View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5174-Insertion-2 (Length: 651)

Name: NF5174-Insertion-2
Description: NF5174
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5174-Insertion-2
NF5174-Insertion-2
[»] chr1 (66 HSPs)
chr1 (8-614)||(18569613-18570223)
chr1 (414-532)||(38834606-38834724)
chr1 (388-532)||(15057658-15057802)
chr1 (414-516)||(5246169-5246270)
chr1 (389-506)||(748670-748787)
chr1 (388-532)||(34768274-34768417)
chr1 (457-525)||(47446701-47446769)
chr1 (394-464)||(39617315-39617385)
chr1 (468-517)||(25554553-25554602)
chr1 (389-518)||(42761455-42761584)
chr1 (388-532)||(5431336-5431479)
chr1 (419-527)||(15351715-15351823)
chr1 (457-533)||(19580263-19580339)
chr1 (455-519)||(34953964-34954028)
chr1 (468-527)||(14214610-14214669)
chr1 (468-535)||(15057649-15057716)
chr1 (388-519)||(34953904-34954035)
chr1 (393-519)||(8243365-8243491)
chr1 (393-519)||(20423148-20423274)
chr1 (460-522)||(26158713-26158775)
chr1 (460-522)||(26172011-26172073)
chr1 (456-506)||(29064174-29064224)
chr1 (457-519)||(39940556-39940618)
chr1 (457-519)||(42660425-42660487)
chr1 (458-519)||(3906832-3906893)
chr1 (455-528)||(6758545-6758618)
chr1 (388-533)||(9675967-9676112)
chr1 (458-519)||(20273191-20273252)
chr1 (460-513)||(26937875-26937928)
chr1 (468-532)||(748730-748794)
chr1 (468-527)||(1409130-1409189)
chr1 (419-495)||(20621262-20621338)
chr1 (463-527)||(23398419-23398483)
chr1 (455-527)||(27206759-27206831)
chr1 (457-529)||(42915716-42915788)
chr1 (468-516)||(48781349-48781397)
chr1 (388-431)||(14214625-14214668)
chr1 (455-526)||(14891806-14891877)
chr1 (468-519)||(19175669-19175720)
chr1 (388-431)||(39940582-39940625)
chr1 (467-518)||(42660366-42660417)
chr1 (468-526)||(5431421-5431479)
chr1 (457-519)||(10256789-10256851)
chr1 (455-525)||(33765789-33765859)
chr1 (457-519)||(39393042-39393104)
chr1 (452-518)||(39619201-39619267)
chr1 (468-526)||(46906862-46906920)
chr1 (389-431)||(47446727-47446769)
chr1 (457-519)||(52112884-52112946)
chr1 (466-527)||(3013689-3013750)
chr1 (386-431)||(5431340-5431385)
chr1 (455-496)||(19771176-19771217)
chr1 (458-519)||(27936742-27936803)
chr1 (458-527)||(29302136-29302205)
chr1 (416-497)||(50155332-50155413)
chr1 (455-519)||(3013618-3013682)
chr1 (396-516)||(3549788-3549908)
chr1 (468-512)||(8984203-8984247)
chr1 (418-518)||(9002738-9002838)
chr1 (468-519)||(10015122-10015174)
chr1 (464-532)||(10256846-10256913)
chr1 (472-532)||(13319904-13319964)
chr1 (468-532)||(19580179-19580243)
chr1 (455-519)||(26344228-26344292)
chr1 (482-514)||(42074146-42074178)
chr1 (455-515)||(43318076-43318136)
[»] chr3 (50 HSPs)
chr3 (388-532)||(39964290-39964436)
chr3 (388-519)||(39682617-39682748)
chr3 (415-532)||(27161440-27161557)
chr3 (455-527)||(10872740-10872812)
chr3 (388-527)||(29720077-29720216)
chr3 (388-519)||(12744902-12745033)
chr3 (391-516)||(24596895-24597020)
chr3 (455-519)||(3648767-3648831)
chr3 (455-527)||(12744901-12744973)
chr3 (466-518)||(54690833-54690885)
chr3 (457-532)||(4190624-4190699)
chr3 (468-519)||(34365123-34365174)
chr3 (457-532)||(36571370-36571445)
chr3 (468-519)||(50603594-50603645)
chr3 (457-519)||(2128431-2128493)
chr3 (458-532)||(8036531-8036605)
chr3 (455-527)||(331866-331938)
chr3 (463-527)||(7882281-7882345)
chr3 (459-527)||(40639781-40639849)
chr3 (468-511)||(11041620-11041663)
chr3 (416-495)||(29290811-29290890)
chr3 (468-527)||(54273399-54273458)
chr3 (457-519)||(611590-611652)
chr3 (468-526)||(2313002-2313060)
chr3 (469-527)||(9170112-9170170)
chr3 (419-513)||(27707192-27707286)
chr3 (392-518)||(41743599-41743725)
chr3 (469-519)||(45736769-45736819)
chr3 (468-525)||(105374-105431)
chr3 (391-516)||(334676-334801)
chr3 (455-512)||(4980341-4980398)
chr3 (458-519)||(24722695-24722756)
chr3 (466-519)||(29389335-29389388)
chr3 (468-525)||(36270070-36270127)
chr3 (391-519)||(36344377-36344506)
chr3 (455-516)||(40169068-40169129)
chr3 (467-532)||(50335001-50335065)
chr3 (455-527)||(8439326-8439398)
chr3 (468-528)||(21217165-21217225)
chr3 (459-519)||(22496959-22497019)
chr3 (449-533)||(26104768-26104852)
chr3 (455-519)||(30578290-30578354)
chr3 (416-512)||(32711221-32711317)
chr3 (458-506)||(33068213-33068261)
chr3 (478-514)||(33068283-33068319)
chr3 (469-525)||(36566717-36566773)
chr3 (455-519)||(40470426-40470490)
chr3 (466-526)||(47334643-47334703)
chr3 (468-516)||(50603536-50603584)
chr3 (468-540)||(52168270-52168342)
[»] chr2 (51 HSPs)
chr2 (392-532)||(44587638-44587778)
chr2 (457-519)||(45472418-45472480)
chr2 (455-516)||(10996257-10996318)
chr2 (388-519)||(41824269-41824399)
chr2 (452-518)||(8778645-8778711)
chr2 (389-526)||(42530494-42530631)
chr2 (388-532)||(20218547-20218691)
chr2 (458-518)||(38871453-38871513)
chr2 (451-519)||(40363227-40363295)
chr2 (455-527)||(41805274-41805346)
chr2 (473-531)||(2144054-2144113)
chr2 (388-527)||(11726496-11726634)
chr2 (456-527)||(38181829-38181900)
chr2 (458-528)||(33775487-33775557)
chr2 (458-532)||(37109032-37109106)
chr2 (457-519)||(44094870-44094932)
chr2 (458-519)||(44089434-44089495)
chr2 (388-533)||(44274543-44274687)
chr2 (455-507)||(14796898-14796950)
chr2 (457-517)||(14952775-14952835)
chr2 (483-527)||(15446779-15446823)
chr2 (459-519)||(15446850-15446910)
chr2 (458-506)||(15969467-15969515)
chr2 (416-519)||(29765671-29765775)
chr2 (458-518)||(36104362-36104422)
chr2 (465-528)||(22373609-22373672)
chr2 (469-519)||(27328255-27328306)
chr2 (468-534)||(27964364-27964428)
chr2 (468-527)||(32143406-32143465)
chr2 (468-519)||(44587724-44587775)
chr2 (461-519)||(7079444-7079502)
chr2 (477-519)||(34359581-34359623)
chr2 (460-513)||(10222045-10222098)
chr2 (466-519)||(11342049-11342102)
chr2 (468-525)||(13333528-13333585)
chr2 (468-513)||(14308727-14308772)
chr2 (455-528)||(27331827-27331900)
chr2 (456-525)||(34359627-34359696)
chr2 (471-532)||(36129237-36129298)
chr2 (458-519)||(37182887-37182948)
chr2 (391-496)||(40255508-40255612)
chr2 (468-528)||(3098207-3098267)
chr2 (468-528)||(3123984-3124044)
chr2 (463-527)||(8510581-8510645)
chr2 (468-516)||(14803048-14803096)
chr2 (468-528)||(25270937-25270997)
chr2 (457-541)||(27964270-27964354)
chr2 (414-442)||(31952848-31952876)
chr2 (466-534)||(40204433-40204501)
chr2 (456-516)||(40534528-40534588)
chr2 (457-529)||(44274540-44274612)
[»] chr8 (43 HSPs)
chr8 (389-519)||(12736357-12736488)
chr8 (460-519)||(13841856-13841915)
chr8 (456-541)||(10934589-10934674)
chr8 (453-525)||(24052894-24052966)
chr8 (468-519)||(1988924-1988975)
chr8 (388-519)||(24820306-24820436)
chr8 (454-496)||(9812493-9812535)
chr8 (465-519)||(28480717-28480771)
chr8 (457-514)||(30114812-30114868)
chr8 (388-516)||(2627175-2627303)
chr8 (455-527)||(5888404-5888476)
chr8 (455-519)||(13964427-13964491)
chr8 (455-519)||(17871831-17871895)
chr8 (468-532)||(44329152-44329216)
chr8 (388-519)||(5888344-5888475)
chr8 (466-525)||(10117049-10117108)
chr8 (398-517)||(16489149-16489268)
chr8 (457-516)||(20269775-20269834)
chr8 (457-516)||(21056404-21056463)
chr8 (468-527)||(24820378-24820437)
chr8 (455-498)||(34181571-34181614)
chr8 (449-527)||(31271594-31271672)
chr8 (455-525)||(41387830-41387900)
chr8 (458-528)||(42749054-42749124)
chr8 (389-434)||(6883627-6883672)
chr8 (416-489)||(10184593-10184666)
chr8 (458-527)||(24053597-24053666)
chr8 (458-527)||(24287785-24287854)
chr8 (457-514)||(24418950-24419007)
chr8 (458-527)||(33070165-33070234)
chr8 (457-498)||(38779262-38779303)
chr8 (419-496)||(43295920-43295997)
chr8 (458-534)||(2296467-2296543)
chr8 (455-495)||(6189702-6189742)
chr8 (453-497)||(8739664-8739708)
chr8 (456-516)||(9550124-9550184)
chr8 (389-489)||(10117008-10117108)
chr8 (483-527)||(13496531-13496575)
chr8 (457-533)||(24418875-24418951)
chr8 (468-528)||(36696424-36696484)
chr8 (457-516)||(37508946-37509006)
chr8 (388-527)||(40098761-40098900)
chr8 (455-519)||(45045445-45045509)
[»] chr7 (63 HSPs)
chr7 (388-524)||(3967706-3967842)
chr7 (388-532)||(37491268-37491412)
chr7 (416-527)||(43813125-43813236)
chr7 (479-532)||(47712474-47712527)
chr7 (455-525)||(34478303-34478373)
chr7 (388-532)||(47534971-47535116)
chr7 (457-533)||(8169166-8169242)
chr7 (439-519)||(31319568-31319648)
chr7 (388-519)||(23797356-23797487)
chr7 (389-488)||(47708403-47708502)
chr7 (458-516)||(24617808-24617866)
chr7 (407-505)||(47538780-47538877)
chr7 (407-505)||(47545337-47545434)
chr7 (468-525)||(2943293-2943350)
chr7 (458-527)||(8595147-8595216)
chr7 (458-527)||(16777892-16777961)
chr7 (388-532)||(34750323-34750468)
chr7 (469-533)||(34750410-34750475)
chr7 (457-518)||(38940289-38940350)
chr7 (454-527)||(43103072-43103145)
chr7 (388-484)||(2456337-2456433)
chr7 (463-527)||(5950270-5950334)
chr7 (391-527)||(8447717-8447853)
chr7 (455-527)||(8571450-8571522)
chr7 (388-528)||(10422807-10422947)
chr7 (391-519)||(44182530-44182657)
chr7 (460-527)||(15051083-15051150)
chr7 (468-519)||(20559606-20559657)
chr7 (468-519)||(47708409-47708460)
chr7 (392-434)||(2456674-2456716)
chr7 (394-488)||(3105953-3106047)
chr7 (457-519)||(11602837-11602899)
chr7 (469-527)||(21886467-21886525)
chr7 (393-519)||(27554503-27554629)
chr7 (459-533)||(28285461-28285535)
chr7 (455-533)||(46648339-46648417)
chr7 (468-526)||(47534971-47535029)
chr7 (388-506)||(47712480-47712598)
chr7 (458-527)||(2360449-2360518)
chr7 (466-519)||(3105954-3106007)
chr7 (451-496)||(27115299-27115344)
chr7 (419-488)||(32549860-32549929)
chr7 (468-525)||(36502327-36502384)
chr7 (466-519)||(37491352-37491405)
chr7 (468-532)||(2456331-2456395)
chr7 (476-532)||(2456670-2456726)
chr7 (456-496)||(2610260-2610300)
chr7 (456-496)||(7456454-7456494)
chr7 (459-527)||(10095719-10095787)
chr7 (455-527)||(12274877-12274949)
chr7 (460-496)||(16861547-16861583)
chr7 (439-495)||(18819983-18820039)
chr7 (463-519)||(19688107-19688163)
chr7 (468-516)||(21387657-21387705)
chr7 (463-535)||(21857061-21857133)
chr7 (456-496)||(24163342-24163382)
chr7 (455-519)||(30138856-30138920)
chr7 (457-533)||(30457800-30457876)
chr7 (461-525)||(31813413-31813477)
chr7 (455-527)||(34703511-34703583)
chr7 (468-532)||(34840609-34840673)
chr7 (456-528)||(36547655-36547727)
chr7 (416-496)||(41395697-41395777)
[»] chr5 (46 HSPs)
chr5 (388-524)||(13654510-13654645)
chr5 (394-532)||(1098635-1098772)
chr5 (394-519)||(3100413-3100538)
chr5 (454-506)||(27094313-27094365)
chr5 (456-518)||(238795-238857)
chr5 (391-524)||(892555-892688)
chr5 (458-519)||(14107537-14107598)
chr5 (457-518)||(15311928-15311989)
chr5 (450-532)||(32911555-32911638)
chr5 (457-532)||(40100082-40100157)
chr5 (457-519)||(27895905-27895967)
chr5 (466-527)||(71259-71320)
chr5 (458-527)||(5504377-5504446)
chr5 (455-524)||(14772614-14772683)
chr5 (468-513)||(30780151-30780196)
chr5 (388-525)||(42910714-42910851)
chr5 (392-532)||(13391536-13391676)
chr5 (457-513)||(17768077-17768133)
chr5 (388-527)||(26300111-26300250)
chr5 (468-532)||(28499777-28499841)
chr5 (457-536)||(1098619-1098698)
chr5 (468-527)||(13356218-13356277)
chr5 (468-527)||(25792927-25792986)
chr5 (456-518)||(33867933-33867996)
chr5 (455-513)||(5003978-5004036)
chr5 (458-532)||(5240221-5240295)
chr5 (467-513)||(12646584-12646630)
chr5 (471-525)||(25358060-25358114)
chr5 (455-517)||(30371401-30371463)
chr5 (465-519)||(32398081-32398135)
chr5 (468-518)||(36897751-36897801)
chr5 (463-532)||(40100162-40100232)
chr5 (458-527)||(1996847-1996916)
chr5 (455-532)||(7613353-7613430)
chr5 (416-485)||(15969101-15969170)
chr5 (468-513)||(25408624-25408669)
chr5 (458-527)||(27314475-27314544)
chr5 (455-496)||(39785129-39785170)
chr5 (457-505)||(3662359-3662407)
chr5 (457-513)||(12645418-12645474)
chr5 (458-518)||(14303098-14303158)
chr5 (468-528)||(17153504-17153564)
chr5 (478-514)||(19087791-19087827)
chr5 (468-516)||(23262515-23262563)
chr5 (419-527)||(25408543-25408651)
chr5 (455-519)||(35942080-35942144)
[»] chr4 (68 HSPs)
chr4 (416-532)||(22235289-22235405)
chr4 (418-519)||(31089917-31090020)
chr4 (392-506)||(49229187-49229301)
chr4 (389-528)||(29006837-29006976)
chr4 (391-532)||(11796589-11796729)
chr4 (465-519)||(21208652-21208706)
chr4 (389-518)||(5816548-5816677)
chr4 (460-519)||(3094275-3094334)
chr4 (468-527)||(54164894-54164953)
chr4 (388-434)||(56257428-56257474)
chr4 (457-518)||(2254023-2254084)
chr4 (468-525)||(6462793-6462850)
chr4 (468-525)||(29006837-29006894)
chr4 (466-519)||(38539486-38539539)
chr4 (455-516)||(38949750-38949811)
chr4 (468-528)||(38381975-38382035)
chr4 (468-528)||(48402492-48402552)
chr4 (388-527)||(54164813-54164952)
chr4 (468-519)||(19934719-19934770)
chr4 (468-519)||(26636521-26636572)
chr4 (468-519)||(26863106-26863157)
chr4 (457-519)||(5535722-5535784)
chr4 (457-519)||(43616215-43616277)
chr4 (455-533)||(44626156-44626234)
chr4 (468-513)||(12596690-12596735)
chr4 (394-506)||(19936502-19936612)
chr4 (468-516)||(7740571-7740619)
chr4 (388-527)||(19934638-19934777)
chr4 (463-527)||(23568456-23568520)
chr4 (468-516)||(32645575-32645623)
chr4 (468-528)||(47181558-47181618)
chr4 (468-512)||(47234362-47234406)
chr4 (390-526)||(54106476-54106612)
chr4 (389-488)||(14351302-14351401)
chr4 (455-514)||(17657975-17658034)
chr4 (478-533)||(27990267-27990322)
chr4 (388-519)||(38381977-38382108)
chr4 (457-516)||(44171445-44171504)
chr4 (478-516)||(48002612-48002651)
chr4 (455-534)||(55935981-55936059)
chr4 (457-515)||(6087503-6087561)
chr4 (419-513)||(20598271-20598365)
chr4 (469-519)||(24798209-24798259)
chr4 (457-519)||(37255690-37255752)
chr4 (457-519)||(37255751-37255813)
chr4 (389-538)||(40814670-40814820)
chr4 (468-526)||(56257416-56257474)
chr4 (457-530)||(3740378-3740451)
chr4 (468-513)||(16040042-16040086)
chr4 (457-534)||(16912432-16912509)
chr4 (455-516)||(21142158-21142219)
chr4 (451-532)||(21790170-21790250)
chr4 (459-516)||(31280405-31280462)
chr4 (468-525)||(35009100-35009157)
chr4 (455-516)||(36491037-36491097)
chr4 (458-519)||(52914069-52914130)
chr4 (468-513)||(54106556-54106601)
chr4 (468-513)||(54508183-54508228)
chr4 (456-516)||(1205155-1205215)
chr4 (468-516)||(2401051-2401099)
chr4 (416-500)||(3345348-3345432)
chr4 (455-519)||(5418583-5418647)
chr4 (454-498)||(5924528-5924572)
chr4 (456-528)||(20788104-20788176)
chr4 (455-527)||(28702061-28702133)
chr4 (474-526)||(31280334-31280386)
chr4 (464-516)||(46543656-46543708)
chr4 (455-527)||(56328518-56328590)
[»] chr6 (27 HSPs)
chr6 (391-527)||(11073465-11073604)
chr6 (466-514)||(3846444-3846492)
chr6 (457-529)||(8029507-8029579)
chr6 (466-526)||(11637171-11637231)
chr6 (415-519)||(14173398-14173502)
chr6 (415-519)||(14177934-14178038)
chr6 (468-534)||(33472679-33472745)
chr6 (395-485)||(33472694-33472784)
chr6 (457-518)||(18491670-18491731)
chr6 (456-532)||(3203666-3203742)
chr6 (468-500)||(12154066-12154098)
chr6 (388-496)||(16120996-16121104)
chr6 (388-495)||(10258336-10258443)
chr6 (468-519)||(15718474-15718525)
chr6 (459-518)||(30013830-30013889)
chr6 (466-528)||(8449655-8449717)
chr6 (466-528)||(8458459-8458521)
chr6 (389-519)||(12383597-12383727)
chr6 (468-513)||(8030396-8030441)
chr6 (462-519)||(29418942-29418999)
chr6 (468-532)||(3203752-3203816)
chr6 (455-527)||(6560725-6560797)
chr6 (458-514)||(8050991-8051047)
chr6 (455-527)||(8146017-8146089)
chr6 (455-527)||(15517091-15517162)
chr6 (468-532)||(16121046-16121110)
chr6 (455-527)||(34379736-34379807)
[»] scaffold0531 (1 HSPs)
scaffold0531 (457-530)||(6924-6997)
[»] scaffold0149 (1 HSPs)
scaffold0149 (458-527)||(24677-24746)
[»] scaffold0018 (1 HSPs)
scaffold0018 (458-518)||(135847-135907)


Alignment Details
Target: chr1 (Bit Score: 546; Significance: 0; HSPs: 66)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 546; E-Value: 0
Query Start/End: Original strand, 8 - 614
Target Start/End: Complemental strand, 18570223 - 18569613
Alignment:
Q  8 ttttgatgatccttggaagatcaagaaggtgctccaagaggatgatattgttgataagctattgttggacaaagatttggtagaggaattggtgttgcct 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18570223 ttttgatgatccttggaagatcaagaaggtgctccaagaggatgatattgttgataagctattgttggacaaagatttggtagaggaattggtgttgcct 18570124  T
Q  108 gtgttgagtgctggtgctgatcttgaaaaaggagctttggttaggatttttgattatgacaccgaatccatgcatgttctggttcataagagatgtgttt 207  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  18570123 gtgttgagtgctggtgctgatcttgaaagaggagctttggttaggatttttgattatgacactgaatccatgcatgttctggttcataagagatgtgttt 18570024  T
Q  208 cttcaggaaactatggtttctttgacaattggttctatgattttgttagaagaaggggattaaagaaaggagatgaaattggcttccattgggatccata 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18570023 cttcaggaaactatggtttctttgacaattggttctatgattttgttagaagaaggggattaaagaaaggagatgaaattggcttccattgggatccata 18569924  T
Q  308 tatgaaacacttcaatttctctgttctatttaggactattaggatgtagtctcatgccctagaagaattgttatgaacta----ctccggtcactattat 403  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    ||||| ||| ||||||    
T  18569923 tatgaaacacttcaatttctctgttctatttaggaccattaggatgtagtctcatgccctagaagaattgttatgaactacttcctccgatcattattat 18569824  T
Q  404 aattaaaaacttactttttagattcattgaacgattgatatatgagatcattaatatagactatatacatcatttattcaatgaatttaaaaaataattt 503  Q
    ||||||||| |||||||||||||||||||||||| |||| ||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  18569823 aattaaaaaattactttttagattcattgaacgactgatgtatgagaccattaatatagattatatacatcatttattcaatgaatttaaaaaataattt 18569724  T
Q  504 tttgcttataatagtggccggaggaagtactatattttaaggtggcattcaggagttcttgactagtagtgttttcaattttaagtggttttataataat 603  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18569723 tttgcttgtaataatggccggaggaagtactatattttaaggtggcattcaggagttcttgactagtagtgttttcaattttaagtggttttataataat 18569624  T
Q  604 cctttttaatt 614  Q
    |||||||||||    
T  18569623 cctttttaatt 18569613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 414 - 532
Target Start/End: Complemental strand, 38834724 - 38834606
Alignment:
Q  414 ttactttttagattcattgaacgattgatatatgagatcattaatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttata 513  Q
    |||||||||||||||||| ||  | |||| |||  | ||||| ||||||||||||||||||||||||| ||||||| |||||||||| ||||||||||||    
T  38834724 ttactttttagattcattcaataaatgatgtatatggtcatttatatagactatatacatcatttatttaatgaatctaaaaaataaatttttgcttata 38834625  T
Q  514 atagtggccggaggaagta 532  Q
    |||||| ||||||| ||||    
T  38834624 atagtgaccggagggagta 38834606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 388 - 532
Target Start/End: Original strand, 15057658 - 15057802
Alignment:
Q  388 ctccggtcactattataattaaaaacttactttttagattcattgaacgattgatatatgagatcattaatatagactatatacatcatttattcaatga 487  Q
    ||||| ||||||||||||  |||||  |||||||||||||||||||| || |||| |||| | |||||||||||||| | |||||| ||||||| |||||    
T  15057658 ctccgatcactattataagcaaaaaactactttttagattcattgaatgagtgatgtatgtggtcattaatatagaccacatacataatttatttaatga 15057757  T
Q  488 atttaaaaaataattttttgcttataatagtggccggaggaagta 532  Q
    |  ||| || || || ||||||||||||| || |||||| |||||    
T  15057758 acctaataagtagttgtttgcttataatactgaccggagaaagta 15057802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 414 - 516
Target Start/End: Original strand, 5246169 - 5246270
Alignment:
Q  414 ttactttttagattcattgaacgattgatatatgagatcattaatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttata 513  Q
    |||||||||| ||| |||||| |  |||| |||| | ||||||| |||||||| |||||||||||||||||||||| ||||||||| ||||||| |||||    
T  5246169 ttactttttaaatttattgaatgggtgatgtatgtggtcattaa-atagactacatacatcatttattcaatgaatctaaaaaatagttttttgtttata 5246267  T
Q  514 ata 516  Q
    |||    
T  5246268 ata 5246270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 389 - 506
Target Start/End: Complemental strand, 748787 - 748670
Alignment:
Q  389 tccggtcactattataattaaaaacttactttttagattcattgaacgattgatatatgagatcattaatatagactatatacatcatttattcaatgaa 488  Q
    |||| ||||||||||||  |||||   | ||||||||||||||||| || |||| ||||  | |||||||||||||  ||||||||||||||||||||||    
T  748787 tccgatcactattataagcaaaaaacaattttttagattcattgaatgagtgatgtatgtaaccattaatatagaccgtatacatcatttattcaatgaa 748688  T
Q  489 tttaaaaaataatttttt 506  Q
      ||||||||| ||||||    
T  748687 cctaaaaaatagtttttt 748670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 388 - 532
Target Start/End: Complemental strand, 34768417 - 34768274
Alignment:
Q  388 ctccggtcactattataattaaaaacttactttttagattcattgaacgattgatatatgagatcattaatatagactatatacatcatttattcaatga 487  Q
    ||||||||||||||||||  ||||  | ||||||||| |||||| ||| | | || |||| ||||  || |||||||||||||||||||||||| || ||    
T  34768417 ctccggtcactattataagcaaaagttgactttttaggttcattcaacaaataatgtatgtgatctata-tatagactatatacatcatttattgaaaga 34768319  T
Q  488 atttaaaaaataattttttgcttataatagtggccggaggaagta 532  Q
    ||||||||| | |  ||||||||| ||||||| ||||||| ||||    
T  34768318 atttaaaaagtgaaattttgcttacaatagtgaccggagggagta 34768274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 457 - 525
Target Start/End: Original strand, 47446701 - 47446769
Alignment:
Q  457 atatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccgga 525  Q
    |||||||||| |||||||||||||| |||||||||||||| | | ||||| |||||||||||| |||||    
T  47446701 atatagactacatacatcatttattgaatgaatttaaaaagtgagtttttacttataatagtgaccgga 47446769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 394 - 464
Target Start/End: Original strand, 39617315 - 39617385
Alignment:
Q  394 tcactattataattaaaaacttactttttagattcattgaacgattgatatatgagatcattaatatagac 464  Q
    |||||||||||| ||||||  ||||||||||||| |||||| || |||| |||| ||||||||||||||||    
T  39617315 tcactattataagtaaaaaactactttttagatttattgaatgagtgatgtatgtgatcattaatatagac 39617385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 468 - 517
Target Start/End: Complemental strand, 25554602 - 25554553
Alignment:
Q  468 atacatcatttattcaatgaatttaaaaaataattttttgcttataatag 517  Q
    |||||||||||||||||||||| |||||| | ||||||||||||||||||    
T  25554602 atacatcatttattcaatgaatctaaaaagttattttttgcttataatag 25554553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 389 - 518
Target Start/End: Original strand, 42761455 - 42761584
Alignment:
Q  389 tccggtcactattataattaaaaacttactttttagattcattgaacgattgatatatgagatcattaatatagactatatacatcatttattcaatgaa 488  Q
    |||||||| ||||||||  ||||  |||| ||||||||||||| ||  | |||| |||  |||| ||| |||||||||||||||||||||| | ||||||    
T  42761455 tccggtcattattataagcaaaactttacattttagattcattcaattaatgatgtatctgatctttattatagactatatacatcatttaatgaatgaa 42761554  T
Q  489 tttaaaaaataattttttgcttataatagt 518  Q
    |  |||| | ||  ||||||||||||||||    
T  42761555 tcaaaaataaaaagttttgcttataatagt 42761584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 388 - 532
Target Start/End: Complemental strand, 5431479 - 5431336
Alignment:
Q  388 ctccggtcactattataattaaaaacttactttttagattcattgaacgattgatatatgagatcattaatatagactatatacatcatttattcaatga 487  Q
    |||||||||||| |||||  ||||| | |||||||||||||||| ||  | |||| |||| | || |  | |||||| | |||| ||||||||| |||||    
T  5431479 ctccggtcactaatataagcaaaaattaactttttagattcattcaataaatgatgtatgtggtc-tacacatagacaacatacttcatttattgaatga 5431381  T
Q  488 atttaaaaaataattttttgcttataatagtggccggaggaagta 532  Q
    || |||||| | | |||||||||||||||||| |||||| |||||    
T  5431380 atctaaaaagtgaatttttgcttataatagtgaccggagtaagta 5431336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 419 - 527
Target Start/End: Complemental strand, 15351823 - 15351715
Alignment:
Q  419 ttttagattcattgaacgattgatatatgagatcattaatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagt 518  Q
    ||||||||||||| ||  | |||| |||| | || ||| | ||||| | |||||||||||||| ||||||||||||| |||| |||||||||||| | ||    
T  15351823 ttttagattcattcaataaatgatgtatgtggtctttattgtagacaacatacatcatttattgaatgaatttaaaatataaatttttgcttatatttgt 15351724  T
Q  519 ggccggagg 527  Q
    | |||||||    
T  15351723 gaccggagg 15351715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 457 - 533
Target Start/End: Original strand, 19580263 - 19580339
Alignment:
Q  457 atatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggaggaagtac 533  Q
    ||||| |||| |||||||||||||| ||||||| |||||||||   ||||| ||||||||||| ||||||| |||||    
T  19580263 atatacactacatacatcatttattgaatgaatctaaaaaatatacttttgtttataatagtgaccggagggagtac 19580339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 455 - 519
Target Start/End: Original strand, 34953964 - 34954028
Alignment:
Q  455 taatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtg 519  Q
    ||||| |||| |||||||||||| ||| ||||||| ||||| |||| ||||||||||||||||||    
T  34953964 taataaagaccatatacatcattaattgaatgaatctaaaatataaatttttgcttataatagtg 34954028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 468 - 527
Target Start/End: Original strand, 14214610 - 14214669
Alignment:
Q  468 atacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggagg 527  Q
    |||||||||||||| ||||||  |||||| ||| |||||||||||||||||| |||||||    
T  14214610 atacatcatttattgaatgaacctaaaaagtaagtttttgcttataatagtgaccggagg 14214669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 468 - 535
Target Start/End: Complemental strand, 15057716 - 15057649
Alignment:
Q  468 atacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggaggaagtacta 535  Q
    |||||||| | ||||||||||| |||||| || |||||||||||||||||||  ||||||||| ||||    
T  15057716 atacatcactcattcaatgaatctaaaaagtagttttttgcttataatagtgatcggaggaagcacta 15057649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 388 - 519
Target Start/End: Complemental strand, 34954035 - 34953904
Alignment:
Q  388 ctccggtcactattataattaaaaacttactttttagattcattgaacgattgatatatgagatcattaatatagactatatacatcatttattcaatga 487  Q
    ||||| ||||||||||||  ||||| |||  ||||||||||||| ||  | |||| |||  | || ||| ||||||| | |||||||||||| | |||||    
T  34954035 ctccgatcactattataagcaaaaatttatattttagattcattcaattaatgatgtatatggtctttattatagaccacatacatcatttaatgaatga 34953936  T
Q  488 atttaaaaaataattttttgcttataatagtg 519  Q
    |||||||| ||   ||||||||||||||||||    
T  34953935 atttaaaatattgatttttgcttataatagtg 34953904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 393 - 519
Target Start/End: Original strand, 8243365 - 8243491
Alignment:
Q  393 gtcactattataattaaaaacttactttttagattcattgaacgattgatatatgagatcattaatatagactatatacatcatttattcaatgaattta 492  Q
    |||| |||||||| |||||| |||| |||| | |||||| ||  | ||||||||  ||||  ||||| |||| | |||||||||||||||||| || |||    
T  8243365 gtcattattataaataaaaatttacatttttggttcatttaataagtgatatatatgatctataatacagacaacatacatcatttattcaataaactta 8243464  T
Q  493 aaaaataattttttgcttataatagtg 519  Q
    ||||||||  || | ||||||||||||    
T  8243465 aaaaataaaattctacttataatagtg 8243491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 393 - 519
Target Start/End: Original strand, 20423148 - 20423274
Alignment:
Q  393 gtcactattataattaaaaacttactttttagattcattgaacgattgatatatgagatcattaatatagactatatacatcatttattcaatgaattta 492  Q
    ||||||||||||| ||| ||||||||||| |  ||  ||||   |||||| |||  ||||  || ||||||||  ||||||||||||||||||||||| |    
T  20423148 gtcactattataagtaataacttacttttcaagtttcttgagtaattgatgtatctgatctatattatagactggatacatcatttattcaatgaattca 20423247  T
Q  493 aaaaataattttttgcttataatagtg 519  Q
    |||||   |||||||||||||| ||||    
T  20423248 aaaaaattttttttgcttataacagtg 20423274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 460 - 522
Target Start/End: Complemental strand, 26158775 - 26158713
Alignment:
Q  460 tagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggcc 522  Q
    ||||||| ||||||||||| || |||||| ||||||| | | |||||||||||||||||||||    
T  26158775 tagactaaatacatcatttgttgaatgaacttaaaaagttaatttttgcttataatagtggcc 26158713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 460 - 522
Target Start/End: Complemental strand, 26172073 - 26172011
Alignment:
Q  460 tagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggcc 522  Q
    ||||||| ||||||||||| || |||||| ||||||| | | |||||||||||||||||||||    
T  26172073 tagactaaatacatcatttgttgaatgaacttaaaaagttaatttttgcttataatagtggcc 26172011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 456 - 506
Target Start/End: Complemental strand, 29064224 - 29064174
Alignment:
Q  456 aatatagactatatacatcatttattcaatgaatttaaaaaataatttttt 506  Q
    |||||||| || ||||||||||||| |||||||| ||||||||||||||||    
T  29064224 aatatagattaaatacatcatttatacaatgaatctaaaaaataatttttt 29064174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 457 - 519
Target Start/End: Original strand, 39940556 - 39940618
Alignment:
Q  457 atatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtg 519  Q
    |||||||||| |||||| ||||||| ||||||| |||||| ||| ||||| ||||||||||||    
T  39940556 atatagactacatacattatttattgaatgaatctaaaaagtaaatttttacttataatagtg 39940618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 457 - 519
Target Start/End: Original strand, 42660425 - 42660487
Alignment:
Q  457 atatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtg 519  Q
    |||||||| | |||||||||||||| ||||| |||||||||| |  |||||||||||||||||    
T  42660425 atatagaccacatacatcatttattgaatgattttaaaaaatgaacttttgcttataatagtg 42660487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 458 - 519
Target Start/End: Original strand, 3906832 - 3906893
Alignment:
Q  458 tatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtg 519  Q
    |||| |||| ||||| |||||||| ||||||| |||||||||| |||||| |||||||||||    
T  3906832 tatatactacatacaccatttattaaatgaatctaaaaaataaatttttgtttataatagtg 3906893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 455 - 528
Target Start/End: Complemental strand, 6758618 - 6758545
Alignment:
Q  455 taatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggagga 528  Q
    ||||| ||||||||||||||||| ||| ||||||| |||||   ||  ||||||||||||||||| ||||||||    
T  6758618 taataaagactatatacatcattaattgaatgaatgtaaaatgcaaagttttgcttataatagtgaccggagga 6758545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 388 - 533
Target Start/End: Original strand, 9675967 - 9676112
Alignment:
Q  388 ctccggtcactattataattaaaaacttactttttagattcattgaacgattgatatatgagatcattaatatagactatatacatcatttattcaatga 487  Q
    |||||||||||||||||| |||||| | ||||||||| |||||| ||  | | || |||    ||| | |||||||||| |||||||||||||  |||||    
T  9675967 ctccggtcactattataagtaaaaattaactttttaggttcatttaataaataatgtatttagtcaattatatagactaaatacatcatttatcaaatga 9676066  T
Q  488 atttaaaaaataattttttgcttataatagtggccggaggaagtac 533  Q
    || ||| ||||   ||||| |||||||||||| ||| ||| |||||    
T  9676067 atctaagaaattgatttttacttataatagtgaccgaagggagtac 9676112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 458 - 519
Target Start/End: Original strand, 20273191 - 20273252
Alignment:
Q  458 tatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtg 519  Q
    ||||||||  ||||||||||||||||||||||| ||||| |  |||||||||||||| ||||    
T  20273191 tatagactggatacatcatttattcaatgaattaaaaaagttgttttttgcttataacagtg 20273252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 460 - 513
Target Start/End: Complemental strand, 26937928 - 26937875
Alignment:
Q  460 tagactatatacatcatttattcaatgaatttaaaaaataattttttgcttata 513  Q
    ||||| |||||||||||||||| ||||||||||||| || | ||||||||||||    
T  26937928 tagacaatatacatcatttattgaatgaatttaaaatatgaatttttgcttata 26937875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 468 - 532
Target Start/End: Original strand, 748730 - 748794
Alignment:
Q  468 atacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggaggaagta 532  Q
    |||||||| | ||||||||||| ||||||||  |||||||||||||||||||  |||| ||||||    
T  748730 atacatcactcattcaatgaatctaaaaaattgttttttgcttataatagtgatcggatgaagta 748794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 468 - 527
Target Start/End: Original strand, 1409130 - 1409189
Alignment:
Q  468 atacatcatttattcaatgaatttaaaaa-ataattttttgcttataatagtggccggagg 527  Q
    |||||||||||||| ||||||| |||||| |||| |||||||||||||||||| |||||||    
T  1409130 atacatcatttattgaatgaatctaaaaagataa-tttttgcttataatagtgaccggagg 1409189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 419 - 495
Target Start/End: Complemental strand, 20621338 - 20621262
Alignment:
Q  419 ttttagattcattgaacgattgatatatgagatcattaatatagactatatacatcatttattcaatgaatttaaaa 495  Q
    ||||||||||||||||  |  |||||||| |||||||| ||||||| | ||||||| |||||| ||||||| |||||    
T  20621338 ttttagattcattgaattaacgatatatgtgatcattattatagaccacatacatcgtttattgaatgaatctaaaa 20621262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 463 - 527
Target Start/End: Complemental strand, 23398483 - 23398419
Alignment:
Q  463 actatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggagg 527  Q
    ||||||||||||||||| | ||||||| |||||  | | |||||||||||||||||| |||||||    
T  23398483 actatatacatcatttaatgaatgaatctaaaatgttagtttttgcttataatagtgaccggagg 23398419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 455 - 527
Target Start/End: Complemental strand, 27206831 - 27206759
Alignment:
Q  455 taatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggagg 527  Q
    ||||| |||||| |||||||||| ||| |||| || |||||| |  ||||||||||||| |||||||||||||    
T  27206831 taataaagactacatacatcattaattgaatgtatctaaaaagtggttttttgcttatattagtggccggagg 27206759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 457 - 529
Target Start/End: Original strand, 42915716 - 42915788
Alignment:
Q  457 atatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggaggaa 529  Q
    |||||||| | ||| |||||||||| |||||| ||||||| |  ||||||||||||||||||| || ||||||    
T  42915716 atatagaccacatatatcatttatttaatgaacttaaaaagtgtttttttgcttataatagtgaccagaggaa 42915788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 468 - 516
Target Start/End: Complemental strand, 48781397 - 48781349
Alignment:
Q  468 atacatcatttattcaatgaatttaaaaaataattttttgcttataata 516  Q
    |||||||| |||||| |||||| ||||||||||| ||||||||||||||    
T  48781397 atacatcaattattctatgaatctaaaaaataatgttttgcttataata 48781349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 388 - 431
Target Start/End: Complemental strand, 14214668 - 14214625
Alignment:
Q  388 ctccggtcactattataattaaaaacttactttttagattcatt 431  Q
    ||||||||||||||||||  ||||||||||||||||| ||||||    
T  14214668 ctccggtcactattataagcaaaaacttactttttaggttcatt 14214625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 455 - 526
Target Start/End: Original strand, 14891806 - 14891877
Alignment:
Q  455 taatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggag 526  Q
    ||||| |||| ||||||||||||||||  || ||| |||||  ||| |||||||||||||||||| ||||||    
T  14891806 taataaagaccatatacatcatttattggataaatctaaaatttaaatttttgcttataatagtgaccggag 14891877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 468 - 519
Target Start/End: Original strand, 19175669 - 19175720
Alignment:
Q  468 atacatcatttattcaatgaatttaaaaaataattttttgcttataatagtg 519  Q
    |||||||||||||| ||||||| |||||| ||  ||||||||||||||||||    
T  19175669 atacatcatttattgaatgaatctaaaaagtagatttttgcttataatagtg 19175720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 388 - 431
Target Start/End: Complemental strand, 39940625 - 39940582
Alignment:
Q  388 ctccggtcactattataattaaaaacttactttttagattcatt 431  Q
    ||||| |||||||||||| |||||| ||||||||||||||||||    
T  39940625 ctccgatcactattataagtaaaaatttactttttagattcatt 39940582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 467 - 518
Target Start/End: Complemental strand, 42660417 - 42660366
Alignment:
Q  467 tatacatcatttattcaatgaatttaaaaaataattttttgcttataatagt 518  Q
    ||||||||||||||| ||||||| |||||||| |  ||||||||||||||||    
T  42660417 tatacatcatttattgaatgaatctaaaaaatcaacttttgcttataatagt 42660366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 468 - 526
Target Start/End: Original strand, 5431421 - 5431479
Alignment:
Q  468 atacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggag 526  Q
    |||||||||||||| ||||||| |||||| | | |||||||||||| ||||| ||||||    
T  5431421 atacatcatttattgaatgaatctaaaaagttaatttttgcttatattagtgaccggag 5431479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 457 - 519
Target Start/End: Complemental strand, 10256851 - 10256789
Alignment:
Q  457 atatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtg 519  Q
    |||||||| | |||||||||||||| ||||||| |||||| | | ||||| ||||||||||||    
T  10256851 atatagaccacatacatcatttattgaatgaatctaaaaagtgaattttttcttataatagtg 10256789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 455 - 525
Target Start/End: Complemental strand, 33765859 - 33765789
Alignment:
Q  455 taatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccgga 525  Q
    ||||| |||| |||||||||||| ||| || |||||||||| |||| ||||| |||||||| ||| |||||    
T  33765859 taataaagaccatatacatcattaattaaacgaatttaaaatataaatttttacttataatcgtgaccgga 33765789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 457 - 519
Target Start/End: Original strand, 39393042 - 39393104
Alignment:
Q  457 atatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtg 519  Q
    |||| ||| ||||| || ||||||| ||||||| ||||||||||||  |||||||||||||||    
T  39393042 atatggaccatatatattatttattgaatgaatctaaaaaataattagttgcttataatagtg 39393104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 452 - 518
Target Start/End: Complemental strand, 39619267 - 39619201
Alignment:
Q  452 cattaatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagt 518  Q
    ||||| ||||||||| | |||||||||||||||| ||| |||||| |  ||||||||||| ||||||    
T  39619267 cattattatagactagacacatcatttattcaataaatctaaaaagtttttttttgcttacaatagt 39619201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 468 - 526
Target Start/End: Complemental strand, 46906920 - 46906862
Alignment:
Q  468 atacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggag 526  Q
    |||||||||||| | ||||||| ||||| |||  |||||||||||||||||| ||||||    
T  46906920 atacatcatttaatgaatgaatctaaaatatagatttttgcttataatagtgaccggag 46906862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 389 - 431
Target Start/End: Complemental strand, 47446769 - 47446727
Alignment:
Q  389 tccggtcactattataattaaaaacttactttttagattcatt 431  Q
    ||||||||||||||||| |||||||| |||||||| |||||||    
T  47446769 tccggtcactattataagtaaaaactcactttttaaattcatt 47446727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 457 - 519
Target Start/End: Complemental strand, 52112946 - 52112884
Alignment:
Q  457 atatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtg 519  Q
    |||||||| | |||||||||||||| ||||||| |||||| | |  |||||||||||||||||    
