View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5174-Insertion-1 (Length: 764)

Name: NF5174-Insertion-1
Description: NF5174
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5174-Insertion-1
NF5174-Insertion-1
[»] chr2 (48 HSPs)
chr2 (7-417)||(44566201-44566611)
chr2 (75-306)||(36032639-36032874)
chr2 (504-644)||(44587638-44587778)
chr2 (500-631)||(41824269-41824399)
chr2 (569-631)||(45472418-45472480)
chr2 (567-628)||(10996257-10996318)
chr2 (501-638)||(42530494-42530631)
chr2 (500-644)||(20218547-20218691)
chr2 (500-639)||(11726496-11726634)
chr2 (552-631)||(40363227-40363306)
chr2 (564-630)||(8778645-8778711)
chr2 (551-639)||(38181812-38181900)
chr2 (570-630)||(38871453-38871513)
chr2 (567-639)||(41805274-41805346)
chr2 (585-643)||(2144054-2144113)
chr2 (551-629)||(14952775-14952853)
chr2 (570-640)||(33775487-33775557)
chr2 (570-644)||(37109032-37109106)
chr2 (569-631)||(44094870-44094932)
chr2 (570-631)||(44089434-44089495)
chr2 (567-619)||(14796898-14796950)
chr2 (503-639)||(15119781-15119917)
chr2 (595-639)||(15446779-15446823)
chr2 (571-631)||(15446850-15446910)
chr2 (570-618)||(15969467-15969515)
chr2 (526-558)||(31952844-31952876)
chr2 (570-630)||(36104362-36104422)
chr2 (573-645)||(44274615-44274687)
chr2 (577-640)||(22373609-22373672)
chr2 (581-631)||(27328255-27328306)
chr2 (580-646)||(27964364-27964428)
chr2 (580-639)||(32143406-32143465)
chr2 (580-631)||(44587724-44587775)
chr2 (528-610)||(921845-921927)
chr2 (573-631)||(7079444-7079502)
chr2 (589-631)||(34359581-34359623)
chr2 (526-608)||(42579050-42579132)
chr2 (572-625)||(10222045-10222098)
chr2 (578-631)||(11342049-11342102)
chr2 (580-637)||(13333528-13333585)
chr2 (580-625)||(14308727-14308772)
chr2 (506-639)||(23377949-23378082)
chr2 (567-640)||(27331827-27331900)
chr2 (568-637)||(34359627-34359696)
chr2 (583-644)||(36129237-36129298)
chr2 (570-631)||(37182887-37182948)
chr2 (503-608)||(40255508-40255612)
chr2 (531-628)||(42818851-42818948)
[»] chr1 (55 HSPs)
chr1 (425-727)||(18569613-18569918)
chr1 (526-644)||(38834606-38834724)
chr1 (500-644)||(15057658-15057802)
chr1 (526-628)||(5246169-5246270)
chr1 (501-618)||(748670-748787)
chr1 (500-644)||(34768274-34768417)
chr1 (506-576)||(39617315-39617385)
chr1 (501-630)||(42761455-42761584)
chr1 (500-644)||(5431336-5431479)
chr1 (531-639)||(15351715-15351823)
chr1 (569-637)||(47446701-47446769)
chr1 (500-631)||(34953904-34954035)
chr1 (505-631)||(20423148-20423274)
chr1 (580-629)||(25554553-25554602)
chr1 (530-631)||(42660388-42660487)
chr1 (569-645)||(19580263-19580339)
chr1 (567-631)||(34953964-34954028)
chr1 (580-639)||(14214610-14214669)
chr1 (580-647)||(15057649-15057716)
chr1 (500-638)||(19175589-19175727)
chr1 (572-634)||(26158713-26158775)
chr1 (572-634)||(26172011-26172073)
chr1 (568-618)||(29064174-29064224)
chr1 (569-631)||(39940556-39940618)
chr1 (570-631)||(3906832-3906893)
chr1 (567-640)||(6758545-6758618)
chr1 (570-631)||(20273191-20273252)
chr1 (572-625)||(26937875-26937928)
chr1 (528-609)||(50155332-50155413)
chr1 (580-644)||(748730-748794)
chr1 (580-639)||(1409130-1409189)
chr1 (498-638)||(5431340-5431479)
chr1 (530-630)||(9002738-9002838)
chr1 (500-564)||(14214604-14214668)
chr1 (500-631)||(19175589-19175720)
chr1 (575-639)||(23398419-23398483)
chr1 (567-639)||(27206759-27206831)
chr1 (569-641)||(42915716-42915788)
chr1 (580-628)||(48781349-48781397)
chr1 (504-639)||(3013615-3013750)
chr1 (567-638)||(14891806-14891877)
chr1 (500-543)||(39940582-39940625)
chr1 (579-630)||(42660366-42660417)
chr1 (505-631)||(8243365-8243491)
chr1 (569-631)||(10256789-10256851)
chr1 (567-637)||(33765789-33765859)
chr1 (569-631)||(39393042-39393104)
chr1 (564-630)||(39619201-39619267)
chr1 (580-638)||(46906862-46906920)
chr1 (501-543)||(47446727-47446769)
chr1 (569-631)||(52112884-52112946)
chr1 (526-612)||(52253565-52253651)
chr1 (567-608)||(19771176-19771217)
chr1 (570-631)||(27936742-27936803)
chr1 (570-639)||(29302136-29302205)
[»] chr3 (41 HSPs)
chr3 (500-644)||(39964290-39964436)
chr3 (500-631)||(39682617-39682748)
chr3 (527-644)||(27161440-27161557)
chr3 (500-631)||(12744902-12745033)
chr3 (503-628)||(24596895-24597020)
chr3 (567-639)||(10872740-10872812)
chr3 (503-639)||(12744901-12745037)
chr3 (506-644)||(4190624-4190761)
chr3 (567-631)||(3648767-3648831)
chr3 (500-639)||(29720077-29720216)
chr3 (578-630)||(54690833-54690885)
chr3 (528-607)||(29290811-29290890)
chr3 (580-631)||(34365123-34365174)
chr3 (569-644)||(36571370-36571445)
chr3 (580-631)||(50603594-50603645)
chr3 (569-631)||(2128431-2128493)
chr3 (570-644)||(8036531-8036605)
chr3 (531-625)||(27707192-27707286)
chr3 (504-630)||(41743599-41743725)
chr3 (500-645)||(331793-331937)
chr3 (503-628)||(334676-334801)
chr3 (501-641)||(105374-105513)
chr3 (567-639)||(331866-331938)
chr3 (575-639)||(7882281-7882345)
chr3 (528-624)||(32711221-32711317)
chr3 (571-639)||(40639781-40639849)
chr3 (500-639)||(8439259-8439398)
chr3 (580-623)||(11041620-11041663)
chr3 (552-631)||(29389335-29389414)
chr3 (580-639)||(54273399-54273458)
chr3 (569-631)||(611590-611652)
chr3 (580-638)||(2313002-2313060)
chr3 (581-639)||(9170112-9170170)
chr3 (581-631)||(45736769-45736819)
chr3 (580-637)||(105374-105431)
chr3 (567-624)||(4980341-4980398)
chr3 (570-631)||(24722695-24722756)
chr3 (580-637)||(36270070-36270127)
chr3 (531-644)||(37897714-37897827)
chr3 (567-628)||(40169068-40169129)
chr3 (579-644)||(50335001-50335065)
[»] chr8 (38 HSPs)
chr8 (501-631)||(12736357-12736488)
chr8 (500-653)||(10934589-10934742)
chr8 (572-631)||(13841856-13841915)
chr8 (500-631)||(24820306-24820436)
chr8 (500-628)||(2627175-2627303)
chr8 (565-637)||(24052894-24052966)
chr8 (580-631)||(1988924-1988975)
chr8 (504-639)||(5888341-5888476)
chr8 (500-631)||(5888344-5888475)
chr8 (566-608)||(9812493-9812535)
chr8 (577-631)||(28480717-28480771)
chr8 (501-558)||(6883627-6883684)
chr8 (528-601)||(10184593-10184666)
chr8 (569-626)||(30114812-30114868)
chr8 (531-608)||(43295920-43295997)
chr8 (501-601)||(10117008-10117108)
chr8 (567-631)||(13964427-13964491)
chr8 (567-631)||(17871831-17871895)
chr8 (580-644)||(44329152-44329216)
chr8 (528-607)||(6189663-6189742)
chr8 (578-637)||(10117049-10117108)
chr8 (569-628)||(20269775-20269834)
chr8 (569-628)||(21056404-21056463)
chr8 (500-639)||(24287785-24287924)
chr8 (580-639)||(24820378-24820437)
chr8 (500-639)||(33070165-33070304)
chr8 (567-610)||(34181571-34181614)
chr8 (531-601)||(8793755-8793825)
chr8 (500-640)||(15037751-15037892)
chr8 (500-625)||(15285654-15285779)
chr8 (500-625)||(15466023-15466148)
chr8 (561-639)||(31271594-31271672)
chr8 (567-637)||(41387830-41387900)
chr8 (570-640)||(42749054-42749124)
chr8 (570-639)||(24053597-24053666)
chr8 (569-626)||(24418950-24419007)
chr8 (500-628)||(37508946-37509074)
chr8 (569-610)||(38779262-38779303)
[»] chr7 (47 HSPs)
chr7 (500-636)||(3967706-3967842)
chr7 (500-644)||(37491268-37491412)
chr7 (528-639)||(43813125-43813236)
chr7 (500-644)||(47534971-47535116)
chr7 (591-644)||(47712474-47712527)
chr7 (500-631)||(23797356-23797487)
chr7 (501-600)||(47708403-47708502)
chr7 (567-637)||(34478303-34478373)
chr7 (519-617)||(47538780-47538877)
chr7 (519-617)||(47545337-47545434)
chr7 (500-644)||(34750323-34750468)
chr7 (500-631)||(1706834-1706965)
chr7 (500-596)||(2456337-2456433)
chr7 (569-645)||(8169166-8169242)
chr7 (503-639)||(8447717-8447853)
chr7 (500-640)||(10422807-10422947)
chr7 (503-631)||(44182530-44182657)
chr7 (503-637)||(2943216-2943350)
chr7 (506-600)||(3105953-3106047)
chr7 (570-628)||(24617808-24617866)
chr7 (505-631)||(27554503-27554629)
chr7 (570-639)||(8595147-8595216)
chr7 (570-639)||(16777892-16777961)
chr7 (570-631)||(31319587-31319648)
chr7 (531-600)||(32549860-32549929)
chr7 (581-645)||(34750410-34750475)
chr7 (569-630)||(38940289-38940350)
chr7 (566-639)||(43103072-43103145)
chr7 (575-639)||(5950270-5950334)
chr7 (567-639)||(8571450-8571522)
chr7 (572-639)||(15051083-15051150)
chr7 (580-631)||(20559606-20559657)
chr7 (505-640)||(21387575-21387710)
chr7 (504-631)||(37491278-37491405)
chr7 (580-631)||(47708409-47708460)
chr7 (504-546)||(2456674-2456716)
chr7 (569-631)||(11602837-11602899)
chr7 (581-639)||(21886467-21886525)
chr7 (571-645)||(28285461-28285535)
chr7 (567-645)||(46648339-46648417)
chr7 (580-638)||(47534971-47535029)
chr7 (570-639)||(2360449-2360518)
chr7 (578-631)||(3105954-3106007)
chr7 (563-608)||(27115299-27115344)
chr7 (580-637)||(36502327-36502384)
chr7 (500-639)||(38238783-38238923)
chr7 (528-601)||(39153329-39153402)
[»] chr5 (40 HSPs)
chr5 (500-636)||(13654510-13654645)
chr5 (506-644)||(1098635-1098772)
chr5 (506-631)||(3100413-3100538)
chr5 (503-636)||(892555-892688)
chr5 (566-618)||(27094313-27094365)
chr5 (568-630)||(238795-238857)
chr5 (570-631)||(14107537-14107598)
chr5 (569-630)||(15311928-15311989)
chr5 (500-637)||(42910714-42910851)
chr5 (504-644)||(13391536-13391676)
chr5 (562-644)||(32911555-32911638)
chr5 (500-631)||(37944603-37944734)
chr5 (569-644)||(40100082-40100157)
chr5 (569-631)||(27895905-27895967)
chr5 (503-629)||(30371337-30371463)
chr5 (578-639)||(71259-71320)
chr5 (570-639)||(5504377-5504446)
chr5 (567-636)||(14772614-14772683)
chr5 (580-625)||(30780151-30780196)
chr5 (500-648)||(1098619-1098766)
chr5 (528-644)||(7613353-7613469)
chr5 (569-625)||(17768077-17768133)
chr5 (531-639)||(25408543-25408651)
chr5 (580-644)||(28499777-28499841)
chr5 (580-639)||(13356218-13356277)
chr5 (580-639)||(25792927-25792986)
chr5 (500-639)||(26300112-26300251)
chr5 (568-630)||(33867933-33867996)
chr5 (567-625)||(5003978-5004036)
chr5 (570-644)||(5240221-5240295)
chr5 (579-625)||(12646584-12646630)
chr5 (583-637)||(25358060-25358114)
chr5 (577-631)||(32398081-32398135)
chr5 (580-630)||(36897751-36897801)
chr5 (575-644)||(40100162-40100232)
chr5 (570-639)||(1996847-1996916)
chr5 (580-625)||(25408624-25408669)
chr5 (570-639)||(27314475-27314544)
chr5 (567-608)||(39785129-39785170)
chr5 (500-637)||(42364221-42364358)
[»] chr4 (63 HSPs)
chr4 (530-631)||(31089917-31090020)
chr4 (501-640)||(29006837-29006976)
chr4 (528-644)||(22235289-22235405)
chr4 (577-631)||(21208652-21208706)
chr4 (504-618)||(49229187-49229301)
chr4 (500-639)||(54164813-54164952)
chr4 (500-639)||(54164814-54164953)
chr4 (572-631)||(3094275-3094334)
chr4 (527-637)||(6462740-6462850)
chr4 (569-644)||(11796654-11796729)
chr4 (500-546)||(56257428-56257474)
chr4 (569-630)||(2254023-2254084)
chr4 (501-630)||(5816548-5816677)
chr4 (580-637)||(29006837-29006894)
chr4 (578-631)||(38539486-38539539)
chr4 (567-628)||(38949750-38949811)
chr4 (500-639)||(19934638-19934777)
chr4 (500-631)||(19934639-19934770)
chr4 (580-640)||(38381975-38382035)
chr4 (580-640)||(48402492-48402552)
chr4 (502-638)||(54106476-54106612)
chr4 (500-631)||(5535722-5535852)
chr4 (235-294)||(20122158-20122217)
chr4 (580-631)||(26636521-26636572)
chr4 (580-631)||(26863106-26863157)
chr4 (500-631)||(38381977-38382108)
chr4 (505-631)||(24798133-24798259)
chr4 (569-631)||(43616215-43616277)
chr4 (567-645)||(44626156-44626234)
chr4 (580-625)||(12596690-12596735)
chr4 (528-612)||(3345348-3345432)
chr4 (580-628)||(7740571-7740619)
chr4 (562-618)||(19936556-19936612)
chr4 (575-639)||(23568456-23568520)
chr4 (580-628)||(32645575-32645623)
chr4 (580-640)||(47181558-47181618)
chr4 (580-624)||(47234362-47234406)
chr4 (501-628)||(4406243-4406370)
chr4 (567-626)||(17657975-17658034)
chr4 (541-644)||(21790148-21790250)
chr4 (526-609)||(25700484-25700567)
chr4 (590-645)||(27990267-27990322)
chr4 (500-607)||(36072571-36072678)
chr4 (569-628)||(44171445-44171504)
chr4 (590-628)||(48002612-48002651)
chr4 (567-646)||(55935981-55936059)
chr4 (569-627)||(6087503-6087561)
chr4 (569-631)||(37255690-37255752)
chr4 (569-631)||(37255751-37255813)
chr4 (580-638)||(56257416-56257474)
chr4 (569-642)||(3740378-3740451)
chr4 (551-640)||(6974985-6975074)
chr4 (580-625)||(16040042-16040086)
chr4 (569-646)||(16912432-16912509)
chr4 (567-628)||(21142158-21142219)
chr4 (571-628)||(31280405-31280462)
chr4 (531-600)||(32645533-32645602)
chr4 (580-637)||(35009100-35009157)
chr4 (567-628)||(36491037-36491097)
chr4 (500-637)||(52281120-52281257)
chr4 (570-631)||(52914069-52914130)
chr4 (580-625)||(54106556-54106601)
chr4 (580-625)||(54508183-54508228)
[»] scaffold0531 (1 HSPs)
scaffold0531 (569-642)||(6924-6997)
[»] chr6 (25 HSPs)
chr6 (527-631)||(14173398-14173502)
chr6 (527-631)||(14177934-14178038)
chr6 (503-639)||(11073465-11073604)
chr6 (507-597)||(33472694-33472784)
chr6 (500-644)||(3203666-3203810)
chr6 (578-626)||(3846444-3846492)
chr6 (569-641)||(8029507-8029579)
chr6 (578-638)||(11637171-11637231)
chr6 (500-608)||(16120996-16121104)
chr6 (500-607)||(10258336-10258443)
chr6 (501-631)||(12383597-12383727)
chr6 (580-646)||(33472679-33472745)
chr6 (569-630)||(18491670-18491731)
chr6 (580-612)||(12154066-12154098)
chr6 (503-639)||(34379736-34379871)
chr6 (506-593)||(6032973-6033060)
chr6 (500-639)||(6560658-6560797)
chr6 (580-631)||(15718474-15718525)
chr6 (506-639)||(28991454-28991589)
chr6 (571-630)||(30013830-30013889)
chr6 (578-640)||(8449655-8449717)
chr6 (578-640)||(8458459-8458521)
chr6 (580-625)||(8030396-8030441)
chr6 (500-645)||(17773495-17773640)
chr6 (574-631)||(29418942-29418999)
[»] scaffold0149 (1 HSPs)
scaffold0149 (570-639)||(24677-24746)


Alignment Details
Target: chr2 (Bit Score: 403; Significance: 0; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 403; E-Value: 0
Query Start/End: Original strand, 7 - 417
Target Start/End: Complemental strand, 44566611 - 44566201
Alignment:
Q  7 aatctaaaccatgggggtgatgtcattgtatcagaagtattaacttgacaatgtttcatccggccgttttcagtcagcaaaaaagcaaatgtccatgtga 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44566611 aatctaaaccatgggggtgatgtcattgtatcagaagtattaacttgacaatgtttcatccggccgttttcagtcagcaaaaaagcaaatgtccatgtga 44566512  T
Q  107 ctgccaaacccaaaggcacctgtaaattaggtaaagaaaataatatcacttaacaaaaatcattttttacaccacagaaatttattttctcttctgaaga 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44566511 ctgccaaacccaaaggcacctgtaaattaggtaaagaaaataatatcacttaacaaaaatcattttttacaccacagaaatttattttctcttctgaaga 44566412  T
Q  207 gcaactcagaagaataatgtggcattagacttactgcatatatctgaaatatgtgatgtccaaaaacagatatcttacgaagatactgccaaaagcaata 306  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  44566411 gcaactcagaagaataatgtggcattagacttactgcatatatctgaaatatgtgatgtccaaaaacagatatcttacgaagatactgcaaaaagcaata 44566312  T
Q  307 tataataaaatatatcagcacactgcaacgattaataccatagacaaagtaggaatctgaattcaacaaacttacaagacaaaaaacaataaacactaat 406  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44566311 tataataaaatatatcagcacactgcaacgattaataccatagacaaagtaggaatctgaattcaacaaacttacaagacaaaaaacaataaacactaat 44566212  T
Q  407 atctgtgctgc 417  Q
    |||||| ||||    
T  44566211 atctgtactgc 44566201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 75 - 306
Target Start/End: Original strand, 36032639 - 36032874
Alignment:
Q  75 ttcagtcagcaaaaaagcaaatgtccatgtgactgccaaacccaaaggcacctgtaaattaggtaaagaaaata----atatcacttaacaaaaatcatt 170  Q
    |||||||||||| ||||||| || |||||| | ||||||||||||||| ||||| |||||||||||| ||||||    | ||||||||||| ||||||||    
T  36032639 ttcagtcagcaagaaagcaactgcccatgtaattgccaaacccaaaggaacctgcaaattaggtaaaaaaaatatataacatcacttaacagaaatcatt 36032738  T
Q  171 ttttacaccacagaaatttattttctcttctgaagagcaactcagaagaataatgtggcattagacttactgcatatatctgaaatatgtgatgtccaaa 270  Q
    | ||||||  ||||||||||||||| || ||  |||| ||||| |||| ||| | |||||||  |||||||||||||||  |||||||| | |||||||     
T  36032739 tgttacacagcagaaatttattttcactgctatagagtaactcggaaggatattatggcattgcacttactgcatatattagaaatatgcggtgtccaag 36032838  T
Q  271 aacagatatcttacgaagatactgccaaaagcaata 306  Q
    |||||||||||||||||||||||||  |||||||||    
T  36032839 aacagatatcttacgaagatactgcagaaagcaata 36032874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 504 - 644
Target Start/End: Complemental strand, 44587778 - 44587638
Alignment:
Q  504 ggtcactattataattaaaaacttactttttagattcattgaacgattgatgtatgagatcattaatatagactatatacatcatttattcaatgaattt 603  Q
    ||||||||||||||  |||||  |||||||||||||||||||| || ||||||||| | |||| ||||||||| | |||||||||||||||||||||  |    
T  44587778 ggtcactattataagcaaaaaactactttttagattcattgaatgagtgatgtatgtggtcatcaatatagaccacatacatcatttattcaatgaacct 44587679  T
Q  604 aaaaaataattttttgcttataatagtggccggaggaagta 644  Q
    |||||||| | |||||||||||||| || ||||||| ||||    
T  44587678 aaaaaatagtattttgcttataataatgaccggagggagta 44587638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 500 - 631
Target Start/End: Complemental strand, 41824399 - 41824269
Alignment:
Q  500 ctccggtcactattataattaaaaacttactttttagattcattgaacgattgatgtatgagatcattaatatagactatatacatcatttattcaatga 599  Q
    |||||||||||| ||||| |||||| | ||||||||| |||||| ||  | ||||||||| | ||  || |||| |||| |||||| ||||||| |||||    
T  41824399 ctccggtcactactataagtaaaaattgactttttaggttcattcaataaatgatgtatgtggtctata-tataaactacatacataatttattgaatga 41824301  T
Q  600 atttaaaaaataattttttgcttataatagtg 631  Q
    || |||||||| | ||||||||||||||||||    
T  41824300 atctaaaaaatgaatttttgcttataatagtg 41824269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 569 - 631
Target Start/End: Complemental strand, 45472480 - 45472418
Alignment:
Q  569 atatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtg 631  Q
    |||||||||| |||||||||||||| |||||||||||||| ||| ||||| ||||||||||||    
T  45472480 atatagactacatacatcatttattgaatgaatttaaaaagtaaatttttacttataatagtg 45472418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 567 - 628
Target Start/End: Complemental strand, 10996318 - 10996257
Alignment:
Q  567 taatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataata 628  Q
    ||||| |||| |||||||||||| ||||||||||||||||| |||| |||||||||||||||    
T  10996318 taataaagaccatatacatcattaattcaatgaatttaaaatataaatttttgcttataata 10996257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 501 - 638
Target Start/End: Original strand, 42530494 - 42530631
Alignment:
Q  501 tccggtcactattataattaaaaacttactttttagattcattgaacgattgatgtatgagatcattaatatagactatatacatcatttattcaatgaa 600  Q
    ||||||||||||||||| |||||| |||| ||||||||||||| ||  | |  |||||  | || ||| ||||||| ||||||||| |||| | ||||||    
T  42530494 tccggtcactattataagtaaaaatttacattttagattcatttaattaatattgtatacggtctttattatagacaatatacatcgtttaatgaatgaa 42530593  T
Q  601 tttaaaaaataattttttgcttataatagtggccggag 638  Q
    | |||||  | | |||||||||||||||||| ||||||    
T  42530594 tgtaaaatgttaatttttgcttataatagtgaccggag 42530631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 500 - 644
Target Start/End: Original strand, 20218547 - 20218691
Alignment:
Q  500 ctccggtcactattataattaaaaacttactttttagattcattgaacgattgatgtatgagatcattaatatagactatatacatcatttattcaatga 599  Q
    |||| |||||||||||||  |||||   ||||||||| |||||||||  |  ||||||||   ||| || ||||||||  |||||||| |||||||||||    
T  20218547 ctccagtcactattataagcaaaaaaacactttttagtttcattgaataaccgatgtatgcagtcagtattatagactggatacatcaattattcaatga 20218646  T
Q  600 atttaaaaaataattttttgcttataatagtggccggaggaagta 644  Q
    || |||||| | |||| ||||||||||||||| | ||||| ||||    
T  20218647 atctaaaaagtgatttcttgcttataatagtgacaggagggagta 20218691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 500 - 639
Target Start/End: Complemental strand, 11726634 - 11726496
Alignment:
Q  500 ctccggtcactattataattaaaaacttactttttagattcattgaacgattgatgtatgagatcattaatatagactatatacatcatttattcaatga 599  Q
    |||| |||||||||||||  ||||| | || ||||||||||||| |   | ||||||||| ||||  ||||| ||| ||||||||||||| ||| |||||    
T  11726634 ctccagtcactattataagcaaaaattaacattttagattcattcattaaatgatgtatgtgatccataataaagattatatacatcattgattgaatga 11726535  T
Q  600 atttaaaaaataattttttgcttataatagtggccggagg 639  Q
    || |||||  | | |||||||||||||||||| |||||||    
T  11726534 atctaaaatgtta-tttttgcttataatagtgaccggagg 11726496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 552 - 631
Target Start/End: Complemental strand, 40363306 - 40363227
Alignment:
Q  552 gatgtatgagatcattaatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtg 631  Q
    |||||||| | |||||||||||||  |  ||||||||||||||||||||  |||||| || |||||||||||||||||||    
T  40363306 gatgtatgtggtcattaatatagatcacgtacatcatttattcaatgaacctaaaaagtagttttttgcttataatagtg 40363227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 564 - 630
Target Start/End: Original strand, 8778645 - 8778711
Alignment:
Q  564 cattaatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagt 630  Q
    ||||| ||||||| ||||| ||||||| || ||||||| |||||| |||||||||||||||||||||    
T  8778645 cattagtatagaccatatatatcatttttttaatgaatctaaaaagtaattttttgcttataatagt 8778711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 551 - 639
Target Start/End: Original strand, 38181812 - 38181900
Alignment:
Q  551 tgatgtatgagatcattaatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggagg 639  Q
    ||||||||| ||||   |||| ||||||||||||||||| ||| ||||||| |||||  || ||||||||||||||||||  |||||||    
T  38181812 tgatgtatgtgatctacaataaagactatatacatcattaattgaatgaatgtaaaatgtagttttttgcttataatagtaaccggagg 38181900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 570 - 630
Target Start/End: Complemental strand, 38871513 - 38871453
Alignment:
Q  570 tatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagt 630  Q
    ||||||| | |||||||||||||||||| |||||| |||||  ||||||||||||||||||    
T  38871513 tatagaccaaatacatcatttattcaataaatttagaaaattgttttttgcttataatagt 38871453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 567 - 639
Target Start/End: Complemental strand, 41805346 - 41805274
Alignment:
Q  567 taatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggagg 639  Q
    ||||| ||||||||||||||||| ||| |||||||||||||   ||  ||||||||||||||||| |||||||    
T  41805346 taataaagactatatacatcattaattgaatgaatttaaaatgcaaaattttgcttataatagtgaccggagg 41805274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 585 - 643
Target Start/End: Original strand, 2144054 - 2144113
Alignment:
Q  585 tcatttattcaatgaatttaaaaaataatttt-ttgcttataatagtggccggaggaagt 643  Q
    ||||||||||||||||  |||||| ||||||| ||||||||||||||| |||||||||||    
