttgcatttttcgtcct 32535073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 67 - 227
Target Start/End: Complemental strand, 23645010 - 23644849
Alignment:
Q  67 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttat 166  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| |    
T  23645010 ggcttaattatacttttggtcctcgtgttttggcctactcacgaaattggtcctacccttttaaaacagaacaaaacggtcattcaattatcatttttgt 23644911  T
Q  167 tgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 227  Q
    |||||||||| |||| || || ||||| |  ||| |  |||| |||||||||||||||||||    
T  23644910 tgcatttttcatcctacctcctattttcaaactctagtaacgcagagaaatgacagttttag 23644849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 63 - 227
Target Start/End: Complemental strand, 30098312 - 30098147
Alignment:
Q  63 ataaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 162  Q
    |||||||||||||||||||||||||||||||||||| | ||||||||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  30098312 ataaggcttaattacacttttggtcctcgtgttttgacatactcacgaaactggtcttgcccttttaaaacagaacaaaatggtccttcaattatcattt 30098213  T
Q  163 ttattgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 227  Q
    || |||||||||||||||| || || ||||| |  || || ||||| ||||| |||||||||||||    
T  30098212 ttgttgcatttttcgtcctacctcctattttcaaacttcagaaacgcagagatatgacagttttag 30098147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 67 - 206
Target Start/End: Complemental strand, 23228552 - 23228414
Alignment:
Q  67 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttat 166  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| || || |||||||||||||| ||||||||  ||||||||||||||||||||||    
T  23228552 ggcttaattacacttttggtccccgtgttttggcctactcacgaaaatgatcatgcccttttaaaac-gaacaaaattgtccttcaattatcatttttat 23228454  T
Q  167 tgcatttttcgtcctgccccccattttattctccaaaaac 206  Q
    ||||||||||||||| || |||||||||| ||||||||||    
T  23228453 tgcatttttcgtcctacctcccattttatcctccaaaaac 23228414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 66 - 227
Target Start/End: Complemental strand, 5137527 - 5137365
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 165  Q
    |||||||||||||||||||||||||||||||||||||||||| |||| |||| |||||||||||||| ||||||||| |||||||||||||||||||||     
T  5137527 aggcttaattacacttttggtcctcgtgttttggcctactcatgaaactggttctgcccttttaaaatagaacaaaatggtccttcaattatcatttttg 5137428  T
Q  166 ttgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 227  Q
    |||||||||| |||||  | || ||||| |  ||||| ||||| |||||||||||||||||||    
T  5137427 ttgcatttttagtcctatctcctattttcaaactccagaaacgcagagaaatgacagttttag 5137365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 70 - 227
Target Start/End: Original strand, 26837363 - 26837521
Alignment:
Q  70 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattgc 169  Q
    ||||||||| |||||||||| || |||||||||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||||||| ||||    
T  26837363 ttaattacatttttggtccttgtattttggcctactcacgaaattggtcctgcccttttataacataacgaaacggtccttcaattatcatttttgttgc 26837462  T
Q  170 atttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 227  Q
    |||||||||||| || || ||||| |  ||||| ||||| |||||||||||||||||||    
T  26837463 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 26837521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 66 - 227
Target Start/End: Original strand, 22424813 - 22424975
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 165  Q
    ||||||||||||||||||||| |||||||||  ||||||| |||||| |||| ||| ||||||||||||||||||||||||||||||||||||||||||     
T  22424813 aggcttaattacacttttggttctcgtgtttaagcctacttacgaaactggttctgtccttttaaaacagaacaaaacggtccttcaattatcatttttg 22424912  T
Q  166 ttgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 227  Q
    |||||||||||||||| || || ||||| |  ||||| ||| | |||||||||||||||||||    
T  22424913 ttgcatttttcgtcctacctcctattttcaaactccagaaatgcagagaaatgacagttttag 22424975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 62 - 188
Target Start/End: Original strand, 29801351 - 29801477
Alignment:
Q  62 tataaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 161  Q
    |||| ||||||||||||||||||||| |||||||||||| ||||||| ||| |||||||||||||||||||||||||||||||||||||||| |||||||    
T  29801351 tatatggcttaattacacttttggtcatcgtgttttggcatactcacaaaactggtcctgcccttttaaaacagaacaaaacggtccttcaagtatcatt 29801450  T
Q  162 tttattgcatttttcgtcctgcccccc 188  Q
    ||| |||||||||||||| | ||||||    
T  29801451 tttgttgcatttttcgtcttacccccc 29801477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 67 - 207
Target Start/End: Complemental strand, 50116954 - 50116814
Alignment:
Q  67 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttat 166  Q
    |||||||||||||||||| ||||||||||||| | ||||||||||||||||| ||||||||| ||| |||||||||||||| |||| ||||||||||| |    
T  50116954 ggcttaattacacttttgatcctcgtgttttgacttactcacgaaattggtcatgcccttttgaaagagaacaaaacggtcattcagttatcatttttgt 50116855  T
Q  167 tgcatttttcgtcctgccccccattttattctccaaaaacg 207  Q
    |||| |||||||||| ||||||||||| | |||||||||||    
T  50116854 tgcaattttcgtcctaccccccattttttcctccaaaaacg 50116814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 68 - 208
Target Start/End: Complemental strand, 32697244 - 32697105
Alignment:
Q  68 gcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttatt 167  Q
    ||||||||| | |||||||||||||||||| |||||||||||||||| |||  ||||||||||||||||||||||  || ||||||||||||||||| ||    
T  32697244 gcttaattatatttttggtcctcgtgttttagcctactcacgaaattagtcacgcccttttaaaacagaacaaaattgtgcttcaattatcatttttgtt 32697145  T
Q  168 gcatttttcgtcctgccccccattttattctccaaaaacgt 208  Q
    ||||||||||||||  |||||||||||| ||||||||||||    
T  32697144 gcatttttcgtcct-acccccattttatcctccaaaaacgt 32697105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 65 - 227
Target Start/End: Original strand, 26274565 - 26274728
Alignment:
Q  65 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 164  Q
    |||| ||||||||| ||||| |||| || |||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26274565 aaggtttaattacatttttgatccttgtattttggactactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 26274664  T
Q  165 attgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 227  Q
     |||||||||||||| | || || ||||| |  ||||| ||||| ||  |||||||||||||||    
T  26274665 gttgcatttttcgtcatacctcctattttcaaactccagaaacgcagttaaatgacagttttag 26274728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 66 - 207
Target Start/End: Complemental strand, 51474880 - 51474738
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 165  Q
    ||||||||||||||||||||| | ||||||||||| ||||||||||||||||| ||||||||||||||| |||||||  |||||| | |||||||||||     
T  51474880 aggcttaattacacttttggttcccgtgttttggcatactcacgaaattggtcatgcccttttaaaacataacaaaattgtcctttagttatcatttttg 51474781  T
Q  166 ttgcatttttcgtcctgcccccca-ttttattctccaaaaacg 207  Q
    |||||||||||||||| ||||| | |||||| |||||||||||    
T  51474780 ttgcatttttcgtcctacccccaatttttatcctccaaaaacg 51474738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 66 - 207
Target Start/End: Original strand, 37220556 - 37220697
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 165  Q
    ||||||||||||||||||||||||||| ||||||||||||||| | || | || ||| |||||||||||||| ||||  |||||||| |||||||||||     
T  37220556 aggcttaattacacttttggtcctcgtattttggcctactcacaatatcgatcatgctcttttaaaacagaataaaattgtccttcagttatcatttttg 37220655  T
Q  166 ttgcatttttcgtcctgccccccattttattctccaaaaacg 207  Q
    ||||| |||||||||| ||| ||||||||| |||||||||||    
T  37220656 ttgcacttttcgtcctaccctccattttatcctccaaaaacg 37220697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 68 - 181
Target Start/End: Original strand, 51473429 - 51473542
Alignment:
Q  68 gcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttatt 167  Q
    |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||  |||||||  ||||||||||| ||    
T  51473429 gcttaattacacttttggtcctcgtgttttggtctattcacgaaattggtcctgcccttttaaaacagaacaaaattgtccttcggttatcatttttgtt 51473528  T
Q  168 gcatttttcgtcct 181  Q
    ||| |||| |||||    
T  51473529 gcacttttggtcct 51473542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 65 - 227
Target Start/End: Original strand, 24300555 - 24300717
Alignment:
Q  65 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 164  Q
    |||| ||||||||| |||||||| |||||||||||| || |||||||| |||||||| ||||||||||||||| |||||||| |||||||||||||||||    
T  24300555 aaggtttaattacatttttggtc-tcgtgttttggcttattcacgaaactggtcctgtccttttaaaacagaataaaacggttcttcaattatcattttt 24300653  T
Q  165 attgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 227  Q
     ||||| |||||||||  || || ||||| |  ||||| ||||| |||||||||||||||||||    
T  24300654 gttgcaattttcgtcccacctcctattttcaaactccagaaacgcagagaaatgacagttttag 24300717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 66 - 205
Target Start/End: Original strand, 45965937 - 45966076
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 165  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| ||  |||||| ||||||||||| |||||||  ||||||| |||||||||| |     
T  45965937 aggcttaattacacttttggtcctcgtgttttggcatactcacgaagttaatcctgctcttttaaaacataacaaaaatgtccttcgattatcatttgtg 45966036  T
Q  166 ttgcatttttcgtcctgccccccattttattctccaaaaa 205  Q
    ||||||||||||| ||  |||||||||| | |||||||||    
T  45966037 ttgcatttttcgttctaacccccattttctcctccaaaaa 45966076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 65 - 227
Target Start/End: Complemental strand, 41047244 - 41047083
Alignment:
Q  65 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 164  Q
    |||| ||||||||||||| | || || ||||||||||||||||||||| |||| ||| ||||||||||||||| ||||| ||||||||||||||||||||    
T  41047244 aaggtttaattacactttcg-tcttcatgttttggcctactcacgaaactggttctgtccttttaaaacagaataaaac-gtccttcaattatcattttt 41047147  T
Q  165 attgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 227  Q
     |||||||||||||||| || || ||||| |  ||||| ||||| ||||||||| |||||||||    
T  41047146 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 41047083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 69 - 205
Target Start/End: Complemental strand, 25420684 - 25420548
Alignment:
Q  69 cttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattg 168  Q
    |||||||||||||||| || |||| ||||| |||||||||||||||| ||  |||||||||||| |||| ||||  ||||||||||||| |||||| |||    
T  25420684 cttaattacacttttgatcatcgtattttgacctactcacgaaattgatcacgcccttttaaaatagaataaaattgtccttcaattattatttttgttg 25420585  T
Q  169 catttttcgtcctgccccccattttattctccaaaaa 205  Q
    ||||||||||| | ||||||||||||| || ||||||    
T  25420584 catttttcgtcataccccccattttatccttcaaaaa 25420548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 66 - 153
Target Start/End: Complemental strand, 37222117 - 37222030
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaa 153  Q