T  52112946 atatagaccacatacatcatttattgaatgaatataaaaagtgaacttttgcttataatagtg 52112884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 466 - 527
Target Start/End: Original strand, 3013689 - 3013750
Alignment:
Q  466 atatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggagg 527  Q
    |||||||||||||| | ||||||| |||||  | | |||||||||||||||||| |||||||    
T  3013689 atatacatcatttaatgaatgaatgtaaaatgttaatttttgcttataatagtgaccggagg 3013750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 386 - 431
Target Start/End: Original strand, 5431340 - 5431385
Alignment:
Q  386 tactccggtcactattataattaaaaacttactttttagattcatt 431  Q
    ||||||||||||||||||||  ||||| | ||||||||||||||||    
T  5431340 tactccggtcactattataagcaaaaattcactttttagattcatt 5431385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 455 - 496
Target Start/End: Complemental strand, 19771217 - 19771176
Alignment:
Q  455 taatatagactatatacatcatttattcaatgaatttaaaaa 496  Q
    |||||||||| ||||||| |||||||| ||||||||||||||    
T  19771217 taatatagaccatatacaacatttattgaatgaatttaaaaa 19771176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 458 - 519
Target Start/End: Original strand, 27936742 - 27936803
Alignment:
Q  458 tatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtg 519  Q
    ||||||||| |||| ||||||| | ||||||| ||||||  ||||||||||||||| |||||    
T  27936742 tatagactacatacgtcatttaataaatgaatctaaaaatcaattttttgcttatattagtg 27936803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 458 - 527
Target Start/End: Original strand, 29302136 - 29302205
Alignment:
Q  458 tatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggagg 527  Q
    ||||||||| |||| ||||||| | ||||||| ||||||  || |||||||||||| ||||| |||||||    
T  29302136 tatagactacatacgtcatttaatgaatgaatctaaaaatcaaatttttgcttatattagtgaccggagg 29302205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 416 - 497
Target Start/End: Complemental strand, 50155413 - 50155332
Alignment:
Q  416 actttttagattcattgaacgattgatatatgagatcattaatatagactatatacatcatttattcaatgaatttaaaaaa 497  Q
    ||||||||||||||||||   |||||| |||  | ||  |||||||||| | ||||||||||||| ||||||||| ||||||    
T  50155413 actttttagattcattgagtaattgatgtatttggtctataatatagaccaaatacatcatttatgcaatgaattaaaaaaa 50155332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 455 - 519
Target Start/End: Complemental strand, 3013682 - 3013618
Alignment:
Q  455 taatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtg 519  Q
    ||||| |||| | ||||| |||| ||| ||| ||| ||||| |||||||||||||||||||||||    
T  3013682 taataaagaccacatacaacattaattgaataaatctaaaatataattttttgcttataatagtg 3013618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 396 - 516
Target Start/End: Original strand, 3549788 - 3549908
Alignment:
Q  396 actattataattaaaaacttactttttagattcattgaacgattgatatatgagatcattaatatagactatatacatcatttattcaatgaatttaaaa 495  Q
    ||||||||||  |||||  ||| ||||||||||||| ||  | ||||||||  | || ||| ||||||| | |||||| ||||| | |||||||||||||    
T  3549788 actattataagcaaaaatctacattttagattcattcaattaatgatatatacggtctttattatagaccacatacattatttaatgaatgaatttaaaa 3549887  T
Q  496 aataattttttgcttataata 516  Q
      | | |||||||||||||||    
T  3549888 tgttaatttttgcttataata 3549908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 468 - 512
Target Start/End: Complemental strand, 8984247 - 8984203
Alignment:
Q  468 atacatcatttattcaatgaatttaaaaaataattttttgcttat 512  Q
    |||||||||||||| ||||||| ||||| || |||||||||||||    
T  8984247 atacatcatttattgaatgaatctaaaacatgattttttgcttat 8984203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 418 - 518
Target Start/End: Complemental strand, 9002838 - 9002738
Alignment:
Q  418 tttttagattcattgaacgattgatatatgagatcattaatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatag 517  Q
    |||||||||||||| ||  | |||| |||| |||| ||| | ||||| | |||||||||||||| |||| || ||||| |||  |||||||||||| |||    
T  9002838 tttttagattcatttaataaatgatgtatgtgatctttattgtagacaacatacatcatttattgaatgcatctaaaatatacatttttgcttatactag 9002739  T
Q  518 t 518  Q
    |    
T  9002738 t 9002738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 468 - 519
Target Start/End: Complemental strand, 10015174 - 10015122
Alignment:
Q  468 atacatcatttattcaatgaatttaaaaa-ataattttttgcttataatagtg 519  Q
    ||||||||||||||||||||||| |||||  || |||||||||||||| ||||    
T  10015174 atacatcatttattcaatgaattcaaaaagttatttttttgcttataacagtg 10015122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 464 - 532
Target Start/End: Original strand, 10256846 - 10256913
Alignment:
Q  464 ctatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggaggaagta 532  Q
    |||||||||||||||||| |||||| ||||||  ||| ||||| ||||||||||||  |||||| ||||    
T  10256846 ctatatacatcatttattgaatgaacttaaaagttaaattttt-cttataatagtgatcggagggagta 10256913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 472 - 532
Target Start/End: Original strand, 13319904 - 13319964
Alignment:
Q  472 atcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggaggaagta 532  Q
    |||||||||| ||| | |||||||| ||| |||||||||||||||||| | ||||| ||||    
T  13319904 atcatttattaaataattttaaaaagtaaatttttgcttataatagtgactggagggagta 13319964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 468 - 532
Target Start/End: Complemental strand, 19580243 - 19580179
Alignment:
Q  468 atacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggaggaagta 532  Q
    |||||||||||||| ||||||||| |||| | | |||||||||||||| |||  |||||| ||||    
T  19580243 atacatcatttattgaatgaattttaaaagtcaatttttgcttataatcgtgatcggagggagta 19580179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 455 - 519
Target Start/End: Complemental strand, 26344292 - 26344228
Alignment:
Q  455 taatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtg 519  Q
    ||||| ||||||||||||| ||| ||| ||| ||||||||| |||  ||||| ||||||||||||    
T  26344292 taataaagactatatacattattaattaaataaatttaaaatatatattttttcttataatagtg 26344228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 482 - 514
Target Start/End: Complemental strand, 42074178 - 42074146
Alignment:
Q  482 caatgaatttaaaaaataattttttgcttataa 514  Q
    ||||||||||||||| |||||||||||||||||    
T  42074178 caatgaatttaaaaagtaattttttgcttataa 42074146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 455 - 515
Target Start/End: Original strand, 43318076 - 43318136
Alignment:
Q  455 taatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataat 515  Q
    |||||||||| || || |||||||||| ||||||| |||||||| | || |||||||||||    
T  43318076 taatatagaccatgtatatcatttattaaatgaatctaaaaaatgaattcttgcttataat 43318136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 72; Significance: 2e-32; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 388 - 532
Target Start/End: Complemental strand, 39964436 - 39964290
Alignment:
Q  388 ctccggtcactattataattaaaaact--tactttttagattcattgaacgattgatatatgagatcattaatatagactatatacatcatttattcaat 485  Q
    |||||||||||||||||| ||||||||  | |||||||  |||||||||||| |||| |||| || ||||||||||||||| |||||| |||||||||||    
T  39964436 ctccggtcactattataagtaaaaactagtgctttttatgttcattgaacgagtgatgtatgtgaccattaatatagactacatacataatttattcaat 39964337  T
Q  486 gaatttaaaaaataattttttgcttataatagtggccggaggaagta 532  Q
    |||| |||||| || |||||||||||||||| || ||||||| ||||    
T  39964336 gaatctaaaaagtagttttttgcttataataatgaccggagggagta 39964290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 388 - 519
Target Start/End: Complemental strand, 39682748 - 39682617
Alignment:
Q  388 ctccggtcactattataattaaaaacttactttttagattcattgaacgattgatatatgagatcattaatatagactatatacatcatttattcaatga 487  Q
    ||||||||| |||||||| ||||||  || ||||||| ||||||||| || || | |||| || ||||||||||||| | ||||||||||||||||||||    
T  39682748 ctccggtcattattataaataaaaaactattttttaggttcattgaaagagtgttgtatgtgaccattaatatagaccacatacatcatttattcaatga 39682649  T
Q  488 atttaaaaaataattttttgcttataatagtg 519  Q
    |  |||||||||||||||| ||||||||||||    
T  39682648 acctaaaaaataattttttacttataatagtg 39682617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 415 - 532
Target Start/End: Complemental strand, 27161557 - 27161440
Alignment:
Q  415 tactttttagattcattgaacgattgatatatgagatcattaatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataa 514  Q
    |||||||||| || |||||| || ||||  ||| | |||||||||| ||  | ||||||||||||||| |||||  ||||||||||||||||| ||||||    
T  27161557 tactttttaggttaattgaatgagtgatgaatgtggtcattaatatggatcacatacatcatttattctatgaacctaaaaaataattttttgtttataa 27161458  T
Q  515 tagtggccggaggaagta 532  Q
    || || ||||||||||||    
T  27161457 taatgaccggaggaagta 27161440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 455 - 527
Target Start/End: Original strand, 10872740 - 10872812
Alignment:
Q  455 taatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggagg 527  Q
    ||||| |||| |||||||||||| ||| ||||||| ||||| |||| |||||||||||||||||| |||||||    
T  10872740 taataaagaccatatacatcattaattgaatgaatctaaaatataaatttttgcttataatagtgaccggagg 10872812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 388 - 527
Target Start/End: Original strand, 29720077 - 29720216
Alignment:
Q  388 ctccggtcactattataattaaaaacttactttttagattcattgaacgattgatatatgagatcat-taatatagactatatacatcatttattcaatg 486  Q
    |||||||||||| |||||| |||||   ||||||||||| |||| ||  ||||||||||| || ||| ||||| |||| | |||||||||| ||| ||||    
T  29720077 ctccggtcactaatataatcaaaaatccactttttagatgcattcaattattgatatatgtga-catataataaagaccacatacatcattaattaaatg 29720175  T
Q  487 aatttaaaaaataattttttgcttataatagtggccggagg 527  Q
     ||||||||| | | |||||||||||| ||||| |||||||    
T  29720176 tatttaaaaagtgaatttttgcttatattagtgaccggagg 29720216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 388 - 519
Target Start/End: Original strand, 12744902 - 12745033
Alignment:
Q  388 ctccggtcactattataattaaaaacttactttttagattcattgaacgattgatatatgagatcattaatatagactatatacatcatttattcaatga 487  Q
    ||||||||||||||||||  |||||||||| ||||||||||||| ||  | |||| |||  | || ||| ||||||| | |||||||||||| | ||||     
T  12744902 ctccggtcactattataagcaaaaacttacattttagattcattcaattaatgatgtatatggtctttattatagaccacatacatcatttaatgaatgt 12745001  T
Q  488 atttaaaaaataattttttgcttataatagtg 519  Q
    || |||||  | | ||||||||||||||||||    
T  12745002 atctaaaatgttaatttttgcttataatagtg 12745033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 391 - 516
Target Start/End: Original strand, 24596895 - 24597020
Alignment:
Q  391 cggtcactattataattaaaaacttactttttagattcattgaacgattgatatatgagatcattaatatagactatatacatcatttattcaatgaatt 490  Q
    |||||| |||||||| |||||| |||| ||||||||||||| ||  |  ||| |||| |||   |||| |||| ||||||||| |||||||||||||| |    
T  24596895 cggtcattattataagtaaaaatttacattttagattcattcaataaacgatgtatgtgatttataatgtagattatatacattatttattcaatgaact 24596994  T
Q  491 taaaaaataattttttgcttataata 516  Q
    ||||| || | ||||| |||||||||    
T  24596995 taaaatatgaattttttcttataata 24597020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 455 - 519
Target Start/End: Original strand, 3648767 - 3648831
Alignment:
Q  455 taatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtg 519  Q
    ||||| ||||||||||||||||| ||| ||||||| ||||| ||||  |||||||||||||||||    
T  3648767 taataaagactatatacatcattgattgaatgaatgtaaaatataaagttttgcttataatagtg 3648831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 455 - 527
Target Start/End: Complemental strand, 12744973 - 12744901
Alignment:
Q  455 taatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggagg 527  Q
    ||||| |||| |||||||||||| ||| ||||||| |||||  ||| |||||||||||||||||| |||||||    
T  12744973 taataaagaccatatacatcattaattgaatgaatctaaaatgtaagtttttgcttataatagtgaccggagg 12744901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 466 - 518
Target Start/End: Complemental strand, 54690885 - 54690833
Alignment:
Q  466 atatacatcatttattcaatgaatttaaaaaataattttttgcttataatagt 518  Q
    |||||||||||||| | ||||||| |||||||||||||||| |||||||||||    
T  54690885 atatacatcatttaatgaatgaatctaaaaaataatttttttcttataatagt 54690833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 457 - 532
Target Start/End: Complemental strand, 4190699 - 4190624
Alignment:
Q  457 atatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggaggaagta 532  Q
    |||||| ||| |||||| ||||||| ||||||  |||||||| | ||||| |||||||||||| ||||||||||||    
T  4190699 atataggctacatacataatttattgaatgaaactaaaaaatgaattttttcttataatagtgaccggaggaagta 4190624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 468 - 519
Target Start/End: Original strand, 34365123 - 34365174
Alignment:
Q  468 atacatcatttattcaatgaatttaaaaaataattttttgcttataatagtg 519  Q
    |||||||||||||  ||| ||| |||||||||||||||||||||||||||||    
T  34365123 atacatcatttatcgaattaatctaaaaaataattttttgcttataatagtg 34365174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 457 - 532
Target Start/End: Complemental strand, 36571445 - 36571370
Alignment:
Q  457 atatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggaggaagta 532  Q
    |||||||||| |||||||||||||| ||| ||| ||||||| ||  ||||||||||||||||| ||| | ||||||    
T  36571445 atatagactacatacatcatttattgaataaatctaaaaaagaaacttttgcttataatagtgaccgaatgaagta 36571370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 468 - 519
Target Start/End: Original strand, 50603594 - 50603645
Alignment:
Q  468 atacatcatttattcaatgaatttaaaaaataattttttgcttataatagtg 519  Q
    |||||||||||||| |||||| ||||||||||  ||||||||||||||||||    
T  50603594 atacatcatttattgaatgaacttaaaaaatagatttttgcttataatagtg 50603645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 457 - 519
Target Start/End: Original strand, 2128431 - 2128493
Alignment:
Q  457 atatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtg 519  Q
    |||||||| | |||||||||||||| ||||||| ||||| || | ||||||||||||||||||    
T  2128431 atatagaccacatacatcatttattgaatgaatctaaaacatgaatttttgcttataatagtg 2128493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 458 - 532
Target Start/End: Complemental strand, 8036605 - 8036531
Alignment:
Q  458 tatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggaggaagta 532  Q
    |||| |||| |||||||| ||||||||||||  |||||||||| | |||||||||||||||| ||| ||| ||||    
T  8036605 tataaactaaatacatcagttattcaatgaacctaaaaaataaatatttgcttataatagtgaccgaagggagta 8036531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 455 - 527
Target Start/End: Original strand, 331866 - 331938
Alignment:
Q  455 taatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggagg 527  Q
    ||||| ||| ||||||||||||||| | ||||||| |||||  | | |||||||||||||||||| |||||||    
T  331866 taataaagattatatacatcatttaatgaatgaatctaaaatgttaatttttgcttataatagtgaccggagg 331938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 463 - 527
Target Start/End: Complemental strand, 7882345 - 7882281
Alignment:
Q  463 actatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggagg 527  Q
    ||||||||||||||||| | ||||||| |||||  | | |||||||||||||||||| |||||||    
T  7882345 actatatacatcatttaattaatgaatctaaaatgttaatttttgcttataatagtgaccggagg 7882281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 459 - 527
Target Start/End: Original strand, 40639781 - 40639849
Alignment:
Q  459 atagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggagg 527  Q
    |||||| | |||||||||||| | |||||||||||||  | | |||||||||||||||||| |||||||    
T  40639781 atagaccacatacatcatttaatgaatgaatttaaaatgttaatttttgcttataatagtgaccggagg 40639849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 468 - 511
Target Start/End: Original strand, 11041620 - 11041663
Alignment:
Q  468 atacatcatttattcaatgaatttaaaaaataattttttgctta 511  Q
    |||||||||||||||| |||||||||||| | ||||||||||||    
T  11041620 atacatcatttattcagtgaatttaaaaagtgattttttgctta 11041663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 416 - 495
Target Start/End: Original strand, 29290811 - 29290890
Alignment:
Q  416 actttttagattcattgaacgattgatatatgagatcattaatatagactatatacatcatttattcaatgaatttaaaa 495  Q
    |||||||||||||||||||| | |||| |||  ||||  || ||||||||| |||||| | |||||||||||||| ||||    
T  29290811 actttttagattcattgaacaactgatgtatctgatctatattatagactaaatacataagttattcaatgaattaaaaa 29290890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 468 - 527
Target Start/End: Complemental strand, 54273458 - 54273399
Alignment:
Q  468 atacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggagg 527  Q
    ||||||||||||||||||||| ||||||  | |  ||||||||||||||||| |||||||    
T  54273458 atacatcatttattcaatgaacttaaaactttaacttttgcttataatagtgaccggagg 54273399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 457 - 519
Target Start/End: Complemental strand, 611652 - 611590
Alignment:
Q  457 atatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtg 519  Q
    |||||||||| |||||||||||||| ||| ||| ||||||| ||  |||| ||||||||||||    
T  611652 atatagactacatacatcatttattgaattaatctaaaaaacaaacttttacttataatagtg 611590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 468 - 526
Target Start/End: Original strand, 2313002 - 2313060
Alignment:
Q  468 atacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggag 526  Q
    |||||||| ||||||||||||||| |||||| | | |||| ||||||||||| ||||||    
T  2313002 atacatcaattattcaatgaatttgaaaaatgaatatttgattataatagtgaccggag 2313060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 469 - 527
Target Start/End: Complemental strand, 9170170 - 9170112
Alignment:
Q  469 tacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggagg 527  Q
    |||||||||||   ||||||| |||||  |||||||||||||||||||||| |||||||    
T  9170170 tacatcatttaacgaatgaatctaaaatgtaattttttgcttataatagtgaccggagg 9170112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 419 - 513
Target Start/End: Complemental strand, 27707286 - 27707192
Alignment:
Q  419 ttttagattcattgaacgattgatatatgagatcattaatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttata 513  Q
    ||||||||||||| ||  | |||| |||| | || ||| | ||||| ||||| |||||||||| ||||||||||||| || | ||||||||||||    
T  27707286 ttttagattcattcaataaatgatgtatgtggtctttattgtagacaatatatatcatttattgaatgaatttaaaatatgaatttttgcttata 27707192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 392 - 518
Target Start/End: Complemental strand, 41743725 - 41743599
Alignment:
Q  392 ggtcactattataattaaaaacttactttttagattcattgaacgattgatatatgagatcattaatatagactatatacatcatttattcaatgaattt 491  Q
    |||||||||||||| |||||  |||| |||| |||||||| |   | |||| |||  | || ||| ||||||| |||||||||||||| | || |||| |    
T  41743725 ggtcactattataagtaaaagtttacattttggattcattcagttaatgatgtatatggtctttattatagaccatatacatcatttaatgaacgaatct 41743626  T
Q  492 aaaaaataattttttgcttataatagt 518  Q
    |||| || | |||||||||||||||||    
T  41743625 aaaatattaatttttgcttataatagt 41743599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 469 - 519
Target Start/End: Original strand, 45736769 - 45736819
Alignment:
Q  469 tacatcatttattcaatgaatttaaaaaataattttttgcttataatagtg 519  Q
    ||||||||| ||| ||||||||||||| ||||  |||||||||||||||||    
T  45736769 tacatcattaattgaatgaatttaaaatataaaattttgcttataatagtg 45736819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 468 - 525
Target Start/End: Complemental strand, 105431 - 105374
Alignment:
Q  468 atacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccgga 525  Q