T  2144054 tcatttattcaatgaacataaaaattaatttttttgcttataatagtgaccggaggaagt 2144113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 551 - 629
Target Start/End: Complemental strand, 14952853 - 14952775
Alignment:
Q  551 tgatgtatgagatcattaatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatag 629  Q
    ||||||||| ||||  | |||||||||| || ||||||||||| ||||||||||||||  ||  |||||||||||||||    
T  14952853 tgatgtatgtgatctattatatagactacatgcatcatttattgaatgaatttaaaaagcaaacttttgcttataatag 14952775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 570 - 640
Target Start/End: Complemental strand, 33775557 - 33775487
Alignment:
Q  570 tatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggagga 640  Q
    |||||||||||||||||| |||||||||||| | |||||||  ||||||  |||||||||||  |||||||    
T  33775557 tatagactatatacatcagttattcaatgaactaaaaaaatgttttttttattataatagtgatcggagga 33775487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 570 - 644
Target Start/End: Original strand, 37109032 - 37109106
Alignment:
Q  570 tatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggaggaagta 644  Q
    ||||||||| |||||||| || ||||||||||||||| | | | |||||| ||||||||||| ||||| ||||||    
T  37109032 tatagactaaatacatcagttcttcaatgaatttaaatattgaatttttgtttataatagtgaccggaagaagta 37109106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 569 - 631
Target Start/End: Original strand, 44094870 - 44094932
Alignment:
Q  569 atatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtg 631  Q
    |||||||||| ||||| |||||||| |||||||||||||||  |  |||||||||||||||||    
T  44094870 atatagactacatacaacatttattaaatgaatttaaaaaacgaacttttgcttataatagtg 44094932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 570 - 631
Target Start/End: Complemental strand, 44089495 - 44089434
Alignment:
Q  570 tatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtg 631  Q
    ||||||| || ||||||||||||||||||||| ||||| ||   ||||||||||||||||||    
T  44089495 tatagaccatgtacatcatttattcaatgaatataaaagatgtatttttgcttataatagtg 44089434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 567 - 619
Target Start/End: Complemental strand, 14796950 - 14796898
Alignment:
Q  567 taatatagactatatacatcatttattcaatgaatttaaaaaataattttttg 619  Q
    |||||||||||| |||||||||||||| ||| ||||| |||||||| ||||||    
T  14796950 taatatagactagatacatcatttattaaataaatttgaaaaataaatttttg 14796898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 503 - 639
Target Start/End: Original strand, 15119781 - 15119917
Alignment:
Q  503 cggtcactattataattaaaaacttactttttagattcattgaacgattgatgtatgagatcattaatatagactatatacatcatttattcaatgaatt 602  Q
    |||||||||||||||  ||||| | || ||||||||||||| |   | ||||||||| | ||  ||||| |||| |||||||||||| | | ||| |||     
T  15119781 cggtcactattataagcaaaaattaacattttagattcattcattaaatgatgtatgtggtctataataaagacaatatacatcattaaatgaataaatc 15119880  T
Q  603 taaaaaataattttttgcttataatagtggccggagg 639  Q
    |||||  ||  |||||||||||||||||| |||||||    
T  15119881 taaaatgtagatttttgcttataatagtgaccggagg 15119917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 595 - 639
Target Start/End: Complemental strand, 15446823 - 15446779
Alignment:
Q  595 aatgaatttaaaaaataattttttgcttataatagtggccggagg 639  Q
    |||||||||||||||| | |||||||||||||||||| |||||||    
T  15446823 aatgaatttaaaaaatgaatttttgcttataatagtgaccggagg 15446779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 571 - 631
Target Start/End: Original strand, 15446850 - 15446910
Alignment:
Q  571 atagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtg 631  Q
    ||||||||||||||||||||| | ||||||  |||||||| | ||||| ||||||||||||    
T  15446850 atagactatatacatcatttaataaatgaacctaaaaaatgaatttttacttataatagtg 15446910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 570 - 618
Target Start/End: Complemental strand, 15969515 - 15969467
Alignment:
Q  570 tatagactatatacatcatttattcaatgaatttaaaaaataatttttt 618  Q
    |||| ||||||||||||| ||||||||| || |||||||||||||||||    
T  15969515 tataaactatatacatcagttattcaataaacttaaaaaataatttttt 15969467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 526 - 558
Target Start/End: Complemental strand, 31952876 - 31952844
Alignment:
Q  526 ttactttttagattcattgaacgattgatgtat 558  Q
    |||||||||||||||||||||||||||||||||    
T  31952876 ttactttttagattcattgaacgattgatgtat 31952844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 570 - 630
Target Start/End: Original strand, 36104362 - 36104422
Alignment:
Q  570 tatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagt 630  Q
    |||| ||||||||||| ||||||| ||| |||||||| ||||| |||||| ||||||||||    
T  36104362 tataaactatatacataatttatttaataaatttaaacaataaatttttgtttataatagt 36104422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 573 - 645
Target Start/End: Original strand, 44274615 - 44274687
Alignment:
Q  573 agactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggaggaagtac 645  Q
    |||||| |||||||||||||| ||||||| |||||| | | ||||||||||||  |||| ||||||| |||||    
T  44274615 agactacatacatcatttattgaatgaatctaaaaagtgaatttttgcttatatcagtgaccggagggagtac 44274687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 577 - 640
Target Start/End: Complemental strand, 22373672 - 22373609
Alignment:
Q  577 tatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggagga 640  Q
    ||||||||||||| ||| |||  ||||||||||||  |||||||||||| ||||| ||||||||    
T  22373672 tatatacatcattaattgaatatatttaaaaaatatatttttgcttatattagtgaccggagga 22373609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 581 - 631
Target Start/End: Complemental strand, 27328306 - 27328255
Alignment:
Q  581 tacatcatttattcaatgaatttaaaaaat-aattttttgcttataatagtg 631  Q
    ||||||||||||||||||||| ||||||||  ||||||||||||||| ||||    
T  27328306 tacatcatttattcaatgaatataaaaaatgtattttttgcttataacagtg 27328255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 580 - 646
Target Start/End: Original strand, 27964364 - 27964428
Alignment:
Q  580 atacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggaggaagtact 646  Q
    |||||||||||||| ||||||| |||||  | |||||||| ||||||||||| ||||||| ||||||    
T  27964364 atacatcatttattaaatgaatctaaaa--tgattttttgtttataatagtgaccggagggagtact 27964428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 580 - 639
Target Start/End: Complemental strand, 32143465 - 32143406
Alignment:
Q  580 atacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggagg 639  Q
    |||||||||||| | |||||||||||||  |||  ||||||||||||||||| |||||||    
T  32143465 atacatcatttaataaatgaatttaaaatgtaaagttttgcttataatagtgaccggagg 32143406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 580 - 631
Target Start/End: Original strand, 44587724 - 44587775
Alignment:
Q  580 atacatcatttattcaatgaatttaaaaaataattttttgcttataatagtg 631  Q
    |||||||| | ||||||||||| |||||| || |||||||||||||||||||    
T  44587724 atacatcactcattcaatgaatctaaaaagtagttttttgcttataatagtg 44587775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 528 - 610
Target Start/End: Original strand, 921845 - 921927
Alignment:
Q  528 actttttagattcattgaacgattgatgtatgagatcattaatatagactatatacatcatttattcaatgaatttaaaaaat 610  Q
    |||||||||||||||| ||  | ||||||||| ||||  || ||| ||||| |||||||||| ||| |||||| |||||||||    
T  921845 actttttagattcattcaattaatgatgtatgtgatctatattatggactagatacatcattaattgaatgaacttaaaaaat 921927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 573 - 631
Target Start/End: Original strand, 7079444 - 7079502
Alignment:
Q  573 agactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtg 631  Q
    |||| |||||||||||| ||| ||||||| ||||| |||  ||||||||||||||||||    
T  7079444 agaccatatacatcattaattaaatgaatctaaaatatatgtttttgcttataatagtg 7079502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 589 - 631
Target Start/End: Complemental strand, 34359623 - 34359581
Alignment:
Q  589 ttattcaatgaatttaaaaaataattttttgcttataatagtg 631  Q
    ||||| ||||||| ||||||||||||||||| |||||||||||    
T  34359623 ttatttaatgaatctaaaaaataattttttgtttataatagtg 34359581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 526 - 608
Target Start/End: Complemental strand, 42579132 - 42579050
Alignment:
Q  526 ttactttttagattcattgaacgattgatgtatgagatcattaatatagactatatacatcatttattcaatgaatttaaaaa 608  Q
    |||||||||||||||||| ||  | ||||||||| | |   |||||| ||||| |||||||||| ||| ||||||||||||||    
T  42579132 ttactttttagattcattcaattaatgatgtatgtggttcataatatggactacatacatcattaattaaatgaatttaaaaa 42579050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 572 - 625
Target Start/End: Original strand, 10222045 - 10222098
Alignment:
Q  572 tagactatatacatcatttattcaatgaatttaaaaaataattttttgcttata 625  Q
    ||||| |||||||||||||||| ||||| ||||||| || | ||||||||||||    
T  10222045 tagacaatatacatcatttattgaatgattttaaaatatgaatttttgcttata 10222098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 578 - 631
Target Start/End: Original strand, 11342049 - 11342102
Alignment:
Q  578 atatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtg 631  Q
    |||||||||||| ||| ||||||| ||||| |||  ||||||||||||||||||    
T  11342049 atatacatcattaattaaatgaatctaaaatatagatttttgcttataatagtg 11342102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 580 - 637
Target Start/End: Original strand, 13333528 - 13333585
Alignment:
Q  580 atacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccgga 637  Q
    |||||||||||| ||||||||| |||||  ||  |||||||||||||||||| |||||    
T  13333528 atacatcatttaatcaatgaatctaaaatgtagatttttgcttataatagtgaccgga 13333585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 580 - 625
Target Start/End: Original strand, 14308727 - 14308772
Alignment:
Q  580 atacatcatttattcaatgaatttaaaaaataattttttgcttata 625  Q
    |||||||||||||| ||||||| ||||| || ||||||||||||||    
T  14308727 atacatcatttattgaatgaatctaaaatatgattttttgcttata 14308772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 506 - 639
Target Start/End: Original strand, 23377949 - 23378082
Alignment:
Q  506 tcactattataattaaaaacttactttttagattcattgaacgattgatgtatgagatcattaatatagactatatacatcatttattcaatgaatttaa 605  Q
    |||||||||| | |||||  || | ||||||||||||| ||  | ||||||||  |||| ||| | ||||  | |||||||||||| | ||||||| |||    
T  23377949 tcactattattagtaaaactttgcattttagattcattcaattaatgatgtatatgatctttattgtagatcacatacatcatttaataaatgaatctaa 23378048  T
Q  606 aaaataattttttgcttataatagtggccggagg 639  Q
    || || | ||||||||||||||| || |||||||    
T  23378049 aatattaatttttgcttataataatgaccggagg 23378082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 567 - 640
Target Start/End: Original strand, 27331827 - 27331900
Alignment:
Q  567 taatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggagga 640  Q
    ||||| |||||| |||||||||| ||| ||||||| |||||  |   |||||||||||||||||| ||||||||    
T  27331827 taataaagactacatacatcattaattgaatgaatctaaaatgttgatttttgcttataatagtgaccggagga 27331900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 568 - 637
Target Start/End: Original strand, 34359627 - 34359696
Alignment:
Q  568 aatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccgga 637  Q
    |||||| |||| |||||| | || |||||||||| | |||||| |||||||||||||| ||||| |||||    
T  34359627 aatatatactagatacattaatttttcaatgaatctgaaaaatgattttttgcttatattagtgaccgga 34359696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 583 - 644
Target Start/End: Original strand, 36129237 - 36129298
Alignment:
Q  583 catcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggaggaagta 644  Q
    ||||| |||||||||||||||||||| |   ||||||||||||||| || ||||| ||||||    
T  36129237 catcaattattcaatgaatttaaaaagtgtatttttgcttataataatgaccggatgaagta 36129298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 570 - 631
Target Start/End: Original strand, 37182887 - 37182948
Alignment:
Q  570 tatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtg 631  Q
    ||||||| | |||||||||||| | |||||||||||||  ||| ||||||| ||||||||||    
T  37182887 tatagaccacatacatcatttaatgaatgaatttaaaatgtaaatttttgcgtataatagtg 37182948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 503 - 608
Target Start/End: Complemental strand, 40255612 - 40255508
Alignment:
Q  503 cggtcactattataattaaaaacttactttttagattcattgaacgattgatgtatgagatcattaatatagactatatacatcatttattcaatgaatt 602  Q
    |||| ||||||||||  ||||| |||||||||||||||||||||  | |||  |||  ||||| ||||||| |||| ||| || | |||||||||||||     
T  40255612 cggttactattataaaaaaaaa-ttactttttagattcattgaataactgaactatttgatcaataatataaactaaatatataaattattcaatgaatc 40255514  T
Q  603 taaaaa 608  Q
    ||||||    
T  40255513 taaaaa 40255508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 531 - 628
Target Start/End: Complemental strand, 42818948 - 42818851
Alignment:
Q  531 ttttagattcattgaacgattgatgtatgagatcattaatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataata 628  Q
    |||||| |||||||||  | ||||||||  ||||| ||||  |||  |||| ||||| |||||||||||| ||||||| | |||||||| ||||||||    
T  42818948 ttttaggttcattgaataactgatgtatctgatcaataattcagatcatatgcatcaattattcaatgaacttaaaaagtgattttttgtttataata 42818851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 246; Significance: 1e-136; HSPs: 55)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 425 - 727
Target Start/End: Complemental strand, 18569918 - 18569613
Alignment:
Q  425 aacacttcaatttctctgttctatttaggactattaggatgtagtctcatgccctagaagaattgttatgaactact----ccggtcactattataatta 520  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    ||| ||| |||||||||||    
T  18569918 aacacttcaatttctctgttctatttaggaccattaggatgtagtctcatgccctagaagaattgttatgaactacttcctccgatcattattataatta 18569819  T
Q  521 aaaacttactttttagattcattgaacgattgatgtatgagatcattaatatagactatatacatcatttattcaatgaatttaaaaaataattttttgc 620  Q
    |||| |||||||||||||||||||||||| |||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  18569818 aaaaattactttttagattcattgaacgactgatgtatgagaccattaatatagattatatacatcatttattcaatgaatttaaaaaataattttttgc 18569719  T
Q  621 ttataatagtggccggaggaagtactatattttaaggtggcattcaggagttcttgactagtagtgttttcaattttaaagtggttttataataatcctt 720  Q
    || ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  18569718 ttgtaataatggccggaggaagtactatattttaaggtggcattcaggagttcttgactagtagtgttttcaatttt-aagtggttttataataatcctt 18569620  T
Q  721 tttaatt 727  Q
    |||||||    
T  18569619 tttaatt 18569613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 526 - 644
Target Start/End: Complemental strand, 38834724 - 38834606
Alignment:
Q  526 ttactttttagattcattgaacgattgatgtatgagatcattaatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttata 625  Q
    |||||||||||||||||| ||  | ||||||||  | ||||| ||||||||||||||||||||||||| ||||||| |||||||||| ||||||||||||    
T  38834724 ttactttttagattcattcaataaatgatgtatatggtcatttatatagactatatacatcatttatttaatgaatctaaaaaataaatttttgcttata 38834625  T
Q  626 atagtggccggaggaagta 644  Q
    |||||| ||||||| ||||    
T  38834624 atagtgaccggagggagta 38834606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 500 - 644
Target Start/End: Original strand, 15057658 - 15057802
Alignment:
Q  500 ctccggtcactattataattaaaaacttactttttagattcattgaacgattgatgtatgagatcattaatatagactatatacatcatttattcaatga 599  Q
    ||||| ||||||||||||  |||||  |||||||||||||||||||| || ||||||||| | |||||||||||||| | |||||| ||||||| |||||    
T  15057658 ctccgatcactattataagcaaaaaactactttttagattcattgaatgagtgatgtatgtggtcattaatatagaccacatacataatttatttaatga 15057757  T
Q  600 atttaaaaaataattttttgcttataatagtggccggaggaagta 644  Q
    |  ||| || || || ||||||||||||| || |||||| |||||    
T  15057758 acctaataagtagttgtttgcttataatactgaccggagaaagta 15057802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 526 - 628
Target Start/End: Original strand, 5246169 - 5246270
Alignment:
Q  526 ttactttttagattcattgaacgattgatgtatgagatcattaatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttata 625  Q
    |||||||||| ||| |||||| |  ||||||||| | ||||||| |||||||| |||||||||||||||||||||| ||||||||| ||||||| |||||    
T  5246169 ttactttttaaatttattgaatgggtgatgtatgtggtcattaa-atagactacatacatcatttattcaatgaatctaaaaaatagttttttgtttata 5246267  T
Q  626 ata 628  Q
    |||    
T  5246268 ata 5246270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 501 - 618
Target Start/End: Complemental strand, 748787 - 748670
Alignment:
Q  501 tccggtcactattataattaaaaacttactttttagattcattgaacgattgatgtatgagatcattaatatagactatatacatcatttattcaatgaa 600  Q
    |||| ||||||||||||  |||||   | ||||||||||||||||| || |||||||||  | |||||||||||||  ||||||||||||||||||||||    
T  748787 tccgatcactattataagcaaaaaacaattttttagattcattgaatgagtgatgtatgtaaccattaatatagaccgtatacatcatttattcaatgaa 748688  T
Q  601 tttaaaaaataatttttt 618  Q
      ||||||||| ||||||    
T  748687 cctaaaaaatagtttttt 748670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 500 - 644
Target Start/End: Complemental strand, 34768417 - 34768274
Alignment:
Q  500 ctccggtcactattataattaaaaacttactttttagattcattgaacgattgatgtatgagatcattaatatagactatatacatcatttattcaatga 599  Q
    ||||||||||||||||||  ||||  | ||||||||| |||||| ||| | | ||||||| ||||  || |||||||||||||||||||||||| || ||    
T  34768417 ctccggtcactattataagcaaaagttgactttttaggttcattcaacaaataatgtatgtgatctata-tatagactatatacatcatttattgaaaga 34768319  T
Q  600 atttaaaaaataattttttgcttataatagtggccggaggaagta 644  Q
    ||||||||| | |  ||||||||| ||||||| ||||||| ||||    
T  34768318 atttaaaaagtgaaattttgcttacaatagtgaccggagggagta 34768274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 506 - 576
Target Start/End: Original strand, 39617315 - 39617385
Alignment:
Q  506 tcactattataattaaaaacttactttttagattcattgaacgattgatgtatgagatcattaatatagac 576  Q
    |||||||||||| ||||||  ||||||||||||| |||||| || ||||||||| ||||||||||||||||    
T  39617315 tcactattataagtaaaaaactactttttagatttattgaatgagtgatgtatgtgatcattaatatagac 39617385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 501 - 630
Target Start/End: Original strand, 42761455 - 42761584
Alignment:
Q  501 tccggtcactattataattaaaaacttactttttagattcattgaacgattgatgtatgagatcattaatatagactatatacatcatttattcaatgaa 600  Q
    |||||||| ||||||||  ||||  |||| ||||||||||||| ||  | ||||||||  |||| ||| |||||||||||||||||||||| | ||||||    
T  42761455 tccggtcattattataagcaaaactttacattttagattcattcaattaatgatgtatctgatctttattatagactatatacatcatttaatgaatgaa 42761554  T
Q  601 tttaaaaaataattttttgcttataatagt 630  Q
    |  |||| | ||  ||||||||||||||||    
T  42761555 tcaaaaataaaaagttttgcttataatagt 42761584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 500 - 644
Target Start/End: Complemental strand, 5431479 - 5431336
Alignment:
Q  500 ctccggtcactattataattaaaaacttactttttagattcattgaacgattgatgtatgagatcattaatatagactatatacatcatttattcaatga 599  Q
    |||||||||||| |||||  ||||| | |||||||||||||||| ||  | ||||||||| | || |  | |||||| | |||| ||||||||| |||||    
T  5431479 ctccggtcactaatataagcaaaaattaactttttagattcattcaataaatgatgtatgtggtc-tacacatagacaacatacttcatttattgaatga 5431381  T
Q  600 atttaaaaaataattttttgcttataatagtggccggaggaagta 644  Q
    || |||||| | | |||||||||||||||||| |||||| |||||    
T  5431380 atctaaaaagtgaatttttgcttataatagtgaccggagtaagta 5431336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 531 - 639
Target Start/End: Complemental strand, 15351823 - 15351715
Alignment:
Q  531 ttttagattcattgaacgattgatgtatgagatcattaatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagt 630  Q
    ||||||||||||| ||  | ||||||||| | || ||| | ||||| | |||||||||||||| ||||||||||||| |||| |||||||||||| | ||    
T  15351823 ttttagattcattcaataaatgatgtatgtggtctttattgtagacaacatacatcatttattgaatgaatttaaaatataaatttttgcttatatttgt 15351724  T
Q  631 ggccggagg 639  Q
    | |||||||    
T  15351723 gaccggagg 15351715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 569 - 637
Target Start/End: Original strand, 47446701 - 47446769
Alignment:
Q  569 atatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccgga 637  Q
    |||||||||| |||||||||||||| |||||||||||||| | | ||||| |||||||||||| |||||    
T  47446701 atatagactacatacatcatttattgaatgaatttaaaaagtgagtttttacttataatagtgaccgga 47446769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 500 - 631
Target Start/End: Complemental strand, 34954035 - 34953904
Alignment:
Q  500 ctccggtcactattataattaaaaacttactttttagattcattgaacgattgatgtatgagatcattaatatagactatatacatcatttattcaatga 599  Q
    ||||| ||||||||||||  ||||| |||  ||||||||||||| ||  | ||||||||  | || ||| ||||||| | |||||||||||| | |||||    
T  34954035 ctccgatcactattataagcaaaaatttatattttagattcattcaattaatgatgtatatggtctttattatagaccacatacatcatttaatgaatga 34953936  T
Q  600 atttaaaaaataattttttgcttataatagtg 631  Q
    |||||||| ||   ||||||||||||||||||    
T  34953935 atttaaaatattgatttttgcttataatagtg 34953904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 505 - 631
Target Start/End: Original strand, 20423148 - 20423274
Alignment:
Q  505 gtcactattataattaaaaacttactttttagattcattgaacgattgatgtatgagatcattaatatagactatatacatcatttattcaatgaattta 604  Q
    ||||||||||||| ||| ||||||||||| |  ||  ||||   ||||||||||  ||||  || ||||||||  ||||||||||||||||||||||| |    
T  20423148 gtcactattataagtaataacttacttttcaagtttcttgagtaattgatgtatctgatctatattatagactggatacatcatttattcaatgaattca 20423247  T
Q  605 aaaaataattttttgcttataatagtg 631  Q
    |||||   |||||||||||||| ||||    
T  20423248 aaaaaattttttttgcttataacagtg 20423274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 580 - 629
Target Start/End: Complemental strand, 25554602 - 25554553
Alignment:
Q  580 atacatcatttattcaatgaatttaaaaaataattttttgcttataatag 629  Q
    |||||||||||||||||||||| |||||| | ||||||||||||||||||    
T  25554602 atacatcatttattcaatgaatctaaaaagttattttttgcttataatag 25554553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 530 - 631
Target Start/End: Original strand, 42660388 - 42660487
Alignment:
Q  530 tttttagattcattgaacgattgatgtatgagatcattaatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatag 629  Q
    |||||||||||||| ||  | |||||||| | ||||||| ||||||| | |||||||||||||| ||||| |||||||||| |  |||||||||||||||    
T  42660388 tttttagattcattcaataaatgatgtat-acatcatta-tatagaccacatacatcatttattgaatgattttaaaaaatgaacttttgcttataatag 42660485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 569 - 645
Target Start/End: Original strand, 19580263 - 19580339
Alignment:
Q  569 atatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggaggaagtac 645  Q
    ||||| |||| |||||||||||||| ||||||| |||||||||   ||||| ||||||||||| ||||||| |||||    