    ||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| |||||||||||||||||||  ||||||||    
T  37222117 aggcttaattacacttttggtcctcgtgttttgccctactcacaaaattggtcctgccattttaaaacagaacaaaaccatccttcaa 37222030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 68 - 207
Target Start/End: Original strand, 25419145 - 25419284
Alignment:
Q  68 gcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtcc-ttcaattatca-ttttta 165  Q
    |||| |||| |||||||||| ||||||||| || ||||||||||||| || ||||||||||||||||||||||||| |||| ||||||||||| |||||     
T  25419145 gcttgattatacttttggtcttcgtgttttagcttactcacgaaattagttctgcccttttaaaacagaacaaaactgtcctttcaattatcattttttt 25419244  T
Q  166 ttgcatttttcgtcctgccccccattttattctccaaaaacg 207  Q
    ||||| |||| |||||  |||||||||||  |||||||||||    
T  25419245 ttgcagttttagtccttacccccatttta--ctccaaaaacg 25419284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 86 - 195
Target Start/End: Complemental strand, 18010271 - 18010162
Alignment:
Q  86 tcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattgcatttttcgtcctgccc 185  Q
    ||||| |||||| | |||||||||||| |||| | ||||||||||||||||||||||  ||  |||||||||||||||| ||||||||||||||||||||    
T  18010271 tcctcctgttttcgtctactcacgaaaatggttccgcccttttaaaacagaacaaaattgttattcaattatcatttttgttgcatttttcgtcctgccc 18010172  T
Q  186 cccattttat 195  Q
     |||||||||    
T  18010171 tccattttat 18010162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 64 - 207
Target Start/End: Original strand, 23227259 - 23227396
Alignment:
Q  64 taaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 163  Q
    ||||||| ||||| ||||||||||   |||||||||| ||||||||||| |||||||       | ||||||||||||   ||||| ||||| |||||||    
T  23227259 taaggctcaattagacttttggtctctgtgttttggcttactcacgaaaatggtcctc------tgaaacagaacaaatttgtcctccaattttcatttt 23227352  T
Q  164 tattgcatttttcgtcctgccccccattttattctccaaaaacg 207  Q
    | |||||||||||||||| | ||||||||||| |||||||||||    
T  23227353 tgttgcatttttcgtccttctccccattttatcctccaaaaacg 23227396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 70 - 194
Target Start/End: Original strand, 32695706 - 32695830
Alignment:
Q  70 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattgc 169  Q
    ||||||||| ||||||||||| | |||||||||||| ||||||||| |  || | ||||||||||||||||||  ||||| | ||||| |||||| ||||    
T  32695706 ttaattacatttttggtcctcatattttggcctacttacgaaattgattatgtctttttaaaacagaacaaaattgtcctacgattattatttttgttgc 32695805  T
Q  170 atttttcgtcctgccccccatttta 194  Q
    | |||| |||||  ||| |||||||    
T  32695806 aattttagtccttaccctcatttta 32695830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 66 - 235
Target Start/End: Complemental strand, 27200238 - 27200070
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 165  Q
    |||||||||||||||||||||||| |  ||||| ||  ||||||||| |||| |||||  ||| |||  |||||| || |||||  || |||||| |||     
T  27200238 aggcttaattacacttttggtccttgcattttgaccagctcacgaaaatggttctgcctctttcaaatcgaacaataccgtccta-aactatcatgtttt 27200140  T
Q  166 ttgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccc 235  Q
    ||||| |||| ||| | || || |||||   ||||| ||||| ||||||||||||| |||||||||||||    
T  27200139 ttgcagttttagtcatacctcctattttcaactccagaaacgcagagaaatgacaggtttagacctaccc 27200070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 66 - 235
Target Start/End: Original strand, 49407795 - 49407963
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 165  Q
    ||||||||||||||||||||||||||  ||||| ||  ||||||||| ||||| ||||  ||| ||| |||||||||| |||| | || | | || |||     
T  49407795 aggcttaattacacttttggtcctcgcattttgaccagctcacgaaaatggtcatgcctctttcaaatagaacaaaaccgtccctaaact-ttatgtttt 49407893  T
Q  166 ttgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccc 235  Q
     | || |||| ||| | || || |||||   ||||||||||| |||||||||||| ||||||||||||||    
T  49407894 gtacagttttagtcatacctcctattttcaactccaaaaacgcagagaaatgacaattttagacctaccc 49407963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 183 - 234
Target Start/End: Original strand, 29801532 - 29801583
Alignment:
Q  183 ccccccattttattctccaaaaacgtagagaaatgacagttttagacctacc 234  Q
    |||||||||||||||| |||||| | ||||||||||||||||||||| ||||    
T  29801532 ccccccattttattcttcaaaaatgcagagaaatgacagttttagacatacc 29801583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 65 - 120
Target Start/End: Original strand, 51827955 - 51828010
Alignment:
Q  65 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcct 120  Q
    ||||||||||||||||||||||||| |  ||||| || ||||||||||||||||||    
T  51827955 aaggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcct 51828010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 66 - 120
Target Start/End: Complemental strand, 52375878 - 52375824
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcct 120  Q
    ||||||||||||||||||||||||||  ||||| || |||||||||| |||||||    
T  52375878 aggcttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtcct 52375824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 61 - 118
Target Start/End: Complemental strand, 49720913 - 49720856
Alignment:
Q  61 ttataaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtc 118  Q
    |||||||||||||||||||||||||||||  | ||||| || |||||||||| |||||    
T  49720913 ttataaggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtc 49720856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 70 - 142
Target Start/End: Original strand, 22370599 - 22370671
Alignment:
Q  70 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaa 142  Q
    ||||||||||||||||||||||  ||||| || |||||||||| ||||||| || |||| ||||  |||||||    
T  22370599 ttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtcctaccttttttaaaccaaacaaaa 22370671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 65 - 120
Target Start/End: Complemental strand, 330384 - 330329
Alignment:
Q  65 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcct 120  Q
    ||||||||||||||| |||||||||||  ||||| || |||||||||| |||||||    
T  330384 aaggcttaattacacatttggtcctcgcattttgaccaactcacgaaaatggtcct 330329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 65 - 116
Target Start/End: Complemental strand, 14654737 - 14654686
Alignment:
Q  65 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattgg 116  Q
    ||||||||||||||||||||||||| |  ||||| || ||||||||||||||    
T  14654737 aaggcttaattacacttttggtccttgcattttgaccaactcacgaaattgg 14654686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 63 - 98
Target Start/End: Original strand, 25611494 - 25611529
Alignment:
Q  63 ataaggcttaattacacttttggtcctcgtgttttg 98  Q
    |||||||||||||||||||||| |||||||||||||    
T  25611494 ataaggcttaattacacttttgatcctcgtgttttg 25611529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 65 - 120
Target Start/End: Complemental strand, 41998776 - 41998721
Alignment:
Q  65 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcct 120  Q
    ||||||||||||||||||||||||| |  ||||| || ||| ||||||||||||||    
T  41998776 aaggcttaattacacttttggtccttgcattttgaccaacttacgaaattggtcct 41998721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 120
Target Start/End: Original strand, 49720370 - 49720424
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcct 120  Q
    ||||||||||||||||||| |||| |  ||||| || ||||||||||||||||||    
T  49720370 aggcttaattacacttttgatccttgcattttgaccaactcacgaaattggtcct 49720424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 235
Target Start/End: Original strand, 55192247 - 55192285
Alignment:
Q  197 ctccaaaaacgtagagaaatgacagttttagacctaccc 235  Q
    ||||| ||||| |||||||||||||||||||||||||||    
T  55192247 ctccagaaacgcagagaaatgacagttttagacctaccc 55192285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 67 - 120
Target Start/End: Original strand, 40275093 - 40275146
Alignment:
Q  67 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcct 120  Q
    ||||||||||||||||||||||||   ||||| || |||||||||| |||||||    
T  40275093 ggcttaattacacttttggtcctcacattttgaccaactcacgaaaatggtcct 40275146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 118
Target Start/End: Original strand, 46013420 - 46013473
Alignment:
Q  65 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtc 118  Q
    |||||||||||||||||||| |||| |  ||||| || ||||||||||||||||    
T  46013420 aaggcttaattacacttttgatccttgcattttgaccaactcacgaaattggtc 46013473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 146; Significance: 5e-77; HSPs: 53)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 70 - 235
Target Start/End: Original strand, 11090524 - 11090689
Alignment:
Q  70 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattgc 169  Q
    ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  11090524 ttaattacacttttggtcctcgtgttttggcctactcacgaaacttgtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 11090623  T
Q  170 atttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccc 235  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  11090624 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 11090689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 66 - 235
Target Start/End: Original strand, 1978107 - 1978276
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 165  Q
    ||||||||||||| |||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||     
T  1978107 aggcttaattacatttttggtccttgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 1978206  T
Q  166 ttgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccc 235  Q
    |||||||||| |||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  1978207 ttgcattttttgtcctgtcccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 1978276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 61 - 232
Target Start/End: Original strand, 239347 - 239517
Alignment:
Q  61 ttataaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcat 160  Q
    |||| |||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||    
T  239347 ttattaggcttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcctgcc-ttttaaaacagaacaaaacggtccttcaattatcat 239445  T
Q  161 ttttattgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagaccta 232  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  239446 ttttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagaccta 239517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 64 - 235
Target Start/End: Original strand, 40027137 - 40027308
Alignment:
Q  64 taaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 163  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  40027137 taaggcttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttt 40027236  T
Q  164 tattgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccc 235  Q
    | |||||||||| ||||| ||| ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  40027237 tgttgcattttttgtcctaccctccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 40027308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 66 - 232
