View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5173-Insertion-11 (Length: 330)
Name: NF5173-Insertion-11
Description: NF5173
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5173-Insertion-11 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 307; Significance: 1e-173; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 307; E-Value: 1e-173
Query Start/End: Original strand, 8 - 330
Target Start/End: Original strand, 19468782 - 19469104
Alignment:
| Q |
8 |
atttcaatgtaccccaagcaaaaacttcattctctaaccctaatctccaccatgccaccaaagaaaaaccatcttccttacaaggcactcctctattcac |
107 |
Q |
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| T |
19468782 |
atttcaatgtaccccaagcaaaaacttcattctctaaccctaatctccaccatgccaccaaagaaaaaccatcttccttacaaggcactcctctattcac |
19468881 |
T |
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| Q |
108 |
ttctaaccaatctatacctgatttaatatactcatcattcaatctttcaatcccttcttgcactttccttataagaaaatcatcttctagttcaatcaac |
207 |
Q |
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| T |
19468882 |
ttctaaccaatctatacctgatttaatatactcatcattcaatctttcaatcccttcttgcactttccttataagaaaatcatcttctagttcaatcaac |
19468981 |
T |
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| Q |
208 |
tcctccacagtcgctcttgcgaagcctggaaccaatgcattacccgcaaacccattttgaagttcaggaacaaccatttttctaacatcaactggaaaca |
307 |
Q |
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|||| |||||||||||||||||| || ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
19468982 |
tccttcacagtcgctcttgcgaaacccggaaccaatgcattacctgcaaacccattttgaagttcaggaacaaccatttttctaacatcaactggaaaca |
19469081 |
T |
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| Q |
308 |
acattgttgatactttatcatcg |
330 |
Q |
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| T |
19469082 |
acattgttgatactttatcatcg |
19469104 |
T |
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