    |||||||||||||||||||||| |||||| | | |||||| ||| ||||||| |||||    
T  105431 atacatcatttattcaatgaatctaaaaagtgaatttttgtttacaatagtgaccgga 105374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 516
Target Start/End: Complemental strand, 334801 - 334676
Alignment:
Q  391 cggtcactattataattaaaaacttactttttagattcattgaacgattgatatatgagatcattaatatagactatatacatcatttattcaatgaatt 490  Q
    |||||||||||||||  ||||  |||| ||| ||||||||||||  | |||| ||||   || ||| ||||||| ||||| |||||||||| ||| ||||    
T  334801 cggtcactattataagaaaaattttacctttaagattcattgaattaatgatgtatgtagtctttattatagaccatatatatcatttattgaattaatt 334702  T
Q  491 taaaaaataattttttgcttataata 516  Q
    ||||| ||    ||||||||||||||    
T  334701 taaaatatggggttttgcttataata 334676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 455 - 512
Target Start/End: Original strand, 4980341 - 4980398
Alignment:
Q  455 taatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttat 512  Q
    ||||| |||||| |||||||||||||| ||||||| ||||| || | |||||||||||    
T  4980341 taataaagactacatacatcatttattgaatgaatctaaaatatgaatttttgcttat 4980398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 458 - 519
Target Start/End: Complemental strand, 24722756 - 24722695
Alignment:
Q  458 tatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtg 519  Q
    ||||||| | |||||||||||| | ||||||| ||||| || | ||||||||||||||||||    
T  24722756 tatagaccacatacatcatttaataaatgaatctaaaatattaatttttgcttataatagtg 24722695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 466 - 519
Target Start/End: Complemental strand, 29389388 - 29389335
Alignment:
Q  466 atatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtg 519  Q
    |||||||||||| ||| || |||| ||||| |||| ||||||||||||||||||    
T  29389388 atatacatcattaattgaacgaatctaaaatataaatttttgcttataatagtg 29389335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 468 - 525
Target Start/End: Original strand, 36270070 - 36270127
Alignment:
Q  468 atacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccgga 525  Q
    ||||| || ||||||||||||  ||||||||  ||||||||||||||||||| |||||    
T  36270070 atacaccagttattcaatgaacataaaaaatggttttttgcttataatagtgaccgga 36270127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 519
Target Start/End: Original strand, 36344377 - 36344506
Alignment:
Q  391 cggtcactattataattaaaaacttactttttagattcattgaacgattgatatatgagatcattaatatagactatatacatcatttattcaatgaatt 490  Q
    |||||| |||||||| |||||   ||||||||||||||| | |   | ||||||||| ||||| ||||| |||| | |||||||||||| | |||||||     
T  36344377 cggtcattattataaataaaactctactttttagattcaatcattaaatgatatatgtgatcaataataaagaccacatacatcatttaatgaatgaatc 36344476  T
Q  491 taaaa-aataattttttgcttataatagtg 519  Q
    ||||| |  || ||||| ||||||||||||    
T  36344477 taaaatacaaaatttttacttataatagtg 36344506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 455 - 516
Target Start/End: Original strand, 40169068 - 40169129
Alignment:
Q  455 taatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataata 516  Q
    ||||| |||||| |||||| ||| ||| |||||| ||||||||| | |||||||||||||||    
T  40169068 taatacagactaaatacattattaattgaatgaacttaaaaaattaatttttgcttataata 40169129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 467 - 532
Target Start/End: Original strand, 50335001 - 50335065
Alignment:
Q  467 tatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggaggaagta 532  Q
    ||||||| | |||||||||  || |||||||||| |||| ||||||||||||| ||||||||||||    
T  50335001 tatacattaattattcaatatatctaaaaaataaatttt-gcttataatagtgaccggaggaagta 50335065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 455 - 527
Target Start/End: Original strand, 8439326 - 8439398
Alignment:
Q  455 taatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggagg 527  Q
    ||||| ||||||| | ||||||| | | ||||||  ||||| ||||||||||||||||| ||||| |||||||    
T  8439326 taataaagactatgtgcatcattaaatgaatgaacctaaaatataattttttgcttatattagtgaccggagg 8439398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 468 - 528
Target Start/End: Complemental strand, 21217225 - 21217165
Alignment:
Q  468 atacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggagga 528  Q
    |||||||||||| | ||||||| |||||  ||  |||||||||||||||||| ||||||||    
T  21217225 atacatcatttaatgaatgaatctaaaatgtagatttttgcttataatagtgaccggagga 21217165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 459 - 519
Target Start/End: Complemental strand, 22497019 - 22496959
Alignment:
Q  459 atagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtg 519  Q
    |||||| | |||||||||||| | ||||||| ||||| || | ||||||||||||||||||    
T  22497019 atagaccacatacatcatttaatgaatgaatctaaaatattaatttttgcttataatagtg 22496959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 449 - 533
Target Start/End: Complemental strand, 26104852 - 26104768
Alignment:
Q  449 gatcattaatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggaggaagtac 533  Q
    |||| ||| |||||||||||||||||||| | | ||||||  |||||  ||| |||||||||||| ||||| || |||| |||||    
T  26104852 gatctttattatagactatatacatcattaaatgaatgaacctaaaatgtaaatttttgcttatattagtgaccagagggagtac 26104768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 455 - 519
Target Start/End: Original strand, 30578290 - 30578354
Alignment:
Q  455 taatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtg 519  Q
    ||||| ||||| ||||||||||||| | ||||||| ||||| | ||  |||||||||||||||||    
T  30578290 taataaagactgtatacatcatttaatgaatgaatctaaaatacaaagttttgcttataatagtg 30578354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 416 - 512
Target Start/End: Complemental strand, 32711317 - 32711221
Alignment:
Q  416 actttttagattcattgaacgattgatatatgagatcattaatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttat 512  Q
    |||||||||||||||||||  |||||| |||  | ||  |||||||| | | |||||||| ||||||||||||  |||||| | | |||||||||||    
T  32711317 actttttagattcattgaataattgatgtatctggtctataatataggccaaatacatcaattattcaatgaacctaaaaagtgactttttgcttat 32711221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 458 - 506
Target Start/End: Complemental strand, 33068261 - 33068213
Alignment:
Q  458 tatagactatatacatcatttattcaatgaatttaaaaaataatttttt 506  Q
    ||||||| | |||||| || |||||||||||| ||||||||||||||||    
T  33068261 tatagaccaaatacattatgtattcaatgaatataaaaaataatttttt 33068213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 478 - 514
Target Start/End: Original strand, 33068283 - 33068319
Alignment:
Q  478 tattcaatgaatttaaaaaataattttttgcttataa 514  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  33068283 tattcaatgaatgtaaaaaataattttttgtttataa 33068319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 469 - 525
Target Start/End: Original strand, 36566717 - 36566773
Alignment:
Q  469 tacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccgga 525  Q
    ||||||||||||| ||||||| ||||||  ||  ||||||||||||||||| |||||    
T  36566717 tacatcatttattgaatgaatctaaaaagaaaacttttgcttataatagtgaccgga 36566773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 455 - 519
Target Start/End: Complemental strand, 40470490 - 40470426
Alignment:
Q  455 taatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtg 519  Q
    ||||| |||||| |||| ||||||| | ||||||| |||||| ||| |||||||||||| |||||    
T  40470490 taataaagactacatacgtcatttaatgaatgaatctaaaaattaaatttttgcttatattagtg 40470426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 466 - 526
Target Start/End: Complemental strand, 47334703 - 47334643
Alignment:
Q  466 atatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggag 526  Q
    |||||||||||| ||| ||||||||||||| | ||  |||||||||||||| || ||||||    
T  47334703 atatacatcattaattgaatgaatttaaaatacaaagttttgcttataatactgaccggag 47334643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 468 - 516
Target Start/End: Complemental strand, 50603584 - 50603536
Alignment:
Q  468 atacatcatttattcaatgaatttaaaaaataattttttgcttataata 516  Q
    |||||||||||||| |||||||||||||| |||  ||||| ||||||||    
T  50603584 atacatcatttattgaatgaatttaaaaagtaaaattttgtttataata 50603536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 468 - 540
Target Start/End: Complemental strand, 52168342 - 52168270
Alignment:
Q  468 atacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggaggaagtactatattt 540  Q
    |||||||||| ||| |||| || |||||| ||| |||||||||||| ||||| |||||||  |||| ||||||    
T  52168342 atacatcattaattaaatgtatctaaaaagtaaatttttgcttatattagtgaccggagggtgtacgatattt 52168270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 65; Significance: 3e-28; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 392 - 532
Target Start/End: Complemental strand, 44587778 - 44587638
Alignment:
Q  392 ggtcactattataattaaaaacttactttttagattcattgaacgattgatatatgagatcattaatatagactatatacatcatttattcaatgaattt 491  Q
    ||||||||||||||  |||||  |||||||||||||||||||| || |||| |||| | |||| ||||||||| | |||||||||||||||||||||  |    
T  44587778 ggtcactattataagcaaaaaactactttttagattcattgaatgagtgatgtatgtggtcatcaatatagaccacatacatcatttattcaatgaacct 44587679  T
Q  492 aaaaaataattttttgcttataatagtggccggaggaagta 532  Q
    |||||||| | |||||||||||||| || ||||||| ||||    
T  44587678 aaaaaatagtattttgcttataataatgaccggagggagta 44587638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 457 - 519
Target Start/End: Complemental strand, 45472480 - 45472418
Alignment:
Q  457 atatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtg 519  Q
    |||||||||| |||||||||||||| |||||||||||||| ||| ||||| ||||||||||||    
T  45472480 atatagactacatacatcatttattgaatgaatttaaaaagtaaatttttacttataatagtg 45472418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 455 - 516
Target Start/End: Complemental strand, 10996318 - 10996257
Alignment:
Q  455 taatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataata 516  Q
    ||||| |||| |||||||||||| ||||||||||||||||| |||| |||||||||||||||    
T  10996318 taataaagaccatatacatcattaattcaatgaatttaaaatataaatttttgcttataata 10996257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 388 - 519
Target Start/End: Complemental strand, 41824399 - 41824269
Alignment:
Q  388 ctccggtcactattataattaaaaacttactttttagattcattgaacgattgatatatgagatcattaatatagactatatacatcatttattcaatga 487  Q
    |||||||||||| ||||| |||||| | ||||||||| |||||| ||  | |||| |||| | ||  || |||| |||| |||||| ||||||| |||||    
T  41824399 ctccggtcactactataagtaaaaattgactttttaggttcattcaataaatgatgtatgtggtctata-tataaactacatacataatttattgaatga 41824301  T
Q  488 atttaaaaaataattttttgcttataatagtg 519  Q
    || |||||||| | ||||||||||||||||||    
T  41824300 atctaaaaaatgaatttttgcttataatagtg 41824269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 452 - 518
Target Start/End: Original strand, 8778645 - 8778711
Alignment:
Q  452 cattaatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagt 518  Q
    ||||| ||||||| ||||| ||||||| || ||||||| |||||| |||||||||||||||||||||    
T  8778645 cattagtatagaccatatatatcatttttttaatgaatctaaaaagtaattttttgcttataatagt 8778711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 389 - 526
Target Start/End: Original strand, 42530494 - 42530631
Alignment:
Q  389 tccggtcactattataattaaaaacttactttttagattcattgaacgattgatatatgagatcattaatatagactatatacatcatttattcaatgaa 488  Q
    ||||||||||||||||| |||||| |||| ||||||||||||| ||  | |  | |||  | || ||| ||||||| ||||||||| |||| | ||||||    
T  42530494 tccggtcactattataagtaaaaatttacattttagattcatttaattaatattgtatacggtctttattatagacaatatacatcgtttaatgaatgaa 42530593  T
Q  489 tttaaaaaataattttttgcttataatagtggccggag 526  Q
    | |||||  | | |||||||||||||||||| ||||||    
T  42530594 tgtaaaatgttaatttttgcttataatagtgaccggag 42530631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 388 - 532
Target Start/End: Original strand, 20218547 - 20218691
Alignment:
Q  388 ctccggtcactattataattaaaaacttactttttagattcattgaacgattgatatatgagatcattaatatagactatatacatcatttattcaatga 487  Q
    |||| |||||||||||||  |||||   ||||||||| |||||||||  |  ||| ||||   ||| || ||||||||  |||||||| |||||||||||    
T  20218547 ctccagtcactattataagcaaaaaaacactttttagtttcattgaataaccgatgtatgcagtcagtattatagactggatacatcaattattcaatga 20218646  T
Q  488 atttaaaaaataattttttgcttataatagtggccggaggaagta 532  Q
    || |||||| | |||| ||||||||||||||| | ||||| ||||    
T  20218647 atctaaaaagtgatttcttgcttataatagtgacaggagggagta 20218691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 458 - 518
Target Start/End: Complemental strand, 38871513 - 38871453
Alignment:
Q  458 tatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagt 518  Q
    ||||||| | |||||||||||||||||| |||||| |||||  ||||||||||||||||||    
T  38871513 tatagaccaaatacatcatttattcaataaatttagaaaattgttttttgcttataatagt 38871453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 451 - 519
Target Start/End: Complemental strand, 40363295 - 40363227
Alignment:
Q  451 tcattaatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtg 519  Q
    |||||||||||||  |  ||||||||||||||||||||  |||||| || |||||||||||||||||||    
T  40363295 tcattaatatagatcacgtacatcatttattcaatgaacctaaaaagtagttttttgcttataatagtg 40363227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 455 - 527
Target Start/End: Complemental strand, 41805346 - 41805274
Alignment:
Q  455 taatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggagg 527  Q
    ||||| ||||||||||||||||| ||| |||||||||||||   ||  ||||||||||||||||| |||||||    
T  41805346 taataaagactatatacatcattaattgaatgaatttaaaatgcaaaattttgcttataatagtgaccggagg 41805274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 473 - 531
Target Start/End: Original strand, 2144054 - 2144113
Alignment:
Q  473 tcatttattcaatgaatttaaaaaataatttt-ttgcttataatagtggccggaggaagt 531  Q
    ||||||||||||||||  |||||| ||||||| ||||||||||||||| |||||||||||    
T  2144054 tcatttattcaatgaacataaaaattaatttttttgcttataatagtgaccggaggaagt 2144113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 388 - 527
Target Start/End: Complemental strand, 11726634 - 11726496
Alignment:
Q  388 ctccggtcactattataattaaaaacttactttttagattcattgaacgattgatatatgagatcattaatatagactatatacatcatttattcaatga 487  Q
    |||| |||||||||||||  ||||| | || ||||||||||||| |   | |||| |||| ||||  ||||| ||| ||||||||||||| ||| |||||    
T  11726634 ctccagtcactattataagcaaaaattaacattttagattcattcattaaatgatgtatgtgatccataataaagattatatacatcattgattgaatga 11726535  T
Q  488 atttaaaaaataattttttgcttataatagtggccggagg 527  Q
    || |||||  | |||||| ||||||||||||| |||||||    
T  11726534 atctaaaatgttattttt-gcttataatagtgaccggagg 11726496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 456 - 527
Target Start/End: Original strand, 38181829 - 38181900
Alignment:
Q  456 aatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggagg 527  Q
    |||| ||||||||||||||||| ||| ||||||| |||||  || ||||||||||||||||||  |||||||    
T  38181829 aataaagactatatacatcattaattgaatgaatgtaaaatgtagttttttgcttataatagtaaccggagg 38181900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 458 - 528
Target Start/End: Complemental strand, 33775557 - 33775487
Alignment:
Q  458 tatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggagga 528  Q
    |||||||||||||||||| |||||||||||| | |||||||  ||||||  |||||||||||  |||||||    
T  33775557 tatagactatatacatcagttattcaatgaactaaaaaaatgttttttttattataatagtgatcggagga 33775487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 458 - 532
Target Start/End: Original strand, 37109032 - 37109106
Alignment:
Q  458 tatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggaggaagta 532  Q
    ||||||||| |||||||| || ||||||||||||||| | | | |||||| ||||||||||| ||||| ||||||    
T  37109032 tatagactaaatacatcagttcttcaatgaatttaaatattgaatttttgtttataatagtgaccggaagaagta 37109106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 457 - 519
Target Start/End: Original strand, 44094870 - 44094932
Alignment:
Q  457 atatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtg 519  Q
    |||||||||| ||||| |||||||| |||||||||||||||  |  |||||||||||||||||    
T  44094870 atatagactacatacaacatttattaaatgaatttaaaaaacgaacttttgcttataatagtg 44094932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 458 - 519
Target Start/End: Complemental strand, 44089495 - 44089434
Alignment:
Q  458 tatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtg 519  Q
    ||||||| || ||||||||||||||||||||| ||||| ||   ||||||||||||||||||    
T  44089495 tatagaccatgtacatcatttattcaatgaatataaaagatgtatttttgcttataatagtg 44089434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 388 - 533
Target Start/End: Original strand, 44274543 - 44274687
Alignment:
Q  388 ctccggtcactattataattaaaaacttactttttagattcattgaacgattgatatatgagatcattaatatagactatatacatcatttattcaatga 487  Q
    ||||||||||||||||||  ||||  | || ||||||||||||| ||  | |||||||||   ||  || || |||||| |||||||||||||| |||||    
T  44274543 ctccggtcactattataaacaaaagttgacattttagattcattcaataaatgatatatgtagtctata-tacagactacatacatcatttattgaatga 44274641  T
Q  488 atttaaaaaataattttttgcttataatagtggccggaggaagtac 533  Q
    || |||||| | | ||||||||||||  |||| ||||||| |||||    
T  44274642 atctaaaaagtgaatttttgcttatatcagtgaccggagggagtac 44274687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 455 - 507
Target Start/End: Complemental strand, 14796950 - 14796898
Alignment:
Q  455 taatatagactatatacatcatttattcaatgaatttaaaaaataattttttg 507  Q
    |||||||||||| |||||||||||||| ||| ||||| |||||||| ||||||    
T  14796950 taatatagactagatacatcatttattaaataaatttgaaaaataaatttttg 14796898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 457 - 517
Target Start/End: Complemental strand, 14952835 - 14952775
Alignment:
Q  457 atatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatag 517  Q
    |||||||||| || ||||||||||| ||||||||||||||  ||  |||||||||||||||    
T  14952835 atatagactacatgcatcatttattgaatgaatttaaaaagcaaacttttgcttataatag 14952775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 483 - 527
Target Start/End: Complemental strand, 15446823 - 15446779
Alignment:
Q  483 aatgaatttaaaaaataattttttgcttataatagtggccggagg 527  Q
    |||||||||||||||| | |||||||||||||||||| |||||||    
T  15446823 aatgaatttaaaaaatgaatttttgcttataatagtgaccggagg 15446779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 459 - 519
Target Start/End: Original strand, 15446850 - 15446910
Alignment:
Q  459 atagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtg 519  Q
    ||||||||||||||||||||| | ||||||  |||||||| | ||||| ||||||||||||    
T  15446850 atagactatatacatcatttaataaatgaacctaaaaaatgaatttttacttataatagtg 15446910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 458 - 506
Target Start/End: Complemental strand, 15969515 - 15969467
Alignment:
Q  458 tatagactatatacatcatttattcaatgaatttaaaaaataatttttt 506  Q
    |||| ||||||||||||| ||||||||| || |||||||||||||||||    
T  15969515 tataaactatatacatcagttattcaataaacttaaaaaataatttttt 15969467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 416 - 519
Target Start/End: Complemental strand, 29765775 - 29765671
Alignment:
Q  416 actttttagattcattgaacgattgatatatgagatcattaatatagactatatacatcatttattc-aatgaatttaaaaaataattttttgcttataa 514  Q
    |||||||||||||||||||  | ||||||||| | ||  || |||| || ||||| ||||||||||| ||| ||| ||| |||||  |||||||||||||    