Target Start/End: Original strand, 22374319 - 22374485
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||     
T  22374319 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 22374418  T
Q  166 ttgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagaccta 232  Q
    |||||||||||||||| ||||||||||||||||||||||||| | |||||||| |||||||||||||    
T  22374419 ttgcatttttcgtcctaccccccattttattctccaaaaacgcaaagaaatgatagttttagaccta 22374485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 70 - 235
Target Start/End: Complemental strand, 40815887 - 40815722
Alignment:
Q  70 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattgc 169  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||||||||| |||||||||||||||||| ||||    
T  40815887 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtaatgcccttttaaaacagaacaaaacggcccttcaattatcatttttgttgc 40815788  T
Q  170 atttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccc 235  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  40815787 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 40815722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 62 - 235
Target Start/End: Original strand, 43058328 - 43058501
Alignment:
Q  62 tataaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 161  Q
    |||| |||||||||||||||||| |||||||||||||||| |||||| ||| |||||||||| |||||||||||||||||||||||||||||||||||||    
T  43058328 tatatggcttaattacacttttgatcctcgtgttttggccaactcactaaactggtcctgcctttttaaaacagaacaaaacggtccttcaattatcatt 43058427  T
Q  162 tttattgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccc 235  Q
    ||| ||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43058428 tttgttgcatttttcgttctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccc 43058501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 66 - 235
Target Start/End: Complemental strand, 18451377 - 18451208
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 165  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||  ||||||||| ||||||||||     
T  18451377 aggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacagaacaaaatagtccttcaaatatcatttttg 18451278  T
Q  166 ttgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccc 235  Q
    ||||||||||| |||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  18451277 ttgcatttttcttcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 18451208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 64 - 232
Target Start/End: Original strand, 26538094 - 26538262
Alignment:
Q  64 taaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 163  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||| |||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  26538094 taaggcttaattacacttttggtcctcgtgttttggcttactcacgaaactggttctgcccttttaaaacagaacaaagcggtccttcaattatcatttt 26538193  T
Q  164 tattgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagaccta 232  Q
    | |||||||||||||||| ||||||||||||||||||||||||  |||||||| |||||||||||||||    
T  26538194 tgttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaataacagttttagaccta 26538262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 66 - 235
Target Start/End: Complemental strand, 26538625 - 26538455
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||     
T  26538625 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccctcttaaaacagaacaaaacggtccttcaattatcatttttg 26538526  T
Q  166 ttgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttagacctaccc 235  Q
    |||||||||||||||| ||||||||||| |  | ||| ||||| |||||||||||||||||||||||||||    
T  26538525 ttgcatttttcgtcctaccccccattttcaaaccccagaaacgcagagaaatgacagttttagacctaccc 26538455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 70 - 235
Target Start/End: Complemental strand, 8425902 - 8425737
Alignment:
Q  70 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattgc 169  Q
    ||||||||||||||||| || ||||||||| |||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| ||||    
T  8425902 ttaattacacttttggttcttgtgttttggtctactcacgaaattggtcctgcccttttaaaatagaacaaaactgtccttcaattatcatttttgttgc 8425803  T
Q  170 atttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccc 235  Q
    |||||||||| | ||||| ||||||||||||||||||| |||||||||||||||||||||||||||    
T  8425802 atttttcgtcttacccccaattttattctccaaaaacgcagagaaatgacagttttagacctaccc 8425737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 70 - 235
Target Start/End: Original strand, 14432145 - 14432310
Alignment:
Q  70 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattgc 169  Q
    |||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||||||||| | |||||||||||||||||| |||||||||| ||||    
T  14432145 ttaattacacttttggtcctcgtgttttggcctactcatgaaactggtcttgcccttttaaaatataacaaaacggtccttcaactatcatttttgttgc 14432244  T
Q  170 atttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccc 235  Q
    |||||| ||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  14432245 atttttggtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 14432310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 67 - 235
Target Start/End: Original strand, 28616613 - 28616782
Alignment:
Q  67 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttat 166  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| |    
T  28616613 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 28616712  T
Q  167 tgcatttttcgtcctgccccccattttattctcc-aaaaacgtagagaaatgacagttttagacctaccc 235  Q
    |||| |||||||||| |||||||||||||| ||| ||||||| ||||||||  |||||||||||||||||    
T  28616713 tgcaattttcgtcctaccccccattttattatccaaaaaacgcagagaaatagcagttttagacctaccc 28616782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 65 - 223
Target Start/End: Original strand, 7446340 - 7446497
Alignment:
Q  65 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 164  Q
    |||||||||||||||||||| |||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  7446340 aaggcttaattacacttttgatcctcgtgttttggtctactcatgaaattggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 7446439  T
Q  165 attgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagtt 223  Q
    ||||||||||||||| |  |||||||||||||||||||||||| |||||||||||||||    
T  7446440 attgcatttttcgtcat-acccccattttattctccaaaaacgcagagaaatgacagtt 7446497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 73 - 235
Target Start/End: Original strand, 3025472 - 3025633
Alignment:
Q  73 attacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattgcatt 172  Q
    |||||| ||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||| |||||||||| |||||||    
T  3025472 attacatttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacagaacaaaacggtccttcaagtatcatttttgttgcatt 3025571  T
Q  173 tttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccc 235  Q
    |||||||||  |||||||||||||||| ||||||| | |||||||||||||||||||||||||    
T  3025572 tttcgtcct-acccccattttattctcaaaaaacgcaaagaaatgacagttttagacctaccc 3025633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 65 - 207
Target Start/End: Original strand, 20444747 - 20444889
Alignment:
Q  65 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 164  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  20444747 aaggcttaattacacttttggtcctcgtgttttggccaactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcagttatcattttt 20444846  T
Q  165 attgcatttttcgtcctgccccccattttattctccaaaaacg 207  Q
     ||||| |||||||||| ||||||||||||| |||||||||||    
T  20444847 gttgcagttttcgtcctaccccccattttatcctccaaaaacg 20444889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 65 - 227
Target Start/End: Original strand, 18450828 - 18450991
Alignment:
Q  65 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 164  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  18450828 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtccagcccttttaaaacagaacaaaacggtccttcaattatcattttt 18450927  T
Q  165 attgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 227  Q
     |||||||||| ||||| || || ||||| |  ||||| ||||| |||||||||||||||||||    
T  18450928 tttgcatttttagtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 18450991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 66 - 227
Target Start/End: Complemental strand, 22374871 - 22374709
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||     
T  22374871 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 22374772  T
Q  166 ttgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 227  Q
    |||||||||||||||| || || ||||| |  ||| | ||| | |||||||||||||||||||    
T  22374771 ttgcatttttcgtcctacctcctattttcaaactctagaaatgcagagaaatgacagttttag 22374709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 65 - 227
Target Start/End: Complemental strand, 40027687 - 40027524
Alignment:
Q  65 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 164  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  40027687 aaggtttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtctttcaattatcattttt 40027588  T
Q  165 attgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 227  Q
     |||||||||||||||| || || ||||| |  ||||| ||||| || |||||| |||||||||    
T  40027587 gttgcatttttcgtcctacctcctattttcaaactccataaacgcagtgaaatggcagttttag 40027524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 66 - 227
Target Start/End: Complemental strand, 7446892 - 7446730
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 165  Q
    ||||||||||||| ||||| ||||||||||||| | ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||     
T  7446892 aggcttaattacatttttgatcctcgtgttttgccttactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 7446793  T
Q  166 ttgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 227  Q
    |||||||||||||||| || || ||||| |  ||||||||||| |||||||||||||||||||    
T  7446792 ttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 7446730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 68 - 207
Target Start/End: Complemental strand, 35781207 - 35781068
Alignment:
Q  68 gcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttatt 167  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||  ||||||||||||||||||| ||    
T  35781207 gcttaattacacttttgatcctcgtgttttggcctactcacgaaaatggtcatgcccttttaaaacagaacaaaactatccttcaattatcatttttgtt 35781108  T
Q  168 gcatttttcgtcctgccccccattttattctccaaaaacg 207  Q
    ||||||||||||||  |||||||||||| |||||||||||    
T  35781107 gcatttttcgtcctaacccccattttatcctccaaaaacg 35781068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 69 - 227
Target Start/End: Original strand, 40815347 - 40815506
Alignment:
Q  69 cttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattg 168  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||| ||||||||||||||||| |||    