T  19580263 atatacactacatacatcatttattgaatgaatctaaaaaatatacttttgtttataatagtgaccggagggagtac 19580339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 567 - 631
Target Start/End: Original strand, 34953964 - 34954028
Alignment:
Q  567 taatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtg 631  Q
    ||||| |||| |||||||||||| ||| ||||||| ||||| |||| ||||||||||||||||||    
T  34953964 taataaagaccatatacatcattaattgaatgaatctaaaatataaatttttgcttataatagtg 34954028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 580 - 639
Target Start/End: Original strand, 14214610 - 14214669
Alignment:
Q  580 atacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggagg 639  Q
    |||||||||||||| ||||||  |||||| ||| |||||||||||||||||| |||||||    
T  14214610 atacatcatttattgaatgaacctaaaaagtaagtttttgcttataatagtgaccggagg 14214669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 580 - 647
Target Start/End: Complemental strand, 15057716 - 15057649
Alignment:
Q  580 atacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggaggaagtacta 647  Q
    |||||||| | ||||||||||| |||||| || |||||||||||||||||||  ||||||||| ||||    
T  15057716 atacatcactcattcaatgaatctaaaaagtagttttttgcttataatagtgatcggaggaagcacta 15057649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 500 - 638
Target Start/End: Complemental strand, 19175727 - 19175589
Alignment:
Q  500 ctccggtcactattataattaaaaacttactttttagattcattgaacgattgatgtatgagat-cattaatatagactatatacatcatttattcaatg 598  Q
    |||| |||||||||||||  |||||  ||||||||||||||||| ||  | ||||||||| | | |||||| |||||| | |||||||||||||| ||||    
T  19175727 ctccagtcactattataagcaaaaatctactttttagattcattcaataaatgatgtatgtggttcattaa-atagaccacatacatcatttattgaatg 19175629  T
Q  599 aatttaaaaaataattttttgcttataatagtggccggag 638  Q
    ||  |||||| | |  |||| |||||||||||| ||||||    
T  19175628 aacctaaaaagtgaaattttacttataatagtgaccggag 19175589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 572 - 634
Target Start/End: Complemental strand, 26158775 - 26158713
Alignment:
Q  572 tagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggcc 634  Q
    ||||||| ||||||||||| || |||||| ||||||| | | |||||||||||||||||||||    
T  26158775 tagactaaatacatcatttgttgaatgaacttaaaaagttaatttttgcttataatagtggcc 26158713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 572 - 634
Target Start/End: Complemental strand, 26172073 - 26172011
Alignment:
Q  572 tagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggcc 634  Q
    ||||||| ||||||||||| || |||||| ||||||| | | |||||||||||||||||||||    
T  26172073 tagactaaatacatcatttgttgaatgaacttaaaaagttaatttttgcttataatagtggcc 26172011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 568 - 618
Target Start/End: Complemental strand, 29064224 - 29064174
Alignment:
Q  568 aatatagactatatacatcatttattcaatgaatttaaaaaataatttttt 618  Q
    |||||||| || ||||||||||||| |||||||| ||||||||||||||||    
T  29064224 aatatagattaaatacatcatttatacaatgaatctaaaaaataatttttt 29064174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 569 - 631
Target Start/End: Original strand, 39940556 - 39940618
Alignment:
Q  569 atatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtg 631  Q
    |||||||||| |||||| ||||||| ||||||| |||||| ||| ||||| ||||||||||||    
T  39940556 atatagactacatacattatttattgaatgaatctaaaaagtaaatttttacttataatagtg 39940618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 570 - 631
Target Start/End: Original strand, 3906832 - 3906893
Alignment:
Q  570 tatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtg 631  Q
    |||| |||| ||||| |||||||| ||||||| |||||||||| |||||| |||||||||||    
T  3906832 tatatactacatacaccatttattaaatgaatctaaaaaataaatttttgtttataatagtg 3906893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 567 - 640
Target Start/End: Complemental strand, 6758618 - 6758545
Alignment:
Q  567 taatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggagga 640  Q
    ||||| ||||||||||||||||| ||| ||||||| |||||   ||  ||||||||||||||||| ||||||||    
T  6758618 taataaagactatatacatcattaattgaatgaatgtaaaatgcaaagttttgcttataatagtgaccggagga 6758545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 570 - 631
Target Start/End: Original strand, 20273191 - 20273252
Alignment:
Q  570 tatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtg 631  Q
    ||||||||  ||||||||||||||||||||||| ||||| |  |||||||||||||| ||||    
T  20273191 tatagactggatacatcatttattcaatgaattaaaaaagttgttttttgcttataacagtg 20273252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 572 - 625
Target Start/End: Complemental strand, 26937928 - 26937875
Alignment:
Q  572 tagactatatacatcatttattcaatgaatttaaaaaataattttttgcttata 625  Q
    ||||| |||||||||||||||| ||||||||||||| || | ||||||||||||    
T  26937928 tagacaatatacatcatttattgaatgaatttaaaatatgaatttttgcttata 26937875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 528 - 609
Target Start/End: Complemental strand, 50155413 - 50155332
Alignment:
Q  528 actttttagattcattgaacgattgatgtatgagatcattaatatagactatatacatcatttattcaatgaatttaaaaaa 609  Q
    ||||||||||||||||||   ||||||||||  | ||  |||||||||| | ||||||||||||| ||||||||| ||||||    
T  50155413 actttttagattcattgagtaattgatgtatttggtctataatatagaccaaatacatcatttatgcaatgaattaaaaaaa 50155332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 580 - 644
Target Start/End: Original strand, 748730 - 748794
Alignment:
Q  580 atacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggaggaagta 644  Q
    |||||||| | ||||||||||| ||||||||  |||||||||||||||||||  |||| ||||||    
T  748730 atacatcactcattcaatgaatctaaaaaattgttttttgcttataatagtgatcggatgaagta 748794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 580 - 639
Target Start/End: Original strand, 1409130 - 1409189
Alignment:
Q  580 atacatcatttattcaatgaatttaaaaa-ataattttttgcttataatagtggccggagg 639  Q
    |||||||||||||| ||||||| |||||| |||| |||||||||||||||||| |||||||    
T  1409130 atacatcatttattgaatgaatctaaaaagataa-tttttgcttataatagtgaccggagg 1409189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 498 - 638
Target Start/End: Original strand, 5431340 - 5431479
Alignment:
Q  498 tactccggtcactattataattaaaaacttactttttagattcattgaacgattgatgtatgagatcattaatatagactatatacatcatttattcaat 597  Q
    ||||||||||||||||||||  ||||| | |||||||||||||||| ||  | ||| |||||   ||  |  | ||||| | |||||||||||||| |||    
T  5431340 tactccggtcactattataagcaaaaattcactttttagattcattcaataaatgaagtatgttgtctatg-tgtagaccacatacatcatttattgaat 5431438  T
Q  598 gaatttaaaaaataattttttgcttataatagtggccggag 638  Q
    |||| |||||| | | |||||||||||| ||||| ||||||    
T  5431439 gaatctaaaaagttaatttttgcttatattagtgaccggag 5431479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 530 - 630
Target Start/End: Complemental strand, 9002838 - 9002738
Alignment:
Q  530 tttttagattcattgaacgattgatgtatgagatcattaatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatag 629  Q
    |||||||||||||| ||  | ||||||||| |||| ||| | ||||| | |||||||||||||| |||| || ||||| |||  |||||||||||| |||    
T  9002838 tttttagattcatttaataaatgatgtatgtgatctttattgtagacaacatacatcatttattgaatgcatctaaaatatacatttttgcttatactag 9002739  T
Q  630 t 630  Q
    |    
T  9002738 t 9002738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 500 - 564
Target Start/End: Complemental strand, 14214668 - 14214604
Alignment:
Q  500 ctccggtcactattataattaaaaacttactttttagattcattgaacgattgatgtatgagatc 564  Q
    ||||||||||||||||||  ||||||||||||||||| |||||| ||  | ||||||||| ||||    
T  14214668 ctccggtcactattataagcaaaaacttactttttaggttcattcaataaatgatgtatgtgatc 14214604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 500 - 631
Target Start/End: Original strand, 19175589 - 19175720
Alignment:
Q  500 ctccggtcactattataattaaaaacttactttttagattcattgaacgattgatgtatgagatc-attaatatagactatatacatcatttattcaatg 598  Q
    |||||||||||||||||| |||||  | ||||||||| |||||| ||  | ||||||||| | || ||| | ||  || | |||||||||||||| ||||    
T  19175589 ctccggtcactattataagtaaaatttcactttttaggttcattcaataaatgatgtatgtggtctattta-atgaaccacatacatcatttattgaatg 19175687  T
Q  599 aatttaaaaaataattttttgcttataatagtg 631  Q
    ||| |||||| ||  ||||||||||||||||||    
T  19175688 aatctaaaaagtagatttttgcttataatagtg 19175720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 575 - 639
Target Start/End: Complemental strand, 23398483 - 23398419
Alignment:
Q  575 actatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggagg 639  Q
    ||||||||||||||||| | ||||||| |||||  | | |||||||||||||||||| |||||||    
T  23398483 actatatacatcatttaatgaatgaatctaaaatgttagtttttgcttataatagtgaccggagg 23398419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 567 - 639
Target Start/End: Complemental strand, 27206831 - 27206759
Alignment:
Q  567 taatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggagg 639  Q
    ||||| |||||| |||||||||| ||| |||| || |||||| |  ||||||||||||| |||||||||||||    
T  27206831 taataaagactacatacatcattaattgaatgtatctaaaaagtggttttttgcttatattagtggccggagg 27206759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 569 - 641
Target Start/End: Original strand, 42915716 - 42915788
Alignment:
Q  569 atatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggaggaa 641  Q
    |||||||| | ||| |||||||||| |||||| ||||||| |  ||||||||||||||||||| || ||||||    
T  42915716 atatagaccacatatatcatttatttaatgaacttaaaaagtgtttttttgcttataatagtgaccagaggaa 42915788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 580 - 628
Target Start/End: Complemental strand, 48781397 - 48781349
Alignment:
Q  580 atacatcatttattcaatgaatttaaaaaataattttttgcttataata 628  Q
    |||||||| |||||| |||||| ||||||||||| ||||||||||||||    
T  48781397 atacatcaattattctatgaatctaaaaaataatgttttgcttataata 48781349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 504 - 639
Target Start/End: Original strand, 3013615 - 3013750
Alignment:
Q  504 ggtcactattataattaaaaacttactttttagattcattgaacgattgatgtatgagatcattaatatagactatatacatcatttattcaatgaattt 603  Q
    ||||||||||||||  ||||| |||  ||||||||| ||| ||  | || |||||| | || ||| |||| |  |||||||||||||| | ||||||| |    
T  3013615 ggtcactattataagcaaaaaattatattttagatttattcaattaatgttgtatgtggtctttattataaataatatacatcatttaatgaatgaatgt 3013714  T
Q  604 aaaaaataattttttgcttataatagtggccggagg 639  Q
    ||||  | | |||||||||||||||||| |||||||    
T  3013715 aaaatgttaatttttgcttataatagtgaccggagg 3013750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 567 - 638
Target Start/End: Original strand, 14891806 - 14891877
Alignment:
Q  567 taatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggag 638  Q
    ||||| |||| ||||||||||||||||  || ||| |||||  ||| |||||||||||||||||| ||||||    
T  14891806 taataaagaccatatacatcatttattggataaatctaaaatttaaatttttgcttataatagtgaccggag 14891877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 500 - 543
Target Start/End: Complemental strand, 39940625 - 39940582
Alignment:
Q  500 ctccggtcactattataattaaaaacttactttttagattcatt 543  Q
    ||||| |||||||||||| |||||| ||||||||||||||||||    
T  39940625 ctccgatcactattataagtaaaaatttactttttagattcatt 39940582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 579 - 630
Target Start/End: Complemental strand, 42660417 - 42660366
Alignment:
Q  579 tatacatcatttattcaatgaatttaaaaaataattttttgcttataatagt 630  Q
    ||||||||||||||| ||||||| |||||||| |  ||||||||||||||||    
T  42660417 tatacatcatttattgaatgaatctaaaaaatcaacttttgcttataatagt 42660366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 505 - 631
Target Start/End: Original strand, 8243365 - 8243491
Alignment:
Q  505 gtcactattataattaaaaacttactttttagattcattgaacgattgatgtatgagatcattaatatagactatatacatcatttattcaatgaattta 604  Q
    |||| |||||||| |||||| |||| |||| | |||||| ||  | |||| |||  ||||  ||||| |||| | |||||||||||||||||| || |||    
T  8243365 gtcattattataaataaaaatttacatttttggttcatttaataagtgatatatatgatctataatacagacaacatacatcatttattcaataaactta 8243464  T
Q  605 aaaaataattttttgcttataatagtg 631  Q
    ||||||||  || | ||||||||||||    
T  8243465 aaaaataaaattctacttataatagtg 8243491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 569 - 631
Target Start/End: Complemental strand, 10256851 - 10256789
Alignment:
Q  569 atatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtg 631  Q
    |||||||| | |||||||||||||| ||||||| |||||| | | ||||| ||||||||||||    
T  10256851 atatagaccacatacatcatttattgaatgaatctaaaaagtgaattttttcttataatagtg 10256789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 567 - 637
Target Start/End: Complemental strand, 33765859 - 33765789
Alignment:
Q  567 taatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccgga 637  Q
    ||||| |||| |||||||||||| ||| || |||||||||| |||| ||||| |||||||| ||| |||||    
T  33765859 taataaagaccatatacatcattaattaaacgaatttaaaatataaatttttacttataatcgtgaccgga 33765789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 569 - 631
Target Start/End: Original strand, 39393042 - 39393104
Alignment:
Q  569 atatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtg 631  Q
    |||| ||| ||||| || ||||||| ||||||| ||||||||||||  |||||||||||||||    
T  39393042 atatggaccatatatattatttattgaatgaatctaaaaaataattagttgcttataatagtg 39393104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 564 - 630
Target Start/End: Complemental strand, 39619267 - 39619201
Alignment:
Q  564 cattaatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagt 630  Q
    ||||| ||||||||| | |||||||||||||||| ||| |||||| |  ||||||||||| ||||||    
T  39619267 cattattatagactagacacatcatttattcaataaatctaaaaagtttttttttgcttacaatagt 39619201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 580 - 638
Target Start/End: Complemental strand, 46906920 - 46906862
Alignment:
Q  580 atacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggag 638  Q
    |||||||||||| | ||||||| ||||| |||  |||||||||||||||||| ||||||    
T  46906920 atacatcatttaatgaatgaatctaaaatatagatttttgcttataatagtgaccggag 46906862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 501 - 543
Target Start/End: Complemental strand, 47446769 - 47446727
Alignment:
Q  501 tccggtcactattataattaaaaacttactttttagattcatt 543  Q
    ||||||||||||||||| |||||||| |||||||| |||||||    
T  47446769 tccggtcactattataagtaaaaactcactttttaaattcatt 47446727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 569 - 631
Target Start/End: Complemental strand, 52112946 - 52112884
Alignment:
Q  569 atatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtg 631  Q
    |||||||| | |||||||||||||| ||||||| |||||| | |  |||||||||||||||||    
T  52112946 atatagaccacatacatcatttattgaatgaatataaaaagtgaacttttgcttataatagtg 52112884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 526 - 612
Target Start/End: Original strand, 52253565 - 52253651
Alignment:
Q  526 ttactttttagattcattgaacgattgatgtatgagatcattaatatagactatatacatcatttattcaatgaatttaaaaaataa 612  Q
    |||||||||| ||||||| ||  | ||||||||| |||   |||||| ||||| || ||||||| ||| ||||||||||||||||||    
T  52253565 ttactttttatattcattcaattaatgatgtatgtgatttataatatggactacatgcatcattaattgaatgaatttaaaaaataa 52253651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 567 - 608
Target Start/End: Complemental strand, 19771217 - 19771176
Alignment:
Q  567 taatatagactatatacatcatttattcaatgaatttaaaaa 608  Q
    |||||||||| ||||||| |||||||| ||||||||||||||    
T  19771217 taatatagaccatatacaacatttattgaatgaatttaaaaa 19771176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 570 - 631
Target Start/End: Original strand, 27936742 - 27936803
Alignment:
Q  570 tatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtg 631  Q
    ||||||||| |||| ||||||| | ||||||| ||||||  ||||||||||||||| |||||    
T  27936742 tatagactacatacgtcatttaataaatgaatctaaaaatcaattttttgcttatattagtg 27936803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 570 - 639
Target Start/End: Original strand, 29302136 - 29302205
Alignment:
Q  570 tatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggagg 639  Q
    ||||||||| |||| ||||||| | ||||||| ||||||  || |||||||||||| ||||| |||||||    
T  29302136 tatagactacatacgtcatttaatgaatgaatctaaaaatcaaatttttgcttatattagtgaccggagg 29302205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 76; Significance: 1e-34; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 500 - 644
Target Start/End: Complemental strand, 39964436 - 39964290
Alignment:
Q  500 ctccggtcactattataattaaaaact--tactttttagattcattgaacgattgatgtatgagatcattaatatagactatatacatcatttattcaat 597  Q
    |||||||||||||||||| ||||||||  | |||||||  |||||||||||| ||||||||| || ||||||||||||||| |||||| |||||||||||    
T  39964436 ctccggtcactattataagtaaaaactagtgctttttatgttcattgaacgagtgatgtatgtgaccattaatatagactacatacataatttattcaat 39964337  T
Q  598 gaatttaaaaaataattttttgcttataatagtggccggaggaagta 644  Q
    |||| |||||| || |||||||||||||||| || ||||||| ||||    
T  39964336 gaatctaaaaagtagttttttgcttataataatgaccggagggagta 39964290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 500 - 631
Target Start/End: Complemental strand, 39682748 - 39682617
Alignment:
Q  500 ctccggtcactattataattaaaaacttactttttagattcattgaacgattgatgtatgagatcattaatatagactatatacatcatttattcaatga 599  Q
    ||||||||| |||||||| ||||||  || ||||||| ||||||||| || || |||||| || ||||||||||||| | ||||||||||||||||||||    
T  39682748 ctccggtcattattataaataaaaaactattttttaggttcattgaaagagtgttgtatgtgaccattaatatagaccacatacatcatttattcaatga 39682649  T
Q  600 atttaaaaaataattttttgcttataatagtg 631  Q
    |  |||||||||||||||| ||||||||||||    
T  39682648 acctaaaaaataattttttacttataatagtg 39682617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 527 - 644
Target Start/End: Complemental strand, 27161557 - 27161440
Alignment:
Q  527 tactttttagattcattgaacgattgatgtatgagatcattaatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataa 626  Q
    |||||||||| || |||||| || ||||| ||| | |||||||||| ||  | ||||||||||||||| |||||  ||||||||||||||||| ||||||    
T  27161557 tactttttaggttaattgaatgagtgatgaatgtggtcattaatatggatcacatacatcatttattctatgaacctaaaaaataattttttgtttataa 27161458  T
Q  627 tagtggccggaggaagta 644  Q
    || || ||||||||||||    
T  27161457 taatgaccggaggaagta 27161440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 500 - 631
Target Start/End: Original strand, 12744902 - 12745033
Alignment:
Q  500 ctccggtcactattataattaaaaacttactttttagattcattgaacgattgatgtatgagatcattaatatagactatatacatcatttattcaatga 599  Q
    ||||||||||||||||||  |||||||||| ||||||||||||| ||  | ||||||||  | || ||| ||||||| | |||||||||||| | ||||     
T  12744902 ctccggtcactattataagcaaaaacttacattttagattcattcaattaatgatgtatatggtctttattatagaccacatacatcatttaatgaatgt 12745001  T
Q  600 atttaaaaaataattttttgcttataatagtg 631  Q
    || |||||  | | ||||||||||||||||||    
T  12745002 atctaaaatgttaatttttgcttataatagtg 12745033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 503 - 628
Target Start/End: Original strand, 24596895 - 24597020
Alignment:
Q  503 cggtcactattataattaaaaacttactttttagattcattgaacgattgatgtatgagatcattaatatagactatatacatcatttattcaatgaatt 602  Q
    |||||| |||||||| |||||| |||| ||||||||||||| ||  |  |||||||| |||   |||| |||| ||||||||| |||||||||||||| |    
T  24596895 cggtcattattataagtaaaaatttacattttagattcattcaataaacgatgtatgtgatttataatgtagattatatacattatttattcaatgaact 24596994  T
Q  603 taaaaaataattttttgcttataata 628  Q
    ||||| || | ||||| |||||||||    
T  24596995 taaaatatgaattttttcttataata 24597020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 567 - 639
Target Start/End: Original strand, 10872740 - 10872812
Alignment:
Q  567 taatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggagg 639  Q
    ||||| |||| |||||||||||| ||| ||||||| ||||| |||| |||||||||||||||||| |||||||    
T  10872740 taataaagaccatatacatcattaattgaatgaatctaaaatataaatttttgcttataatagtgaccggagg 10872812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 503 - 639
Target Start/End: Complemental strand, 12745037 - 12744901
Alignment:
Q  503 cggtcactattataattaaaaacttactttttagattcattgaacgattgatgtatgagatcattaatatagactatatacatcatttattcaatgaatt 602  Q
    |||||||||||||||  ||||| | || |||||||| |||| |   | ||||||||| | ||  ||||| |||| |||||||||||| ||| |||||||     
T  12745037 cggtcactattataagcaaaaattaacattttagatacattcattaaatgatgtatgtggtctataataaagaccatatacatcattaattgaatgaatc 12744938  T
Q  603 taaaaaataattttttgcttataatagtggccggagg 639  Q
    |||||  ||| |||||||||||||||||| |||||||    
T  12744937 taaaatgtaagtttttgcttataatagtgaccggagg 12744901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 506 - 644
Target Start/End: Complemental strand, 4190761 - 4190624
Alignment:
Q  506 tcactattataattaaaaacttactttttagattcattgaacgattgatgtatgagatcattaatatagactatatacatcatttattcaatgaatttaa 605  Q
    ||||||||||||  ||||  | ||||||||| |||||| ||  | ||||||||||| ||  || ||||| ||| |||||| ||||||| ||||||  |||    
T  4190761 tcactattataagcaaaagttgactttttaggttcattcaataaatgatgtatgaggtctata-tataggctacatacataatttattgaatgaaactaa 4190663  T
Q  606 aaaataattttttgcttataatagtggccggaggaagta 644  Q
    ||||| | ||||| |||||||||||| ||||||||||||    
T  4190662 aaaatgaattttttcttataatagtgaccggaggaagta 4190624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 567 - 631
Target Start/End: Original strand, 3648767 - 3648831
Alignment:
Q  567 taatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtg 631  Q
    ||||| ||||||||||||||||| ||| ||||||| ||||| ||||  |||||||||||||||||    
T  3648767 taataaagactatatacatcattgattgaatgaatgtaaaatataaagttttgcttataatagtg 3648831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 500 - 639
Target Start/End: Original strand, 29720077 - 29720216
Alignment:
Q  500 ctccggtcactattataattaaaaacttactttttagattcattgaacgattgatgtatgagatcat-taatatagactatatacatcatttattcaatg 598  Q
    |||||||||||| |||||| |||||   ||||||||||| |||| ||  |||||| |||| || ||| ||||| |||| | |||||||||| ||| ||||    
T  29720077 ctccggtcactaatataatcaaaaatccactttttagatgcattcaattattgatatatgtga-catataataaagaccacatacatcattaattaaatg 29720175  T
Q  599 aatttaaaaaataattttttgcttataatagtggccggagg 639  Q
     ||||||||| | | |||||||||||| ||||| |||||||    
T  29720176 tatttaaaaagtgaatttttgcttatattagtgaccggagg 29720216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 578 - 630
Target Start/End: Complemental strand, 54690885 - 54690833
Alignment:
Q  578 atatacatcatttattcaatgaatttaaaaaataattttttgcttataatagt 630  Q
    |||||||||||||| | ||||||| |||||||||||||||| |||||||||||    