T  29765775 actttttagattcattgaataagtgatatatgcggtctatattataaaccatatatatcatttattcaaataaatctaagaaatatatttttgcttataa 29765676  T
Q  515 tagtg 519  Q
    |||||    
T  29765675 tagtg 29765671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 458 - 518
Target Start/End: Original strand, 36104362 - 36104422
Alignment:
Q  458 tatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagt 518  Q
    |||| ||||||||||| ||||||| ||| |||||||| ||||| |||||| ||||||||||    
T  36104362 tataaactatatacataatttatttaataaatttaaacaataaatttttgtttataatagt 36104422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 465 - 528
Target Start/End: Complemental strand, 22373672 - 22373609
Alignment:
Q  465 tatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggagga 528  Q
    ||||||||||||| ||| |||  ||||||||||||  |||||||||||| ||||| ||||||||    
T  22373672 tatatacatcattaattgaatatatttaaaaaatatatttttgcttatattagtgaccggagga 22373609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 469 - 519
Target Start/End: Complemental strand, 27328306 - 27328255
Alignment:
Q  469 tacatcatttattcaatgaatttaaaaaat-aattttttgcttataatagtg 519  Q
    ||||||||||||||||||||| ||||||||  ||||||||||||||| ||||    
T  27328306 tacatcatttattcaatgaatataaaaaatgtattttttgcttataacagtg 27328255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 468 - 534
Target Start/End: Original strand, 27964364 - 27964428
Alignment:
Q  468 atacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggaggaagtact 534  Q
    |||||||||||||| ||||||| |||||  | |||||||| ||||||||||| ||||||| ||||||    
T  27964364 atacatcatttattaaatgaatctaaaa--tgattttttgtttataatagtgaccggagggagtact 27964428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 468 - 527
Target Start/End: Complemental strand, 32143465 - 32143406
Alignment:
Q  468 atacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggagg 527  Q
    |||||||||||| | |||||||||||||  |||  ||||||||||||||||| |||||||    
T  32143465 atacatcatttaataaatgaatttaaaatgtaaagttttgcttataatagtgaccggagg 32143406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 468 - 519
Target Start/End: Original strand, 44587724 - 44587775
Alignment:
Q  468 atacatcatttattcaatgaatttaaaaaataattttttgcttataatagtg 519  Q
    |||||||| | ||||||||||| |||||| || |||||||||||||||||||    
T  44587724 atacatcactcattcaatgaatctaaaaagtagttttttgcttataatagtg 44587775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 461 - 519
Target Start/End: Original strand, 7079444 - 7079502
Alignment:
Q  461 agactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtg 519  Q
    |||| |||||||||||| ||| ||||||| ||||| |||  ||||||||||||||||||    
T  7079444 agaccatatacatcattaattaaatgaatctaaaatatatgtttttgcttataatagtg 7079502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 477 - 519
Target Start/End: Complemental strand, 34359623 - 34359581
Alignment:
Q  477 ttattcaatgaatttaaaaaataattttttgcttataatagtg 519  Q
    ||||| ||||||| ||||||||||||||||| |||||||||||    
T  34359623 ttatttaatgaatctaaaaaataattttttgtttataatagtg 34359581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 460 - 513
Target Start/End: Original strand, 10222045 - 10222098
Alignment:
Q  460 tagactatatacatcatttattcaatgaatttaaaaaataattttttgcttata 513  Q
    ||||| |||||||||||||||| ||||| ||||||| || | ||||||||||||    
T  10222045 tagacaatatacatcatttattgaatgattttaaaatatgaatttttgcttata 10222098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 466 - 519
Target Start/End: Original strand, 11342049 - 11342102
Alignment:
Q  466 atatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtg 519  Q
    |||||||||||| ||| ||||||| ||||| |||  ||||||||||||||||||    
T  11342049 atatacatcattaattaaatgaatctaaaatatagatttttgcttataatagtg 11342102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 468 - 525
Target Start/End: Original strand, 13333528 - 13333585
Alignment:
Q  468 atacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccgga 525  Q
    |||||||||||| ||||||||| |||||  ||  |||||||||||||||||| |||||    
T  13333528 atacatcatttaatcaatgaatctaaaatgtagatttttgcttataatagtgaccgga 13333585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 468 - 513
Target Start/End: Original strand, 14308727 - 14308772
Alignment:
Q  468 atacatcatttattcaatgaatttaaaaaataattttttgcttata 513  Q
    |||||||||||||| ||||||| ||||| || ||||||||||||||    
T  14308727 atacatcatttattgaatgaatctaaaatatgattttttgcttata 14308772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 455 - 528
Target Start/End: Original strand, 27331827 - 27331900
Alignment:
Q  455 taatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggagga 528  Q
    ||||| |||||| |||||||||| ||| ||||||| |||||  |   |||||||||||||||||| ||||||||    
T  27331827 taataaagactacatacatcattaattgaatgaatctaaaatgttgatttttgcttataatagtgaccggagga 27331900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 456 - 525
Target Start/End: Original strand, 34359627 - 34359696
Alignment:
Q  456 aatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccgga 525  Q
    |||||| |||| |||||| | || |||||||||| | |||||| |||||||||||||| ||||| |||||    
T  34359627 aatatatactagatacattaatttttcaatgaatctgaaaaatgattttttgcttatattagtgaccgga 34359696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 471 - 532
Target Start/End: Original strand, 36129237 - 36129298
Alignment:
Q  471 catcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggaggaagta 532  Q
    ||||| |||||||||||||||||||| |   ||||||||||||||| || ||||| ||||||    
T  36129237 catcaattattcaatgaatttaaaaagtgtatttttgcttataataatgaccggatgaagta 36129298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 458 - 519
Target Start/End: Original strand, 37182887 - 37182948
Alignment:
Q  458 tatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtg 519  Q
    ||||||| | |||||||||||| | |||||||||||||  ||| ||||||| ||||||||||    
T  37182887 tatagaccacatacatcatttaatgaatgaatttaaaatgtaaatttttgcgtataatagtg 37182948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 496
Target Start/End: Complemental strand, 40255612 - 40255508
Alignment:
Q  391 cggtcactattataattaaaaacttactttttagattcattgaacgattgatatatgagatcattaatatagactatatacatcatttattcaatgaatt 490  Q
    |||| ||||||||||  ||||| |||||||||||||||||||||  | |||  |||  ||||| ||||||| |||| ||| || | |||||||||||||     
T  40255612 cggttactattataaaaaaaaa-ttactttttagattcattgaataactgaactatttgatcaataatataaactaaatatataaattattcaatgaatc 40255514  T
Q  491 taaaaa 496  Q
    ||||||    
T  40255513 taaaaa 40255508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 468 - 528
Target Start/End: Original strand, 3098207 - 3098267
Alignment:
Q  468 atacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggagga 528  Q
    |||||||||||| | ||||||| |||||  ||  |||||||||||||||||| ||||||||    
T  3098207 atacatcatttaatgaatgaatctaaaatgtagatttttgcttataatagtgaccggagga 3098267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 468 - 528
Target Start/End: Original strand, 3123984 - 3124044
Alignment:
Q  468 atacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggagga 528  Q
    |||||||||||||| ||||||| ||||| || | |||||||||||| | ||| ||||||||    
T  3123984 atacatcatttattgaatgaatctaaaacatgaatttttgcttatatttgtgaccggagga 3124044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 463 - 527
Target Start/End: Original strand, 8510581 - 8510645
Alignment:
Q  463 actatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggagg 527  Q
    ||||||||||||||||| | |||||||  ||||  | | |||||||||||||||||| |||||||    
T  8510581 actatatacatcatttaatgaatgaatccaaaatgttagtttttgcttataatagtgaccggagg 8510645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 468 - 516
Target Start/End: Complemental strand, 14803096 - 14803048
Alignment:
Q  468 atacatcatttattcaatgaatttaaaaaataattttttgcttataata 516  Q
    |||||||| |||||| || ||| |||||||||||| |||||||||||||    
T  14803096 atacatcaattattctataaatctaaaaaataattgtttgcttataata 14803048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 468 - 528
Target Start/End: Original strand, 25270937 - 25270997
Alignment:
Q  468 atacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggagga 528  Q
    |||||||||||| | ||||||| |||||  ||  |||||||||||||||||| ||||||||    
T  25270937 atacatcatttaatgaatgaatctaaaatgtagatttttgcttataatagtgaccggagga 25270997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 457 - 541
Target Start/End: Complemental strand, 27964354 - 27964270
Alignment:
Q  457 atatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggaggaagtactatatttt 541  Q
    |||||||| | |||||| ||||||| ||||||  |||||| | | ||||||||||||| |||| ||||||| |||| ||| ||||    
T  27964354 atatagaccacatacataatttattgaatgaacctaaaaagtcaatttttgcttataaaagtgaccggagggagtattatttttt 27964270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 414 - 442
Target Start/End: Complemental strand, 31952876 - 31952848
Alignment:
Q  414 ttactttttagattcattgaacgattgat 442  Q
    |||||||||||||||||||||||||||||    
T  31952876 ttactttttagattcattgaacgattgat 31952848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 466 - 534
Target Start/End: Complemental strand, 40204501 - 40204433
Alignment:
Q  466 atatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggaggaagtact 534  Q
    |||||||||||| ||| ||||||| || || |||  ||||||||||||||||||  ||||||| |||||    
T  40204501 atatacatcattaattgaatgaatgtataatatagatttttgcttataatagtgatcggaggatgtact 40204433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 456 - 516
Target Start/End: Complemental strand, 40534588 - 40534528
Alignment:
Q  456 aatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataata 516  Q
    ||||||||||| ||||||||||||| ||||||| | ||||||| | || || |||||||||    
T  40534588 aatatagactagatacatcatttatacaatgaactaaaaaaatcaattgtttcttataata 40534528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 457 - 529
Target Start/End: Complemental strand, 44274612 - 44274540
Alignment:
Q  457 atatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggaggaa 529  Q
    |||||||||| ||| |||||||||| ||||||| |||||  | |  ||||| ||||||||||| |||||||||    
T  44274612 atatagactacatatatcatttattgaatgaatctaaaatgtcaacttttgtttataatagtgaccggaggaa 44274540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 64; Significance: 1e-27; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 389 - 519
Target Start/End: Original strand, 12736357 - 12736488
Alignment:
Q  389 tccggtcactattataattaaaaacttactttttagattcattgaacgattgatatatgagatcattaatatagactatatacatcatttattcaatgaa 488  Q
    |||||| ||||||||||  |||||  |||||||||| ||||||||| ||||||| |||| |||||||||| ||||| |||||||||||||||||||||||    
T  12736357 tccggttactattataagcaaaaaactactttttaggttcattgaatgattgatgtatgtgatcattaatgtagaccatatacatcatttattcaatgaa 12736456  T
Q  489 tttaaaaaata-attttttgcttataatagtg 519  Q
      ||| |||||  |||||||||||||||||||    
T  12736457 cctaagaaatagtttttttgcttataatagtg 12736488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 460 - 519
Target Start/End: Complemental strand, 13841915 - 13841856
Alignment:
Q  460 tagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtg 519  Q
    ||||||| |||||||||||||| |||||||||||||| ||| ||||||||||||||||||    
T  13841915 tagactaaatacatcatttattgaatgaatttaaaaagtaaatttttgcttataatagtg 13841856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 456 - 541
Target Start/End: Complemental strand, 10934674 - 10934589
Alignment:
Q  456 aatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggaggaagtactatatttt 541  Q
    |||| |||||| |||||||||| ||| ||||||| ||||| ||| ||||||||||||||||||| |||||||  |||| |||||||    
T  10934674 aataaagactacatacatcattaattaaatgaatgtaaaatatagttttttgcttataatagtgaccggagggtgtacaatatttt 10934589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 453 - 525
Target Start/End: Original strand, 24052894 - 24052966
Alignment:
Q  453 attaatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccgga 525  Q
    ||||||||| || |||||||||||||||||||||||  |||||| ||  |||||| ||||||||||| |||||    
T  24052894 attaatataaaccatatacatcatttattcaatgaacctaaaaagtagatttttgtttataatagtgaccgga 24052966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 468 - 519
Target Start/End: Original strand, 1988924 - 1988975
Alignment:
Q  468 atacatcatttattcaatgaatttaaaaaataattttttgcttataatagtg 519  Q
    |||||||||||||||||| |||||||||||||  |||||| |||||||||||    
T  1988924 atacatcatttattcaataaatttaaaaaatatatttttgtttataatagtg 1988975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 388 - 519
Target Start/End: Complemental strand, 24820436 - 24820306
Alignment:
Q  388 ctccggtcactattataattaaaaacttactttttagattcattgaacgattgatatatgagatcattaatatagactatatacatcatttattcaatga 487  Q
    ||||||||||||||||||  ||||| |  ||||||||||||||| ||  | |||| |||| |||| ||| |||| || | |||||||||||||| |||||    
T  24820436 ctccggtcactattataagcaaaaattctctttttagattcattcaataaatgatgtatgtgatcttta-tataaaccacatacatcatttattgaatga 24820338  T
Q  488 atttaaaaaataattttttgcttataatagtg 519  Q
    |  ||| || | | ||||||||||||||||||    
T  24820337 acctaagaagtgaatttttgcttataatagtg 24820306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 454 - 496
Target Start/End: Original strand, 9812493 - 9812535
Alignment:
Q  454 ttaatatagactatatacatcatttattcaatgaatttaaaaa 496  Q
    ||||||| |||||||||||||||||||||||| ||||||||||    
T  9812493 ttaatattgactatatacatcatttattcaataaatttaaaaa 9812535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 465 - 519
Target Start/End: Original strand, 28480717 - 28480771
Alignment:
Q  465 tatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtg 519  Q
    ||||||||| ||||||| |||||||||| ||||||  ||||||||||||||||||    
T  28480717 tatatacataatttattgaatgaatttagaaaatacatttttgcttataatagtg 28480771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 457 - 514
Target Start/End: Original strand, 30114812 - 30114868
Alignment:
Q  457 atatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataa 514  Q
    |||||||| | |||||| | |||||||||||||||||||||| |||||||||||||||    
T  30114812 atatagaccaaatacattagttattcaatgaatttaaaaaat-attttttgcttataa 30114868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 388 - 516
Target Start/End: Original strand, 2627175 - 2627303
Alignment:
Q  388 ctccggtcactattataattaaaaacttactttttagattcattgaacgattgatatatgagatcattaatatagactatatacatcatttattcaatga 487  Q
    ||||||||||||||||||  | ||  | |||||||||||||||| ||  | | || |||  | ||| |||||||||||| ||||| |||||||| |||||    
T  2627175 ctccggtcactattataagcataagataactttttagattcattcaataaataatgtatttggtcaataatatagactaaatacaccatttattgaatga 2627274  T
Q  488 atttaaaaaataattttttgcttataata 516  Q
    | ||||||| | | |||||||| ||||||    
T  2627275 acttaaaaagttaatttttgctaataata 2627303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 455 - 527
Target Start/End: Original strand, 5888404 - 5888476
Alignment:
Q  455 taatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggagg 527  Q
    ||||| |||| |||||||||||| ||| ||||||| || ||| ||  |||||||||||||||||| |||||||    
T  5888404 taataaagaccatatacatcattaattgaatgaatctacaaagtagatttttgcttataatagtgcccggagg 5888476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 455 - 519
Target Start/End: Complemental strand, 13964491 - 13964427
Alignment:
Q  455 taatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtg 519  Q
    |||||||||| | |||||||||||||| |||||||||||||  |   ||||||||||||||||||    
T  13964491 taatatagaccacatacatcatttattgaatgaatttaaaatgttgatttttgcttataatagtg 13964427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 455 - 519
Target Start/End: Original strand, 17871831 - 17871895
Alignment:
Q  455 taatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtg 519  Q
    |||||||||||| |||||||||||| | ||||||  ||||||||   ||||||||||||||||||    
T  17871831 taatatagactaaatacatcatttaatgaatgaacctaaaaaattgatttttgcttataatagtg 17871895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 468 - 532
Target Start/End: Complemental strand, 44329216 - 44329152
Alignment:
Q  468 atacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggaggaagta 532  Q
    |||||| | |||||||||| ||||||||||| |||||||||||||||| ||| | ||||| ||||    
T  44329216 atacattaattattcaatgtatttaaaaaatcattttttgcttataattgtgactggagggagta 44329152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 388 - 519
Target Start/End: Complemental strand, 5888475 - 5888344
Alignment:
Q  388 ctccggtcactattataattaaaaacttactttttagattcattgaacgattgatatatgagatcattaatatagactatatacatcatttattcaatga 487  Q
    |||||| |||||||||||  |||||  |||||| |||||||||| ||  | |||| |||  | || ||| ||||||| | |||||||||||| | |||||    
T  5888475 ctccgggcactattataagcaaaaatctactttgtagattcattcaattaatgatgtatatggtctttattatagacaacatacatcatttaatgaatga 5888376  T
Q  488 atttaaaaaataattttttgcttataatagtg 519  Q
    || |||||  | | ||||||||||||||||||    
T  5888375 atctaaaacgttaatttttgcttataatagtg 5888344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 466 - 525
Target Start/End: Original strand, 10117049 - 10117108
Alignment:
Q  466 atatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccgga 525  Q
    |||||||||||| ||| ||||||| |||||  ||| |||||||||||||||||| |||||    
T  10117049 atatacatcattaattgaatgaatctaaaatgtaaatttttgcttataatagtgaccgga 10117108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 398 - 517
Target Start/End: Original strand, 16489149 - 16489268
Alignment:
Q  398 tattataattaaaaacttactttttagattcattgaacgattgatatatgagatcattaatatagactatatacatcatttattcaatgaatttaaaaaa 497  Q
    |||||||  |||||| ||| |||||||||||||||||  | | |||||||  || |||||||||||  | |||||| |||||||| || || ||||||||    
T  16489149 tattatatgtaaaaaattaatttttagattcattgaattaataatatatgttattattaatatagatcacatacattatttattcgataaacttaaaaaa 16489248  T
Q  498 taattttttgcttataatag 517  Q
    |  | ||||| |||||||||    
T  16489249 ttgtattttgtttataatag 16489268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 457 - 516
Target Start/End: Complemental strand, 20269834 - 20269775
Alignment:
Q  457 atatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataata 516  Q
    ||||| || |||||||||||||||| ||| ||  ||||||||||||||||| ||||||||    
T  20269834 atataaaccatatacatcatttattgaataaacctaaaaaataattttttgtttataata 20269775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 457 - 516
Target Start/End: Complemental strand, 21056463 - 21056404
Alignment:
Q  457 atatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataata 516  Q
    ||||| || |||||||||||||||| ||| ||  ||||||||||||||||| ||||||||    
T  21056463 atataaaccatatacatcatttattgaataaacctaaaaaataattttttgtttataata 21056404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 468 - 527
Target Start/End: Original strand, 24820378 - 24820437
Alignment:
Q  468 atacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggagg 527  Q
    |||||||||||||| ||||||| ||||||   | |||||||||||||||||| |||||||    
T  24820378 atacatcatttattgaatgaatctaaaaagagaatttttgcttataatagtgaccggagg 24820437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 455 - 498
Target Start/End: Original strand, 34181571 - 34181614
Alignment:
Q  455 taatatagactatatacatcatttattcaatgaatttaaaaaat 498  Q
    ||||||| |||| |||||||||||||||||||||||| ||||||    
T  34181571 taatataaactaaatacatcatttattcaatgaatttgaaaaat 34181614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 449 - 527