T  40815347 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacataacaaaacggttcttcaattatcatttttgttg 40815446  T
Q  169 catttttcgtcctgcccccca-ttttattctccaaaaacgtagagaaatgacagttttag 227  Q
    ||||||||||||| || || | |||||  ||||| ||||| |||||||||||||||||||    
T  40815447 catttttcgtcctacctcctatttttaaactccagaaacgcagagaaatgacagttttag 40815506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 68 - 227
Target Start/End: Complemental strand, 239896 - 239736
Alignment:
Q  68 gcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttatt 167  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||    
T  239896 gcttagttacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaatggtccttcaattatcatttttgtt 239797  T
Q  168 gcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 227  Q
    || ||||||||| | || || ||||| |  ||||| ||||| ||||||||| |||||||||    
T  239796 gcgtttttcgtcatacctcctattttcaaactccagaaacgcagagaaatggcagttttag 239736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 67 - 207
Target Start/End: Original strand, 35779708 - 35779848
Alignment:
Q  67 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttat 166  Q
    |||||||||||||||||||||||||||||||| | ||||||||||| |||||||||| ||||||||||||||||||  |||||||||||||||||||| |    
T  35779708 ggcttaattacacttttggtcctcgtgttttgacatactcacgaaaatggtcctgccattttaaaacagaacaaaattgtccttcaattatcatttttgt 35779807  T
Q  167 tgcatttttcgtcctgccccccattttattctccaaaaacg 207  Q
    ||||||||| ||||| ||||||||||||| |||||||||||    
T  35779808 tgcattttttgtcctaccccccattttatcctccaaaaacg 35779848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 66 - 181
Target Start/End: Complemental strand, 1978655 - 1978540
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 165  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||     
T  1978655 aggcttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacagtccttcaattatcatttttg 1978556  T
Q  166 ttgcatttttcgtcct 181  Q
    |||||||||| |||||    
T  1978555 ttgcattttttgtcct 1978540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 66 - 207
Target Start/End: Complemental strand, 20440577 - 20440437
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 165  Q
    |||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| |||| |||||||||||     
T  20440577 aggcttaattacacttttggtcctcgtgttttggccaactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcagttatcatttttg 20440478  T
Q  166 ttgcatttttcgtcctgccccccattttattctccaaaaacg 207  Q
    ||||| ||||||||||  |||||| ||||| |||||||||||    
T  20440477 ttgcagttttcgtcctatccccca-tttatcctccaaaaacg 20440437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 66 - 181
Target Start/End: Complemental strand, 11091066 - 11090951
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| ||     
T  11091066 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattattg 11090967  T
Q  166 ttgcatttttcgtcct 181  Q
    ||| ||||||||||||    
T  11090966 ttgtatttttcgtcct 11090951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 65 - 227
Target Start/End: Complemental strand, 28617161 - 28616998
Alignment:
Q  65 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 164  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| |||||||||||||||||||| |||||||||||||||||||||    
T  28617161 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggttctgtccttttaaaacagaacaaaatggtccttcaattatcattttt 28617062  T
Q  165 attgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 227  Q
     |||||||||||||| | || || ||||| |  ||||| ||||| ||||||||  |||||||||    
T  28617061 gttgcatttttcgtcttacctcctattttcaaactccagaaacgcagagaaatagcagttttag 28616998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 66 - 227
Target Start/End: Complemental strand, 43058878 - 43058717
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 165  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| |||||||||||||||| ||||     
T  43058878 aggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacagaacaaaatggtccttcaattatca-ttttg 43058780  T
Q  166 ttgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 227  Q
    |||||||||||||||| || || ||||| |  ||||| ||||| ||||||||| |||||||||    
T  43058779 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 43058717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 66 - 181
Target Start/End: Complemental strand, 28847241 - 28847126
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 165  Q
    ||||||||||||| |||||||||||||||||||| |||||||||||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||     
T  28847241 aggcttaattacatttttggtcctcgtgttttggtctactcacgaaactggtcctgctcttttaaaacaaaacaaaacggtccttcaattatcatttttg 28847142  T
Q  166 ttgcatttttcgtcct 181  Q
    ||||||||||||||||    
T  28847141 ttgcatttttcgtcct 28847126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 67 - 226
Target Start/End: Complemental strand, 3026006 - 3025848
Alignment:
Q  67 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttat 166  Q
    |||||||||||| ||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||||||||||||||||||||| |||||| |    
T  3026006 ggcttaattaca-ttttggtcctcgtgttttggcttactcacgaaattggttctgcccttttaaaaca-aacaaaacggtccttcaattattatttttgt 3025909  T
Q  167 tgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagtttta 226  Q
    ||||||||||||||| || || ||||| |  ||||| ||| | ||||||||||||||||||    
T  3025908 tgcatttttcgtcctacctcctattttcaaactccagaaatgcagagaaatgacagtttta 3025848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 69 - 207
Target Start/End: Original strand, 8972239 - 8972377
Alignment:
Q  69 cttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattg 168  Q
    |||||||||||||||||||||||||||||||| | ||||||||| ||||| |||||||| ||||||||||||||  ||| |||||||||||||||| |||    
T  8972239 cttaattacacttttggtcctcgtgttttggcatgctcacgaaaatggtcatgccctttcaaaacagaacaaaattgtcattcaattatcatttttgttg 8972338  T
Q  169 catttttcgtcctgccccccattttattctccaaaaacg 207  Q
    |||||||||| || ||||| ||||||| |||||||||||    
T  8972339 catttttcgttctaccccctattttatcctccaaaaacg 8972377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 70 - 226
Target Start/End: Original strand, 8425358 - 8425514
Alignment:
Q  70 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattgc 169  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||| | || |||||||||||||||||||||| ||||||||||||||| | ||||    
T  8425358 ttaattacacttttggtccttgtgttttggcctactcacgaaattggtcttacctttttaaaacagaacaaaacggt-cttcaattatcatttgtgttgc 8425456  T
Q  170 atttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagtttta 226  Q
    |||||||||||| || || ||||| |  ||||| ||| | ||||||||||||||||||    
T  8425457 atttttcgtcctacctcctattttcaaactccagaaatgcagagaaatgacagtttta 8425514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 69 - 207
Target Start/End: Original strand, 15551501 - 15551639
Alignment:
Q  69 cttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattg 168  Q
    |||||||||||||||||||||||||||||||  ||||||||||| ||||| |||| |||||||||| |||||||  |||||||| ||||||||||| |||    
T  15551501 cttaattacacttttggtcctcgtgttttggtttactcacgaaaatggtcatgcctttttaaaacaaaacaaaaatgtccttcagttatcatttttgttg 15551600  T
Q  169 catttttcgtcctgccccccattttattctccaaaaacg 207  Q
    ||||||||||||  ||| ||||||||| |||||||||||    
T  15551601 catttttcgtccaaccctccattttatcctccaaaaacg 15551639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 69 - 227
Target Start/End: Complemental strand, 14432684 - 14432525
Alignment:
Q  69 cttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattg 168  Q
    |||||||||| |||||||||||||||||||||||||||| |||| ||||| |||| ||||||||||||| |||| ||| |||||||||| |||||| |||    
T  14432684 cttaattacatttttggtcctcgtgttttggcctactcatgaaactggtcatgccattttaaaacagaataaaatggttcttcaattattatttttgttg 14432585  T
Q  169 catttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 227  Q
    |||||||| |||| || || ||||| |  ||| | ||||| |||||||||||||||||||    
T  14432584 catttttcatcctacctcctattttcaaactctagaaacgcagagaaatgacagttttag 14432525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 69 - 208
Target Start/End: Complemental strand, 15552596 - 15552458
Alignment:
Q  69 cttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattg 168  Q
    ||||||||||||||||||| |  ||||||||||||||||||||| || ||| ||||||||||||||||||||||  ||| |||||||||||||||| |||    
T  15552596 cttaattacacttttggtcataatgttttggcctactcacgaaaatgatcc-gcccttttaaaacagaacaaaattgtcattcaattatcatttttgttg 15552498  T
Q  169 catttttcgtcctgccccccattttattctccaaaaacgt 208  Q
     |||||||||||| ||| |||||||   ||||||||||||    
T  15552497 tatttttcgtcctaccctccattttgccctccaaaaacgt 15552458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 61 - 235
Target Start/End: Complemental strand, 28143581 - 28143408
Alignment:
Q  61 ttataaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcat 160  Q
    |||| |||||||||| |||||||||||||||  ||||| ||  ||||||||| ||||||||||  ||| |||  ||||||||  |||| | || ||||||    
T  28143581 ttattaggcttaatttcacttttggtcctcgcattttgaccagctcacgaaaatggtcctgcctctttcaaatcgaacaaaatcgtccctaaactatcat 28143482  T
Q  161 ttttattgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccc 235  Q
     ||| ||||| |||| ||||| |  || |||||   ||||| ||||| |||||||||||||||||||||||||||    
T  28143481 gttt-ttgcagttttagtcctacgtcctattttcaactccagaaacgcagagaaatgacagttttagacctaccc 28143408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 65 - 209
Target Start/End: Complemental strand, 3824256 - 3824112
Alignment:
Q  65 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 164  Q
    |||| ||||||| |||||||||| |||  ||||  || |||||||||||||||| ||||||||| |||  ||||||||| || | |    |||||| |||    
T  3824256 aaggtttaattatacttttggtcatcgcattttaaccaactcacgaaattggtcatgccctttttaaatcgaacaaaacagttcatatgctatcatgttt 3824157  T
Q  165 attgcatttttcgtcctgccccccattttattctccaaaaacgta 209  Q
     ||||| |||| || ||  |||||||||||| |||||||||||||    
T  3824156 tttgcaattttagttctaacccccattttatcctccaaaaacgta 3824112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 141
Target Start/End: Original strand, 3822924 - 3822995
Alignment:
Q  70 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaa 141  Q
    ||||||||||||||||||||||  ||||  || ||||| ||||||| |||||||||||| |||| |||||||    
T  3822924 ttaattacacttttggtcctcgcattttaaccaactcatgaaattgatcctgccctttttaaaccgaacaaa 3822995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 67 - 118
Target Start/End: Original strand, 4355755 - 4355806
Alignment:
Q  67 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtc 118  Q
    ||||||||||||||||||||||| |  ||||| |||||||||||||||||||    
T  4355755 ggcttaattacacttttggtccttgcattttgacctactcacgaaattggtc 4355806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 65 - 120
Target Start/End: Complemental strand, 42192791 - 42192736
