View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5172-Insertion-5 (Length: 246)
Name: NF5172-Insertion-5
Description: NF5172
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5172-Insertion-5 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 8 - 246
Target Start/End: Complemental strand, 32489947 - 32489709
Alignment:
| Q |
8 |
taagtaagctcgtggagtctatgtactctcgactcataatctcgtgagagtttacttaatattaggtaacttagttatagtttattacaaagcannnnnn |
107 |
Q |
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| T |
32489947 |
taagtaagctcgtggagtctatgtacactcgactcataatctcgtgagagtttacttaatattaggtaacttagttatagtttattacaaagcatttttt |
32489848 |
T |
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| Q |
108 |
naaggatcacaaagctagtgagttaacctagtattagactatcgtcatttttgctatactcaattttatcattctgttattctgttttggttagttaagc |
207 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32489847 |
taaggatcacaaagctagtgagttaacctagtattagactatcgtcatttttgctatactcaattttatcattctgttattctgttttggttagttaagc |
32489748 |
T |
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| Q |
208 |
ttttgtcaaatttgttaatcagttagttagaactacacc |
246 |
Q |
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| T |
32489747 |
ttttgtcaaatttgttaatcagttagttagaactacacc |
32489709 |
T |
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