T  54690885 atatacatcatttaatgaatgaatctaaaaaataatttttttcttataatagt 54690833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 528 - 607
Target Start/End: Original strand, 29290811 - 29290890
Alignment:
Q  528 actttttagattcattgaacgattgatgtatgagatcattaatatagactatatacatcatttattcaatgaatttaaaa 607  Q
    |||||||||||||||||||| | ||||||||  ||||  || ||||||||| |||||| | |||||||||||||| ||||    
T  29290811 actttttagattcattgaacaactgatgtatctgatctatattatagactaaatacataagttattcaatgaattaaaaa 29290890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 580 - 631
Target Start/End: Original strand, 34365123 - 34365174
Alignment:
Q  580 atacatcatttattcaatgaatttaaaaaataattttttgcttataatagtg 631  Q
    |||||||||||||  ||| ||| |||||||||||||||||||||||||||||    
T  34365123 atacatcatttatcgaattaatctaaaaaataattttttgcttataatagtg 34365174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 569 - 644
Target Start/End: Complemental strand, 36571445 - 36571370
Alignment:
Q  569 atatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggaggaagta 644  Q
    |||||||||| |||||||||||||| ||| ||| ||||||| ||  ||||||||||||||||| ||| | ||||||    
T  36571445 atatagactacatacatcatttattgaataaatctaaaaaagaaacttttgcttataatagtgaccgaatgaagta 36571370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 580 - 631
Target Start/End: Original strand, 50603594 - 50603645
Alignment:
Q  580 atacatcatttattcaatgaatttaaaaaataattttttgcttataatagtg 631  Q
    |||||||||||||| |||||| ||||||||||  ||||||||||||||||||    
T  50603594 atacatcatttattgaatgaacttaaaaaatagatttttgcttataatagtg 50603645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 569 - 631
Target Start/End: Original strand, 2128431 - 2128493
Alignment:
Q  569 atatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtg 631  Q
    |||||||| | |||||||||||||| ||||||| ||||| || | ||||||||||||||||||    
T  2128431 atatagaccacatacatcatttattgaatgaatctaaaacatgaatttttgcttataatagtg 2128493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 570 - 644
Target Start/End: Complemental strand, 8036605 - 8036531
Alignment:
Q  570 tatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggaggaagta 644  Q
    |||| |||| |||||||| ||||||||||||  |||||||||| | |||||||||||||||| ||| ||| ||||    
T  8036605 tataaactaaatacatcagttattcaatgaacctaaaaaataaatatttgcttataatagtgaccgaagggagta 8036531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 531 - 625
Target Start/End: Complemental strand, 27707286 - 27707192
Alignment:
Q  531 ttttagattcattgaacgattgatgtatgagatcattaatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttata 625  Q
    ||||||||||||| ||  | ||||||||| | || ||| | ||||| ||||| |||||||||| ||||||||||||| || | ||||||||||||    
T  27707286 ttttagattcattcaataaatgatgtatgtggtctttattgtagacaatatatatcatttattgaatgaatttaaaatatgaatttttgcttata 27707192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 504 - 630
Target Start/End: Complemental strand, 41743725 - 41743599
Alignment:
Q  504 ggtcactattataattaaaaacttactttttagattcattgaacgattgatgtatgagatcattaatatagactatatacatcatttattcaatgaattt 603  Q
    |||||||||||||| |||||  |||| |||| |||||||| |   | ||||||||  | || ||| ||||||| |||||||||||||| | || |||| |    
T  41743725 ggtcactattataagtaaaagtttacattttggattcattcagttaatgatgtatatggtctttattatagaccatatacatcatttaatgaacgaatct 41743626  T
Q  604 aaaaaataattttttgcttataatagt 630  Q
    |||| || | |||||||||||||||||    
T  41743625 aaaatattaatttttgcttataatagt 41743599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 500 - 645
Target Start/End: Complemental strand, 331937 - 331793
Alignment:
Q  500 ctccggtcactattataattaaaaacttactttttagattcattgaacgattgatgtatgagatcattaatatagactatatacatcatttattcaatga 599  Q
    ||||||||||||||||||  ||||| | || ||||||||||||| |   | ||||||||   ||| ||| ||||||| | |||||||||||| ||||| |    
T  331937 ctccggtcactattataagcaaaaattaacattttagattcattcattaaatgatgtatataatctttattatagaccacatacatcatttaatcaat-a 331839  T
Q  600 atttaaaaaataattttttgcttataatagtggccggaggaagtac 645  Q
    | ||||||  |   |||||||||||||||||| |||||||| ||||    
T  331838 aattaaaatgttgatttttgcttataatagtgaccggaggatgtac 331793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 503 - 628
Target Start/End: Complemental strand, 334801 - 334676
Alignment:
Q  503 cggtcactattataattaaaaacttactttttagattcattgaacgattgatgtatgagatcattaatatagactatatacatcatttattcaatgaatt 602  Q
    |||||||||||||||  ||||  |||| ||| ||||||||||||  | |||||||||   || ||| ||||||| ||||| |||||||||| ||| ||||    
T  334801 cggtcactattataagaaaaattttacctttaagattcattgaattaatgatgtatgtagtctttattatagaccatatatatcatttattgaattaatt 334702  T
Q  603 taaaaaataattttttgcttataata 628  Q
    ||||| ||    ||||||||||||||    
T  334701 taaaatatggggttttgcttataata 334676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 501 - 641
Target Start/End: Original strand, 105374 - 105513
Alignment:
Q  501 tccggtcactattataattaaaaacttactttttagattcattgaacgattgatgtatgagatcattaatatagactatatacatcatttattcaatgaa 600  Q
    ||||||||||||| |||  ||||| | |||||||||||||||||||  | ||||||||| || |  | |||||||| | |||||| || |||| ||||||    
T  105374 tccggtcactattgtaaacaaaaattcactttttagattcattgaataaatgatgtatgtgaaccat-atatagaccacatacataatgtattgaatgaa 105472  T
Q  601 tttaaaaaataattttttgcttataatagtggccggaggaa 641  Q
      |||||| | |  |||||||||||| |||| |||||||||    
T  105473 cctaaaaagtcaacttttgcttataaaagtgaccggaggaa 105513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 567 - 639
Target Start/End: Original strand, 331866 - 331938
Alignment:
Q  567 taatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggagg 639  Q
    ||||| ||| ||||||||||||||| | ||||||| |||||  | | |||||||||||||||||| |||||||    
T  331866 taataaagattatatacatcatttaatgaatgaatctaaaatgttaatttttgcttataatagtgaccggagg 331938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 575 - 639
Target Start/End: Complemental strand, 7882345 - 7882281
Alignment:
Q  575 actatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggagg 639  Q
    ||||||||||||||||| | ||||||| |||||  | | |||||||||||||||||| |||||||    
T  7882345 actatatacatcatttaattaatgaatctaaaatgttaatttttgcttataatagtgaccggagg 7882281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 528 - 624
Target Start/End: Complemental strand, 32711317 - 32711221
Alignment:
Q  528 actttttagattcattgaacgattgatgtatgagatcattaatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttat 624  Q
    |||||||||||||||||||  ||||||||||  | ||  |||||||| | | |||||||| ||||||||||||  |||||| | | |||||||||||    
T  32711317 actttttagattcattgaataattgatgtatctggtctataatataggccaaatacatcaattattcaatgaacctaaaaagtgactttttgcttat 32711221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 571 - 639
Target Start/End: Original strand, 40639781 - 40639849
Alignment:
Q  571 atagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggagg 639  Q
    |||||| | |||||||||||| | |||||||||||||  | | |||||||||||||||||| |||||||    
T  40639781 atagaccacatacatcatttaatgaatgaatttaaaatgttaatttttgcttataatagtgaccggagg 40639849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 500 - 639
Target Start/End: Original strand, 8439259 - 8439398
Alignment:
Q  500 ctccggtcactattataattaaaaacttactttttagattcattgaacgattgatgtatgagatcattaatatagactatatacatcatttattcaatga 599  Q
    |||||||||||| |||||  |||||  ||| |||||| |||||| |   | ||||||||| | ||  ||||| ||||||| | ||||||| | | |||||    
T  8439259 ctccggtcactaatataagcaaaaaactacattttaggttcattcatttaatgatgtatgtggtctataataaagactatgtgcatcattaaatgaatga 8439358  T
Q  600 atttaaaaaataattttttgcttataatagtggccggagg 639  Q
    |  ||||| ||||||||||||||||| ||||| |||||||    
T  8439359 acctaaaatataattttttgcttatattagtgaccggagg 8439398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 580 - 623
Target Start/End: Original strand, 11041620 - 11041663
Alignment:
Q  580 atacatcatttattcaatgaatttaaaaaataattttttgctta 623  Q
    |||||||||||||||| |||||||||||| | ||||||||||||    
T  11041620 atacatcatttattcagtgaatttaaaaagtgattttttgctta 11041663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 552 - 631
Target Start/End: Complemental strand, 29389414 - 29389335
Alignment:
Q  552 gatgtatgagatcattaatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtg 631  Q
    |||||||| ||||  ||||| |||  |||||||||||| ||| || |||| ||||| |||| ||||||||||||||||||    
T  29389414 gatgtatgtgatctataataaagatcatatacatcattaattgaacgaatctaaaatataaatttttgcttataatagtg 29389335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 580 - 639
Target Start/End: Complemental strand, 54273458 - 54273399
Alignment:
Q  580 atacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggagg 639  Q
    ||||||||||||||||||||| ||||||  | |  ||||||||||||||||| |||||||    
T  54273458 atacatcatttattcaatgaacttaaaactttaacttttgcttataatagtgaccggagg 54273399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 569 - 631
Target Start/End: Complemental strand, 611652 - 611590
Alignment:
Q  569 atatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtg 631  Q
    |||||||||| |||||||||||||| ||| ||| ||||||| ||  |||| ||||||||||||    
T  611652 atatagactacatacatcatttattgaattaatctaaaaaacaaacttttacttataatagtg 611590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 580 - 638
Target Start/End: Original strand, 2313002 - 2313060
Alignment:
Q  580 atacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggag 638  Q
    |||||||| ||||||||||||||| |||||| | | |||| ||||||||||| ||||||    
T  2313002 atacatcaattattcaatgaatttgaaaaatgaatatttgattataatagtgaccggag 2313060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 581 - 639
Target Start/End: Complemental strand, 9170170 - 9170112
Alignment:
Q  581 tacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggagg 639  Q
    |||||||||||   ||||||| |||||  |||||||||||||||||||||| |||||||    
T  9170170 tacatcatttaacgaatgaatctaaaatgtaattttttgcttataatagtgaccggagg 9170112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 581 - 631
Target Start/End: Original strand, 45736769 - 45736819
Alignment:
Q  581 tacatcatttattcaatgaatttaaaaaataattttttgcttataatagtg 631  Q
    ||||||||| ||| ||||||||||||| ||||  |||||||||||||||||    
T  45736769 tacatcattaattgaatgaatttaaaatataaaattttgcttataatagtg 45736819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 580 - 637
Target Start/End: Complemental strand, 105431 - 105374
Alignment:
Q  580 atacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccgga 637  Q
    |||||||||||||||||||||| |||||| | | |||||| ||| ||||||| |||||    
T  105431 atacatcatttattcaatgaatctaaaaagtgaatttttgtttacaatagtgaccgga 105374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 567 - 624
Target Start/End: Original strand, 4980341 - 4980398
Alignment:
Q  567 taatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttat 624  Q
    ||||| |||||| |||||||||||||| ||||||| ||||| || | |||||||||||    
T  4980341 taataaagactacatacatcatttattgaatgaatctaaaatatgaatttttgcttat 4980398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 570 - 631
Target Start/End: Complemental strand, 24722756 - 24722695
Alignment:
Q  570 tatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtg 631  Q
    ||||||| | |||||||||||| | ||||||| ||||| || | ||||||||||||||||||    
T  24722756 tatagaccacatacatcatttaataaatgaatctaaaatattaatttttgcttataatagtg 24722695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 580 - 637
Target Start/End: Original strand, 36270070 - 36270127
Alignment:
Q  580 atacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccgga 637  Q
    ||||| || ||||||||||||  ||||||||  ||||||||||||||||||| |||||    
T  36270070 atacaccagttattcaatgaacataaaaaatggttttttgcttataatagtgaccgga 36270127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 531 - 644
Target Start/End: Original strand, 37897714 - 37897827
Alignment:
Q  531 ttttagattcattgaacgattgatgtatgagatcattaatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagt 630  Q
    ||||||||||||| ||  | ||||||||  |||| ||| ||||||| | |||||| ||||| | |||||||||||||  |   |||||||||||||||||    
T  37897714 ttttagattcattcaattaatgatgtatatgatctttattatagaccacatacataatttaatgaatgaatttaaaatgttgatttttgcttataatagt 37897813  T
Q  631 ggccggaggaagta 644  Q
    | || |||| ||||    
T  37897814 gaccagagggagta 37897827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 567 - 628
Target Start/End: Original strand, 40169068 - 40169129
Alignment:
Q  567 taatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataata 628  Q
    ||||| |||||| |||||| ||| ||| |||||| ||||||||| | |||||||||||||||    
T  40169068 taatacagactaaatacattattaattgaatgaacttaaaaaattaatttttgcttataata 40169129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 579 - 644
Target Start/End: Original strand, 50335001 - 50335065
Alignment:
Q  579 tatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggaggaagta 644  Q
    ||||||| | |||||||||  || |||||||||| |||| ||||||||||||| ||||||||||||    
T  50335001 tatacattaattattcaatatatctaaaaaataaatttt-gcttataatagtgaccggaggaagta 50335065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 68; Significance: 6e-30; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 501 - 631
Target Start/End: Original strand, 12736357 - 12736488
Alignment:
Q  501 tccggtcactattataattaaaaacttactttttagattcattgaacgattgatgtatgagatcattaatatagactatatacatcatttattcaatgaa 600  Q
    |||||| ||||||||||  |||||  |||||||||| ||||||||| |||||||||||| |||||||||| ||||| |||||||||||||||||||||||    
T  12736357 tccggttactattataagcaaaaaactactttttaggttcattgaatgattgatgtatgtgatcattaatgtagaccatatacatcatttattcaatgaa 12736456  T
Q  601 tttaaaaaata-attttttgcttataatagtg 631  Q
      ||| |||||  |||||||||||||||||||    
T  12736457 cctaagaaatagtttttttgcttataatagtg 12736488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 500 - 653
Target Start/End: Complemental strand, 10934742 - 10934589
Alignment:
Q  500 ctccggtcactattataattaaaaacttactttttagattcattgaacgattgatgtatgagatcattaatatagactatatacatcatttattcaatga 599  Q
    ||||||||||||||||||  |||||   || ||||||||||||| |   | ||||||||| | ||   |||| |||||| |||||||||| ||| |||||    
T  10934742 ctccggtcactattataagcaaaaatcaacattttagattcattcattaaatgatgtatgtggtctacaataaagactacatacatcattaattaaatga 10934643  T
Q  600 atttaaaaaataattttttgcttataatagtggccggaggaagtactatatttt 653  Q
    || ||||| ||| ||||||||||||||||||| |||||||  |||| |||||||    
T  10934642 atgtaaaatatagttttttgcttataatagtgaccggagggtgtacaatatttt 10934589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 572 - 631
Target Start/End: Complemental strand, 13841915 - 13841856
Alignment:
Q  572 tagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtg 631  Q
    ||||||| |||||||||||||| |||||||||||||| ||| ||||||||||||||||||    
T  13841915 tagactaaatacatcatttattgaatgaatttaaaaagtaaatttttgcttataatagtg 13841856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 500 - 631
Target Start/End: Complemental strand, 24820436 - 24820306
Alignment:
Q  500 ctccggtcactattataattaaaaacttactttttagattcattgaacgattgatgtatgagatcattaatatagactatatacatcatttattcaatga 599  Q
    ||||||||||||||||||  ||||| |  ||||||||||||||| ||  | ||||||||| |||| || ||||| || | |||||||||||||| |||||    
T  24820436 ctccggtcactattataagcaaaaattctctttttagattcattcaataaatgatgtatgtgatc-tttatataaaccacatacatcatttattgaatga 24820338  T
Q  600 atttaaaaaataattttttgcttataatagtg 631  Q
    |  ||| || | | ||||||||||||||||||    
T  24820337 acctaagaagtgaatttttgcttataatagtg 24820306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 500 - 628
Target Start/End: Original strand, 2627175 - 2627303
Alignment:
Q  500 ctccggtcactattataattaaaaacttactttttagattcattgaacgattgatgtatgagatcattaatatagactatatacatcatttattcaatga 599  Q
    ||||||||||||||||||  | ||  | |||||||||||||||| ||  | | ||||||  | ||| |||||||||||| ||||| |||||||| |||||    
T  2627175 ctccggtcactattataagcataagataactttttagattcattcaataaataatgtatttggtcaataatatagactaaatacaccatttattgaatga 2627274  T
Q  600 atttaaaaaataattttttgcttataata 628  Q
    | ||||||| | | |||||||| ||||||    
T  2627275 acttaaaaagttaatttttgctaataata 2627303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 565 - 637
Target Start/End: Original strand, 24052894 - 24052966
Alignment:
Q  565 attaatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccgga 637  Q
    ||||||||| || |||||||||||||||||||||||  |||||| ||  |||||| ||||||||||| |||||    
T  24052894 attaatataaaccatatacatcatttattcaatgaacctaaaaagtagatttttgtttataatagtgaccgga 24052966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 580 - 631
Target Start/End: Original strand, 1988924 - 1988975
Alignment:
Q  580 atacatcatttattcaatgaatttaaaaaataattttttgcttataatagtg 631  Q
    |||||||||||||||||| |||||||||||||  |||||| |||||||||||    
T  1988924 atacatcatttattcaataaatttaaaaaatatatttttgtttataatagtg 1988975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 504 - 639
Target Start/End: Original strand, 5888341 - 5888476
Alignment:
Q  504 ggtcactattataattaaaaacttactttttagattcattgaacgattgatgtatgagatcattaatatagactatatacatcatttattcaatgaattt 603  Q
    ||||||||||||||  ||||| | || ||||||||||||| |   | |||||||||   ||  ||||| |||| |||||||||||| ||| ||||||| |    
T  5888341 ggtcactattataagcaaaaattaacgttttagattcattcattaaatgatgtatgttgtctataataaagaccatatacatcattaattgaatgaatct 5888440  T
Q  604 aaaaaataattttttgcttataatagtggccggagg 639  Q
    | ||| ||  |||||||||||||||||| |||||||    
T  5888441 acaaagtagatttttgcttataatagtgcccggagg 5888476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 500 - 631
Target Start/End: Complemental strand, 5888475 - 5888344
Alignment:
Q  500 ctccggtcactattataattaaaaacttactttttagattcattgaacgattgatgtatgagatcattaatatagactatatacatcatttattcaatga 599  Q
    |||||| |||||||||||  |||||  |||||| |||||||||| ||  | ||||||||  | || ||| ||||||| | |||||||||||| | |||||    
T  5888475 ctccgggcactattataagcaaaaatctactttgtagattcattcaattaatgatgtatatggtctttattatagacaacatacatcatttaatgaatga 5888376  T
Q  600 atttaaaaaataattttttgcttataatagtg 631  Q
    || |||||  | | ||||||||||||||||||    
T  5888375 atctaaaacgttaatttttgcttataatagtg 5888344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 566 - 608
Target Start/End: Original strand, 9812493 - 9812535
Alignment:
Q  566 ttaatatagactatatacatcatttattcaatgaatttaaaaa 608  Q
    ||||||| |||||||||||||||||||||||| ||||||||||    
T  9812493 ttaatattgactatatacatcatttattcaataaatttaaaaa 9812535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 577 - 631
Target Start/End: Original strand, 28480717 - 28480771
Alignment:
Q  577 tatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtg 631  Q
    ||||||||| ||||||| |||||||||| ||||||  ||||||||||||||||||    
T  28480717 tatatacataatttattgaatgaatttagaaaatacatttttgcttataatagtg 28480771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 501 - 558
Target Start/End: Original strand, 6883627 - 6883684
Alignment:
Q  501 tccggtcactattataattaaaaacttactttttagattcattgaacgattgatgtat 558  Q
    |||| |||||||||||| |||||| |||||||||||||||| ||||  ||||||||||    
T  6883627 tccgatcactattataaataaaaagttactttttagattcaatgaataattgatgtat 6883684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 528 - 601
Target Start/End: Complemental strand, 10184666 - 10184593
Alignment:
Q  528 actttttagattcattgaacgattgatgtatgagatcattaatatagactatatacatcatttattcaatgaat 601  Q
    |||||||||||||||||||  ||||||||||  ||||   ||||||||| | ||||||||||||| ||||||||    
T  10184666 actttttagattcattgaataattgatgtatatgatccagaatatagaccaaatacatcatttatacaatgaat 10184593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 569 - 626
Target Start/End: Original strand, 30114812 - 30114868
Alignment:
Q  569 atatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataa 626  Q
    |||||||| | |||||| | |||||||||||||||||||||| |||||||||||||||    
T  30114812 atatagaccaaatacattagttattcaatgaatttaaaaaat-attttttgcttataa 30114868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 531 - 608
Target Start/End: Original strand, 43295920 - 43295997
Alignment:
Q  531 ttttagattcattgaacgattgatgtatgagatcattaatatagactatatacatcatttattcaatgaatttaaaaa 608  Q
    ||||||||||||| || || ||||||||| | ||  || ||||||| | |||||||||||||| ||||||||||||||    
T  43295920 ttttagattcattcaatgaatgatgtatgtggtccatattatagaccacatacatcatttattgaatgaatttaaaaa 43295997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 501 - 601
Target Start/End: Complemental strand, 10117108 - 10117008
Alignment:
Q  501 tccggtcactattataattaaaaacttactttttagattcattgaacgattgatgtatgagatcattaatatagactatatacatcatttattcaatgaa 600  Q
    |||||||||||||||||  ||||| |||| ||||||||||||| ||  | ||||||||  |||  ||| ||||||| | |||||||||||| | ||||||    
T  10117108 tccggtcactattataagcaaaaatttacattttagattcattcaattaatgatgtatatgatatttattatagaccacatacatcatttaatgaatgaa 10117009  T
Q  601 t 601  Q
    |    
T  10117008 t 10117008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 567 - 631
Target Start/End: Complemental strand, 13964491 - 13964427
Alignment:
Q  567 taatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtg 631  Q
    |||||||||| | |||||||||||||| |||||||||||||  |   ||||||||||||||||||    
T  13964491 taatatagaccacatacatcatttattgaatgaatttaaaatgttgatttttgcttataatagtg 13964427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 567 - 631
Target Start/End: Original strand, 17871831 - 17871895
Alignment:
Q  567 taatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtg 631  Q
    |||||||||||| |||||||||||| | ||||||  ||||||||   ||||||||||||||||||    
T  17871831 taatatagactaaatacatcatttaatgaatgaacctaaaaaattgatttttgcttataatagtg 17871895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 580 - 644
Target Start/End: Complemental strand, 44329216 - 44329152
Alignment:
Q  580 atacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggaggaagta 644  Q
    |||||| | |||||||||| ||||||||||| |||||||||||||||| ||| | ||||| ||||    
T  44329216 atacattaattattcaatgtatttaaaaaatcattttttgcttataattgtgactggagggagta 44329152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 528 - 607
Target Start/End: Original strand, 6189663 - 6189742
Alignment:
Q  528 actttttagattcattgaacgattgatgtatgagatcattaatatagactatatacatcatttattcaatgaatttaaaa 607  Q
    ||||||||| ||||| |||  | ||||||||  | ||| |||||||||||| |||||||||||||| ||||||| |||||    
T  6189663 actttttaggttcatcgaataaatgatgtatttggtcaataatatagactaaatacatcatttattgaatgaatctaaaa 6189742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 578 - 637