Alignment:
Q  65 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcct 120  Q
    |||||||||||||||||||||||||||  ||||| || |||||||||| |||||||    
T  42192791 aaggcttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtcct 42192736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 66 - 120
Target Start/End: Complemental strand, 25336147 - 25336093
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcct 120  Q
    |||||||||||||||||||||||| |  ||||| || ||||||||||||||||||    
T  25336147 aggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcct 25336093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 66 - 120
Target Start/End: Original strand, 38007949 - 38008003
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcct 120  Q
    |||||||||||||||||||||||| |  ||||| || ||||||||||||||||||    
T  38007949 aggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcct 38008003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 66 - 120
Target Start/End: Complemental strand, 43216256 - 43216202
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcct 120  Q
    |||||||||||||||||| ||||| | |||||| || ||||||||||||||||||    
T  43216256 aggcttaattacacttttagtccttgcgttttgaccaactcacgaaattggtcct 43216202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 120
Target Start/End: Complemental strand, 6949990 - 6949937
Alignment:
Q  67 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcct 120  Q
    ||||||||||||||||||||||| |  ||||| || ||||||||||||||||||    
T  6949990 ggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcct 6949937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 225
Target Start/End: Complemental strand, 31797325 - 31797166
Alignment:
Q  65 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 164  Q
    ||||||||||||||||||||||||||   ||||| ||  ||||||||| ||||| ||||  ||| |||  ||||||||| |||| | || ||| || |||    
T  31797325 aaggcttaattacacttttggtcctcacattttgaccagctcacgaaaatggtcatgcctctttcaaatcgaacaaaaccgtccctaaactat-atgttt 31797227  T
Q  165 attgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagtttt 225  Q
     ||||| |||| ||||| || || |||||   ||| | ||||| |||||||||||||||||    
T  31797226 tttgcagttttagtcctacctcctattttcaactctagaaacgcagagaaatgacagtttt 31797166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 120
Target Start/End: Original strand, 32418156 - 32418212
Alignment:
Q  64 taaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcct 120  Q
    |||||||||||||||||| ||||||| |  ||||| || ||||||||||||||||||    
T  32418156 taaggcttaattacacttatggtccttgcattttgaccaactcacgaaattggtcct 32418212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 120
Target Start/End: Complemental strand, 20128284 - 20128230
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcct 120  Q
    |||||||||||||||||||||||| |  ||||  || ||||||||||||||||||    
T  20128284 aggcttaattacacttttggtccttgcatttttaccaactcacgaaattggtcct 20128230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 67 - 120
Target Start/End: Original strand, 42192240 - 42192293
Alignment:
Q  67 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcct 120  Q
    ||||||||||||||||||||||||   ||||| || |||||||||| |||||||    
T  42192240 ggcttaattacacttttggtcctcacattttgaccaactcacgaaaatggtcct 42192293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 118
Target Start/End: Complemental strand, 44220193 - 44220140
Alignment:
Q  65 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtc 118  Q
    ||||||||||||||||||| |||||||  ||||| || |||||||||| |||||    
T  44220193 aaggcttaattacactttttgtcctcgcattttgaccaactcacgaaaatggtc 44220140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 142
Target Start/End: Original strand, 62956 - 63032
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaa 142  Q
    |||||||||||||||| |||||||    ||||| || |||||||||| ||||||| || ||||||||  ||||||||    
T  62956 aggcttaattacacttatggtccttccattttgaccaactcacgaaaatggtcctacctttttaaaatcgaacaaaa 63032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 128
Target Start/End: Original strand, 9747518 - 9747582
Alignment:
Q  64 taaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgccctttt 128  Q
    |||||||||||| |||||||| ||||||  ||||| | | |||||||||||||| ||||| ||||    
T  9747518 taaggcttaattgcacttttgatcctcgcattttgacatgctcacgaaattggttctgccttttt 9747582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 120
Target Start/End: Complemental strand, 16953479 - 16953427
Alignment:
Q  68 gcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcct 120  Q
    |||||||||||||||||||||| |  ||||| || ||||| ||||||||||||    
T  16953479 gcttaattacacttttggtccttgcattttgaccaactcatgaaattggtcct 16953427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 145; Significance: 2e-76; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 66 - 234
Target Start/End: Complemental strand, 19176836 - 19176668
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 165  Q
    |||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||     
T  19176836 aggcttaattacacttttggtcctcgtgttttggcctactcacgtaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 19176737  T
Q  166 ttgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctacc 234  Q
    |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  19176736 ttgcatttttcgtcctaccccccattttattctccaaaaacgcagacaaatgacagttttagacctacc 19176668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 66 - 235
Target Start/End: Original strand, 41681133 - 41681301
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||     
T  41681133 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 41681232  T
Q  166 ttgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccc 235  Q
    ||||||||||||||||  |||||||||||||||||||||||| |||||||||||||||||| || |||||    
T  41681233 ttgcatttttcgtcct-acccccattttattctccaaaaacgcagagaaatgacagttttaaacataccc 41681301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 66 - 234
Target Start/End: Original strand, 31133219 - 31133387
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 165  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| |||||| |||||||||||||| |||||||| ||||||||| ||||||||||     
T  31133219 aggcttaattacacttttggtcctcgtgttttgccctactcacgaaactggtcccgcccttttaaaacaaaacaaaacagtccttcaagtatcatttttg 31133318  T
Q  166 ttgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctacc 234  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31133319 ttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacc 31133387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 66 - 235
Target Start/End: Original strand, 12571862 - 12572032
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||| || |||||||||||||||||||||||||| ||||||||||||||||     
T  12571862 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggttctacccttttaaaacagaacaaaacggtcattcaattatcatttttg 12571961  T
Q  166 ttgcatttttcgtcct-gccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccc 235  Q
    ||||||||||||||||  ||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  12571962 ttgcatttttcgtcctaaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 12572032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 65 - 235
Target Start/End: Complemental strand, 9930204 - 9930034
Alignment:
Q  65 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 164  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| ||||||||| |||||||||| ||||||||||    
T  9930204 aaggcttaattacacttttggtcctcgtattttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaatggtccttcaactatcattttt 9930105  T
Q  165 attgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccc 235  Q
     |||||||||||||||| |||||||||||||||||||||| || |||||||||| ||||||||||||||||    
T  9930104 gttgcatttttcgtcctaccccccattttattctccaaaagcgcagagaaatgatagttttagacctaccc 9930034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 66 - 235
Target Start/End: Original strand, 11656454 - 11656624
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||||||||||||||||||||| |||||||     
T  11656454 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaactgaacaaaacggtccttcaattaccatttttg 11656553  T
Q  166 ttgcatttttcgtcctgccccccattttattctcc-aaaaacgtagagaaatgacagttttagacctaccc 235  Q
    |||||||||||||||| |||||||||||||||||| ||||||| ||||||||| |||||||||||||||||    
T  11656554 ttgcatttttcgtcctaccccccattttattctccaaaaaacgcagagaaatggcagttttagacctaccc 11656624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 65 - 235
Target Start/End: Original strand, 33328156 - 33328326
Alignment:
Q  65 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 164  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||||||||||||||||| ||||||||||    
T  33328156 aaggtttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaacagaacaaaacggtccttcaagtatcattttt 33328255  T
Q  165 attgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccc 235  Q
     |||||||||||||||| ||| | ||||||||||||||||||| | |||||||||||||||||||||||||    
T  33328256 gttgcatttttcgtcctaccctcgattttattctccaaaaacgcaaagaaatgacagttttagacctaccc 33328326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 66 - 235
Target Start/End: Complemental strand, 44831791 - 44831622
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 165  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||||||||  ||||||||||||||||     
T  44831791 aggcttaataacacttttggtcctcgtgttttggcatactcacgaaactggtcctgctcttttaaaacagaacaaaacggttattcaattatcatttttg 44831692  T
Q  166 ttgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccc 235  Q
    |||||||||| ||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  44831691 ttgcatttttggtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccc 44831622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 71 - 235
Target Start/End: Original strand, 13224645 - 13224808
Alignment:
Q  71 taattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattgca 170  Q
    ||||||||||||||||| |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||  ||||||||||||||||||| ||| |    
T  13224645 taattacacttttggtcttcgtgttttggcctactcacgaaactggtc-tgcccttttaaaacagaacaaaacaatccttcaattatcatttttgttgaa 13224743  T
Q  171 tttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccc 235  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  13224744 tttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 13224808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 58 - 227
Target Start/End: Original strand, 44831238 - 44831408
Alignment:
Q  58 taattataaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattat 157  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  44831238 taattttaaggcttaattacacttttggtcctcatgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttccattat 44831337  T
Q  158 catttttattgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 227  Q