Target Start/End: Original strand, 31271594 - 31271672
Alignment:
Q  449 gatcattaatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggagg 527  Q
    ||||| ||||| |||||| |||||||| ||||| ||| ||||| |||| |   |||||||||||||||||| |||||||    
T  31271594 gatcaataatacagactaaatacatcacttattgaataaatttgaaaagttgatttttgcttataatagtgaccggagg 31271672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 455 - 525
Target Start/End: Original strand, 41387830 - 41387900
Alignment:
Q  455 taatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccgga 525  Q
    ||||| |||| | |||||| ||||| | ||||||| ||||| ||| ||||||||||||||||||| |||||    
T  41387830 taataaagaccacatacattatttaatgaatgaatctaaaatatagttttttgcttataatagtgaccgga 41387900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 458 - 528
Target Start/End: Complemental strand, 42749124 - 42749054
Alignment:
Q  458 tatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggagga 528  Q
    ||||||||| |||||||||||| | ||||||| ||||||  ||  ||||||||||| ||||| ||||||||    
T  42749124 tatagactacatacatcatttaatgaatgaatctaaaaatcaaacttttgcttatattagtgaccggagga 42749054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 434
Target Start/End: Original strand, 6883627 - 6883672
Alignment:
Q  389 tccggtcactattataattaaaaacttactttttagattcattgaa 434  Q
    |||| |||||||||||| |||||| |||||||||||||||| ||||    
T  6883627 tccgatcactattataaataaaaagttactttttagattcaatgaa 6883672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 416 - 489
Target Start/End: Complemental strand, 10184666 - 10184593
Alignment:
Q  416 actttttagattcattgaacgattgatatatgagatcattaatatagactatatacatcatttattcaatgaat 489  Q
    |||||||||||||||||||  |||||| |||  ||||   ||||||||| | ||||||||||||| ||||||||    
T  10184666 actttttagattcattgaataattgatgtatatgatccagaatatagaccaaatacatcatttatacaatgaat 10184593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 458 - 527
Target Start/End: Complemental strand, 24053666 - 24053597
Alignment:
Q  458 tatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggagg 527  Q
    ||||||| | |||||||||| | | ||||||  ||||| ||||||||||||||||| ||||| |||||||    
T  24053666 tatagaccacatacatcattaaatgaatgaacctaaaatataattttttgcttatattagtgaccggagg 24053597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 458 - 527
Target Start/End: Complemental strand, 24287854 - 24287785
Alignment:
Q  458 tatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggagg 527  Q
    ||||||| |||||||||||||| | ||||||| |||||   ||  ||||||||||||||||| |||||||    
T  24287854 tatagaccatatacatcatttaatgaatgaatctaaaatgcaaagttttgcttataatagtgaccggagg 24287785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 457 - 514
Target Start/End: Original strand, 24418950 - 24419007
Alignment:
Q  457 atatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataa 514  Q
    |||||||| | |||||||||||||| ||||||| |||||| | | |||||||||||||    
T  24418950 atatagacgacatacatcatttattgaatgaatctaaaaagtgaatttttgcttataa 24419007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 458 - 527
Target Start/End: Complemental strand, 33070234 - 33070165
Alignment:
Q  458 tatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggagg 527  Q
    ||||||||| |||||||||||| | ||||||| ||||| | ||  |||||||||||| |||| |||||||    
T  33070234 tatagactacatacatcatttaatgaatgaatctaaaatacaaagttttgcttataacagtgaccggagg 33070165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 457 - 498
Target Start/End: Complemental strand, 38779303 - 38779262
Alignment:
Q  457 atatagactatatacatcatttattcaatgaatttaaaaaat 498  Q
    ||||||| ||||||||| ||||||||||| ||||||||||||    
T  38779303 atatagaatatatacattatttattcaataaatttaaaaaat 38779262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 419 - 496
Target Start/End: Original strand, 43295920 - 43295997
Alignment:
Q  419 ttttagattcattgaacgattgatatatgagatcattaatatagactatatacatcatttattcaatgaatttaaaaa 496  Q
    ||||||||||||| || || |||| |||| | ||  || ||||||| | |||||||||||||| ||||||||||||||    
T  43295920 ttttagattcattcaatgaatgatgtatgtggtccatattatagaccacatacatcatttattgaatgaatttaaaaa 43295997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 458 - 534
Target Start/End: Complemental strand, 2296543 - 2296467
Alignment:
Q  458 tatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggaggaagtact 534  Q
    ||||||| |||||||||||||| | ||||||| |||||  |||  |||||||||||||| ||  ||||||| |||||    
T  2296543 tatagaccatatacatcatttaatgaatgaatctaaaatgtaaaattttgcttataataatgatcggaggatgtact 2296467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 455 - 495
Target Start/End: Original strand, 6189702 - 6189742
Alignment:
Q  455 taatatagactatatacatcatttattcaatgaatttaaaa 495  Q
    |||||||||||| |||||||||||||| ||||||| |||||    
T  6189702 taatatagactaaatacatcatttattgaatgaatctaaaa 6189742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 453 - 497
Target Start/End: Original strand, 8739664 - 8739708
Alignment:
Q  453 attaatatagactatatacatcatttattcaatgaatttaaaaaa 497  Q
    |||||||||||| | ||||||||||||||  ||||||||||||||    
T  8739664 attaatatagaccacatacatcatttatttcatgaatttaaaaaa 8739708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 456 - 516
Target Start/End: Complemental strand, 9550184 - 9550124
Alignment:
Q  456 aatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataata 516  Q
    ||||||||||| |||||||| |||  ||||||||||||||||| | || || |||||||||    
T  9550184 aatatagactagatacatcacttacccaatgaatttaaaaaatcaattatttcttataata 9550124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 389 - 489
Target Start/End: Complemental strand, 10117108 - 10117008
Alignment:
Q  389 tccggtcactattataattaaaaacttactttttagattcattgaacgattgatatatgagatcattaatatagactatatacatcatttattcaatgaa 488  Q
    |||||||||||||||||  ||||| |||| ||||||||||||| ||  | |||| |||  |||  ||| ||||||| | |||||||||||| | ||||||    
T  10117108 tccggtcactattataagcaaaaatttacattttagattcattcaattaatgatgtatatgatatttattatagaccacatacatcatttaatgaatgaa 10117009  T
Q  489 t 489  Q
    |    
T  10117008 t 10117008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 483 - 527
Target Start/End: Original strand, 13496531 - 13496575
Alignment:
Q  483 aatgaatttaaaaaataattttttgcttataatagtggccggagg 527  Q
    |||||||||||||  ||| |||||||||||||||||| |||||||    
T  13496531 aatgaatttaaaatgtaaatttttgcttataatagtgaccggagg 13496575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 457 - 533
Target Start/End: Complemental strand, 24418951 - 24418875
Alignment:
Q  457 atatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggaggaagtac 533  Q
    |||||||| | |||||||||||||| |||||| ||||||| | |  ||| || |||||||||| ||||||| |||||    
T  24418951 atatagaccacatacatcatttattgaatgaacttaaaaagtcaactttagcctataatagtgaccggagggagtac 24418875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 468 - 528
Target Start/End: Complemental strand, 36696484 - 36696424
Alignment:
Q  468 atacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggagga 528  Q
    |||||| ||||||| ||||||  |||||||||| |||||  ||||||||||| ||||||||    
T  36696484 atacataatttattaaatgaacctaaaaaataaatttttatttataatagtgaccggagga 36696424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 457 - 516
Target Start/End: Complemental strand, 37509006 - 37508946
Alignment:
Q  457 atatagactatatacatcatttattcaatgaatttaaaaaat-aattttttgcttataata 516  Q
    ||||| |||| ||| || ||||||| |||||||||||||||| ||||||||| ||||||||    
T  37509006 atatatactacatatattatttattgaatgaatttaaaaaatgaattttttgtttataata 37508946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 388 - 527
Target Start/End: Original strand, 40098761 - 40098900
Alignment:
Q  388 ctccggtcactattataattaaaaacttactttttagattcattgaacgattgatatatgagatcat-taatatagactatatacatcatttattcaatg 486  Q
    |||||||||||| |||||  |||||  |||||||||||| |||| ||  | ||||||||| || ||| ||||| |||| | |||||||||| ||| ||||    
T  40098761 ctccggtcactaatataagcaaaaatctactttttagatacattcaattaatgatatatgtga-catataataaagaccacatacatcattaattgaatg 40098859  T
Q  487 aatttaaaaaataattttttgcttataatagtggccggagg 527  Q
     || |||||| |   |||||||||||| ||||| |||||||    
T  40098860 tatctaaaaagtggatttttgcttatattagtgaccggagg 40098900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 455 - 519
Target Start/End: Original strand, 45045445 - 45045509
Alignment:
Q  455 taatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtg 519  Q
    ||||| |||| |||||||||||| ||| ||||||| ||||| |||  |||||| |||||||||||    
T  45045445 taataaagaccatatacatcattaattgaatgaatctaaaatatagatttttgtttataatagtg 45045509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 53; Significance: 4e-21; HSPs: 63)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 388 - 524
Target Start/End: Original strand, 3967706 - 3967842
Alignment:
Q  388 ctccggtcactattataattaaaaacttactttttagattcattgaacgattgatatatgagatcattaatatagactatatacatcatttattcaatga 487  Q
    ||||| ||||||||||||  |||||  |||||||||| ||||||||| || |||| ||   || ||||||||||| | | ||||||||||||||||||||    
T  3967706 ctccgatcactattataagcaaaaaactactttttaggttcattgaatgagtgatgtaattgaccattaatatagtccacatacatcatttattcaatga 3967805  T
Q  488 atttaaaaaataattttttgcttataatagtggccgg 524  Q
    |  |||||| || ||||||||||||||||||| ||||    
T  3967806 acctaaaaagtagttttttgcttataatagtgaccgg 3967842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 388 - 532
Target Start/End: Complemental strand, 37491412 - 37491268
Alignment:
Q  388 ctccggtcactattataattaaaaacttactttttagattcattgaacgattgatatatgagatcattaatatagactatatacatcatttattcaatga 487  Q
    |||| |||||||||||||| ||||  |||||||||||||||||| ||  | |||| |||  | ||| | |||||||||| |||||||||||||| ||| |    
T  37491412 ctccagtcactattataatcaaaagtttactttttagattcatttaataaatgatgtatatggtcacttatatagactacatacatcatttatttaataa 37491313  T
Q  488 atttaaaaaataattttttgcttataatagtggccggaggaagta 532  Q
    || |||||| ||| |||||||||||||||||| ||  ||||||||    
T  37491312 atctaaaaagtaaatttttgcttataatagtgaccaaaggaagta 37491268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 416 - 527
Target Start/End: Complemental strand, 43813236 - 43813125
Alignment:
Q  416 actttttagattcattgaacgattgatatatgagatcattaatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataat 515  Q
    |||| ||||||||||| ||  | |||| |||| | ||| || ||||||||| |||| ||||||||| ||||||| |||||| ||| ||||||||||||||    
T  43813236 acttcttagattcattcaataaatgatgtatgtggtcaatattatagactacatacttcatttattgaatgaatctaaaaattaaatttttgcttataat 43813137  T
Q  516 agtggccggagg 527  Q
    |||| |||||||    
T  43813136 agtgaccggagg 43813125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 479 - 532
Target Start/End: Complemental strand, 47712527 - 47712474
Alignment:
Q  479 attcaatgaatttaaaaaataattttttgcttataatagtggccggaggaagta 532  Q
    |||||||||| || ||||||| ||||||||||||||||||||||||||||||||    
T  47712527 attcaatgaacttcaaaaatagttttttgcttataatagtggccggaggaagta 47712474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 455 - 525
Target Start/End: Original strand, 34478303 - 34478373
Alignment:
Q  455 taatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccgga 525  Q
    |||||||||| | |||||||||||| | ||||||| |||||||| | |||||||||||||||||| |||||    
T  34478303 taatatagaccaaatacatcatttagtaaatgaatctaaaaaattaatttttgcttataatagtgaccgga 34478373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 388 - 532
Target Start/End: Original strand, 47534971 - 47535116
Alignment:
Q  388 ctccggtcactattataattaaaaacttactttttagattcattgaacgattgatatatgagatcattaatatagactatatacatcatttattcaatga 487  Q
    ||||||||||||||||||  |||||  |||||||||  |||||| || || |||| |||    |||||||||| ||| | |||||||||||||| |||||    
T  47534971 ctccggtcactattataagcaaaaaactactttttaagttcattaaatgagtgatgtatcttgtcattaatatggaccacatacatcatttattgaatga 47535070  T
Q  488 atttaaaa-aataattttttgcttataatagtggccggaggaagta 532  Q
    || |||||   || |||||||||||||||||||  |||||| ||||    
T  47535071 atctaaaaggttatttttttgcttataatagtgatcggagggagta 47535116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 457 - 533
Target Start/End: Original strand, 8169166 - 8169242
Alignment:
Q  457 atatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggaggaagtac 533  Q
    |||||||||| |||||||||||||| ||||||| |||||| | |  ||||||||||||||||  ||||| |||||||    
T  8169166 atatagactacatacatcatttattgaatgaatctaaaaagttaacttttgcttataatagtaaccggatgaagtac 8169242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 439 - 519
Target Start/End: Original strand, 31319568 - 31319648
Alignment:
Q  439 tgatatatgagatcattaatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtg 519  Q
    ||||||||| | || ||| ||||||||| ||||||||||| || ||||||| |||||||||  ||||| ||||||||||||    
T  31319568 tgatatatgtggtctttattatagactacatacatcattttttgaatgaatctaaaaaatatatttttccttataatagtg 31319648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 388 - 519
Target Start/End: Complemental strand, 23797487 - 23797356
Alignment:
Q  388 ctccggtcactattataattaaaaacttactttttagattcattgaacgattgatatatgagatcattaatatagactatatacatcatttattcaatga 487  Q
    |||||||||||||||||| |||||  || | ||||||||||||| ||  | |||| |||  | || ||| ||||||||| |||||||||||| | |||||    
T  23797487 ctccggtcactattataagtaaaattttgcattttagattcattcaattaatgatgtatctggtctttattatagactacatacatcatttaatgaatga 23797388  T
Q  488 atttaaaaaataattttttgcttataatagtg 519  Q
    || |||||   ||  |||||||||||||||||    
T  23797387 atctaaaatgcaaaattttgcttataatagtg 23797356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 389 - 488
Target Start/End: Original strand, 47708403 - 47708502
Alignment:
Q  389 tccggtcactattataattaaaaacttactttttagattcattgaacgattgatatatgagatcattaatatagactatatacatcatttattcaatgaa 488  Q
    |||| ||||||||||||  |||||  |||||||||  ||||||||| || |||| ||||   |||||||||||||| | |||||||||||||| ||||||    
T  47708403 tccgatcactattataagcaaaaaactactttttaagttcattgaatgagtgatgtatgttgtcattaatatagaccacatacatcatttattaaatgaa 47708502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 458 - 516
Target Start/End: Complemental strand, 24617866 - 24617808
Alignment:
Q  458 tatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataata 516  Q
    |||||||||||||||| ||||||| ||||||| |||||||||  |||||| ||||||||    
T  24617866 tatagactatatacattatttattgaatgaatctaaaaaatacatttttgtttataata 24617808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 407 - 505
Target Start/End: Original strand, 47538780 - 47538877
Alignment:
Q  407 taaaaacttactttttagattcattgaacgattgatatatgagatcattaatatagactatatacatcatttattcaatgaatttaaaaaataattttt 505  Q
    |||||| ||| |||||||||| ||||||  |||||| |||  | ||| |||||||||||||||||||||||| || ||||||| ||| || ||||||||    
T  47538780 taaaaagttaatttttagatttattgaataattgatgtatttggtcaataatatagactatatacatcattt-ttaaatgaatctaagaagtaattttt 47538877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 407 - 505
Target Start/End: Original strand, 47545337 - 47545434
Alignment:
Q  407 taaaaacttactttttagattcattgaacgattgatatatgagatcattaatatagactatatacatcatttattcaatgaatttaaaaaataattttt 505  Q
    |||||| ||| |||||||||| ||||||  |||||| |||  | ||| |||||||||||||||||||||||| || ||||||| ||| || ||||||||    
T  47545337 taaaaagttaatttttagatttattgaataattgatgtatttggtcaataatatagactatatacatcattt-ttaaatgaatctaagaagtaattttt 47545434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 468 - 525
Target Start/End: Original strand, 2943293 - 2943350
Alignment:
Q  468 atacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccgga 525  Q
    |||||| ||| ||| ||||||| ||||| ||||||||||||||||||||||| |||||    
T  2943293 atacattattaattgaatgaatgtaaaatataattttttgcttataatagtgaccgga 2943350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 458 - 527
Target Start/End: Complemental strand, 8595216 - 8595147
Alignment:
Q  458 tatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggagg 527  Q
    ||||||||| |||||||||||| | ||||||| |||||||||| ||||| |||||| | ||| |||||||    
T  8595216 tatagactacatacatcatttaatgaatgaatctaaaaaataaattttttcttatatttgtgaccggagg 8595147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 458 - 527
Target Start/End: Complemental strand, 16777961 - 16777892
Alignment:
Q  458 tatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggagg 527  Q
    ||||||||| |||||||||||| | ||||||| |||||| |||  ||||||||||| ||||| |||||||    
T  16777961 tatagactacatacatcatttaataaatgaatctaaaaattaaacttttgcttatattagtgaccggagg 16777892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 388 - 532
Target Start/End: Complemental strand, 34750468 - 34750323
Alignment:
Q  388 ctccggtcactattataattaaaaact-tactttttagattcattgaacgattgatatatgagatcattaatatagactatatacatcatttattcaatg 486  Q
    ||||||||||||||||||  |||||   |||||||||  |||||||||  | |||| || | | ||||| || ||||| |||||||||||||||||  ||    
T  34750468 ctccggtcactattataagcaaaaaaactactttttaagttcattgaataagtgatgtacgtggtcattgatttagaccatatacatcatttattcggtg 34750369  T
Q  487 aatttaaaaaataattttttgcttataatagtggccggaggaagta 532  Q
    ||  |||||| ||  |||||||||||||||||  ||||||| ||||    
T  34750368 aacctaaaaagtagatttttgcttataatagtaaccggagggagta 34750323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 469 - 533
Target Start/End: Original strand, 34750410 - 34750475
Alignment:
Q  469 tacatcatttattcaatgaatttaaaaaataatttt-ttgcttataatagtggccggaggaagtac 533  Q
    ||||||| |||||||||||| ||||||| || |||| ||||||||||||||| ||||||| |||||    
T  34750410 tacatcacttattcaatgaacttaaaaagtagtttttttgcttataatagtgaccggagggagtac 34750475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 457 - 518
Target Start/End: Original strand, 38940289 - 38940350
Alignment:
Q  457 atatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagt 518  Q
    |||||||||| |||||||||||||| |||||||||||||| | | |||||  ||||||||||    
T  38940289 atatagactacatacatcatttattaaatgaatttaaaaagtgaatttttaattataatagt 38940350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 454 - 527
Target Start/End: Complemental strand, 43103145 - 43103072
Alignment:
Q  454 ttaatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggagg 527  Q
    ||||||||| ||  |||||||||||| | |||||||||||||  | | |||||||||||||||||| |||||||    
T  43103145 ttaatatagtctgcatacatcatttaataaatgaatttaaaatgttaatttttgcttataatagtgaccggagg 43103072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 388 - 484
Target Start/End: Original strand, 2456337 - 2456433
Alignment:
Q  388 ctccggtcactattataattaaaaacttactttttagattcattgaacgattgatatatgagatcattaatatagactatatacatcatttattcaa 484  Q
    ||||| ||||||||||||  |||||  |||||||||| |||||||||  | |||| |||| |  ||||||||||||| | ||| |||||||||||||    
T  2456337 ctccgatcactattataagcaaaaatctactttttaggttcattgaattaatgatgtatgtggacattaatatagaccacatatatcatttattcaa 2456433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 463 - 527
Target Start/End: Original strand, 5950270 - 5950334
Alignment:
Q  463 actatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggagg 527  Q
    ||||||||||||||||| | ||||||| |||||  | | |||||||||||||||||| |||||||    
T  5950270 actatatacatcatttaatgaatgaatctaaaatgttagtttttgcttataatagtgaccggagg 5950334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 391 - 527
Target Start/End: Complemental strand, 8447853 - 8447717
Alignment:
Q  391 cggtcactattataattaaaaacttactttttagattcattgaacgattgatatatgagatcattaatatagactatatacatcatttattcaatgaatt 490  Q
    |||||||||||||||  |||||  ||| ||||||||||||| |  || ||||  |   |||| ||| ||||||| |||||||||||| | | ||||||      
T  8447853 cggtcactattataagcaaaaatctacattttagattcattcattgaatgatgcacatgatctttattatagaccatatacatcattaaatgaatgaacc 8447754  T
Q  491 taaaaaataattttttgcttataatagtggccggagg 527  Q
    ||||| ||| ||||||||||||| ||||| |||||||    
T  8447753 taaaatatagttttttgcttatattagtgaccggagg 8447717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 455 - 527
Target Start/End: Original strand, 8571450 - 8571522
Alignment:
Q  455 taatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggagg 527  Q
    ||||| || ||| |||||||||||| | ||||||||||||||  || |||||||||||| ||||| |||||||    
T  8571450 taataaagtctacatacatcatttaatgaatgaatttaaaaatcaaatttttgcttatattagtgaccggagg 8571522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 388 - 528
Target Start/End: Complemental strand, 10422947 - 10422807
Alignment:
Q  388 ctccggtcactattataattaaaaacttactttttagattcattgaacgattgatatatgagatcattaatatagactatatacatcatttattcaatga 487  Q
    |||||||||||| |||||  ||||| ||| |||||||||||||| |   | |||  ||||  | | ||| ||||||||| |||| |||||||   |||||    
T  10422947 ctccggtcactaatataagcaaaaatttaatttttagattcattcattaaatgacgtatgtaaactttattatagactacatacgtcatttaacgaatga 10422848  T
Q  488 atttaaaaaataattttttgcttataatagtggccggagga 528  Q
    || |||||| ||| |||||||||||| ||||| ||||||||    
T  10422847 atctaaaaattaaatttttgcttatattagtgaccggagga 10422807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 391 - 519
Target Start/End: Complemental strand, 44182657 - 44182530
Alignment:
Q  391 cggtcactattataattaaaaacttactttttagattcattgaacgattgatatatgagatcattaatatagactatatacatcatttattcaatgaatt 490  Q
    ||||||||||||||||  |||||  |||||||| ||||||||||  | |||| |||  | ||   ||||  ||||  ||||||||||||||||||||| |    
T  44182657 cggtcactattataatcgaaaacaaactttttatattcattgaataaatgatgtatttggtctacaataacgacttgatacatcatttattcaatgaa-t 44182559  T
Q  491 taaaaaataattttttgcttataatagtg 519  Q
     |||||||  |||||||||||||||||||    
T  44182558 caaaaaattgttttttgcttataatagtg 44182530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 460 - 527
Target Start/End: Complemental strand, 15051150 - 15051083
Alignment:
Q  460 tagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggagg 527  Q
    ||||| |||||||||||||||| |||| || ||||| |||| |||||||||||| | ||| |||||||    
T  15051150 tagacaatatacatcatttattgaatgtatctaaaacataaatttttgcttatatttgtgaccggagg 15051083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 468 - 519
Target Start/End: Complemental strand, 20559657 - 20559606
Alignment:
Q  468 atacatcatttattcaatgaatttaaaaaataattttttgcttataatagtg 519  Q
    |||||||| |||||||||||||||||||| | ||| |||| |||||||||||    
T  20559657 atacatcagttattcaatgaatttaaaaagtgattatttgtttataatagtg 20559606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 468 - 519
Target Start/End: Complemental strand, 47708460 - 47708409
Alignment:
Q  468 atacatcatttattcaatgaatttaaaaaataattttttgcttataatagtg 519  Q
    |||||||| | |||||||||| ||||||| || |||||||||||||||||||    
T  47708460 atacatcactcattcaatgaacttaaaaagtagttttttgcttataatagtg 47708409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 392 - 434
Target Start/End: Complemental strand, 2456716 - 2456674
Alignment:
Q  392 ggtcactattataattaaaaacttactttttagattcattgaa 434  Q
    |||||||||||||| ||||||  ||||||||||||||||||||    
T  2456716 ggtcactattataagtaaaaaactactttttagattcattgaa 2456674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 394 - 488
Target Start/End: Original strand, 3105953 - 3106047
Alignment:
Q  394 tcactattataattaaaaacttactttttagattcattgaacgattgatatatgagatcattaatatagactatatacatcatttattcaatgaa 488  Q
    ||||||||||||  ||||| ||| ||||||| || |||||| || || | |||  || ||||||||||||| | |||||||||||||| ||||||    
T  3105953 tcactattataagcaaaaaattattttttaggtttattgaatgagtgttgtatatgaccattaatatagaccacatacatcatttattgaatgaa 3106047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 457 - 519
Target Start/End: Original strand, 11602837 - 11602899
Alignment:
Q  457 atatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtg 519  Q
    |||||||||| |||||||||||||| ||||||| |||||| | |  ||||| |||||||||||    
T  11602837 atatagactacatacatcatttattgaatgaatctaaaaagtgaacttttgtttataatagtg 11602899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 469 - 527
Target Start/End: Complemental strand, 21886525 - 21886467
Alignment:
Q  469 tacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggagg 527  Q
    ||||||||| ||| ||||||| ||||| |||| ||||||||||||||| || |||||||    
T  21886525 tacatcattaattgaatgaatctaaaatataaatttttgcttataataatgaccggagg 21886467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 393 - 519
Target Start/End: Original strand, 27554503 - 27554629
Alignment:
Q  393 gtcactattataattaaaaacttactttttagattcattgaacgattgatatatgagatcattaatatagactatatacatcatttattcaatgaattta 492  Q
    ||||||| ||||| |||||| ||| ||||||||| |||| ||  | |||| |||| |||| ||| |||| |  | |||||||||| ||| |||| ||||     
T  27554503 gtcactaatataaataaaaatttattttttagatacattcaattaatgatgtatgtgatctttattatatatcacatacatcattaattgaatgtatttt 27554602  T
Q  493 aaaaataattttttgcttataatagtg 519  Q
    |||| ||| |||||||||||| |||||    
T  27554603 aaaagtaaatttttgcttatattagtg 27554629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 459 - 533
Target Start/End: Original strand, 28285461 - 28285535
Alignment:
Q  459 atagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggaggaagtac 533  Q
    |||| ||| |||||||||||| | ||||||||||||||  || |||||||||||| || || |||||||| ||||    
T  28285461 ataggctacatacatcatttaatgaatgaatttaaaaatcaaatttttgcttatattaatgaccggaggatgtac 28285535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 455 - 533
Target Start/End: Complemental strand, 46648417 - 46648339
Alignment:
Q  455 taatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggaggaagtac 533  Q
    ||||| |||||| |||||||||||| | ||||||| ||||||  || |||||||||||| ||||| | |||||| ||||    
T  46648417 taataaagactacatacatcatttaatgaatgaatctaaaaatcaaatttttgcttatattagtgacaggaggatgtac 46648339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 468 - 526
Target Start/End: Complemental strand, 47535029 - 47534971
Alignment:
Q  468 atacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggag 526  Q
    |||||||| | ||| |||||| ||||||| || ||||||||||||||||||| ||||||    
T  47535029 atacatcactcatttaatgaacttaaaaagtagttttttgcttataatagtgaccggag 47534971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 388 - 506
Target Start/End: Original strand, 47712480 - 47712598
Alignment:
Q  388 ctccggtcactattataattaaaaacttactttttagattcattgaacgattgatatatgagatcattaatatagactatatacatcatttattcaatga 487  Q
    |||||| |||||||||||  |||||  || |||| |  ||||||||| || ||||||||    ||||||||||| || | |||||||||||||| |||||    
T  47712480 ctccggccactattataagcaaaaaactatttttgaagttcattgaatgagtgatatatcttgtcattaatataaaccacatacatcatttattaaatga 47712579  T
Q  488 atttaaaaaataatttttt 506  Q
    || |||||| | |||||||    
T  47712580 atctaaaaatttatttttt 47712598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 458 - 527
Target Start/End: Complemental strand, 2360518 - 2360449
Alignment:
Q  458 tatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggagg 527  Q
    ||||||||| |||| ||||||| | ||||||| ||||||  || |||||||||||| ||||| |||||||    
T  2360518 tatagactacatacgtcatttaatgaatgaatctaaaaatcaaatttttgcttatattagtgaccggagg 2360449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 466 - 519
Target Start/End: Complemental strand, 3106007 - 3105954
Alignment:
Q  466 atatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtg 519  Q
    ||||||| || | ||||||| ||  |||||||||||||||||||||||||||||    
T  3106007 atatacaacactcattcaataaacctaaaaaataattttttgcttataatagtg 3105954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 451 - 496
Target Start/End: Original strand, 27115299 - 27115344
Alignment:
Q  451 tcattaatatagactatatacatcatttattcaatgaatttaaaaa 496  Q
    |||||||||||||| | |||||| ||||||||||||||| ||||||    
T  27115299 tcattaatatagaccacatacataatttattcaatgaatctaaaaa 27115344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 419 - 488
Target Start/End: Complemental strand, 32549929 - 32549860
Alignment:
Q  419 ttttagattcattgaacgattgatatatgagatcattaatatagactatatacatcatttattcaatgaa 488  Q
    ||||||||||||| ||  | |||| |||| |||| ||||||||||| | |||||||||||||| ||||||    
T  32549929 ttttagattcattcaataaatgatgtatgtgatctttaatatagaccacatacatcatttattaaatgaa 32549860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 468 - 525
Target Start/End: Original strand, 36502327 - 36502384
Alignment:
Q  468 atacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccgga 525  Q
    |||||||||||||||| | ||| |||||||||  |||||| ||||||||||| |||||    
T  36502327 atacatcatttattcagtaaatctaaaaaatatatttttgtttataatagtgaccgga 36502384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 466 - 519
Target Start/End: Original strand, 37491352 - 37491405
Alignment:
Q  466 atatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtg 519  Q
    |||||||||||||||| ||||||| |||||| |||  ||||| |||||||||||    
T  37491352 atatacatcatttattaaatgaatctaaaaagtaaacttttgattataatagtg 37491405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 468 - 532
Target Start/End: Complemental strand, 2456395 - 2456331
Alignment:
Q  468 atacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggaggaagta 532  Q
    |||||||||| ||||||||||  |||||| ||  ||||||||||||||||||  |||||| ||||    
T  2456395 atacatcattaattcaatgaacctaaaaagtagatttttgcttataatagtgatcggagggagta 2456331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 476 - 532
Target Start/End: Original strand, 2456670 - 2456726
Alignment:
Q  476 tttattcaatgaatttaaaaaataattttttgcttataatagtggccggaggaagta 532  Q
    |||||||||||||| |||||| || |||||| |||||||||||| || |||| ||||    
T  2456670 tttattcaatgaatctaaaaagtagttttttacttataatagtgaccagagggagta 2456726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 456 - 496
Target Start/End: Original strand, 2610260 - 2610300
Alignment:
Q  456 aatatagactatatacatcatttattcaatgaatttaaaaa 496  Q
    ||||||||||| ||||||||||||| ||||||||| |||||    
T  2610260 aatatagactaaatacatcatttatgcaatgaattaaaaaa 2610300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 456 - 496
Target Start/End: Complemental strand, 7456494 - 7456454
Alignment:
Q  456 aatatagactatatacatcatttattcaatgaatttaaaaa 496  Q
    ||||||||||| ||||||||||||| |||||||| ||||||    
T  7456494 aatatagactagatacatcatttatacaatgaatctaaaaa 7456454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 459 - 527
Target Start/End: Complemental strand, 10095787 - 10095719
Alignment:
Q  459 atagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggagg 527  Q
    |||||| | |||||||||||| | ||||||| |||||  | | |||||||||||||||||| |||||||    
T  10095787 atagaccacatacatcatttaatgaatgaatctaaaatgttaatttttgcttataatagtgaccggagg 10095719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 455 - 527
Target Start/End: Original strand, 12274877 - 12274949
Alignment:
Q  455 taatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggagg 527  Q
    |||||||||| | |||||| || |||| ||||||| |||||| ||  |||||||||||||||||  |||||||    
T  12274877 taatatagaccacatacattatatattgaatgaatctaaaaagtacatttttgcttataatagttaccggagg 12274949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 460 - 496
Target Start/End: Complemental strand, 16861583 - 16861547
Alignment:
Q  460 tagactatatacatcatttattcaatgaatttaaaaa 496  Q
    |||||||||||||||| ||||||||||||| ||||||    
T  16861583 tagactatatacatcaattattcaatgaatctaaaaa 16861547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 439 - 495
Target Start/End: Original strand, 18819983 - 18820039
Alignment:
Q  439 tgatatatgagatcattaatatagactatatacatcatttattcaatgaatttaaaa 495  Q
    |||||||||  ||| ||||||||||| | |||||||||||||| ||||||| |||||    
T  18819983 tgatatatgtaatctttaatatagacaacatacatcatttattgaatgaatctaaaa 18820039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 463 - 519
Target Start/End: Complemental strand, 19688163 - 19688107
Alignment:
Q  463 actatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtg 519  Q
    |||| |||||||||||||| ||||||  |||||  || |||||||||||||||||||    
T  19688163 actacatacatcatttattgaatgaacctaaaatgtatttttttgcttataatagtg 19688107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 468 - 516
Target Start/End: Original strand, 21387657 - 21387705
Alignment:
Q  468 atacatcatttattcaatgaatttaaaaaataattttttgcttataata 516  Q
    |||||||||||||| ||||||| |||||| |||  ||||||||||||||    
T  21387657 atacatcatttattaaatgaatctaaaaagtaaaattttgcttataata 21387705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 463 - 535
Target Start/End: Complemental strand, 21857133 - 21857061
Alignment:
Q  463 actatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggaggaagtacta 535  Q
    |||| |||||| | ||||||||||  | |||||| |||  ||||||||||||||||| ||||||| |||||||    
T  21857133 actagatacattaattattcaatgtgtctaaaaagtaaacttttgcttataatagtgaccggagggagtacta 21857061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 456 - 496
Target Start/End: Original strand, 24163342 - 24163382
Alignment:
Q  456 aatatagactatatacatcatttattcaatgaatttaaaaa 496  Q
    ||||||||| ||||||||||||||| ||||||||| |||||    
T  24163342 aatatagaccatatacatcatttatgcaatgaattaaaaaa 24163382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 455 - 519
Target Start/End: Original strand, 30138856 - 30138920
Alignment:
Q  455 taatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtg 519  Q
    ||||| ||||||||||||||||| ||| ||||||| |||||  ||| ||||| ||||||| ||||    
T  30138856 taataaagactatatacatcattaattgaatgaatctaaaatgtaaatttttacttataacagtg 30138920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 457 - 533
Target Start/End: Original strand, 30457800 - 30457876
Alignment:
Q  457 atatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggaggaagtac 533  Q
    |||||||| | ||||| |||||||| |||||||||||||| | |  |||| ||||||||||||  ||||| ||||||    
T  30457800 atatagacaacatacaacatttattgaatgaatttaaaaagtgaacttttacttataatagtgatcggagaaagtac 30457876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 461 - 525
Target Start/End: Complemental strand, 31813477 - 31813413
Alignment:
Q  461 agactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccgga 525  Q
    |||| |||||||||||| ||| ||||||| |||||  ||| |||||| ||||||||||| |||||    
T  31813477 agaccatatacatcattaattgaatgaatctaaaatgtaaatttttgtttataatagtgaccgga 31813413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 455 - 527
Target Start/End: Original strand, 34703511 - 34703583
Alignment:
Q  455 taatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggagg 527  Q
    ||||| |||| |||||||||||| ||| |||| || |||||| | | |||||||||||| ||||| |||||||    
T  34703511 taataaagaccatatacatcattaattgaatgtatctaaaaagtgaatttttgcttatattagtgaccggagg 34703583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 468 - 532
Target Start/End: Complemental strand, 34840673 - 34840609
Alignment:
Q  468 atacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggaggaagta 532  Q
    |||||||||||||| ||||||| |||||| | |  |||||||||||||| || ||||||| ||||    
T  34840673 atacatcatttattgaatgaatctaaaaagtgaacttttgcttataataatgaccggagggagta 34840609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 456 - 528
Target Start/End: Original strand, 36547655 - 36547727
Alignment:
Q  456 aatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggagga 528  Q
    ||||||||| | ||||| |||||| | ||||||  || ||||| | |||||||||||||||||| ||||||||    
T  36547655 aatatagaccacatacaacatttaatgaatgaacctagaaaatgaatttttgcttataatagtgaccggagga 36547727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 416 - 496
Target Start/End: Complemental strand, 41395777 - 41395697
Alignment:
Q  416 actttttagattcattgaacgattgatatatgagatcattaatatagactatatacatcatttattcaatgaatttaaaaa 496  Q
    ||||||||||||||| |||  ||| ||||||   || || ||||||||||| |||||||| |||| ||||||||| |||||    
T  41395777 actttttagattcatagaataattaatatatcttattataaatatagactagatacatcacttatacaatgaattaaaaaa 41395697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 49; Significance: 1e-18; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 388 - 524
Target Start/End: Original strand, 13654510 - 13654645
Alignment:
Q  388 ctccggtcactattataattaaaaacttactttttagattcattgaacgattgatatatgagatcattaatatagactatatacatcatttattcaatga 487  Q
    |||||||||||||||||| |||| | | ||||||||| |||||| ||  | |||| |||| | ||  || ||||||||| |||||||||||||| |||||    
T  13654510 ctccggtcactattataagtaaatattgactttttaggttcattcaataaatgatgtatgtggtccata-tatagactaaatacatcatttattgaatga 13654608  T
Q  488 atttaaaaaataattttttgcttataatagtggccgg 524  Q
    ||||||||| | | |||||||||||||||||| ||||    
T  13654609 atttaaaaagtgaatttttgcttataatagtgaccgg 13654645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 394 - 532
Target Start/End: Original strand, 1098635 - 1098772
Alignment:
Q  394 tcactattataattaaaaacttactttttagattcattgaacgattgatatatgagatcattaatatagactatatacatcatttattcaatgaatttaa 493  Q
    |||||||||||| |||||  | |||||||||||||||| ||  | |||| |||| | ||  || ||||||||| |||||| ||||||| ||||||| |||    
T  1098635 tcactattataagtaaaagttgactttttagattcattcaataaatgatgtatgtggtctata-tatagactacatacattatttattaaatgaatctaa 1098733  T
Q  494 aaaataattttttgcttataatagtggccggaggaagta 532  Q
    |||||||  ||||||||||||||||| ||||||| ||||    
T  1098734 aaaataaacttttgcttataatagtgaccggagggagta 1098772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 394 - 519
Target Start/End: Complemental strand, 3100538 - 3100413
Alignment:
Q  394 tcactattataattaaaaacttactttttagattcattgaacgattgatatatgagatcattaatatagactatatacatcatttattcaatgaatttaa 493  Q
    |||||||||||| | |||| |||| ||||||||||||| ||  | |||| |||  |||| ||| ||||||||| |||||||||||||| ||||||| |||    
T  3100538 tcactattataagtgaaaatttacattttagattcattcaattaatgatgtatatgatctttattatagactacatacatcatttattgaatgaatctaa 3100439  T
Q  494 aaaataattttttgcttataatagtg 519  Q
    ||  | | ||||||||||||||||||    
T  3100438 aatgttaatttttgcttataatagtg 3100413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 454 - 506
Target Start/End: Original strand, 27094313 - 27094365
Alignment:
Q  454 ttaatatagactatatacatcatttattcaatgaatttaaaaaataatttttt 506  Q
    ||||||||||| |||||||| |||||||||||||||||||||||||| |||||    
T  27094313 ttaatatagaccatatacataatttattcaatgaatttaaaaaataaattttt 27094365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 456 - 518
Target Start/End: Original strand, 238795 - 238857
Alignment:
Q  456 aatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagt 518  Q
    |||||||| || |||||||||||||||||||||| |||||||| | ||||||| |||||||||    
T  238795 aatatagattacatacatcatttattcaatgaatataaaaaatgaatttttgcctataatagt 238857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 391 - 524
Target Start/End: Original strand, 892555 - 892688
Alignment:
Q  391 cggtcactattataattaaaaacttactttttagattcattgaacgattgatatatgagatcattaatatagactatatacatcatttattcaatgaatt 490  Q