Target Start/End: Original strand, 10117049 - 10117108
Alignment:
Q  578 atatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccgga 637  Q
    |||||||||||| ||| ||||||| |||||  ||| |||||||||||||||||| |||||    
T  10117049 atatacatcattaattgaatgaatctaaaatgtaaatttttgcttataatagtgaccgga 10117108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 569 - 628
Target Start/End: Complemental strand, 20269834 - 20269775
Alignment:
Q  569 atatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataata 628  Q
    ||||| || |||||||||||||||| ||| ||  ||||||||||||||||| ||||||||    
T  20269834 atataaaccatatacatcatttattgaataaacctaaaaaataattttttgtttataata 20269775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 569 - 628
Target Start/End: Complemental strand, 21056463 - 21056404
Alignment:
Q  569 atatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataata 628  Q
    ||||| || |||||||||||||||| ||| ||  ||||||||||||||||| ||||||||    
T  21056463 atataaaccatatacatcatttattgaataaacctaaaaaataattttttgtttataata 21056404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 500 - 639
Target Start/End: Complemental strand, 24287924 - 24287785
Alignment:
Q  500 ctccggtcactattataattaaaaacttactttttagattcattgaacgattgatgtatgagatcattaatatagactatatacatcatttattcaatga 599  Q
    ||||||||| |||||||| |||||  || | ||||||||| ||| |   | ||||||||  | || ||| ||||||| |||||||||||||| | |||||    
T  24287924 ctccggtcattattataagtaaaactttgcattttagatttattcagttaatgatgtatatggtctttattatagaccatatacatcatttaatgaatga 24287825  T
Q  600 atttaaaaaataattttttgcttataatagtggccggagg 639  Q
    || |||||   ||  ||||||||||||||||| |||||||    
T  24287824 atctaaaatgcaaagttttgcttataatagtgaccggagg 24287785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 580 - 639
Target Start/End: Original strand, 24820378 - 24820437
Alignment:
Q  580 atacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggagg 639  Q
    |||||||||||||| ||||||| ||||||   | |||||||||||||||||| |||||||    
T  24820378 atacatcatttattgaatgaatctaaaaagagaatttttgcttataatagtgaccggagg 24820437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 500 - 639
Target Start/End: Complemental strand, 33070304 - 33070165
Alignment:
Q  500 ctccggtcactattataattaaaaacttactttttagattcattgaacgattgatgtatgagatcattaatatagactatatacatcatttattcaatga 599  Q
    ||||||||||||||||||  ||||  || | ||||||||||||| |   | || |||||  | || ||| ||||||||| |||||||||||| | |||||    
T  33070304 ctccggtcactattataagcaaaattttgcattttagattcattcatttaatggtgtatatggtctttattatagactacatacatcatttaatgaatga 33070205  T
Q  600 atttaaaaaataattttttgcttataatagtggccggagg 639  Q
    || ||||| | ||  |||||||||||| |||| |||||||    
T  33070204 atctaaaatacaaagttttgcttataacagtgaccggagg 33070165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 567 - 610
Target Start/End: Original strand, 34181571 - 34181614
Alignment:
Q  567 taatatagactatatacatcatttattcaatgaatttaaaaaat 610  Q
    ||||||| |||| |||||||||||||||||||||||| ||||||    
T  34181571 taatataaactaaatacatcatttattcaatgaatttgaaaaat 34181614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 531 - 601
Target Start/End: Original strand, 8793755 - 8793825
Alignment:
Q  531 ttttagattcattgaacgattgatgtatgagatcattaatatagactatatacatcatttattcaatgaat 601  Q
    |||||||||||||||   ||||||||||  | ||  |||||||||||| ||||||||||||| ||||||||    
T  8793755 ttttagattcattgagtaattgatgtatttggtctataatatagactaaatacatcatttatgcaatgaat 8793825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 500 - 640
Target Start/End: Original strand, 15037751 - 15037892
Alignment:
Q  500 ctccggtcactattataattaaaaacttactttttagattcattgaacgattgatgtatg-agatcattaatatagactatatacatcatttattcaatg 598  Q
    ||||||||| ||||||||  |||||  |||||||||| |||||| ||  | ||||||||| || ||||||| |||| | | | |||||||||||| ||||    
T  15037751 ctccggtcagtattataaacaaaaatctactttttaggttcattcaataaatgatgtatgtagttcattaa-ataggccacacacatcatttattgaatg 15037849  T
Q  599 aatttaaaaaa-taattttttgcttataatagtggccggagga 640  Q
    ||  ||||||| |||  |||| |||||||||||| ||||||||    
T  15037850 aacctaaaaaaataaaattttacttataatagtgaccggagga 15037892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 500 - 625
Target Start/End: Original strand, 15285654 - 15285779
Alignment:
Q  500 ctccggtcactattataattaaaaacttactttttagattcattgaacgattgatgtatgagatcat-taatatagactatatacatcatttattcaatg 598  Q
    ||||||||| || ||||| |||||| ||| |||||| || |||| ||  | ||||||||| || ||| ||||| |||||||||||||| || ||| ||||    
T  15285654 ctccggtcattaatataaataaaaatttattttttaaatacatttaattaatgatgtatgtga-catataataaagactatatacatccttaattgaatg 15285752  T
Q  599 aatttaaaaaataattttttgcttata 625  Q
     ||||||||| ||| |||||| |||||    
T  15285753 tatttaaaaagtaaatttttgtttata 15285779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 500 - 625
Target Start/End: Original strand, 15466023 - 15466148
Alignment:
Q  500 ctccggtcactattataattaaaaacttactttttagattcattgaacgattgatgtatgagatcat-taatatagactatatacatcatttattcaatg 598  Q
    ||||||||| || ||||| |||||| ||| |||||| || |||| ||  | ||||||||| || ||| ||||| |||||||||||||| || ||| ||||    
T  15466023 ctccggtcattaatataaataaaaatttattttttaaatacatttaattaatgatgtatgtga-catataataaagactatatacatccttaattgaatg 15466121  T
Q  599 aatttaaaaaataattttttgcttata 625  Q
     ||||||||| ||| |||||| |||||    
T  15466122 tatttaaaaagtaaatttttgtttata 15466148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 561 - 639
Target Start/End: Original strand, 31271594 - 31271672
Alignment:
Q  561 gatcattaatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggagg 639  Q
    ||||| ||||| |||||| |||||||| ||||| ||| ||||| |||| |   |||||||||||||||||| |||||||    
T  31271594 gatcaataatacagactaaatacatcacttattgaataaatttgaaaagttgatttttgcttataatagtgaccggagg 31271672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 567 - 637
Target Start/End: Original strand, 41387830 - 41387900
Alignment:
Q  567 taatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccgga 637  Q
    ||||| |||| | |||||| ||||| | ||||||| ||||| ||| ||||||||||||||||||| |||||    
T  41387830 taataaagaccacatacattatttaatgaatgaatctaaaatatagttttttgcttataatagtgaccgga 41387900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 570 - 640
Target Start/End: Complemental strand, 42749124 - 42749054
Alignment:
Q  570 tatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggagga 640  Q
    ||||||||| |||||||||||| | ||||||| ||||||  ||  ||||||||||| ||||| ||||||||    
T  42749124 tatagactacatacatcatttaatgaatgaatctaaaaatcaaacttttgcttatattagtgaccggagga 42749054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 570 - 639
Target Start/End: Complemental strand, 24053666 - 24053597
Alignment:
Q  570 tatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggagg 639  Q
    ||||||| | |||||||||| | | ||||||  ||||| ||||||||||||||||| ||||| |||||||    
T  24053666 tatagaccacatacatcattaaatgaatgaacctaaaatataattttttgcttatattagtgaccggagg 24053597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 569 - 626
Target Start/End: Original strand, 24418950 - 24419007
Alignment:
Q  569 atatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataa 626  Q
    |||||||| | |||||||||||||| ||||||| |||||| | | |||||||||||||    
T  24418950 atatagacgacatacatcatttattgaatgaatctaaaaagtgaatttttgcttataa 24419007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 500 - 628
Target Start/End: Complemental strand, 37509074 - 37508946
Alignment:
Q  500 ctccggtcactattataattaaaaacttactttttagattcattgaacgattgatgtatgagatcattaatatagactatatacatcatttattcaatga 599  Q
    ||||||| |||||||||| |||||  | | ||||||  |||||| ||  | ||||||||| ||| ||  ||||| |||| ||| || ||||||| |||||    
T  37509074 ctccggttactattataagtaaaagttgattttttaacttcatttaataaatgatgtatgtgat-atatatatatactacatatattatttattgaatga 37508976  T
Q  600 atttaaaaaat-aattttttgcttataata 628  Q
    ||||||||||| ||||||||| ||||||||    
T  37508975 atttaaaaaatgaattttttgtttataata 37508946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 569 - 610
Target Start/End: Complemental strand, 38779303 - 38779262
Alignment:
Q  569 atatagactatatacatcatttattcaatgaatttaaaaaat 610  Q
    ||||||| ||||||||| ||||||||||| ||||||||||||    
T  38779303 atatagaatatatacattatttattcaataaatttaaaaaat 38779262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 57; Significance: 2e-23; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 500 - 636
Target Start/End: Original strand, 3967706 - 3967842
Alignment:
Q  500 ctccggtcactattataattaaaaacttactttttagattcattgaacgattgatgtatgagatcattaatatagactatatacatcatttattcaatga 599  Q
    ||||| ||||||||||||  |||||  |||||||||| ||||||||| || |||||||   || ||||||||||| | | ||||||||||||||||||||    
T  3967706 ctccgatcactattataagcaaaaaactactttttaggttcattgaatgagtgatgtaattgaccattaatatagtccacatacatcatttattcaatga 3967805  T
Q  600 atttaaaaaataattttttgcttataatagtggccgg 636  Q
    |  |||||| || ||||||||||||||||||| ||||    
T  3967806 acctaaaaagtagttttttgcttataatagtgaccgg 3967842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 500 - 644
Target Start/End: Complemental strand, 37491412 - 37491268
Alignment:
Q  500 ctccggtcactattataattaaaaacttactttttagattcattgaacgattgatgtatgagatcattaatatagactatatacatcatttattcaatga 599  Q
    |||| |||||||||||||| ||||  |||||||||||||||||| ||  | ||||||||  | ||| | |||||||||| |||||||||||||| ||| |    
T  37491412 ctccagtcactattataatcaaaagtttactttttagattcatttaataaatgatgtatatggtcacttatatagactacatacatcatttatttaataa 37491313  T
Q  600 atttaaaaaataattttttgcttataatagtggccggaggaagta 644  Q
    || |||||| ||| |||||||||||||||||| ||  ||||||||    
T  37491312 atctaaaaagtaaatttttgcttataatagtgaccaaaggaagta 37491268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 528 - 639
Target Start/End: Complemental strand, 43813236 - 43813125
Alignment:
Q  528 actttttagattcattgaacgattgatgtatgagatcattaatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataat 627  Q
    |||| ||||||||||| ||  | ||||||||| | ||| || ||||||||| |||| ||||||||| ||||||| |||||| ||| ||||||||||||||    
T  43813236 acttcttagattcattcaataaatgatgtatgtggtcaatattatagactacatacttcatttattgaatgaatctaaaaattaaatttttgcttataat 43813137  T
Q  628 agtggccggagg 639  Q
    |||| |||||||    
T  43813136 agtgaccggagg 43813125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 500 - 644
Target Start/End: Original strand, 47534971 - 47535116
Alignment:
Q  500 ctccggtcactattataattaaaaacttactttttagattcattgaacgattgatgtatgagatcattaatatagactatatacatcatttattcaatga 599  Q
    ||||||||||||||||||  |||||  |||||||||  |||||| || || ||||||||    |||||||||| ||| | |||||||||||||| |||||    
T  47534971 ctccggtcactattataagcaaaaaactactttttaagttcattaaatgagtgatgtatcttgtcattaatatggaccacatacatcatttattgaatga 47535070  T
Q  600 atttaaaa-aataattttttgcttataatagtggccggaggaagta 644  Q
    || |||||   || |||||||||||||||||||  |||||| ||||    
T  47535071 atctaaaaggttatttttttgcttataatagtgatcggagggagta 47535116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 591 - 644
Target Start/End: Complemental strand, 47712527 - 47712474
Alignment:
Q  591 attcaatgaatttaaaaaataattttttgcttataatagtggccggaggaagta 644  Q
    |||||||||| || ||||||| ||||||||||||||||||||||||||||||||    
T  47712527 attcaatgaacttcaaaaatagttttttgcttataatagtggccggaggaagta 47712474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 500 - 631
Target Start/End: Complemental strand, 23797487 - 23797356
Alignment:
Q  500 ctccggtcactattataattaaaaacttactttttagattcattgaacgattgatgtatgagatcattaatatagactatatacatcatttattcaatga 599  Q
    |||||||||||||||||| |||||  || | ||||||||||||| ||  | ||||||||  | || ||| ||||||||| |||||||||||| | |||||    
T  23797487 ctccggtcactattataagtaaaattttgcattttagattcattcaattaatgatgtatctggtctttattatagactacatacatcatttaatgaatga 23797388  T
Q  600 atttaaaaaataattttttgcttataatagtg 631  Q
    || |||||   ||  |||||||||||||||||    
T  23797387 atctaaaatgcaaaattttgcttataatagtg 23797356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 501 - 600
Target Start/End: Original strand, 47708403 - 47708502
Alignment:
Q  501 tccggtcactattataattaaaaacttactttttagattcattgaacgattgatgtatgagatcattaatatagactatatacatcatttattcaatgaa 600  Q
    |||| ||||||||||||  |||||  |||||||||  ||||||||| || |||||||||   |||||||||||||| | |||||||||||||| ||||||    
T  47708403 tccgatcactattataagcaaaaaactactttttaagttcattgaatgagtgatgtatgttgtcattaatatagaccacatacatcatttattaaatgaa 47708502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 567 - 637
Target Start/End: Original strand, 34478303 - 34478373
Alignment:
Q  567 taatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccgga 637  Q
    |||||||||| | |||||||||||| | ||||||| |||||||| | |||||||||||||||||| |||||    
T  34478303 taatatagaccaaatacatcatttagtaaatgaatctaaaaaattaatttttgcttataatagtgaccgga 34478373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 519 - 617
Target Start/End: Original strand, 47538780 - 47538877
Alignment:
Q  519 taaaaacttactttttagattcattgaacgattgatgtatgagatcattaatatagactatatacatcatttattcaatgaatttaaaaaataattttt 617  Q
    |||||| ||| |||||||||| ||||||  ||||||||||  | ||| |||||||||||||||||||||||| || ||||||| ||| || ||||||||    
T  47538780 taaaaagttaatttttagatttattgaataattgatgtatttggtcaataatatagactatatacatcattt-ttaaatgaatctaagaagtaattttt 47538877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 519 - 617
Target Start/End: Original strand, 47545337 - 47545434
Alignment:
Q  519 taaaaacttactttttagattcattgaacgattgatgtatgagatcattaatatagactatatacatcatttattcaatgaatttaaaaaataattttt 617  Q
    |||||| ||| |||||||||| ||||||  ||||||||||  | ||| |||||||||||||||||||||||| || ||||||| ||| || ||||||||    
T  47545337 taaaaagttaatttttagatttattgaataattgatgtatttggtcaataatatagactatatacatcattt-ttaaatgaatctaagaagtaattttt 47545434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 500 - 644
Target Start/End: Complemental strand, 34750468 - 34750323
Alignment:
Q  500 ctccggtcactattataattaaaaact-tactttttagattcattgaacgattgatgtatgagatcattaatatagactatatacatcatttattcaatg 598  Q
    ||||||||||||||||||  |||||   |||||||||  |||||||||  | ||||||| | | ||||| || ||||| |||||||||||||||||  ||    
T  34750468 ctccggtcactattataagcaaaaaaactactttttaagttcattgaataagtgatgtacgtggtcattgatttagaccatatacatcatttattcggtg 34750369  T
Q  599 aatttaaaaaataattttttgcttataatagtggccggaggaagta 644  Q
    ||  |||||| ||  |||||||||||||||||  ||||||| ||||    
T  34750368 aacctaaaaagtagatttttgcttataatagtaaccggagggagta 34750323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 500 - 631
Target Start/End: Original strand, 1706834 - 1706965
Alignment:
Q  500 ctccggtcactattataattaaaaacttactttttagattcattgaacgattgatgtatgagatcat-taatatagactatatacatcatttattcaatg 598  Q
    |||||||||||| ||||| |||||| ||| ||||||||| |||| ||  | ||||||||| || ||| ||||| |||| |||||||||||| | | ||||    
T  1706834 ctccggtcactaatataagtaaaaatttattttttagatacattcaattaatgatgtatgtga-catataataaagaccatatacatcattaaatgaatg 1706932  T
Q  599 aatttaaaaaataattttttgcttataatagtg 631  Q
     || |||||||| | |||||||||||| |||||    
T  1706933 tatctaaaaaatgaatttttgcttatattagtg 1706965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 500 - 596
Target Start/End: Original strand, 2456337 - 2456433
Alignment:
Q  500 ctccggtcactattataattaaaaacttactttttagattcattgaacgattgatgtatgagatcattaatatagactatatacatcatttattcaa 596  Q
    ||||| ||||||||||||  |||||  |||||||||| |||||||||  | ||||||||| |  ||||||||||||| | ||| |||||||||||||    
T  2456337 ctccgatcactattataagcaaaaatctactttttaggttcattgaattaatgatgtatgtggacattaatatagaccacatatatcatttattcaa 2456433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 569 - 645
Target Start/End: Original strand, 8169166 - 8169242
Alignment:
Q  569 atatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggaggaagtac 645  Q
    |||||||||| |||||||||||||| ||||||| |||||| | |  ||||||||||||||||  ||||| |||||||    
T  8169166 atatagactacatacatcatttattgaatgaatctaaaaagttaacttttgcttataatagtaaccggatgaagtac 8169242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 503 - 639
Target Start/End: Complemental strand, 8447853 - 8447717
Alignment:
Q  503 cggtcactattataattaaaaacttactttttagattcattgaacgattgatgtatgagatcattaatatagactatatacatcatttattcaatgaatt 602  Q
    |||||||||||||||  |||||  ||| ||||||||||||| |  || ||||| |   |||| ||| ||||||| |||||||||||| | | ||||||      
T  8447853 cggtcactattataagcaaaaatctacattttagattcattcattgaatgatgcacatgatctttattatagaccatatacatcattaaatgaatgaacc 8447754  T
Q  603 taaaaaataattttttgcttataatagtggccggagg 639  Q
    ||||| ||| ||||||||||||| ||||| |||||||    
T  8447753 taaaatatagttttttgcttatattagtgaccggagg 8447717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 500 - 640
Target Start/End: Complemental strand, 10422947 - 10422807
Alignment:
Q  500 ctccggtcactattataattaaaaacttactttttagattcattgaacgattgatgtatgagatcattaatatagactatatacatcatttattcaatga 599  Q
    |||||||||||| |||||  ||||| ||| |||||||||||||| |   | ||| |||||  | | ||| ||||||||| |||| |||||||   |||||    
T  10422947 ctccggtcactaatataagcaaaaatttaatttttagattcattcattaaatgacgtatgtaaactttattatagactacatacgtcatttaacgaatga 10422848  T
Q  600 atttaaaaaataattttttgcttataatagtggccggagga 640  Q
    || |||||| ||| |||||||||||| ||||| ||||||||    
T  10422847 atctaaaaattaaatttttgcttatattagtgaccggagga 10422807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 503 - 631
Target Start/End: Complemental strand, 44182657 - 44182530
Alignment:
Q  503 cggtcactattataattaaaaacttactttttagattcattgaacgattgatgtatgagatcattaatatagactatatacatcatttattcaatgaatt 602  Q
    ||||||||||||||||  |||||  |||||||| ||||||||||  | ||||||||  | ||   ||||  ||||  ||||||||||||||||||||| |    
T  44182657 cggtcactattataatcgaaaacaaactttttatattcattgaataaatgatgtatttggtctacaataacgacttgatacatcatttattcaatgaa-t 44182559  T
Q  603 taaaaaataattttttgcttataatagtg 631  Q
     |||||||  |||||||||||||||||||    
T  44182558 caaaaaattgttttttgcttataatagtg 44182530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 503 - 637
Target Start/End: Original strand, 2943216 - 2943350
Alignment:
Q  503 cggtcactattataattaaaaacttactttttagattcattgaacgattgatgtatgagatcattaatatagactatatacatcatttattcaatgaatt 602  Q
    |||||||||||||||  |||||   || ||||||||||||| |   | ||||||||| | ||   |||| ||| || |||||| ||| ||| |||||||     
T  2943216 cggtcactattataagcaaaaatcaacattttagattcattcattaaatgatgtatgtggtctacaataaagagtacatacattattaattgaatgaatg 2943315  T
Q  603 taaaaaataattttttgcttataatagtggccgga 637  Q
    ||||| ||||||||||||||||||||||| |||||    
T  2943316 taaaatataattttttgcttataatagtgaccgga 2943350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 506 - 600
Target Start/End: Original strand, 3105953 - 3106047
Alignment:
Q  506 tcactattataattaaaaacttactttttagattcattgaacgattgatgtatgagatcattaatatagactatatacatcatttattcaatgaa 600  Q
    ||||||||||||  ||||| ||| ||||||| || |||||| || || |||||  || ||||||||||||| | |||||||||||||| ||||||    
T  3105953 tcactattataagcaaaaaattattttttaggtttattgaatgagtgttgtatatgaccattaatatagaccacatacatcatttattgaatgaa 3106047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 570 - 628
Target Start/End: Complemental strand, 24617866 - 24617808
Alignment:
Q  570 tatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataata 628  Q
    |||||||||||||||| ||||||| ||||||| |||||||||  |||||| ||||||||    
T  24617866 tatagactatatacattatttattgaatgaatctaaaaaatacatttttgtttataata 24617808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 505 - 631
Target Start/End: Original strand, 27554503 - 27554629
Alignment:
Q  505 gtcactattataattaaaaacttactttttagattcattgaacgattgatgtatgagatcattaatatagactatatacatcatttattcaatgaattta 604  Q
    ||||||| ||||| |||||| ||| ||||||||| |||| ||  | ||||||||| |||| ||| |||| |  | |||||||||| ||| |||| ||||     
T  27554503 gtcactaatataaataaaaatttattttttagatacattcaattaatgatgtatgtgatctttattatatatcacatacatcattaattgaatgtatttt 27554602  T
Q  605 aaaaataattttttgcttataatagtg 631  Q
    |||| ||| |||||||||||| |||||    
T  27554603 aaaagtaaatttttgcttatattagtg 27554629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 570 - 639
Target Start/End: Complemental strand, 8595216 - 8595147
Alignment:
Q  570 tatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggagg 639  Q
    ||||||||| |||||||||||| | ||||||| |||||||||| ||||| |||||| | ||| |||||||    
T  8595216 tatagactacatacatcatttaatgaatgaatctaaaaaataaattttttcttatatttgtgaccggagg 8595147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 570 - 639
Target Start/End: Complemental strand, 16777961 - 16777892
Alignment:
Q  570 tatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggagg 639  Q
    ||||||||| |||||||||||| | ||||||| |||||| |||  ||||||||||| ||||| |||||||    
T  16777961 tatagactacatacatcatttaataaatgaatctaaaaattaaacttttgcttatattagtgaccggagg 16777892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 570 - 631
Target Start/End: Original strand, 31319587 - 31319648
Alignment:
Q  570 tatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtg 631  Q
    ||||||||| ||||||||||| || ||||||| |||||||||  ||||| ||||||||||||    
T  31319587 tatagactacatacatcattttttgaatgaatctaaaaaatatatttttccttataatagtg 31319648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 531 - 600
Target Start/End: Complemental strand, 32549929 - 32549860
Alignment:
Q  531 ttttagattcattgaacgattgatgtatgagatcattaatatagactatatacatcatttattcaatgaa 600  Q
    ||||||||||||| ||  | ||||||||| |||| ||||||||||| | |||||||||||||| ||||||    
T  32549929 ttttagattcattcaataaatgatgtatgtgatctttaatatagaccacatacatcatttattaaatgaa 32549860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 581 - 645
Target Start/End: Original strand, 34750410 - 34750475
Alignment:
Q  581 tacatcatttattcaatgaatttaaaaaataatttt-ttgcttataatagtggccggaggaagtac 645  Q
    ||||||| |||||||||||| ||||||| || |||| ||||||||||||||| ||||||| |||||    
T  34750410 tacatcacttattcaatgaacttaaaaagtagtttttttgcttataatagtgaccggagggagtac 34750475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 569 - 630
Target Start/End: Original strand, 38940289 - 38940350
Alignment:
Q  569 atatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagt 630  Q
    |||||||||| |||||||||||||| |||||||||||||| | | |||||  ||||||||||    
T  38940289 atatagactacatacatcatttattaaatgaatttaaaaagtgaatttttaattataatagt 38940350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 566 - 639
Target Start/End: Complemental strand, 43103145 - 43103072