    ||||||| |||||||||||||||| || || ||||| |  ||||| ||||| |||||||||| ||||||||    
T  44831338 catttttgttgcatttttcgtcctacctcctattttcaaactccataaacgcagagaaatgatagttttag 44831408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 67 - 234
Target Start/End: Complemental strand, 9178180 - 9178014
Alignment:
Q  67 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttat 166  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || || |||||| ||||||||||||||||||||||||||| |||||||||| |    
T  9178180 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgccctcttaaaacagaacaaaacggtccttcaagtatcatttttgt 9178081  T
Q  167 tgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctacc 234  Q
    |||||||||| | ||  |||||||||||||||| ||||||| |||||||||||| |||||||||||||    
T  9178080 tgcatttttcat-cttacccccattttattctcaaaaaacgcagagaaatgacaattttagacctacc 9178014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 65 - 227
Target Start/End: Complemental strand, 13225186 - 13225023
Alignment:
Q  65 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 164  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  13225186 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcattttt 13225087  T
Q  165 attgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 227  Q
     |||||||||||||||| || || ||||| |  ||||| ||||| ||||||||| |||||||||    
T  13225086 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 13225023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 66 - 227
Target Start/End: Original strand, 19176289 - 19176451
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||     
T  19176289 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 19176388  T
Q  166 ttgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 227  Q
    |||||||||||||||  || || ||||| |  ||||| ||||| |||||||||||| ||||||    
T  19176389 ttgcatttttcgtccgacctcctattttcaaactccagaaacgcagagaaatgacaattttag 19176451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 65 - 227
Target Start/End: Complemental strand, 11657004 - 11656841
Alignment:
Q  65 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 164  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||| | |||||||||||||||||||| |||||||||||||||||||||    
T  11657004 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcccggccttttaaaacagaacaaaatggtccttcaattatcattttt 11656905  T
Q  165 attgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 227  Q
     |||||||||||||||| || || ||||| |  ||||| ||||| ||||||||  |||||||||    
T  11656904 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatagcagttttag 11656841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 70 - 227
Target Start/End: Original strand, 9928912 - 9929070
Alignment:
Q  70 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattgc 169  Q
    |||||||||||||||||||||||||||||  |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  9928912 ttaattacacttttggtcctcgtgttttgatctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 9929011  T
Q  170 atttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 227  Q
    |||||||||||| || ||  |||| |  ||||| ||||| ||||||||| |||||||||    
T  9929012 atttttcgtcctacctccttttttcaaactccagaaacgcagagaaatgtcagttttag 9929070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 67 - 181
Target Start/End: Complemental strand, 41681679 - 41681565
Alignment:
Q  67 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttat 166  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| |    
T  41681679 ggcttaattacacttttggtcctcgtgttttggcctaatcacgaaactggtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgt 41681580  T
Q  167 tgcatttttcgtcct 181  Q
    |||||||||||||||    
T  41681579 tgcatttttcgtcct 41681565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 68 - 179
Target Start/End: Complemental strand, 31133764 - 31133653
Alignment:
Q  68 gcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttatt 167  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| |||||| ||    
T  31133764 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattattatttttgtt 31133665  T
Q  168 gcatttttcgtc 179  Q
    ||||||||||||    
T  31133664 gcatttttcgtc 31133653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 66 - 181
Target Start/End: Complemental strand, 34541094 - 34540979
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||| |||||||||||||||||||||     
T  34541094 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacataacaaaatggtccttcaattatcatttttg 34540995  T
Q  166 ttgcatttttcgtcct 181  Q
    ||||||||||||||||    
T  34540994 ttgcatttttcgtcct 34540979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 70 - 235
Target Start/End: Complemental strand, 4630328 - 4630169
Alignment:
Q  70 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattgc 169  Q
    ||||||||||||||| || ||||||||||| ||||||||||||||||||||||  ||||||||||||| | ||||||||||||||||      || ||||    
T  4630328 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgcatttttaaaacagaatacaacggtccttcaatta------ttgttgc 4630235  T
Q  170 atttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccc 235  Q
    ||||||| |||| ||||||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  4630234 atttttcatcctaccccccattttattctccaaaaacgcagaaaaatgacagttttagacctaccc 4630169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 66 - 227
Target Start/End: Original strand, 33742921 - 33743082
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 165  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||||||||| |||||||| ||||||||||||||||     
T  33742921 aggcttaattacacttttggtcctcgtgttttgacctactcacgaaactggtcttgcccttttaaaacagaac-aaacggtctttcaattatcatttttg 33743019  T
Q  166 ttgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 227  Q
     ||||||||||||||| || || ||||| || | ||| ||||| |||||||||||||||||||    
T  33743020 atgcatttttcgtcctacctcctattttcataccccagaaacgcagagaaatgacagttttag 33743082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 70 - 227
Target Start/End: Complemental strand, 12572393 - 12572235
Alignment:
Q  70 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattgc 169  Q
    |||||||||||||||||||||||||||||| |||||||||||| | ||| ||| ||||||||||||||||||||||||||||||||||||||||| ||||    
T  12572393 ttaattacacttttggtcctcgtgttttggtctactcacgaaactagtcatgctcttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 12572294  T
Q  170 atttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 227  Q
    |||||||||||| || || ||||| |  ||||| ||||| ||||||||  |||||||||    
T  12572293 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaattgcagttttag 12572235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 113 - 233
Target Start/End: Complemental strand, 33743418 - 33743298
Alignment:
Q  113 ttggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattgcatttttcgtcctgccccccattttattctccaaaaacgtagag 212  Q
    ||||| ||||| ||||||||||||||||||||||  |||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||||    
T  33743418 ttggttctgcctttttaaaacagaacaaaacggtttttcaattatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagag 33743319  T
Q  213 aaatgacagttttagacctac 233  Q
    |||| ||||||||||||||||    
T  33743318 aaataacagttttagacctac 33743298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 69 - 227
Target Start/End: Complemental strand, 33328683 - 33328524
Alignment:
Q  69 cttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattg 168  Q
    |||||||| |||||||||||||||||||| |||||||||||||| | ||| ||| ||||||||||| ||||||||||||||||||||||||||||| |||    
T  33328683 cttaattagacttttggtcctcgtgttttagcctactcacgaaactagtcatgctcttttaaaacataacaaaacggtccttcaattatcatttttgttg 33328584  T
Q  169 catttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 227  Q
    ||||||||||||  || |||||||| |  ||||| ||||| ||||||||| |||||||||    
T  33328583 catttttcgtcccacctcccattttcaaactccagaaacgcagagaaatggcagttttag 33328524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 66 - 175
Target Start/End: Complemental strand, 11337068 - 11336959
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 165  Q
    |||||||||||||||||||||| |||||||||||| |||||||||||||||||| ||||||||||||||||| ||||||||| ||||||||||||||||     
T  11337068 aggcttaattacacttttggtcttcgtgttttggcttactcacgaaattggtcccgcccttttaaaacagaataaaacggtctttcaattatcatttttg 11336969  T
Q  166 ttgcattttt 175  Q
    ||||||||||    
T  11336968 ttgcattttt 11336959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 66 - 179
Target Start/End: Original strand, 4629796 - 4629909
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 165  Q
    |||||||||| |||||||  | ||||||||||||| || |||||||| ||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  4629796 aggcttaattgcacttttaattctcgtgttttggcatattcacgaaactggtcctgcccttttaaaatagaacaaaacggtcattcaattatcattttta 4629895  T
Q  166 ttgcatttttcgtc 179  Q
    ||||||||||||||    
T  4629896 ttgcatttttcgtc 4629909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 70 - 205
Target Start/End: Original strand, 10918129 - 10918264
Alignment:
Q  70 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattgc 169  Q
    ||||||||| |||| ||||||||||||||  |||||||||||||||||| ||||   |||||||||| |||||  ||||||||| |||||||||| ||||    
T  10918129 ttaattacattttttgtcctcgtgttttgatctactcacgaaattggtcttgcctccttaaaacagagcaaaattgtccttcaaatatcatttttgttgc 10918228  T
Q  170 atttttcgtcctgccccccattttattctccaaaaa 205  Q
    ||||||| || | ||||||||||||| |||||||||    
T  10918229 atttttcatcataccccccattttatcctccaaaaa 10918264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 65 - 207
Target Start/End: Complemental strand, 8074098 - 8073957
Alignment:
Q  65 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 164  Q
    |||||||| ||| |||||||||||||||||||||||||| |||||||| || || || ||||||||||||||||||||   |||||||||||||| ||||    
T  8074098 aaggcttagttatacttttggtcctcgtgttttggcctattcacgaaaatgatcatgtccttttaaaacagaacaaaatcatccttcaattatca-tttt 8074000  T
Q  165 attgcatttttcgtcctgccccccattttattctccaaaaacg 207  Q
     ||||||||| ||||    |||||||||||  |||||||||||    
T  8073999 gttgcattttacgtcaaaacccccattttaccctccaaaaacg 8073957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 146 - 207
Target Start/End: Original strand, 43958264 - 43958325
Alignment:
Q  146 tccttcaattatcatttttattgcatttttcgtcctgccccccattttattctccaaaaacg 207  Q
    ||||||||||||||||||| |||||||||||||||| ||| | |||||||||||||||||||    
T  43958264 tccttcaattatcatttttgttgcatttttcgtcctaccctctattttattctccaaaaacg 43958325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 64 - 107
Target Start/End: Complemental strand, 10919734 - 10919691
Alignment:
Q  64 taaggcttaattacacttttggtcctcgtgttttggcctactca 107  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||    
