View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5171-Insertion-7 (Length: 308)

Name: NF5171-Insertion-7
Description: NF5171
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5171-Insertion-7
NF5171-Insertion-7
[»] chr6 (1 HSPs)
chr6 (8-308)||(22715407-22715707)


Alignment Details
Target: chr6 (Bit Score: 285; Significance: 1e-160; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 285; E-Value: 1e-160
Query Start/End: Original strand, 8 - 308
Target Start/End: Original strand, 22715407 - 22715707
Alignment:
Q  8 cgattgtctagcaatccttacaataaccaattaattcatttacgattttaaatttgagacatgaattttgaattctataaatttgaaaactaaattgtac 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  22715407 cgattgtctagcaatccttacaataaccaattaattcatttacgattttaaatttgagacatgaattttgatttctataaatttgaaaactaaattgtac 22715506  T
Q  108 ccataatttgaaatatcaaaatagtttcatgcaccaatgtgtctaatatgttcccttgaatctccatcaccaatccttctctttcttcttcatcttcaac 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22715507 ccataatttgaaatatcaaaatagtttcatgcaccaatgtgtctaatatgttcccttgaatctccatcaccaatccttctctttcttcttcatcttcaac 22715606  T
Q  208 tttgatcaatttctccatgtcttctccttcaatcaaattatcgatatcatccaaaacttcacacttcgcacacggaaactctacaactcttttcaacact 307  Q
     ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22715607 cttgatcaatttctccatgtcttctccttcaatcaaattatcaatgtcatccaaaacttcacacttcgcacacggaaactctacaactcttttcaacact 22715706  T
Q  308 c 308  Q
    |    
T  22715707 c 22715707  T

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