Alignment:
Q  566 ttaatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggagg 639  Q
    ||||||||| ||  |||||||||||| | |||||||||||||  | | |||||||||||||||||| |||||||    
T  43103145 ttaatatagtctgcatacatcatttaataaatgaatttaaaatgttaatttttgcttataatagtgaccggagg 43103072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 575 - 639
Target Start/End: Original strand, 5950270 - 5950334
Alignment:
Q  575 actatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggagg 639  Q
    ||||||||||||||||| | ||||||| |||||  | | |||||||||||||||||| |||||||    
T  5950270 actatatacatcatttaatgaatgaatctaaaatgttagtttttgcttataatagtgaccggagg 5950334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 567 - 639
Target Start/End: Original strand, 8571450 - 8571522
Alignment:
Q  567 taatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggagg 639  Q
    ||||| || ||| |||||||||||| | ||||||||||||||  || |||||||||||| ||||| |||||||    
T  8571450 taataaagtctacatacatcatttaatgaatgaatttaaaaatcaaatttttgcttatattagtgaccggagg 8571522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 572 - 639
Target Start/End: Complemental strand, 15051150 - 15051083
Alignment:
Q  572 tagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggagg 639  Q
    ||||| |||||||||||||||| |||| || ||||| |||| |||||||||||| | ||| |||||||    
T  15051150 tagacaatatacatcatttattgaatgtatctaaaacataaatttttgcttatatttgtgaccggagg 15051083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 580 - 631
Target Start/End: Complemental strand, 20559657 - 20559606
Alignment:
Q  580 atacatcatttattcaatgaatttaaaaaataattttttgcttataatagtg 631  Q
    |||||||| |||||||||||||||||||| | ||| |||| |||||||||||    
T  20559657 atacatcagttattcaatgaatttaaaaagtgattatttgtttataatagtg 20559606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 505 - 640
Target Start/End: Complemental strand, 21387710 - 21387575
Alignment:
Q  505 gtcactattataattaaaaacttactttttagattcattgaacgattgatgtatgagatcattaatatagactatatacatcatttattcaatgaattta 604  Q
    |||| ||||||||  ||||  |||||||||||||||||| ||  | ||||||||| | |   ||||| |||||| |||||||||| ||| ||||||| ||    
T  21387710 gtcaatattataagcaaaattttactttttagattcatttaataaatgatgtatgtggtatataataaagactacatacatcattaattgaatgaatcta 21387611  T
Q  605 aaaaataattttttgcttataatagtggccggagga 640  Q
     |||||   |||||||||||| ||||| || |||||    
T  21387610 gaaaatggatttttgcttatattagtgaccagagga 21387575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 504 - 631
Target Start/End: Original strand, 37491278 - 37491405
Alignment:
Q  504 ggtcactattataattaaaaacttactttttagattcattgaacgattgatgtatgagatcattaatatagactatatacatcatttattcaatgaattt 603  Q
    ||||||||||||||  ||||| |||||||||||||| ||| ||  | |||||||||   ||  ||  |  ||| |||||||||||||||| ||||||| |    
T  37491278 ggtcactattataagcaaaaatttactttttagatttattaaataaatgatgtatgtagtctatataagtgaccatatacatcatttattaaatgaatct 37491377  T
Q  604 aaaaaataattttttgcttataatagtg 631  Q
    ||||| |||  ||||| |||||||||||    
T  37491378 aaaaagtaaacttttgattataatagtg 37491405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 580 - 631
Target Start/End: Complemental strand, 47708460 - 47708409
Alignment:
Q  580 atacatcatttattcaatgaatttaaaaaataattttttgcttataatagtg 631  Q
    |||||||| | |||||||||| ||||||| || |||||||||||||||||||    
T  47708460 atacatcactcattcaatgaacttaaaaagtagttttttgcttataatagtg 47708409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 504 - 546
Target Start/End: Complemental strand, 2456716 - 2456674
Alignment:
Q  504 ggtcactattataattaaaaacttactttttagattcattgaa 546  Q
    |||||||||||||| ||||||  ||||||||||||||||||||    
T  2456716 ggtcactattataagtaaaaaactactttttagattcattgaa 2456674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 569 - 631
Target Start/End: Original strand, 11602837 - 11602899
Alignment:
Q  569 atatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtg 631  Q
    |||||||||| |||||||||||||| ||||||| |||||| | |  ||||| |||||||||||    
T  11602837 atatagactacatacatcatttattgaatgaatctaaaaagtgaacttttgtttataatagtg 11602899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 581 - 639
Target Start/End: Complemental strand, 21886525 - 21886467
Alignment:
Q  581 tacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggagg 639  Q
    ||||||||| ||| ||||||| ||||| |||| ||||||||||||||| || |||||||    
T  21886525 tacatcattaattgaatgaatctaaaatataaatttttgcttataataatgaccggagg 21886467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 571 - 645
Target Start/End: Original strand, 28285461 - 28285535
Alignment:
Q  571 atagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggaggaagtac 645  Q
    |||| ||| |||||||||||| | ||||||||||||||  || |||||||||||| || || |||||||| ||||    
T  28285461 ataggctacatacatcatttaatgaatgaatttaaaaatcaaatttttgcttatattaatgaccggaggatgtac 28285535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 567 - 645
Target Start/End: Complemental strand, 46648417 - 46648339
Alignment:
Q  567 taatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggaggaagtac 645  Q
    ||||| |||||| |||||||||||| | ||||||| ||||||  || |||||||||||| ||||| | |||||| ||||    
T  46648417 taataaagactacatacatcatttaatgaatgaatctaaaaatcaaatttttgcttatattagtgacaggaggatgtac 46648339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 580 - 638
Target Start/End: Complemental strand, 47535029 - 47534971
Alignment:
Q  580 atacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggag 638  Q
    |||||||| | ||| |||||| ||||||| || ||||||||||||||||||| ||||||    
T  47535029 atacatcactcatttaatgaacttaaaaagtagttttttgcttataatagtgaccggag 47534971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 570 - 639
Target Start/End: Complemental strand, 2360518 - 2360449
Alignment:
Q  570 tatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggagg 639  Q
    ||||||||| |||| ||||||| | ||||||| ||||||  || |||||||||||| ||||| |||||||    
T  2360518 tatagactacatacgtcatttaatgaatgaatctaaaaatcaaatttttgcttatattagtgaccggagg 2360449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 578 - 631
Target Start/End: Complemental strand, 3106007 - 3105954
Alignment:
Q  578 atatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtg 631  Q
    ||||||| || | ||||||| ||  |||||||||||||||||||||||||||||    
T  3106007 atatacaacactcattcaataaacctaaaaaataattttttgcttataatagtg 3105954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 563 - 608
Target Start/End: Original strand, 27115299 - 27115344
Alignment:
Q  563 tcattaatatagactatatacatcatttattcaatgaatttaaaaa 608  Q
    |||||||||||||| | |||||| ||||||||||||||| ||||||    
T  27115299 tcattaatatagaccacatacataatttattcaatgaatctaaaaa 27115344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 580 - 637
Target Start/End: Original strand, 36502327 - 36502384
Alignment:
Q  580 atacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccgga 637  Q
    |||||||||||||||| | ||| |||||||||  |||||| ||||||||||| |||||    
T  36502327 atacatcatttattcagtaaatctaaaaaatatatttttgtttataatagtgaccgga 36502384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 500 - 639
Target Start/End: Complemental strand, 38238923 - 38238783
Alignment:
Q  500 ctccggtcactattataattaaaaacttactttttagattcattgaacgattgatgtatgagatcat-taatatagactatatacatcatttattcaatg 598  Q
    |||||||||||| |||||  |||||  |||||||||||| |||| ||  | ||||||||| || ||| ||||| |||| | |||||||||| ||| ||||    
T  38238923 ctccggtcactaatataagcaaaaatctactttttagatacattcaattaatgatgtatgtga-catataataaagaccacatacatcattaattgaatg 38238825  T
Q  599 aatttaaaaaat-aattttttgcttataatagtggccggagg 639  Q
     || |||||| | || |||||||||||| ||||| |||||||    
T  38238824 tatctaaaaagtgaaatttttgcttatattagtgaccggagg 38238783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 528 - 601
Target Start/End: Complemental strand, 39153402 - 39153329
Alignment:
Q  528 actttttagattcattgaacgattgatgtatgagatcattaatatagactatatacatcatttattcaatgaat 601  Q
    ||||||||| ||||||||   ||||||||||  | ||  |||||||||||| ||||||||||||| ||||||||    
T  39153402 actttttagcttcattgagtaattgatgtatttggtctataatatagactaaatacatcatttatgcaatgaat 39153329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 53; Significance: 5e-21; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 500 - 636
Target Start/End: Original strand, 13654510 - 13654645
Alignment:
Q  500 ctccggtcactattataattaaaaacttactttttagattcattgaacgattgatgtatgagatcattaatatagactatatacatcatttattcaatga 599  Q
    |||||||||||||||||| |||| | | ||||||||| |||||| ||  | ||||||||| | ||  || ||||||||| |||||||||||||| |||||    
T  13654510 ctccggtcactattataagtaaatattgactttttaggttcattcaataaatgatgtatgtggtccata-tatagactaaatacatcatttattgaatga 13654608  T
Q  600 atttaaaaaataattttttgcttataatagtggccgg 636  Q
    ||||||||| | | |||||||||||||||||| ||||    
T  13654609 atttaaaaagtgaatttttgcttataatagtgaccgg 13654645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 506 - 644
Target Start/End: Original strand, 1098635 - 1098772
Alignment:
Q  506 tcactattataattaaaaacttactttttagattcattgaacgattgatgtatgagatcattaatatagactatatacatcatttattcaatgaatttaa 605  Q
    |||||||||||| |||||  | |||||||||||||||| ||  | ||||||||| | ||  || ||||||||| |||||| ||||||| ||||||| |||    
T  1098635 tcactattataagtaaaagttgactttttagattcattcaataaatgatgtatgtggtctata-tatagactacatacattatttattaaatgaatctaa 1098733  T
Q  606 aaaataattttttgcttataatagtggccggaggaagta 644  Q
    |||||||  ||||||||||||||||| ||||||| ||||    
T  1098734 aaaataaacttttgcttataatagtgaccggagggagta 1098772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 506 - 631
Target Start/End: Complemental strand, 3100538 - 3100413
Alignment:
Q  506 tcactattataattaaaaacttactttttagattcattgaacgattgatgtatgagatcattaatatagactatatacatcatttattcaatgaatttaa 605  Q
    |||||||||||| | |||| |||| ||||||||||||| ||  | ||||||||  |||| ||| ||||||||| |||||||||||||| ||||||| |||    
T  3100538 tcactattataagtgaaaatttacattttagattcattcaattaatgatgtatatgatctttattatagactacatacatcatttattgaatgaatctaa 3100439  T
Q  606 aaaataattttttgcttataatagtg 631  Q
    ||  | | ||||||||||||||||||    
T  3100438 aatgttaatttttgcttataatagtg 3100413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 503 - 636
Target Start/End: Original strand, 892555 - 892688
Alignment:
Q  503 cggtcactattataattaaaaacttactttttagattcattgaacgattgatgtatgagatcattaatatagactatatacatcatttattcaatgaatt 602  Q
    |||| ||||||||||  ||||| | |||||||||||||||||||  ||| ||||||  | ||  || |||| |||| |||||||  ||||||||||||||    
T  892555 cggttactattataagcaaaaattcactttttagattcattgaataattaatgtatttgttctatactatatactagatacatccgttattcaatgaatt 892654  T
Q  603 taaaaaataattttttgcttataatagtggccgg 636  Q
    | |||| ||| |||||||||||||| ||| ||||    
T  892655 ttaaaagtaaatttttgcttataattgtgaccgg 892688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 566 - 618
Target Start/End: Original strand, 27094313 - 27094365
Alignment:
Q  566 ttaatatagactatatacatcatttattcaatgaatttaaaaaataatttttt 618  Q
    ||||||||||| |||||||| |||||||||||||||||||||||||| |||||    
T  27094313 ttaatatagaccatatacataatttattcaatgaatttaaaaaataaattttt 27094365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 568 - 630
Target Start/End: Original strand, 238795 - 238857
Alignment:
Q  568 aatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagt 630  Q
    |||||||| || |||||||||||||||||||||| |||||||| | ||||||| |||||||||    
T  238795 aatatagattacatacatcatttattcaatgaatataaaaaatgaatttttgcctataatagt 238857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 570 - 631
Target Start/End: Complemental strand, 14107598 - 14107537
Alignment:
Q  570 tatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtg 631  Q
    ||||||||| ||| |||||||||||||||||||| |||||||   |||||||||||||||||    
T  14107598 tatagactaaataaatcatttattcaatgaatttgaaaaatagaattttgcttataatagtg 14107537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 569 - 630
Target Start/End: Original strand, 15311928 - 15311989
Alignment:
Q  569 atatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagt 630  Q
    ||||||| ||||||||||||||||| ||||||| |||||||||  ||||| |||||||||||    
T  15311928 atatagattatatacatcatttattaaatgaatctaaaaaatagatttttccttataatagt 15311989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 500 - 637
Target Start/End: Complemental strand, 42910851 - 42910714
Alignment:
Q  500 ctccggtcactattataattaaaaacttactttttagattcattgaacgattgatgtatgagatcattaatatagactatatacatcatttattcaatga 599  Q
    |||||||||||||||||| |||||   |||||||||| || |||||| || ||||| ||| |  |||| |||||||| | || ||||||||||||||| |    
T  42910851 ctccggtcactattataagtaaaatactactttttaggtttattgaatgagtgatgaatgtggccatttatatagaccacatgcatcatttattcaataa 42910752  T
Q  600 atttaaaaaataattttttgcttataatagtggccgga 637  Q
       |||||| || ||||||  ||||||||||| |||||    
T  42910751 tcctaaaaagtagttttttatttataatagtgaccgga 42910714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 504 - 644
Target Start/End: Original strand, 13391536 - 13391676
Alignment:
Q  504 ggtcactattataattaaaaacttactttttagattcattgaacgattgatgtatgagatcattaatatagactatatacatcatttattcaatgaattt 603  Q
    |||||||||||||| |||||    |||||||||||||||| ||  | ||||||||  | ||| |||||||||||| |||||| ||||||| ||||||  |    
T  13391536 ggtcactattataagtaaaagtcaactttttagattcattcaataaatgatgtatttggtcaataatatagactaaatacataatttattgaatgaacct 13391635  T
Q  604 aaaaaataattttttgcttataatagtggccggaggaagta 644  Q
    ||||| |   ||||||||||||| |||| | ||||| ||||    
T  13391636 aaaaagttgatttttgcttataacagtgacaggagggagta 13391676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 562 - 644
Target Start/End: Original strand, 32911555 - 32911638
Alignment:
Q  562 atcattaatatagactatatacatcatttattcaatgaatttaaaaaata-attttttgcttataatagtggccggaggaagta 644  Q
    ||||||| ||||||||| |||||||||||| | ||||||  |||||| |  |||||||||||||||||||| || |||||||||    
T  32911555 atcattattatagactaaatacatcatttaatgaatgaacctaaaaagttgattttttgcttataatagtgaccagaggaagta 32911638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 500 - 631
Target Start/End: Original strand, 37944603 - 37944734
Alignment:
Q  500 ctccggtcactattataattaaaaacttactttttagattcattgaacgattgatgtatgagatcattaatatagactatatacatcatttattcaatga 599  Q
    |||||||||||| |||||  ||||| | ||||||||||| |||| ||  | ||||||||| |||| ||| ||||    | |||||||||| ||| ||||     
T  37944603 ctccggtcactaatataagcaaaaattcactttttagatacattcaattaatgatgtatgtgatctttattatatgtcacatacatcattaattgaatgt 37944702  T
Q  600 atttaaaaaataattttttgcttataatagtg 631  Q
    || |||||||||| |||||||||||| |||||    
T  37944703 atctaaaaaataaatttttgcttatattagtg 37944734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 569 - 644
Target Start/End: Complemental strand, 40100157 - 40100082
Alignment:
Q  569 atatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggaggaagta 644  Q
    |||||||| | | |||||||||||| |||||||||||||| | | ||||||||||||||||||  |||||| ||||    
T  40100157 atatagaccacacacatcatttattaaatgaatttaaaaagtcaatttttgcttataatagtgaacggagggagta 40100082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 569 - 631
Target Start/End: Complemental strand, 27895967 - 27895905
Alignment:
Q  569 atatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtg 631  Q
    |||||||||| |||||||||||||| ||||||| |||||||| |  ||||| |||||||||||    
T  27895967 atatagactacatacatcatttattaaatgaatctaaaaaatgaacttttgtttataatagtg 27895905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 503 - 629
Target Start/End: Original strand, 30371337 - 30371463
Alignment:
Q  503 cggtcactattataattaaaaacttactttttagattcattgaacgattgatgtatgagatcattaatatagactatatacatcatttattcaatgaatt 602  Q
    |||||| |||||||| |||||| | || ||||||||||||| |   | | ||||||| |||   ||||| |||| |||||||  ||| ||| |||||||     
T  30371337 cggtcattattataagtaaaaattaacattttagattcatttattaaataatgtatgtgatttataataaagaccatatacaatattaattaaatgaatc 30371436  T
Q  603 taaaaaataattttttgcttataatag 629  Q
    ||||| |||||||||||||||||||||    
T  30371437 taaaatataattttttgcttataatag 30371463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 578 - 639
Target Start/End: Complemental strand, 71320 - 71259
Alignment:
Q  578 atatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggagg 639  Q
    |||||||||||| ||| ||||||| ||||| |||  |||||||||||||||||| |||||||    
T  71320 atatacatcattaattgaatgaatctaaaatatagatttttgcttataatagtgaccggagg 71259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 570 - 639
Target Start/End: Complemental strand, 5504446 - 5504377
Alignment:
Q  570 tatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggagg 639  Q
    ||||||| | |||||||||||| | ||||||||||||| | ||  ||||||||||||||||| |||||||    
T  5504446 tatagaccaaatacatcatttaatgaatgaatttaaaatacaaaattttgcttataatagtgcccggagg 5504377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 567 - 636
Target Start/End: Original strand, 14772614 - 14772683
Alignment:
Q  567 taatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccgg 636  Q
    ||||| ||||||||||||||||| ||| ||| ||| ||||| ||||  ||||||||||||||||| ||||    
T  14772614 taataaagactatatacatcattaattgaattaatctaaaatataaagttttgcttataatagtgaccgg 14772683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 580 - 625
Target Start/End: Original strand, 30780151 - 30780196
Alignment:
Q  580 atacatcatttattcaatgaatttaaaaaataattttttgcttata 625  Q
    |||||||||||||| ||||||||||||| |||| ||||||||||||    
T  30780151 atacatcatttattgaatgaatttaaaacataaatttttgcttata 30780196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 500 - 648
Target Start/End: Complemental strand, 1098766 - 1098619
Alignment:
Q  500 ctccggtcactattataattaaaaacttactttttagattcattgaacgattgatgtatgagatcattaatatagactatatacatcatttattcaatga 599  Q
    ||||||||||||||||||  ||||  ||| |||||||||||||| ||  | | |||||||   ||  || ||||||| | |||||||||||||| |||||    
T  1098766 ctccggtcactattataagcaaaagtttattttttagattcatttaataaataatgtatgtagtctata-tatagaccacatacatcatttattgaatga 1098668  T
Q  600 atttaaaaaataattttttgcttataatagtggccggaggaagtactat 648  Q
    || |||||| | |  |||| ||||||||||||   ||||||||||||||    
T  1098667 atctaaaaagtcaacttttacttataatagtgattggaggaagtactat 1098619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 528 - 644
Target Start/End: Complemental strand, 7613469 - 7613353
Alignment:
Q  528 actttttagattcattgaacgattgatgtatgagatcattaatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataat 627  Q
    |||||||||||||||| ||  | ||||||||  | | | |||||||||||| ||||  |||||| | |||||| ||||||| |   ||||||||||||||    
T  7613469 actttttagattcatttaataaatgatgtatttggttaataatatagactaaatactgcatttaatgaatgaacttaaaaagttgatttttgcttataat 7613370  T
Q  628 agtggccggaggaagta 644  Q
    |||| |||||| |||||    
T  7613369 agtgaccggagaaagta 7613353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 569 - 625
Target Start/End: Original strand, 17768077 - 17768133
Alignment:
Q  569 atatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttata 625  Q
    |||||||| | |||||| || |||||||||||  |||||||||||||||||||||||    
T  17768077 atatagaccaaatacattatgtattcaatgaacctaaaaaataattttttgcttata 17768133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 531 - 639
Target Start/End: Complemental strand, 25408651 - 25408543
Alignment:
Q  531 ttttagattcattgaacgattgatgtatgagatcattaatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagt 630  Q
    ||||||||||||| ||  | ||||||||| | || ||| | ||||| | |||||||||||||| ||||||| ||||| || | |||||||||||| | ||    
T  25408651 ttttagattcattcaataaatgatgtatgtggtctttattgtagacaacatacatcatttattgaatgaatctaaaatatgaatttttgcttatatttgt 25408552  T
Q  631 ggccggagg 639  Q
    | |||||||    
T  25408551 gaccggagg 25408543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 580 - 644
Target Start/End: Complemental strand, 28499841 - 28499777
Alignment:
Q  580 atacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggaggaagta 644  Q
    |||||| | ||||||||||||| |||||||| |||||||||||||||  ||| ||||||| ||||    
T  28499841 atacattagttattcaatgaatctaaaaaattattttttgcttataaatgtgaccggagggagta 28499777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 580 - 639
Target Start/End: Original strand, 13356218 - 13356277
Alignment:
Q  580 atacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggagg 639  Q
    |||||||||||||| |||||| ||||||| ||  ||||||||||||||| || |||||||    
T  13356218 atacatcatttattgaatgaacttaaaaagtagatttttgcttataataatgaccggagg 13356277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 580 - 639
Target Start/End: Original strand, 25792927 - 25792986
Alignment:
Q  580 atacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggagg 639  Q
    |||||||||||| | ||||||  |||||| ||| |||||||||||||||||| |||||||    
T  25792927 atacatcatttaatgaatgaacctaaaaagtaaatttttgcttataatagtgaccggagg 25792986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 500 - 639
Target Start/End: Original strand, 26300112 - 26300251
Alignment:
Q  500 ctccggtcactattataattaaaaacttactttttagattcattgaacgattgatgtatgagatcattaatatagactatatacatcatttattcaatga 599  Q
    |||||||||||| |||||  ||||| ||||||||||||| |||| ||  | ||||||||| | || ||| ||||    |||||||||||| ||| ||||     
T  26300112 ctccggtcactaatataagcaaaaatttactttttagatacattcaattaatgatgtatgtggtctttattatatgtcatatacatcattaattgaatgt 26300211  T
Q  600 atttaaaaaataattttttgcttataatagtggccggagg 639  Q
    || |||||| |||  |||| |||||| ||||| |||||||    
T  26300212 atctaaaaagtaaaattttacttatattagtgaccggagg 26300251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 568 - 630
Target Start/End: Complemental strand, 33867996 - 33867933
Alignment:
Q  568 aatatagactatatacatcatttattcaatgaatttaaaa-aataattttttgcttataatagt 630  Q
    |||| |||||||||| |||||| ||| ||||||| ||||| ||| |||||||||||||||||||    
T  33867996 aataaagactatatatatcattaattgaatgaatataaaataatgattttttgcttataatagt 33867933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 567 - 625
Target Start/End: Complemental strand, 5004036 - 5003978
Alignment:
Q  567 taatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttata 625  Q
    |||||||||||| |||||||| |||||||||||| || |||||  | ||||||||||||    
T  5004036 taatatagactaaatacatcagttattcaatgaaattgaaaaaacaatttttgcttata 5003978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 570 - 644
Target Start/End: Complemental strand, 5240295 - 5240221
Alignment:
Q  570 tatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggaggaagta 644  Q