T  10919734 taaggcttaattatacttttggtcctcgtgttttgacctactca 10919691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 66 - 100
Target Start/End: Original strand, 9177666 - 9177700
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggc 100  Q
    |||||||||||||||||||||||||||||||||||    
T  9177666 aggcttaattacacttttggtcctcgtgttttggc 9177700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 66 - 120
Target Start/End: Original strand, 15255852 - 15255906
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcct 120  Q
    |||||||||||||||||||||||| |  ||||| || ||||||||||||||||||    
T  15255852 aggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcct 15255906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 120
Target Start/End: Complemental strand, 28254971 - 28254919
Alignment:
Q  68 gcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcct 120  Q
    |||||||||||||||||||||| |  ||||| || ||||||||||||||||||    
T  28254971 gcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcct 28254919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 142
Target Start/End: Complemental strand, 35427359 - 35427283
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaa 142  Q
    ||||||||||||||||||||||||||  ||||| || |||||||||| |||| || ||  ||| |||| ||||||||    
T  35427359 aggcttaattacacttttggtcctcgcattttgaccaactcacgaaaatggttctacctcttttaaaccgaacaaaa 35427283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 118
Target Start/End: Original strand, 599529 - 599583
Alignment:
Q  64 taaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtc 118  Q
    ||||||||||||||| |||||||||| |  ||||| || ||||||||||||||||    
T  599529 taaggcttaattacatttttggtccttgcattttgaccaactcacgaaattggtc 599583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 120
Target Start/End: Complemental strand, 6115658 - 6115604
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcct 120  Q
    ||||||||||| |||||||||||| || ||||| || |||| |||||||||||||    
T  6115658 aggcttaattatacttttggtccttgtattttgaccaactcgcgaaattggtcct 6115604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 115
Target Start/End: Original strand, 43958211 - 43958257
Alignment:
Q  69 cttaattacacttttggtcctcgtgttttggcctactcacgaaattg 115  Q
    |||||||| |||||||||| ||||||||||  |||||||||||||||    
T  43958211 cttaattatacttttggtcttcgtgttttgatctactcacgaaattg 43958257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 67 - 120
Target Start/End: Original strand, 9796726 - 9796779
Alignment:
Q  67 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcct 120  Q
    ||||||||||||||||||||||| |  ||||| || |||||| |||||||||||    
T  9796726 ggcttaattacacttttggtccttgcattttgaccaactcacaaaattggtcct 9796779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 117
Target Start/End: Complemental strand, 28877437 - 28877385
Alignment:
Q  65 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggt 117  Q
    |||| ||||||||||||||||||||||  ||||| || |||||||||| ||||    
T  28877437 aaggtttaattacacttttggtcctcgcattttgaccaactcacgaaaatggt 28877385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951 (Bit Score: 142; Significance: 1e-74; HSPs: 2)
Name: scaffold0951
Description:

Target: scaffold0951; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 66 - 235
Target Start/End: Original strand, 1666 - 1835
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 165  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| | |||||||||||||||||||     
T  1666 aggcttaattacacttttggtcctcctgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatgttccttcaattatcatttttg 1765  T
Q  166 ttgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccc 235  Q
    |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  1766 ttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 1835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951; HSP #2
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 66 - 227
Target Start/End: Complemental strand, 2213 - 2051
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 165  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||     
T  2213 aggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 2114  T
Q  166 ttgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 227  Q
    |||||||||||||||| || || ||||| |  ||||| ||||| |||||||||| ||||||||    
T  2113 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgaaagttttag 2051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 138; Significance: 3e-72; HSPs: 2)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 66 - 235
Target Start/End: Complemental strand, 4753 - 4584
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 165  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||     
T  4753 aggcttaattacacttttggtcttcgtgttttggcatactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcctttaattatcatttttg 4654  T
Q  166 ttgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccc 235  Q
    |||||||||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  4653 ttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccc 4584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 106 - 227
Target Start/End: Original strand, 4242 - 4364
Alignment:
Q  106 cacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattgcatttttcgtcctgccccccatttt-attctccaaaa 204  Q
    ||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| || || || ||||| |  ||| ||||    
T  4242 cacgaaactggtcctgcccttttaaaacaaaacaaaacggtccttcaattatcatttttgttgcatttttcgttctacctcctattttcaaactctaaaa 4341  T
Q  205 acgtagagaaatgacagttttag 227  Q
    | | |||||||||||||||||||    
T  4342 atgcagagaaatgacagttttag 4364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 136; Significance: 4e-71; HSPs: 4)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 64 - 235
Target Start/End: Original strand, 64299 - 64470
Alignment:
Q  64 taaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 163  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||| || ||||| |||||||||||||||||||||||||||||||||||||||||    
T  64299 taaggcttaattacacttttggtcctcgtgttttgacatactcacgaaactgatcctgaccttttaaaacagaacaaaacggtccttcaattatcatttt 64398  T
Q  164 tattgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccc 235  Q
    | |||||||||||||| | ||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  64399 tgttgcatttttcgtcataccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 64470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 65 - 181
Target Start/End: Complemental strand, 64852 - 64736
Alignment:
Q  65 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 164  Q
    |||| ||||||||||||||||||||||||||||||| ||||||||||| |||||| |||||||||||||||||||||||||||||| |||||||||||||    
T  64852 aaggtttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcccgcccttttaaaacagaacaaaacggtcctttaattatcattttt 64753  T
Q  165 attgcatttttcgtcct 181  Q
     ||||||||||||||||    
T  64752 gttgcatttttcgtcct 64736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 64 - 235
Target Start/End: Complemental strand, 205916 - 205746
Alignment:
Q  64 taaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 163  Q
    |||| ||||||||||||||| ||||||   ||||| || |||||||||| ||||||||||  ||| |||  ||||||||| |||| | || |||||| ||    
T  205916 taagtcttaattacacttttagtcctcacattttgaccaactcacgaaaatggtcctgcctctttcaaatcgaacaaaaccgtccctaaactatcatgtt 205817  T
Q  164 tattgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccc 235  Q
    | ||||| |||| ||||| |  || |||||   ||||||||||| ||||||||| |||||||||||||||||    
T  205816 t-ttgcagttttagtcctacgtcctattttcaactccaaaaacgcagagaaatggcagttttagacctaccc 205746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 64 - 164
Target Start/End: Complemental strand, 210886 - 210786
Alignment:
Q  64 taaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 163  Q
    |||||||||||||||||||||||||||   ||||| || ||||| |||| ||||||||||  ||| |||  ||||||||| |||| | || |||||||||    
T  210886 taaggcttaattacacttttggtcctcacattttgaccaactcatgaaaatggtcctgcctctttcaaatcgaacaaaaccgtccctaaactatcatttt 210787  T
Q  164 t 164  Q
    |    
T  210786 t 210786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 134; Significance: 7e-70; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 66 - 235
Target Start/End: Complemental strand, 134219 - 134050
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||||||| ||||||||||||| ||||||||||| |||||||     
T  134219 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactagtcatgcccttttaatacagaacaaaacgatccttcaattaacatttttg 134120  T
Q  166 ttgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccc 235  Q
    |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  134119 ttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 134050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223 (Bit Score: 127; Significance: 1e-65; HSPs: 2)
Name: scaffold1223
Description:

Target: scaffold1223; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 69 - 235
Target Start/End: Original strand, 755 - 920
Alignment:
Q  69 cttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattg 168  Q
    ||||||||||||||||||| |||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||| |||| |||    
T  755 cttaattacacttttggtcttcgtgttttggcctactcacgatactggtcctgcccttttaaaacagaacaaaacggtccttcaattatca-ttttgttg 853  T
Q  169 catttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccc 235  Q
    ||||||||||||| ||||||||||||||||||||||||| |||||||| |||||||||||| |||||    
T  854 catttttcgtcctaccccccattttattctccaaaaacgcagagaaataacagttttagacataccc 920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 67 - 235
Target Start/End: Complemental strand, 1286 - 1117
Alignment:
Q  67 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttat 166  Q
    ||||||||||||||||| |||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  1286 ggcttaattacacttttagtcctcgtgttttggcttactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 1187  T
Q  167 tgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttagacctaccc 235  Q
    ||||| ||||||||| || || ||||| |  | ||| ||||| ||| ||||| |||||||||||| ||||    
T  1186 tgcatctttcgtcctacctcctattttcaaaccccagaaacgcagaaaaatggcagttttagacccaccc 1117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 115; Significance: 1e-58; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 66 - 235
Target Start/End: Complemental strand, 42704 - 42536
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 165  Q
    ||||||||||| |||||||| ||||||||||||| ||||||| |||| || | |||||||||||||||||||||||||||||||||| |||||||||||     
T  42704 aggcttaattatacttttggncctcgtgttttggtctactcaggaaactgattctgcccttttaaaacagaacaaaacggtccttcagttatcatttttg 42605  T
Q  166 ttgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccc 235  Q
