View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5173-Insertion-5 (Length: 725)
Name: NF5173-Insertion-5
Description: NF5173
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5173-Insertion-5 |
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Alignment Details
Target: chr2 (Bit Score: 456; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 456; E-Value: 0
Query Start/End: Original strand, 8 - 506
Target Start/End: Complemental strand, 21773012 - 21772514
Alignment:
| Q |
8 |
taaagaccatgcacttagaaaaggtttggttgagtcttgtgtgccatcggattttgcaccaaagctagccacattgatagaggcagcatttgaagtttca |
107 |
Q |
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| T |
21773012 |
taaagaccatgcacttagaaaaggttttgttgagtcttgtgtgccatcagattttgcaccaaagctagccacattgatagaggcagcatttgaagtttca |
21772913 |
T |
|
| Q |
108 |
aacaagatgcttaatgtggctaaaaatagaaagatgatgtgaatttttagatgaaccatggcaatgatgaaaatatgataggattgctagagttaagaat |
207 |
Q |
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| T |
21772912 |
aacaagatgctgaatgtggctaaaaatagaaagatgatgtgaatttttagatgaaccatggcaatgatgaaaatatgataggattgctagagttaagaat |
21772813 |
T |
|
| Q |
208 |
tattcatttatatttatacacttaactgtaagagatgaatatgggggacaaggtgtaagaagatatttattatcacatggtttgaagtacaaatcaagct |
307 |
Q |
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||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21772812 |
tattcatttatatttatacacttaattgtaagaggtgaatatgggggacaaggtgtaagaagatatttattatcacatggtttgaagtacaaatcaagct |
21772713 |
T |
|
| Q |
308 |
tattatgtgttaagttgcttaataatctcatattttcaagccttaattcgttgtaagcatatgtgctcaaggctttcgtatttggcttatagattatgag |
407 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21772712 |
tattatgtgttaagttgcttaataatctcatattttcaagccttaattcgttgtaagcatatgtgctcaaggctttcgtatttggcttatagattatgag |
21772613 |
T |
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| Q |
408 |
gtatgaggtttccttccccgtatatgggtgtaggaaccaaatc-aaatatcatgaacccaaaaattcaattcaaaccaattaaattggttcaatttttcc |
506 |
Q |
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|||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
21772612 |
gtatgaggtttcctgccccgtatatgggtgtaggaaccaaatcaaaatatcatgaacccaaaaattcaattcaaacc-cttaaattggttcaatttttcc |
21772514 |
T |
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