    |||| |||| |||||| | |||||||||| || |||||||| |  ||||||||||||||||| ||||||| ||||    
T  5240295 tatatactagatacattaattattcaatgtatctaaaaaatcaaattttgcttataatagtgaccggagggagta 5240221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 579 - 625
Target Start/End: Original strand, 12646584 - 12646630
Alignment:
Q  579 tatacatcatttattcaatgaatttaaaaaataattttttgcttata 625  Q
    ||||||||||||||| ||||||| |||||| ||| ||||||||||||    
T  12646584 tatacatcatttattaaatgaatctaaaaagtaaatttttgcttata 12646630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 583 - 637
Target Start/End: Complemental strand, 25358114 - 25358060
Alignment:
Q  583 catcatttattcaatgaatttaaaaaataattttttgcttataatagtggccgga 637  Q
    ||||||||||| ||||||| | |||||||| ||||| |||||||||||| |||||    
T  25358114 catcatttattgaatgaatcttaaaaataaatttttacttataatagtgaccgga 25358060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 577 - 631
Target Start/End: Original strand, 32398081 - 32398135
Alignment:
Q  577 tatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtg 631  Q
    ||||||||||||| ||| ||||||||||||| |||  |||||| |||||||||||    
T  32398081 tatatacatcattaattgaatgaatttaaaatatagatttttgtttataatagtg 32398135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 580 - 630
Target Start/End: Complemental strand, 36897801 - 36897751
Alignment:
Q  580 atacatcatttattcaatgaatttaaaaaataattttttgcttataatagt 630  Q
    |||||||||||||| |||||||||||||  ||| ||||| |||||||||||    
T  36897801 atacatcatttatttaatgaatttaaaatgtaaatttttacttataatagt 36897751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 575 - 644
Target Start/End: Original strand, 40100162 - 40100232
Alignment:
Q  575 actatatacatcatttattcaatgaatttaaaaaa-taattttttgcttataatagtggccggaggaagta 644  Q
    |||| |||||||||||| | ||||||| ||||||| | | |||||||||||||||||| ||||||| ||||    
T  40100162 actacatacatcatttactgaatgaatctaaaaaaatgaatttttgcttataatagtgaccggagggagta 40100232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 570 - 639
Target Start/End: Complemental strand, 1996916 - 1996847
Alignment:
Q  570 tatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggagg 639  Q
    ||||||||| |||| ||||||| | ||||||| ||||||  || |||||||||||| ||||| |||||||    
T  1996916 tatagactacatacgtcatttaatgaatgaatctaaaaatcaaatttttgcttatattagtgaccggagg 1996847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 580 - 625
Target Start/End: Original strand, 25408624 - 25408669
Alignment:
Q  580 atacatcatttattcaatgaatttaaaaaataattttttgcttata 625  Q
    |||||||||||||| ||||||| ||||| |||| ||||||||||||    
T  25408624 atacatcatttattgaatgaatctaaaacataaatttttgcttata 25408669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 570 - 639
Target Start/End: Complemental strand, 27314544 - 27314475
Alignment:
Q  570 tatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggagg 639  Q
    ||||||||| |||| ||||||| | ||||||| ||||||  || |||||||||||| ||||| |||||||    
T  27314544 tatagactacatacgtcatttaatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagg 27314475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 567 - 608
Target Start/End: Original strand, 39785129 - 39785170
Alignment:
Q  567 taatatagactatatacatcatttattcaatgaatttaaaaa 608  Q
    |||||||||| | |||||||||||||| ||||||||||||||    
T  39785129 taatatagaccacatacatcatttattgaatgaatttaaaaa 39785170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 500 - 637
Target Start/End: Original strand, 42364221 - 42364358
Alignment:
Q  500 ctccggtcactattataattaaaaacttactttttagattcattgaacgattgatgtatgagatcattaatatagactatatacatcatttattcaatga 599  Q
    ||||||||||| ||||||  ||||| |||||||||| || |||||||  ||| |||||||   || ||| |||| |||| ||||   | ||||||||||     
T  42364221 ctccggtcactgttataaacaaaaatttactttttaaatacattgaataattaatgtatgtagtctttattataaactagataccctaattattcaatgt 42364320  T
Q  600 atttaaaaaataattttttgcttataatagtggccgga 637  Q
    || |||||| | |  ||||||||||||||||| |||||    
T  42364321 atctaaaaagtgaagttttgcttataatagtgaccgga 42364358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 53; Significance: 5e-21; HSPs: 63)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 530 - 631
Target Start/End: Original strand, 31089917 - 31090020
Alignment:
Q  530 tttttagattcattgaacgattgatgtatgagatcattaatatagactatatacatcatttattcaatgaatttaaaaaataat--tttttgcttataat 627  Q
    ||||||| ||||||||| || ||||||||| || ||||||||||||| | |||||||||||||||||||||| |||||| || |  ||||||||||||||    
T  31089917 tttttaggttcattgaatgagtgatgtatgtgaccattaatatagaccacatacatcatttattcaatgaatctaaaaagtagttctttttgcttataat 31090016  T
Q  628 agtg 631  Q
    ||||    
T  31090017 agtg 31090020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 501 - 640
Target Start/End: Original strand, 29006837 - 29006976
Alignment:
Q  501 tccggtcactattataattaaaaacttactttttagattcattgaacgattgatgtatgagat-cattaatatagactatatacatcatttattcaatga 599  Q
    |||||||||||||||||  |||||  || |||||||||||||| ||  | ||||||||| ||| |||||| |||||| | |||||||||||||| |||||    
T  29006837 tccggtcactattataagcaaaaatctattttttagattcattcaataaatgatgtatgtgatccattaa-atagaccacatacatcatttattgaatga 29006935  T
Q  600 atttaaaaaataattttttgcttataatagtggccggagga 640  Q
    ||||||||| |    ||||||||||||||||| ||||||||    
T  29006936 atttaaaaagtggaattttgcttataatagtgaccggagga 29006976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 528 - 644
Target Start/End: Original strand, 22235289 - 22235405
Alignment:
Q  528 actttttagattcattgaacgattgatgtatgagatcattaatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataat 627  Q
    ||||||||| ||| |||||  |||||| |||  |||| |||||||| || | |||||||| ||||||||||||| |||||  | ||||||||||||||||    
T  22235289 actttttaggttctttgaataattgatatatttgatctttaatataaaccagatacatcagttattcaatgaatctaaaatgtgattttttgcttataat 22235388  T
Q  628 agtggccggaggaagta 644  Q
    |||| ||||||| ||||    
T  22235389 agtgaccggagggagta 22235405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 577 - 631
Target Start/End: Original strand, 21208652 - 21208706
Alignment:
Q  577 tatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtg 631  Q
    ||||||||||| ||||||||||||  |||||||||||||||||||||||||||||    
T  21208652 tatatacatcacttattcaatgaacctaaaaaataattttttgcttataatagtg 21208706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 504 - 618
Target Start/End: Complemental strand, 49229301 - 49229187
Alignment:
Q  504 ggtcactattataattaaaaacttactttttagattcattgaacgattgatgtatgagatcattaatatagactatatacatcatttattcaatgaattt 603  Q
    |||||||| ||||| |||||| | | ||||||| || |||||| || |||| ||||  | |||||||||| || |  |||||||||||||||||||||||    
T  49229301 ggtcactactataagtaaaaaataattttttaggtttattgaatgaatgatatatgtaaacattaatatataccacgtacatcatttattcaatgaattt 49229202  T
Q  604 aaaaaataatttttt 618  Q
    |||||||| ||||||    
T  49229201 aaaaaatattttttt 49229187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 500 - 639
Target Start/End: Complemental strand, 54164952 - 54164813
Alignment:
Q  500 ctccggtcactattataattaaaaacttactttttagattcattgaacgattgatgtatgagat-cattaatatagactatatacatcatttattcaatg 598  Q
    ||||||||||||||||||  |||||  || |||||||||||||| ||  | ||||||||| | | |||||| |||||| | |||||||||||||| ||||    
T  54164952 ctccggtcactattataagcaaaaatctattttttagattcattcaataaatgatgtatgtggtccattaa-atagaccacatacatcatttattgaatg 54164854  T
Q  599 aatttaaaaaataattttttgcttataatagtggccggagg 639  Q
    ||| |||||| |    ||||||||||||||||| |||||||    
T  54164853 aatctaaaaagtggaattttgcttataatagtgaccggagg 54164813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 500 - 639
Target Start/End: Original strand, 54164814 - 54164953
Alignment:
Q  500 ctccggtcactattataattaaaaacttactttttagattcattgaacgattgatgtatgagatc-attaatatagactatatacatcatttattcaatg 598  Q
    ||||||||||||||||||  ||||    |||||||||||||||| ||  | ||||||||| | || ||| | || ||| | |||||||||||||| ||||    
T  54164814 ctccggtcactattataagcaaaattccactttttagattcattcaataaatgatgtatgtggtctattta-atggaccacatacatcatttattgaatg 54164912  T
Q  599 aatttaaaaaataattttttgcttataatagtggccggagg 639  Q
    ||| |||||||||  |||||||||||||||||| |||||||    
T  54164913 aatctaaaaaatagatttttgcttataatagtgaccggagg 54164953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 572 - 631
Target Start/End: Complemental strand, 3094334 - 3094275
Alignment:
Q  572 tagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtg 631  Q
    ||||| |||||||||||||||| ||||||| |||||||||| |||||| |||||||||||    
T  3094334 tagaccatatacatcatttattgaatgaatataaaaaataaatttttgtttataatagtg 3094275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 527 - 637
Target Start/End: Original strand, 6462740 - 6462850
Alignment:
Q  527 tactttttagattcattgaacgattgatgtatgagatc-attaatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttata 625  Q
    |||||||||| |||||| ||  | ||||||||| |||| ||||| |||||  | |||||||||||||| ||||||| ||||||||||  ||||| |||||    
T  6462740 tactttttaggttcattcaataaatgatgtatgtgatccattaa-atagatcacatacatcatttattgaatgaatctaaaaaataaaattttgtttata 6462838  T
Q  626 atagtggccgga 637  Q
    ||||||||||||    
T  6462839 atagtggccgga 6462850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 569 - 644
Target Start/End: Original strand, 11796654 - 11796729
Alignment:
Q  569 atatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggaggaagta 644  Q
    ||||||| || |||||||||||||| ||| ||| |||||| | | |||||||||||||||||||||| ||||||||    
T  11796654 atatagattacatacatcatttattgaataaatctaaaaagtgaatttttgcttataatagtggccgaaggaagta 11796729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 500 - 546
Target Start/End: Complemental strand, 56257474 - 56257428
Alignment:
Q  500 ctccggtcactattataattaaaaacttactttttagattcattgaa 546  Q
    |||||||||||||||||| |||||| |||||||||||||||||||||    
T  56257474 ctccggtcactattataagtaaaaagttactttttagattcattgaa 56257428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 569 - 630
Target Start/End: Original strand, 2254023 - 2254084
Alignment:
Q  569 atatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagt 630  Q
    |||||||||| ||| |||||||||| ||||||||||||||||||  ||||| ||||||||||    
T  2254023 atatagactacatatatcatttattgaatgaatttaaaaaataaacttttgtttataatagt 2254084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 501 - 630
Target Start/End: Complemental strand, 5816677 - 5816548
Alignment:
Q  501 tccggtcactattataattaaaaacttactttttagattcattgaacgattgatgtatgagatcattaatatagactatatacatcatttattcaatgaa 600  Q
    ||||||||||||||||| |||||  || | ||||||||||||| |   | |||| |||| ||||  ||||| |||  |||||||||||| ||| ||||||    
T  5816677 tccggtcactattataaataaaactttgcattttagattcattcattaaatgatatatgtgatctataataaagatcatatacatcattaattaaatgaa 5816578  T
Q  601 tttaaaaaataattttttgcttataatagt 630  Q
    ||||||| | ||  ||||||||||||||||    
T  5816577 tttaaaatacaaagttttgcttataatagt 5816548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 580 - 637
Target Start/End: Complemental strand, 29006894 - 29006837
Alignment:
Q  580 atacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccgga 637  Q
    |||||||||||||| ||||||| |||||||||  |||||||||||||||||| |||||    
T  29006894 atacatcatttattgaatgaatctaaaaaatagatttttgcttataatagtgaccgga 29006837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 578 - 631
Target Start/End: Complemental strand, 38539539 - 38539486
Alignment:
Q  578 atatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtg 631  Q
    |||||||||||||||| ||| ||||||||| |||| ||||||||||||||||||    
T  38539539 atatacatcatttattgaataaatttaaaatataaatttttgcttataatagtg 38539486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 567 - 628
Target Start/End: Original strand, 38949750 - 38949811
Alignment:
Q  567 taatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataata 628  Q
    |||||||||||| |||||||||||||| ||| ||||||||||||| |||||| | |||||||    
T  38949750 taatatagactacatacatcatttattgaataaatttaaaaaatactttttttcatataata 38949811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 500 - 639
Target Start/End: Complemental strand, 19934777 - 19934638
Alignment:
Q  500 ctccggtcactattataattaaaaacttactttttagattcattgaacgattgatgtatgagatc-attaatatagactatatacatcatttattcaatg 598  Q
    ||||| ||||||||||||  |||||  || |||||||||||||| ||  | ||||||||| | || ||||| |||||| | |||||||||||||| ||||    
T  19934777 ctccgatcactattataagcaaaaatctattttttagattcattcaataaatgatgtatgtggtccattaa-atagaccacatacatcatttattgaatg 19934679  T
Q  599 aatttaaaaaataattttttgcttataatagtggccggagg 639  Q
    ||| |||||| |    ||||||||||||||||| |||||||    
T  19934678 aatctaaaaagtggaattttgcttataatagtgaccggagg 19934638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 500 - 631
Target Start/End: Original strand, 19934639 - 19934770
Alignment:
Q  500 ctccggtcactattataattaaaaacttactttttagattcattgaacgattgatgtatgagatc-attaatatagactatatacatcatttattcaatg 598  Q
    ||||||||||||||||||  ||||    |||||||||||||||| ||  | ||||||||| | || ||| | || ||| | |||||||||||||| ||||    
T  19934639 ctccggtcactattataagcaaaattccactttttagattcattcaataaatgatgtatgtggtctattta-atggaccacatacatcatttattgaatg 19934737  T
Q  599 aatttaaaaaataattttttgcttataatagtg 631  Q
    ||| |||||||||  ||||||||||||||||||    
T  19934738 aatctaaaaaatagatttttgcttataatagtg 19934770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 580 - 640
Target Start/End: Complemental strand, 38382035 - 38381975
Alignment:
Q  580 atacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggagga 640  Q
    |||||||||||| ||||||||| |||||  ||| |||||||||||||||||| ||||||||    
T  38382035 atacatcatttaatcaatgaatctaaaatgtaaatttttgcttataatagtgaccggagga 38381975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 580 - 640
Target Start/End: Original strand, 48402492 - 48402552
Alignment:
Q  580 atacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggagga 640  Q
    |||||||||||| | ||||||| ||||| |||  |||||||||||||||||||||||||||    
T  48402492 atacatcatttaatgaatgaatctaaaatatagatttttgcttataatagtggccggagga 48402552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 502 - 638
Target Start/End: Complemental strand, 54106612 - 54106476
Alignment:
Q  502 ccggtcactattataattaaaaacttactttttagattcattgaacgattgatgtatgagatcattaatatagactatatacatcatttattcaatgaat 601  Q
    |||||||| | |||||  ||||| |||  ||||||||||||| ||  | ||||||||| |||| ||| | ||||| | |||||||||||||| |||||||    
T  54106612 ccggtcacaaatataagcaaaaatttatgttttagattcattcaataaatgatgtatgtgatctttattgtagacaacatacatcatttattgaatgaat 54106513  T
Q  602 ttaaaaaataattttttgcttataatagtggccggag 638  Q
     ||||| || | |||||||||||| | ||| ||||||    
T  54106512 ctaaaatatgaatttttgcttatatttgtgaccggag 54106476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 500 - 631
Target Start/End: Complemental strand, 5535852 - 5535722
Alignment:
Q  500 ctccggtcactattataattaaaaacttactttttagattcattgaacgattgatgtatgagatcattaatatagactatatacatcatttattcaatga 599  Q
    ||||| ||||||||||||  ||||| | |||| |||| |||||| ||  | ||||||||| | ||  || |||| |||| |||||||||||||| |||||    
T  5535852 ctccgatcactattataagcaaaaattgacttgttaggttcattcaataactgatgtatgtggtctata-tataaactacatacatcatttattgaatga 5535754  T
Q  600 atttaaaaaataattttttgcttataatagtg 631  Q
    || |||||||| | |||||||||||| |||||    
T  5535753 atctaaaaaatgagtttttgcttatactagtg 5535722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 235 - 294
Target Start/End: Complemental strand, 20122217 - 20122158
Alignment:
Q  235 acttactgcatatatctgaaatatgtgatgtccaaaaacagatatcttacgaagatactg 294  Q
    ||||||||| || ||  |||||||| ||||||||| ||||||||||||||||||||||||    
T  20122217 acttactgcgtagattagaaatatgcgatgtccaagaacagatatcttacgaagatactg 20122158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 580 - 631
Target Start/End: Original strand, 26636521 - 26636572
Alignment:
Q  580 atacatcatttattcaatgaatttaaaaaataattttttgcttataatagtg 631  Q
    |||||||||||||| ||||||| |||||||||| ||||| ||||||||||||    
T  26636521 atacatcatttattgaatgaatctaaaaaataaatttttacttataatagtg 26636572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 580 - 631
Target Start/End: Complemental strand, 26863157 - 26863106
Alignment:
Q  580 atacatcatttattcaatgaatttaaaaaataattttttgcttataatagtg 631  Q
    |||||||| ||||||||||||||||||| |||| |||||| |||||||||||    
T  26863157 atacatcaattattcaatgaatttaaaatataaatttttgtttataatagtg 26863106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 500 - 631
Target Start/End: Original strand, 38381977 - 38382108
Alignment:
Q  500 ctccggtcactattataattaaaaacttactttttagattcattgaacgattgatgtatgagatcattaatatagactatatacatcatttattcaatga 599  Q
    ||||||||||||||||||  ||||| |||| |||||||||||||||   | ||||||||| | |   ||||| |||||| |||||||||||| | ||||     
T  38381977 ctccggtcactattataagcaaaaatttacattttagattcattgattaaatgatgtatgtggtttataatacagactacatacatcatttaatgaatgt 38382076  T
Q  600 atttaaaaaataattttttgcttataatagtg 631  Q
    || |||||  |   ||||||||||||||||||    
T  38382077 atctaaaacgttgatttttgcttataatagtg 38382108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 505 - 631
Target Start/End: Original strand, 24798133 - 24798259
Alignment:
Q  505 gtcactattataattaaaaacttactttttagattcattgaacgattgatgtatgagatcattaatatagactatatacatcatttattcaatgaattta 604  Q
    ||||||||||||| |||||| |||| ||||| ||| ||| |   | || |||||  |||| ||| ||||||| |  ||||||||||| | ||||||||||    
T  24798133 gtcactattataagtaaaaatttacattttatatttattcatttaatggtgtatatgatctttattatagaccacgtacatcatttaatgaatgaattta 24798232  T
Q  605 aaaaataattttttgcttataatagtg 631  Q
    ||| || | ||||||||||||||||||    
T  24798233 aaatattaatttttgcttataatagtg 24798259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 569 - 631
Target Start/End: Original strand, 43616215 - 43616277
Alignment:
Q  569 atatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtg 631  Q
    ||||| |||| |||||||||||| | ||||||||||||||||   ||||||||||||||||||    
T  43616215 atatatactaaatacatcatttaataaatgaatttaaaaaattgatttttgcttataatagtg 43616277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 567 - 645
Target Start/End: Complemental strand, 44626234 - 44626156
Alignment:
Q  567 taatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggaggaagtac 645  Q
    |||||||||||| |||||| | |||||||||| || | ||||||||  ||||| ||||||||||| ||||||| |||||    
T  44626234 taatatagactagatacattagttattcaatgtatctgaaaaataaaattttgattataatagtgaccggagggagtac 44626156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 580 - 625
Target Start/End: Complemental strand, 12596735 - 12596690
Alignment:
Q  580 atacatcatttattcaatgaatttaaaaaataattttttgcttata 625  Q
    |||||| ||||||| |||||||||||||||||| ||||||||||||    
T  12596735 atacattatttattaaatgaatttaaaaaataaatttttgcttata 12596690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 528 - 612
Target Start/End: Complemental strand, 3345432 - 3345348
Alignment:
Q  528 actttttagattcattgaacgattgatgtatgagatcattaatatagactatatacatcatttattcaatgaatttaaaaaataa 612  Q
    ||||||||| |||||||||  ||||||||||  ||||  || || | || |||||||||| |||||||||||| |||||||||||    
T  3345432 actttttaggttcattgaataattgatgtatctgatccgtattacaaaccatatacatcaattattcaatgaacttaaaaaataa 3345348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 580 - 628
Target Start/End: Original strand, 7740571 - 7740619
Alignment:
Q  580 atacatcatttattcaatgaatttaaaaaataattttttgcttataata 628  Q
    |||||||||| ||| ||||||||||||| |||| |||||||||||||||    
T  7740571 atacatcattaatttaatgaatttaaaatataaatttttgcttataata 7740619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 562 - 618
Target Start/End: Original strand, 19936556 - 19936612
Alignment:
Q  562 atcattaatatagactatatacatcatttattcaatgaatttaaaaaataatttttt 618  Q
    ||||||| ||||||||| |||||||||||||||||| ||| |||||| | |||||||    
T  19936556 atcattattatagactagatacatcatttattcaataaatctaaaaagttatttttt 19936612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 575 - 639
Target Start/End: Original strand, 23568456 - 23568520
Alignment:
Q  575 actatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggagg 639  Q
    ||||||||||||||||| | ||||||| |||||  | | |||||||||||||||||| |||||||    
T  23568456 actatatacatcatttaatgaatgaatctaaaatgttagtttttgcttataatagtgaccggagg 23568520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 580 - 628
Target Start/End: Original strand, 32645575 - 32645623
Alignment:
Q  580 atacatcatttattcaatgaatttaaaaaataattttttgcttataata 628  Q
    |||||||| ||||||||||||| ||||| || |||||||||||||||||    
T  32645575 atacatcaattattcaatgaatctaaaacattattttttgcttataata 32645623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 580 - 640
Target Start/End: Complemental strand, 47181618 - 47181558
Alignment:
Q  580 atacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggagga 640  Q
    |||||||||||| | |||||||||||||  ||  |||||||||||||||||| ||||||||    
T  47181618 atacatcatttaatgaatgaatttaaaatgtagatttttgcttataatagtgaccggagga 47181558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 580 - 624
Target Start/End: Complemental strand, 47234406 - 47234362
Alignment:
Q  580 atacatcatttattcaatgaatttaaaaaataattttttgcttat 624  Q
    |||||| ||||||| ||||||||||||||||||||||||| ||||    
T  47234406 atacataatttattaaatgaatttaaaaaataattttttgtttat 47234362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 501 - 628
Target Start/End: Original strand, 4406243 - 4406370
Alignment:
Q  501 tccggtcactattataattaaaaacttactttttagattcattgaacgattgatgtatgagatcattaatatagactatatacatcatttattcaatgaa 600  Q
    ||||||||||||||||| ||||||   || ||||||||| ||| |   | ||||||||| | ||  ||||| |||| | |||||||||| ||| ||||||    
T  4406243 tccggtcactattataagtaaaaatcaacattttagatttattcattaaatgatgtatgtggtctataataaagaccacatacatcattaattgaatgaa 4406342  T
Q  601 tttaaaaaataattttttgcttataata 628  Q
    |  |||| |||| |||||||||||||||    
T  4406343 tccaaaatataaatttttgcttataata 4406370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 567 - 626
Target Start/End: Original strand, 17657975 - 17658034
Alignment:
Q  567 taatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataa 626  Q
    |||||||||||| ||| |||||||||| ||||||| ||||||||||  |||| |||||||    
T  17657975 taatatagactacatatatcatttattgaatgaatctaaaaaataaagttttacttataa 17658034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 541 - 644
Target Start/End: Original strand, 21790148 - 21790250
Alignment:
Q  541 attgaacgattgatgtatgagatcattaatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggagga 640  Q