    || |||||||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  42604 tttcatttttcgtcct-acccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 42536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 62 - 235
Target Start/End: Original strand, 42164 - 42338
Alignment:
Q  62 tataaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 161  Q
    ||||||| |||||||||||||| || |||||||||||| ||| |||||||| || ||||||| ||||||||||||||||||||||| |||||||||||||    
T  42164 tataaggtttaattacacttttagttctcgtgttttggtctaatcacgaaactgatcctgccattttaaaacagaacaaaacggtcattcaattatcatt 42263  T
Q  162 tttattgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttagacctaccc 235  Q
    ||| |||||||||| ||| | || || ||||| |  || || ||||| |||||||||||||||||||||||||||    
T  42264 tttgttgcattttttgtcatacctcctattttcaaacttcagaaacgcagagaaatgacagttttagacctaccc 42338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 114; Significance: 6e-58; HSPs: 2)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 70 - 235
Target Start/End: Complemental strand, 10414 - 10250
Alignment:
Q  70 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattgc 169  Q
    |||||||||||||||||||||||||||||| |||||||||||| ||||  | ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  10414 ttaattacacttttggtcctcgtgttttggtctactcacgaaactggtgtttcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 10315  T
Q  170 atttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccc 235  Q
    ||||||||||||  ||||||||||||||||||||||   |||||||||||||||||| ||||||||    
T  10314 atttttcgtcct-acccccattttattctccaaaaattcagagaaatgacagttttaaacctaccc 10250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 70 - 174
Target Start/End: Original strand, 9935 - 10039
Alignment:
Q  70 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattgc 169  Q
    ||||||||| |||||||||||||||||| ||||| |||||||| || || ||||||||||| | ||||||||| |||||||||||||||| |||| || |    
T  9935 ttaattacatttttggtcctcgtgttttagcctattcacgaaactgatcttgcccttttaagatagaacaaaatggtccttcaattatcaattttgttac 10034  T
Q  170 atttt 174  Q
    |||||    
T  10035 atttt 10039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 110; Significance: 1e-55; HSPs: 2)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 86 - 235
Target Start/End: Original strand, 10640 - 10789
Alignment:
Q  86 tcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattgcatttttcgtcctgccc 185  Q
    |||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| |||||||||  |||||||||||||||| |||    
T  10640 tcctcgtgttttggcctactcatgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaagtatcattttcgttgcatttttcgtcctaccc 10739  T
Q  186 cccattttattctccaaaaacgtagagaaatgacagttttagacctaccc 235  Q
     ||||||||||||||||||| | ||||||||||||||||||||| |||||    
T  10740 tccattttattctccaaaaatgcagagaaatgacagttttagacgtaccc 10789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417; HSP #2
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 67 - 181
Target Start/End: Complemental strand, 11168 - 11054
Alignment:
Q  67 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttat 166  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| |    
T  11168 ggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacataacaaaacggtccttcaattatcatttttgt 11069  T
Q  167 tgcatttttcgtcct 181  Q
    |||||||||||||||    
T  11068 tgcatttttcgtcct 11054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 110; Significance: 1e-55; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 65 - 234
Target Start/End: Original strand, 18833 - 19001
Alignment:
Q  65 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 164  Q
    ||||||| |||||||||||||||||  ||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||| |||||||||||||||||    
T  18833 aaggcttcattacacttttggtccttctgttttggcctactcacgaaactggtcttgcccttttaaaacataacaaaacggtgcttcaattatcattttt 18932  T
Q  165 attgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctacc 234  Q
     ||||||||||| ||||  |||||||||||||||||||||||| |||||||| |||||||||||| ||||    
T  18933 gttgcatttttcatcct-acccccattttattctccaaaaacgcagagaaataacagttttagacttacc 19001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 67 - 164
Target Start/End: Complemental strand, 19166 - 19069
Alignment:
Q  67 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 164  Q
    |||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  19166 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaacttgtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 19069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 65 - 193
Target Start/End: Complemental strand, 28790 - 28662
Alignment:
Q  65 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 164  Q
    ||||| ||||||||||||||||| ||||||||||||||||| |||||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  28790 aaggcataattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaacggtcattcaattatcattttt 28691  T
Q  165 attgcatttttcgtcctgccccccatttt 193  Q
     ||||| |||||||||| |||||||||||    
T  28690 gttgcagttttcgtccttccccccatttt 28662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1585 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold1585
Description:

Target: scaffold1585; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 68 - 207
Target Start/End: Original strand, 568 - 707
Alignment:
Q  68 gcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttatt 167  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| || || |||||||||||||||||||||||| |||||||||||||||||||| ||    
T  568 gcttaattacacttttgatcctcgtgttttggcctactcacgaaaatgatcatgcccttttaaaacagaacaaaactgtccttcaattatcatttttgtt 667  T
Q  168 gcatttttcgtcctgccccccattttattctccaaaaacg 207  Q
    | ||||||||||   || ||||||| || |||||||||||    
T  668 gtatttttcgtctcacctcccatttgatcctccaaaaacg 707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 81; Significance: 3e-38; HSPs: 2)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 135 - 235
Target Start/End: Original strand, 16564 - 16664
Alignment:
Q  135 gaacaaaacggtccttcaattatcatttttattgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctacc 234  Q
    ||||||||||||||||||| |||||||||| |||||||||||||| | ||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  16564 gaacaaaacggtccttcaagtatcatttttgttgcatttttcgtcataccccccattttattctccaaaaacgcagagaaatgacagttttagacctacc 16663  T
Q  235 c 235  Q
    |    
T  16664 c 16664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 84 - 227
Target Start/End: Complemental strand, 17024 - 16880
Alignment:
Q  84 ggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattgcatttttcgtcctgc 183  Q
    ||||||||||||||| | ||||||||||| || ||| ||| ||||||||||||||||||  |||||||||||||||||||| |||||||||||||||| |    
T  17024 ggtcctcgtgttttgacttactcacgaaactgatcccgccattttaaaacagaacaaaattgtccttcaattatcatttttgttgcatttttcgtcctac 16925  T
Q  184 cccccatttt-attctccaaaaacgtagagaaatgacagttttag 227  Q
    | || ||||| |  ||||| ||||| |||||||| ||||||||||    
T  16924 ctcctattttcaaactccagaaacgcagagaaattacagttttag 16880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 74; Significance: 4e-34; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 70 - 207
Target Start/End: Complemental strand, 62000 - 61863
Alignment:
Q  70 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattgc 169  Q
    ||||||||||||||| |||||||||||||| |||||||||||| ||||||| ||||||||||| |||||||||   || ||||| |||||||||| ||      
T  62000 ttaattacacttttgatcctcgtgttttggtctactcacgaaaatggtcctacccttttaaaatagaacaaaatcatcattcaaatatcatttttgttat 61901  T
Q  170 atttttcgtcctgccccccattttattctccaaaaacg 207  Q
    |||||||||||| ||||||||||| | |||||||||||    
T  61900 atttttcgtcctaccccccattttgtcctccaaaaacg 61863  T

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Target: scaffold0057; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 66 - 141
Target Start/End: Original strand, 61027 - 61102
Alignment:
Q  66 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaa 141  Q
    |||||||| |||||||||| ||||||||||||||||||||||||||| || ||||||| |||||||| ||||||||    
T  61027 aggcttaagtacacttttgatcctcgtgttttggcctactcacgaaaatgatcctgccattttaaaatagaacaaa 61102  T

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Target: scaffold1696 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold1696
Description:

Target: scaffold1696; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 71 - 207
Target Start/End: Original strand, 454 - 588
Alignment:
Q  71 taattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattgca 170  Q
    |||||||| |||||||| |||||||||||||||||||||||| ||||| ||  ||||||||||| |||| ||  |||||||||||||||||||| |||||    
T  454 taattaca-ttttggtcttcgtgttttggcctactcacgaaaatggtcatgatcttttaaaacaaaacataatcgtccttcaattatcatttttgttgca 552  T
Q  171 tttttcgtcctgccccccattttattctccaaaaacg 207  Q
    |||||||||||  | |||||||||| ||| |||||||    
T  553 tttttcgtcct-acacccattttatcctcaaaaaacg 588  T

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Target: scaffold0076 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 70 - 170
Target Start/End: Complemental strand, 8551 - 8451
Alignment:
Q  70 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattgc 169  Q
    |||||||||||||||||| || |||||||| ||||| |||||| ||||||| ||||||||||||| | ||||||||||||||||||||||||||| ||||    
T  8551 ttaattacacttttggtcttcatgttttggtctacttacgaaactggtcctacccttttaaaacacagcaaaacggtccttcaattatcatttttgttgc 8452  T
Q  170 a 170  Q
    |    
T  8451 a 8451  T

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Target: scaffold0168 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 116 - 207
Target Start/End: Complemental strand, 7784 - 7693
Alignment:
Q  116 gtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattgcatttttcgtcctgccccccattttattctccaaaaacg 207  Q
    ||||| |||||||||||||||||||||| ||| |||| ||||||||||| |||||||||||||||| ||||| ||||||| |||||||||||    
T  7784 gtccttcccttttaaaacagaacaaaactgtcgttcagttatcatttttgttgcatttttcgtcctaccccctattttatcctccaaaaacg 7693  T

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Target: scaffold1339 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1339
Description:

Target: scaffold1339; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 92
Target Start/End: Complemental strand, 62 - 30
Alignment:
Q  60 attataaggcttaattacacttttggtcctcgt 92  Q
    ||||| |||||||||||||||||||||||||||    
T  62 attattaggcttaattacacttttggtcctcgt 30  T

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Target: scaffold0830 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0830
Description:

Target: scaffold0830; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 92
Target Start/End: Complemental strand, 5384 - 5352
Alignment:
Q  60 attataaggcttaattacacttttggtcctcgt 92  Q
    ||||| |||||||||||||||||||||||||||    
T  5384 attattaggcttaattacacttttggtcctcgt 5352  T

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