    |||||| || ||||| ||| | ||||||||||| || | ||||||||||||||| || ||  ||||||    ||||||||||||||||||| ||||||||    
T  21790148 attgaatgagtgatgaatgtggtcattaatata-accacatacatcatttattcgataaacctaaaaatagtttttttgcttataatagtgtccggagga 21790246  T
Q  641 agta 644  Q
    ||||    
T  21790247 agta 21790250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 526 - 609
Target Start/End: Original strand, 25700484 - 25700567
Alignment:
Q  526 ttactttttagattcattgaacgattgatgtatgagatcattaatatagactatatacatcatttattcaatgaatttaaaaaa 609  Q
    |||||||||||||||||| |   | ||||||||| ||||   ||||||||| | |||||||||||||| ||||||| |||||||    
T  25700484 ttactttttagattcattcagtaaatgatgtatgtgatctacaatatagaccacatacatcatttattgaatgaatctaaaaaa 25700567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 590 - 645
Target Start/End: Complemental strand, 27990322 - 27990267
Alignment:
Q  590 tattcaatgaatttaaaaaataattttttgcttataatagtggccggaggaagtac 645  Q
    |||||||||||| |||||| |||||||||||||||||  ||| | |||||||||||    
T  27990322 tattcaatgaatctaaaaactaattttttgcttataaatgtgacgggaggaagtac 27990267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 500 - 607
Target Start/End: Original strand, 36072571 - 36072678
Alignment:
Q  500 ctccggtcactattataattaaaaacttactttttagattcattgaacgattgatgtatgagatcattaatatagactatatacatcatttattcaatga 599  Q
    ||||||||||||||||||  ||||  || | ||||||||||||| ||    ||||||||  | || ||| ||||||||| |||||||||||| | |||||    
T  36072571 ctccggtcactattataagcaaaattttgcattttagattcattcaatttatgatgtatatggtctttattatagactacatacatcatttaatgaatga 36072670  T
Q  600 atttaaaa 607  Q
    ||||||||    
T  36072671 atttaaaa 36072678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 569 - 628
Target Start/End: Complemental strand, 44171504 - 44171445
Alignment:
Q  569 atatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataata 628  Q
    ||||||| || |||||||||||||| |||||||||||||||| |  ||||| ||||||||    
T  44171504 atatagattacatacatcatttattgaatgaatttaaaaaattaacttttgtttataata 44171445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 590 - 628
Target Start/End: Complemental strand, 48002651 - 48002612
Alignment:
Q  590 tattcaatgaatttaaaaaata-attttttgcttataata 628  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  48002651 tattcaatgaatttaaaaaatatattttttgcttataata 48002612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 567 - 646
Target Start/End: Complemental strand, 55936059 - 55935981
Alignment:
Q  567 taatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggaggaagtact 646  Q
    ||||| |||| |||||||||||||| | ||||||| |||||  ||  |||||||||||||||||| |||||||| |||||    
T  55936059 taataaagacgatatacatcatttaatgaatgaatctaaaat-tatgtttttgcttataatagtgaccggaggatgtact 55935981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 569 - 627
Target Start/End: Original strand, 6087503 - 6087561
Alignment:
Q  569 atatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataat 627  Q
    |||||||||| |||||||||||||| ||| ||| | |||| ||| ||||||||||||||    
T  6087503 atatagactacatacatcatttattgaataaatctgaaaattaaatttttgcttataat 6087561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 569 - 631
Target Start/End: Complemental strand, 37255752 - 37255690
Alignment:
Q  569 atatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtg 631  Q
    |||||||| | |||||||||||||| ||||||| |||||||  |  |||||||||||||||||    
T  37255752 atatagaccacatacatcatttattgaatgaatctaaaaaaccaacttttgcttataatagtg 37255690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 569 - 631
Target Start/End: Original strand, 37255751 - 37255813
Alignment:
Q  569 atatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtg 631  Q
    ||||| |||| |||||| ||||||| |||||||||||||| | |  |||||||||||||||||    
T  37255751 atataaactacatacataatttattgaatgaatttaaaaagtgaacttttgcttataatagtg 37255813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 580 - 638
Target Start/End: Original strand, 56257416 - 56257474
Alignment:
Q  580 atacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggag 638  Q
    |||||| | ||||||||||||| |||||| ||| ||||| |||||||||||| ||||||    
T  56257416 atacatgagttattcaatgaatctaaaaagtaactttttacttataatagtgaccggag 56257474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 569 - 642
Target Start/End: Original strand, 3740378 - 3740451
Alignment:
Q  569 atatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggaggaag 642  Q
    |||||||||| || ||||||||||| ||||||  |||||| | |  ||||||||||| ||||| ||||||||||    
T  3740378 atatagactacatgcatcatttattgaatgaacctaaaaagtcaacttttgcttatattagtgaccggaggaag 3740451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 551 - 640
Target Start/End: Original strand, 6974985 - 6975074
Alignment:
Q  551 tgatgtatgagatcattaatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggagga 640  Q
    ||||||||  |||| ||| ||||||||| |||||||||| | | |||||||| ||||  |   |||||||||||||||||| ||||||||    
T  6974985 tgatgtatttgatctttattatagactacatacatcattaaatgaatgaattcaaaatgttgatttttgcttataatagtgaccggagga 6975074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 580 - 625
Target Start/End: Original strand, 16040042 - 16040086
Alignment:
Q  580 atacatcatttattcaatgaatttaaaaaataattttttgcttata 625  Q
    |||||||||||||| ||||||||| |||||||| ||||||||||||    
T  16040042 atacatcatttattgaatgaattt-aaaaataaatttttgcttata 16040086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 569 - 646
Target Start/End: Complemental strand, 16912509 - 16912432
Alignment:
Q  569 atatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggaggaagtact 646  Q
    |||||||||| |||||||||||||| ||||||| |||||| ||   |||| ||||||||| ||  |||||| ||||||    
T  16912509 atatagactacatacatcatttattgaatgaatctaaaaattacacttttacttataatattgatcggagggagtact 16912432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 567 - 628
Target Start/End: Original strand, 21142158 - 21142219
Alignment:
Q  567 taatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataata 628  Q
    ||||| |||| |||||||||||| ||| ||||||| ||||| ||||  ||||||||||||||    
T  21142158 taataaagaccatatacatcattaattaaatgaatctaaaatataaacttttgcttataata 21142219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 571 - 628
Target Start/End: Original strand, 31280405 - 31280462
Alignment:
Q  571 atagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataata 628  Q
    |||||||| || ||||||||||| ||||||  |||||||||| |||||| ||||||||    
T  31280405 atagactacattcatcatttattaaatgaacctaaaaaataaatttttgtttataata 31280462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 531 - 600
Target Start/End: Complemental strand, 32645602 - 32645533
Alignment:
Q  531 ttttagattcattgaacgattgatgtatgagatcattaatatagactatatacatcatttattcaatgaa 600  Q
    ||||||||||||||||  ||||||||||  | ||| ||  |||||||| |||||||| ||||||||||||    
T  32645602 ttttagattcattgaataattgatgtatttggtcaatataatagactaaatacatcagttattcaatgaa 32645533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 580 - 637
Target Start/End: Original strand, 35009100 - 35009157
Alignment:
Q  580 atacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccgga 637  Q
    |||||||| ||||| ||| || || ||||||||||||||| ||||||||||| |||||    
T  35009100 atacatcaattattgaataaacttcaaaaataattttttgtttataatagtgaccgga 35009157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 567 - 628
Target Start/End: Complemental strand, 36491097 - 36491037
Alignment:
Q  567 taatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataata 628  Q
    ||||||| |||| ||||||||  |||||||||||| |||||||| | |||||||||||||||    
T  36491097 taatataaactagatacatcaaatattcaatgaatgtaaaaaatga-tttttgcttataata 36491037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 500 - 637
Target Start/End: Complemental strand, 52281257 - 52281120
Alignment:
Q  500 ctccggtcactattataattaaaaacttactttttagattcattgaacgattgatgtatgagatcattaatatagactatatacatcatttattcaatga 599  Q
    |||||||||||||| ||| || ||| |||| ||| | ||||||| ||  |  |||| ||| | || ||| |||| |||| |||||||||||||| |||||    
T  52281257 ctccggtcactattgtaaatagaaatttacatttgatattcattcaattaaggatgcatgtggtctttattatatactacatacatcatttattgaatga 52281158  T
Q  600 atttaaaaaataattttttgcttataatagtggccgga 637  Q
    || |||||   |  |||||||||||||||||| |||||    
T  52281157 atataaaatgcatatttttgcttataatagtgaccgga 52281120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 570 - 631
Target Start/End: Original strand, 52914069 - 52914130
Alignment:
Q  570 tatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtg 631  Q
    ||||||| | |||||||||||| | ||||||| ||||| || | ||||||||||||||||||    
T  52914069 tatagaccacatacatcatttaatgaatgaatctaaaatattaatttttgcttataatagtg 52914130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 580 - 625
Target Start/End: Original strand, 54106556 - 54106601
Alignment:
Q  580 atacatcatttattcaatgaatttaaaaaataattttttgcttata 625  Q
    |||||||||||||| ||||||| ||||| |||| ||||||||||||    
T  54106556 atacatcatttattgaatgaatctaaaacataaatttttgcttata 54106601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 580 - 625
Target Start/End: Complemental strand, 54508228 - 54508183
Alignment:
Q  580 atacatcatttattcaatgaatttaaaaaataattttttgcttata 625  Q
    |||||||||||||| ||||||| ||||| |||| ||||||||||||    
T  54508228 atacatcatttattgaatgaatctaaaatataaatttttgcttata 54508183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0531 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0531
Description:

Target: scaffold0531; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 569 - 642
Target Start/End: Original strand, 6924 - 6997
Alignment:
Q  569 atatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggaggaag 642  Q
    |||||| ||| ||||||||||||||||||||||||||||  | |||| |||||||||||| || ||||||||||    
T  6924 atatagtctaaatacatcatttattcaatgaatttaaaatgtgatttgttgcttataataatgaccggaggaag 6997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 527 - 631
Target Start/End: Complemental strand, 14173502 - 14173398
Alignment:
Q  527 tactttttagattcattgaacgattgatgtatgagatcattaatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataa 626  Q
    ||||| ||||||||||| ||  | ||||||||| | ||| || ||||||||| |||| ||||||||| ||||||| |||||| ||  |||||||||||||    
T  14173502 tacttcttagattcattcaataaatgatgtatgtggtcaatattatagactacatacttcatttattgaatgaatctaaaaattagatttttgcttataa 14173403  T
Q  627 tagtg 631  Q
    |||||    
T  14173402 tagtg 14173398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 527 - 631
Target Start/End: Complemental strand, 14178038 - 14177934
Alignment:
Q  527 tactttttagattcattgaacgattgatgtatgagatcattaatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataa 626  Q
    ||||| ||||||||||| ||  | ||||||||| | ||| || ||||||||| |||| ||||||||| ||||||| |||||| ||  |||||||||||||    
T  14178038 tacttcttagattcattcaataaatgatgtatgtggtcaatattatagactacatacttcatttattgaatgaatctaaaaattagatttttgcttataa 14177939  T
Q  627 tagtg 631  Q
    |||||    
T  14177938 tagtg 14177934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 503 - 639
Target Start/End: Original strand, 11073465 - 11073604
Alignment:
Q  503 cggtcactattataattaaaaacttactttttagattcattgaacgattgatgtatgagatcattaatata----gactatatacatcatttattcaatg 598  Q
    ||||||||||||||| |||||  |||||| ||||||| || ||| || |||| |||| || ||||||||||    ||  | |||||||||||||| ||||    
T  11073465 cggtcactattataagtaaaatattacttgttagattaatagaatgagtgatatatgtgaccattaatatatatagatcaaatacatcatttatttaatg 11073564  T
Q  599 aatttaaaaaataattttttgcttataatagtggccggagg 639  Q
    ||  ||||| |||||||||||||||||||| || |||||||    
T  11073565 aacctaaaa-ataattttttgcttataataatgaccggagg 11073604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 507 - 597
Target Start/End: Original strand, 33472694 - 33472784
Alignment:
Q  507 cactattataattaaaaacttactttttagattcattgaacgattgatgtatgagatcattaatatagactatatacatcatttattcaat 597  Q
    ||||||||||| ||||||| || |||||| ||||||| || || ||||||||| |||||||||||||||  | |||||| |||||| ||||    
T  33472694 cactattataagtaaaaacatattttttaaattcattaaatgagtgatgtatgtgatcattaatatagatcaaatacattatttatccaat 33472784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 500 - 644
Target Start/End: Complemental strand, 3203810 - 3203666
Alignment:
Q  500 ctccggtcactattataattaaaaacttactttttagattcattgaacgattgatgtatgagatcattaatatagactatatacatcatttattcaatga 599  Q
    |||| |||||||||||||  |||||   ||||||||| |||||| ||  | ||||||||  | |||  ||||||||||  |||||||||| ||| |||||    
T  3203810 ctccagtcactattataagcaaaaatcaactttttaggttcatttaataaatgatgtatttggtcaagaatatagacttgatacatcattcattgaatga 3203711  T
Q  600 atttaaaaaataattttttgcttataatagtggccggaggaagta 644  Q
    |  ||||||||   |||||||||||||||||| ||||||| ||||    
T  3203710 acctaaaaaattgatttttgcttataatagtgaccggagggagta 3203666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 578 - 626
Target Start/End: Complemental strand, 3846492 - 3846444
Alignment:
Q  578 atatacatcatttattcaatgaatttaaaaaataattttttgcttataa 626  Q
    |||||||| |||||||||||||| ||||||||| |||||||||||||||    
T  3846492 atatacattatttattcaatgaacttaaaaaattattttttgcttataa 3846444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 569 - 641
Target Start/End: Complemental strand, 8029579 - 8029507
Alignment:
Q  569 atatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggaggaa 641  Q
    |||||| ||| ||||||||||||||||||||||||||||  | |||| || ||||||||| || |||||||||    
T  8029579 atatagtctaaatacatcatttattcaatgaatttaaaatgtgatttgtttcttataataatgaccggaggaa 8029507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 578 - 638
Target Start/End: Complemental strand, 11637231 - 11637171
Alignment:
Q  578 atatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggag 638  Q
    |||||||||||| ||| |||||||||||||  |||| ||||||||||||||||| ||||||    
T  11637231 atatacatcattaattgaatgaatttaaaatgtaatgttttgcttataatagtgaccggag 11637171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 500 - 608
Target Start/End: Complemental strand, 16121104 - 16120996
Alignment:
Q  500 ctccggtcactattataattaaaaacttactttttagattcattgaacgattgatgtatgagatcattaatatagactatatacatcatttattcaatga 599  Q
    ||||| ||||||||||||  |||||   |||||||||||||||| ||  | ||||||||  | ||| |||||||||| |  ||||||||||||| |||||    
T  16121104 ctccgatcactattataagcaaaaatcaactttttagattcattaaataaatgatgtatttggtcaataatatagaccaagtacatcatttattgaatga 16121005  T
Q  600 atttaaaaa 608  Q
    |||||||||    
T  16121004 atttaaaaa 16120996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 500 - 607
Target Start/End: Complemental strand, 10258443 - 10258336
Alignment:
Q  500 ctccggtcactattataattaaaaacttactttttagattcattgaacgattgatgtatgagatcattaatatagactatatacatcatttattcaatga 599  Q
    ||||| ||| |||||||| |||||| | |||||||||||||||| ||  | ||||||||  | |||||| ||||||| || ||||||||||| | |||||    
T  10258443 ctccgatcattattataagtaaaaaataactttttagattcattcaattaatgatgtatatggtcattattatagaccatgtacatcatttaataaatga 10258344  T
Q  600 atttaaaa 607  Q
    || |||||    
T  10258343 atctaaaa 10258336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 501 - 631
Target Start/End: Complemental strand, 12383727 - 12383597
Alignment:
Q  501 tccggtcactattataattaaaaacttactttttagattcattgaacgattgatgtatgagatcattaatatagactatatacatcatttattcaatgaa 600  Q
    |||||||||||||||||  |||||  ||| ||||||||| ||| ||  | |||||||   |||| ||| ||||||||| |||||||||| |   ||||||    
T  12383727 tccggtcactattataaacaaaaatctacattttagattaattcaattaatgatgtacatgatctttattatagactacatacatcattaaccgaatgaa 12383628  T
Q  601 tttaaaaaataattttttgcttataatagtg 631  Q
    |||||||  ||| ||||| ||||||||||||    
T  12383627 tttaaaatgtaaatttttacttataatagtg 12383597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 580 - 646
Target Start/End: Complemental strand, 33472745 - 33472679
Alignment:
Q  580 atacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggaggaagtact 646  Q
    |||||||| | ||| |||||||||||||||||  ||||| |||||||||||||| ||||| ||||||    
T  33472745 atacatcactcatttaatgaatttaaaaaatatgtttttacttataatagtggcgggagggagtact 33472679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 569 - 630
Target Start/End: Complemental strand, 18491731 - 18491670
Alignment:
Q  569 atatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagt 630  Q
    |||||||||| ||||||||||| || ||||||| |||||| | ||||||| |||||||||||    
T  18491731 atatagactacatacatcatttgttaaatgaatctaaaaagtgatttttttcttataatagt 18491670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 580 - 612
Target Start/End: Original strand, 12154066 - 12154098
Alignment:
Q  580 atacatcatttattcaatgaatttaaaaaataa 612  Q
    |||||||||||||||||||||||||||||||||    
T  12154066 atacatcatttattcaatgaatttaaaaaataa 12154098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 503 - 639
Target Start/End: Complemental strand, 34379871 - 34379736
Alignment:
Q  503 cggtcactattataattaaaaacttactttttagattcattgaacgattgatgtatgagatcattaatatagactatatacatcatttattcaatgaatt 602  Q
    |||||||||||||||  |||||   || ||||||||||||| |   | ||||||||| | ||  ||||| |||| |||||||||||||| | |||||||     
T  34379871 cggtcactattataagcaaaaatcaacattttagattcattcattaaatgatgtatgtggtcgataataaagacgatatacatcatttaatgaatgaatc 34379772  T
Q  603 taaaaaataattttttgcttataatagtggccggagg 639  Q
    |||||  ||  |||||||||||||||||| |||||||    
T  34379771 taaaat-tatgtttttgcttataatagtgaccggagg 34379736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 506 - 593
Target Start/End: Original strand, 6032973 - 6033060
Alignment:
Q  506 tcactattataattaaaaacttactttttagattcattgaacgattgatgtatgagatcattaatatagactatatacatcatttatt 593  Q
    |||||||||||| |||||| | |  ||||||||||||| ||  | | ||||||| | || ||||||||||||| ||||||||||||||    
T  6032973 tcactattataagtaaaaattgatattttagattcatttaataaataatgtatgtggtctttaatatagactacatacatcatttatt 6033060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 500 - 639
Target Start/End: Original strand, 6560658 - 6560797
Alignment:
Q  500 ctccggtcactattataattaaaaacttactttttagattcattgaacgattgatgtatgagatcattaatatagactatatacatcatttattcaatga 599  Q
    |||||||||||| |||||  |||||  ||| |||||| |||||| |   | ||||||||| | ||  ||||| ||||||| | ||||||| | | |||||    
T  6560658 ctccggtcactaatataagcaaaaaactacattttaggttcattcatttaatgatgtatgtggtctataataaagactatgtgcatcattaaatgaatga 6560757  T
Q  600 atttaaaaaataattttttgcttataatagtggccggagg 639  Q
    || |||||  |||||||||||||||| ||||| |||||||    
T  6560758 atctaaaatgtaattttttgcttatattagtgaccggagg 6560797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 580 - 631
Target Start/End: Original strand, 15718474 - 15718525
Alignment:
Q  580 atacatcatttattcaatgaatttaaaaaataattttttgcttataatagtg 631  Q
    |||||||||||||| ||||||||| |||| | | ||||||||||||||||||    
T  15718474 atacatcatttattgaatgaattttaaaagtgaatttttgcttataatagtg 15718525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 506 - 639
Target Start/End: Original strand, 28991454 - 28991589
Alignment:
Q  506 tcactattataattaaaaactta-ctttttagattcattgaacgattgatgtatgagatcattaatatagactatatacatcatttatt-caatgaattt 603  Q
    |||||||||||| |||||| ||  | ||||||||||||| ||  | ||||||||| |||  |||||||| |||| ||||||||||||||  ||||||| |    
T  28991454 tcactattataagtaaaaaattgtcattttagattcattcaataactgatgtatgtgatttttaatatatactacatacatcatttattgaaatgaatct 28991553  T
Q  604 aaaaaataattttttgcttataatagtggccggagg 639  Q
    |||| ||   ||||| |||||||||||  |||||||    
T  28991554 aaaatatttatttttacttataatagtaaccggagg 28991589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 571 - 630
Target Start/End: Original strand, 30013830 - 30013889
Alignment:
Q  571 atagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagt 630  Q
    ||||||||||||||||| ||||||||||| ||||| || |  ||| ||||||||||||||    
T  30013830 atagactatatacatcaattattcaatgattttaacaagttgtttcttgcttataatagt 30013889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 578 - 640
Target Start/End: Original strand, 8449655 - 8449717
Alignment:
Q  578 atatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggagga 640  Q
    |||| ||||||| ||| ||||||| ||||| || | |||||||||||||||||| ||||||||    
T  8449655 atatgcatcattaattgaatgaatctaaaatattaatttttgcttataatagtgaccggagga 8449717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 578 - 640
Target Start/End: Original strand, 8458459 - 8458521
Alignment:
Q  578 atatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggagga 640  Q
    |||| ||||||| ||| ||||||| ||||| || | |||||||||||||||||| ||||||||    
T  8458459 atatgcatcattaattgaatgaatctaaaatattaatttttgcttataatagtgaccggagga 8458521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 580 - 625
Target Start/End: Original strand, 8030396 - 8030441
Alignment:
Q  580 atacatcatttattcaatgaatttaaaaaataattttttgcttata 625  Q
    |||||| ||||||| ||||||||||||| |||| ||||||||||||    
T  8030396 atacattatttattgaatgaatttaaaagataaatttttgcttata 8030441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 500 - 645
Target Start/End: Complemental strand, 17773640 - 17773495
Alignment:
Q  500 ctccggtcactattataattaaaaacttactttttagattcattgaacgattgatgtatgagatcattaatatagactatatacatcatttattcaatga 599  Q
    |||||||||||| |||||  |||||  |||||||||||| |||| ||  | ||||||||| |||   ||||| |||| | |||||||||||||| ||||     
T  17773640 ctccggtcactaatataagcaaaaatctactttttagatacattcaattaatgatgtatgtgatatataataaagaccacatacatcatttattgaatgt 17773541  T
Q  600 atttaaaaaataattttttgcttataatagtggccggaggaagtac 645  Q
    || |||||| |   |||||| ||||| ||||| || ||||| ||||    
T  17773540 atctaaaaagtggatttttgtttatattagtgaccagaggatgtac 17773495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 574 - 631
Target Start/End: Complemental strand, 29418999 - 29418942
Alignment:
Q  574 gactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtg 631  Q
    ||||| |||||||||| ||| ||| ||| |||||  ||||||||||||||||||||||    
T  29418999 gactacatacatcattaattgaattaatgtaaaatgtaattttttgcttataatagtg 29418942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 570 - 639
Target Start/End: Original strand, 24677 - 24746
Alignment:
Q  570 tatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggagg 639  Q
    ||||||| | |||||||||||| | ||||||| ||||| || | |||||||||||||||||| |||||||    
T  24677 tatagaccacatacatcatttaatgaatgaatctaaaatattaatttttgcttataatagtgaccggagg 24746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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