    |||| ||||||||||  ||||| | |||||||||||||||||||  ||| || |||  | ||  || |||| |||| |||||||  ||||||||||||||    
T  892555 cggttactattataagcaaaaattcactttttagattcattgaataattaatgtatttgttctatactatatactagatacatccgttattcaatgaatt 892654  T
Q  491 taaaaaataattttttgcttataatagtggccgg 524  Q
    | |||| ||| |||||||||||||| ||| ||||    
T  892655 ttaaaagtaaatttttgcttataattgtgaccgg 892688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 458 - 519
Target Start/End: Complemental strand, 14107598 - 14107537
Alignment:
Q  458 tatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtg 519  Q
    ||||||||| ||| |||||||||||||||||||| |||||||   |||||||||||||||||    
T  14107598 tatagactaaataaatcatttattcaatgaatttgaaaaatagaattttgcttataatagtg 14107537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 457 - 518
Target Start/End: Original strand, 15311928 - 15311989
Alignment:
Q  457 atatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagt 518  Q
    ||||||| ||||||||||||||||| ||||||| |||||||||  ||||| |||||||||||    
T  15311928 atatagattatatacatcatttattaaatgaatctaaaaaatagatttttccttataatagt 15311989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 450 - 532
Target Start/End: Original strand, 32911555 - 32911638
Alignment:
Q  450 atcattaatatagactatatacatcatttattcaatgaatttaaaaaata-attttttgcttataatagtggccggaggaagta 532  Q
    ||||||| ||||||||| |||||||||||| | ||||||  |||||| |  |||||||||||||||||||| || |||||||||    
T  32911555 atcattattatagactaaatacatcatttaatgaatgaacctaaaaagttgattttttgcttataatagtgaccagaggaagta 32911638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 457 - 532
Target Start/End: Complemental strand, 40100157 - 40100082
Alignment:
Q  457 atatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggaggaagta 532  Q
    |||||||| | | |||||||||||| |||||||||||||| | | ||||||||||||||||||  |||||| ||||    
T  40100157 atatagaccacacacatcatttattaaatgaatttaaaaagtcaatttttgcttataatagtgaacggagggagta 40100082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 457 - 519
Target Start/End: Complemental strand, 27895967 - 27895905
Alignment:
Q  457 atatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtg 519  Q
    |||||||||| |||||||||||||| ||||||| |||||||| |  ||||| |||||||||||    
T  27895967 atatagactacatacatcatttattaaatgaatctaaaaaatgaacttttgtttataatagtg 27895905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 466 - 527
Target Start/End: Complemental strand, 71320 - 71259
Alignment:
Q  466 atatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggagg 527  Q
    |||||||||||| ||| ||||||| ||||| |||  |||||||||||||||||| |||||||    
T  71320 atatacatcattaattgaatgaatctaaaatatagatttttgcttataatagtgaccggagg 71259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 458 - 527
Target Start/End: Complemental strand, 5504446 - 5504377
Alignment:
Q  458 tatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggagg 527  Q
    ||||||| | |||||||||||| | ||||||||||||| | ||  ||||||||||||||||| |||||||    
T  5504446 tatagaccaaatacatcatttaatgaatgaatttaaaatacaaaattttgcttataatagtgcccggagg 5504377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 455 - 524
Target Start/End: Original strand, 14772614 - 14772683
Alignment:
Q  455 taatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccgg 524  Q
    ||||| ||||||||||||||||| ||| ||| ||| ||||| ||||  ||||||||||||||||| ||||    
T  14772614 taataaagactatatacatcattaattgaattaatctaaaatataaagttttgcttataatagtgaccgg 14772683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 468 - 513
Target Start/End: Original strand, 30780151 - 30780196
Alignment:
Q  468 atacatcatttattcaatgaatttaaaaaataattttttgcttata 513  Q
    |||||||||||||| ||||||||||||| |||| ||||||||||||    
T  30780151 atacatcatttattgaatgaatttaaaacataaatttttgcttata 30780196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 388 - 525
Target Start/End: Complemental strand, 42910851 - 42910714
Alignment:
Q  388 ctccggtcactattataattaaaaacttactttttagattcattgaacgattgatatatgagatcattaatatagactatatacatcatttattcaatga 487  Q
    |||||||||||||||||| |||||   |||||||||| || |||||| || ||||  ||| |  |||| |||||||| | || ||||||||||||||| |    
T  42910851 ctccggtcactattataagtaaaatactactttttaggtttattgaatgagtgatgaatgtggccatttatatagaccacatgcatcatttattcaataa 42910752  T
Q  488 atttaaaaaataattttttgcttataatagtggccgga 525  Q
       |||||| || ||||||  ||||||||||| |||||    
T  42910751 tcctaaaaagtagttttttatttataatagtgaccgga 42910714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 392 - 532
Target Start/End: Original strand, 13391536 - 13391676
Alignment:
Q  392 ggtcactattataattaaaaacttactttttagattcattgaacgattgatatatgagatcattaatatagactatatacatcatttattcaatgaattt 491  Q
    |||||||||||||| |||||    |||||||||||||||| ||  | |||| |||  | ||| |||||||||||| |||||| ||||||| ||||||  |    
T  13391536 ggtcactattataagtaaaagtcaactttttagattcattcaataaatgatgtatttggtcaataatatagactaaatacataatttattgaatgaacct 13391635  T
Q  492 aaaaaataattttttgcttataatagtggccggaggaagta 532  Q
    ||||| |   ||||||||||||| |||| | ||||| ||||    
T  13391636 aaaaagttgatttttgcttataacagtgacaggagggagta 13391676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 457 - 513
Target Start/End: Original strand, 17768077 - 17768133
Alignment:
Q  457 atatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttata 513  Q
    |||||||| | |||||| || |||||||||||  |||||||||||||||||||||||    
T  17768077 atatagaccaaatacattatgtattcaatgaacctaaaaaataattttttgcttata 17768133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 388 - 527
Target Start/End: Complemental strand, 26300250 - 26300111
Alignment:
Q  388 ctccggtcactattataattaaaaacttactttttagattcattgaacgattgatatatgagatcat-taatatagactatatacatcatttattcaatg 486  Q
    |||||||||||| ||||| |||||  ||||||||||||| |||| ||  | |||| |||  || ||| ||||| |||| | |||||||||| ||| ||||    
T  26300250 ctccggtcactaatataagtaaaattttactttttagatacattcaattaatgatgtatatga-catataataaagaccacatacatcattaattgaatg 26300152  T
Q  487 aatttaaaaaataattttttgcttataatagtggccggagg 527  Q
     || |||||| ||| |||||||||||| ||||| |||||||    
T  26300151 tatctaaaaagtaaatttttgcttatattagtgaccggagg 26300111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 468 - 532
Target Start/End: Complemental strand, 28499841 - 28499777
Alignment:
Q  468 atacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggaggaagta 532  Q
    |||||| | ||||||||||||| |||||||| |||||||||||||||  ||| ||||||| ||||    
T  28499841 atacattagttattcaatgaatctaaaaaattattttttgcttataaatgtgaccggagggagta 28499777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 457 - 536
Target Start/End: Complemental strand, 1098698 - 1098619
Alignment:
Q  457 atatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggaggaagtactat 536  Q
    |||||||| | |||||||||||||| ||||||| |||||| | |  |||| ||||||||||||   ||||||||||||||    
T  1098698 atatagaccacatacatcatttattgaatgaatctaaaaagtcaacttttacttataatagtgattggaggaagtactat 1098619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 468 - 527
Target Start/End: Original strand, 13356218 - 13356277
Alignment:
Q  468 atacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggagg 527  Q
    |||||||||||||| |||||| ||||||| ||  ||||||||||||||| || |||||||    
T  13356218 atacatcatttattgaatgaacttaaaaagtagatttttgcttataataatgaccggagg 13356277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 468 - 527
Target Start/End: Original strand, 25792927 - 25792986
Alignment:
Q  468 atacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggagg 527  Q
    |||||||||||| | ||||||  |||||| ||| |||||||||||||||||| |||||||    
T  25792927 atacatcatttaatgaatgaacctaaaaagtaaatttttgcttataatagtgaccggagg 25792986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 456 - 518
Target Start/End: Complemental strand, 33867996 - 33867933
Alignment:
Q  456 aatatagactatatacatcatttattcaatgaatttaaaa-aataattttttgcttataatagt 518  Q
    |||| |||||||||| |||||| ||| ||||||| ||||| ||| |||||||||||||||||||    
T  33867996 aataaagactatatatatcattaattgaatgaatataaaataatgattttttgcttataatagt 33867933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 455 - 513
Target Start/End: Complemental strand, 5004036 - 5003978
Alignment:
Q  455 taatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttata 513  Q
    |||||||||||| |||||||| |||||||||||| || |||||  | ||||||||||||    
T  5004036 taatatagactaaatacatcagttattcaatgaaattgaaaaaacaatttttgcttata 5003978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 458 - 532
Target Start/End: Complemental strand, 5240295 - 5240221
Alignment:
Q  458 tatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggaggaagta 532  Q
    |||| |||| |||||| | |||||||||| || |||||||| |  ||||||||||||||||| ||||||| ||||    
T  5240295 tatatactagatacattaattattcaatgtatctaaaaaatcaaattttgcttataatagtgaccggagggagta 5240221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 467 - 513
Target Start/End: Original strand, 12646584 - 12646630
Alignment:
Q  467 tatacatcatttattcaatgaatttaaaaaataattttttgcttata 513  Q
    ||||||||||||||| ||||||| |||||| ||| ||||||||||||    
T  12646584 tatacatcatttattaaatgaatctaaaaagtaaatttttgcttata 12646630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 525
Target Start/End: Complemental strand, 25358114 - 25358060
Alignment:
Q  471 catcatttattcaatgaatttaaaaaataattttttgcttataatagtggccgga 525  Q
    ||||||||||| ||||||| | |||||||| ||||| |||||||||||| |||||    
T  25358114 catcatttattgaatgaatcttaaaaataaatttttacttataatagtgaccgga 25358060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 455 - 517
Target Start/End: Original strand, 30371401 - 30371463
Alignment:
Q  455 taatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatag 517  Q
    ||||| |||| |||||||  ||| ||| ||||||| ||||| |||||||||||||||||||||    
T  30371401 taataaagaccatatacaatattaattaaatgaatctaaaatataattttttgcttataatag 30371463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 465 - 519
Target Start/End: Original strand, 32398081 - 32398135
Alignment:
Q  465 tatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtg 519  Q
    ||||||||||||| ||| ||||||||||||| |||  |||||| |||||||||||    
T  32398081 tatatacatcattaattgaatgaatttaaaatatagatttttgtttataatagtg 32398135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 468 - 518
Target Start/End: Complemental strand, 36897801 - 36897751
Alignment:
Q  468 atacatcatttattcaatgaatttaaaaaataattttttgcttataatagt 518  Q
    |||||||||||||| |||||||||||||  ||| ||||| |||||||||||    
T  36897801 atacatcatttatttaatgaatttaaaatgtaaatttttacttataatagt 36897751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 463 - 532
Target Start/End: Original strand, 40100162 - 40100232
Alignment:
Q  463 actatatacatcatttattcaatgaatttaaaaaa-taattttttgcttataatagtggccggaggaagta 532  Q
    |||| |||||||||||| | ||||||| ||||||| | | |||||||||||||||||| ||||||| ||||    
T  40100162 actacatacatcatttactgaatgaatctaaaaaaatgaatttttgcttataatagtgaccggagggagta 40100232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 458 - 527
Target Start/End: Complemental strand, 1996916 - 1996847
Alignment:
Q  458 tatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggagg 527  Q
    ||||||||| |||| ||||||| | ||||||| ||||||  || |||||||||||| ||||| |||||||    
T  1996916 tatagactacatacgtcatttaatgaatgaatctaaaaatcaaatttttgcttatattagtgaccggagg 1996847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 455 - 532
Target Start/End: Complemental strand, 7613430 - 7613353
Alignment:
Q  455 taatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggaggaagta 532  Q
    |||||||||||| ||||  |||||| | |||||| ||||||| |   |||||||||||||||||| |||||| |||||    
T  7613430 taatatagactaaatactgcatttaatgaatgaacttaaaaagttgatttttgcttataatagtgaccggagaaagta 7613353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 416 - 485
Target Start/End: Original strand, 15969101 - 15969170
Alignment:
Q  416 actttttagattcattgaacgattgatatatgagatcattaatatagactatatacatcatttattcaat 485  Q
    ||||||||||| |||||||   |||||||||  ||||  |||||||||| |||||||||| |||||||||    
T  15969101 actttttagatgcattgaatacttgatatatctgatctataatatagaccatatacatcagttattcaat 15969170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 468 - 513
Target Start/End: Original strand, 25408624 - 25408669
Alignment:
Q  468 atacatcatttattcaatgaatttaaaaaataattttttgcttata 513  Q
    |||||||||||||| ||||||| ||||| |||| ||||||||||||    
T  25408624 atacatcatttattgaatgaatctaaaacataaatttttgcttata 25408669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 458 - 527
Target Start/End: Complemental strand, 27314544 - 27314475
Alignment:
Q  458 tatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggagg 527  Q
    ||||||||| |||| ||||||| | ||||||| ||||||  || |||||||||||| ||||| |||||||    
T  27314544 tatagactacatacgtcatttaatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagg 27314475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 455 - 496
Target Start/End: Original strand, 39785129 - 39785170
Alignment:
Q  455 taatatagactatatacatcatttattcaatgaatttaaaaa 496  Q
    |||||||||| | |||||||||||||| ||||||||||||||    
T  39785129 taatatagaccacatacatcatttattgaatgaatttaaaaa 39785170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 457 - 505
Target Start/End: Complemental strand, 3662407 - 3662359
Alignment:
Q  457 atatagactatatacatcatttattcaatgaatttaaaaaataattttt 505  Q
    |||||||||| |||||||||||||| |||||| ||||||| ||| ||||    
T  3662407 atatagactaaatacatcatttattaaatgaacttaaaaattaaatttt 3662359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 457 - 513
Target Start/End: Original strand, 12645418 - 12645474
Alignment:
Q  457 atatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttata 513  Q
    |||||||| | |||||| || ||||||||||| ||||||| || |||||||||||||    
T  12645418 atatagaccaaatacattatgtattcaatgaacttaaaaagtatttttttgcttata 12645474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 458 - 518
Target Start/End: Original strand, 14303098 - 14303158
Alignment:
Q  458 tatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagt 518  Q
    ||||||| | |||||| ||||||| |||||||||||| ||| | |||||| ||||||||||    
T  14303098 tatagacaacatacattatttattgaatgaatttaaagaatgaatttttgtttataatagt 14303158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 468 - 528
Target Start/End: Original strand, 17153504 - 17153564
Alignment:
Q  468 atacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggagga 528  Q
    ||||||||||||   ||||||||||||| |||  |||||| ||||||||||| ||||||||    
T  17153504 atacatcatttaacgaatgaatttaaaatatagatttttgtttataatagtgaccggagga 17153564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 478 - 514
Target Start/End: Complemental strand, 19087827 - 19087791
Alignment:
Q  478 tattcaatgaatttaaaaaataattttttgcttataa 514  Q
    |||||||||||| ||||||||| ||||||||||||||    
T  19087827 tattcaatgaatataaaaaatatttttttgcttataa 19087791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 468 - 516
Target Start/End: Original strand, 23262515 - 23262563
Alignment:
Q  468 atacatcatttattcaatgaatttaaaaaataattttttgcttataata 516  Q
    |||||||||||||| ||||||||||||||||    ||||||||||||||    
T  23262515 atacatcatttatttaatgaatttaaaaaattgaattttgcttataata 23262563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 419 - 527
Target Start/End: Complemental strand, 25408651 - 25408543
Alignment:
Q  419 ttttagattcattgaacgattgatatatgagatcattaatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagt 518  Q
    ||||||||||||| ||  | |||| |||| | || ||| | ||||| | |||||||||||||| ||||||| ||||| || | |||||||||||| | ||    
T  25408651 ttttagattcattcaataaatgatgtatgtggtctttattgtagacaacatacatcatttattgaatgaatctaaaatatgaatttttgcttatatttgt 25408552  T
Q  519 ggccggagg 527  Q
    | |||||||    
T  25408551 gaccggagg 25408543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 455 - 519
Target Start/End: Complemental strand, 35942144 - 35942080
Alignment:
Q  455 taatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtg 519  Q
    |||||||||||| |||| | ||||||| ||| || ||||| |||||  |||||||||||||||||    
T  35942144 taatatagactacatacgtaatttattgaataaacttaaagaataaagttttgcttataatagtg 35942080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 49; Significance: 1e-18; HSPs: 68)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 416 - 532
Target Start/End: Original strand, 22235289 - 22235405
Alignment:
Q  416 actttttagattcattgaacgattgatatatgagatcattaatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataat 515  Q
    ||||||||| ||| |||||  ||||||||||  |||| |||||||| || | |||||||| ||||||||||||| |||||  | ||||||||||||||||    
T  22235289 actttttaggttctttgaataattgatatatttgatctttaatataaaccagatacatcagttattcaatgaatctaaaatgtgattttttgcttataat 22235388  T
Q  516 agtggccggaggaagta 532  Q
    |||| ||||||| ||||    
T  22235389 agtgaccggagggagta 22235405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 418 - 519
Target Start/End: Original strand, 31089917 - 31090020
Alignment:
Q  418 tttttagattcattgaacgattgatatatgagatcattaatatagactatatacatcatttattcaatgaatttaaaaaataat--tttttgcttataat 515  Q
    ||||||| ||||||||| || |||| |||| || ||||||||||||| | |||||||||||||||||||||| |||||| || |  ||||||||||||||    
T  31089917 tttttaggttcattgaatgagtgatgtatgtgaccattaatatagaccacatacatcatttattcaatgaatctaaaaagtagttctttttgcttataat 31090016  T
Q  516 agtg 519  Q
    ||||    
T  31090017 agtg 31090020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 392 - 506
Target Start/End: Complemental strand, 49229301 - 49229187
Alignment:
Q  392 ggtcactattataattaaaaacttactttttagattcattgaacgattgatatatgagatcattaatatagactatatacatcatttattcaatgaattt 491  Q
    |||||||| ||||| |||||| | | ||||||| || |||||| || |||||||||  | |||||||||| || |  |||||||||||||||||||||||    
T  49229301 ggtcactactataagtaaaaaataattttttaggtttattgaatgaatgatatatgtaaacattaatatataccacgtacatcatttattcaatgaattt 49229202  T
Q  492 aaaaaataatttttt 506  Q
    |||||||| ||||||    
T  49229201 aaaaaatattttttt 49229187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 389 - 528
Target Start/End: Original strand, 29006837 - 29006976
Alignment:
Q  389 tccggtcactattataattaaaaacttactttttagattcattgaacgattgatatatgagatc-attaatatagactatatacatcatttattcaatga 487  Q
    |||||||||||||||||  |||||  || |||||||||||||| ||  | |||| |||| |||| ||||| |||||| | |||||||||||||| |||||    
T  29006837 tccggtcactattataagcaaaaatctattttttagattcattcaataaatgatgtatgtgatccattaa-atagaccacatacatcatttattgaatga 29006935  T
Q  488 atttaaaaaataattttttgcttataatagtggccggagga 528  Q
    ||||||||| |    ||||||||||||||||| ||||||||    
T  29006936 atttaaaaagtggaattttgcttataatagtgaccggagga 29006976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 391 - 532
Target Start/End: Original strand, 11796589 - 11796729
Alignment:
Q  391 cggtcactattataattaaaaacttactttttagattcattgaacgattgatatatgagatcatta-atatagactatatacatcatttattcaatgaat 489  Q
    |||||||||||||||  ||||  | ||||||| |||||||| || || ||||||||| | |  ||| ||||||| || |||||||||||||| ||| |||    
T  11796589 cggtcactattataagcaaaagttgactttttcgattcattcaatgaatgatatatgtggt--ttatatatagattacatacatcatttattgaataaat 11796686  T
Q  490 ttaaaaaataattttttgcttataatagtggccggaggaagta 532  Q
     |||||| | | |||||||||||||||||||||| ||||||||    
T  11796687 ctaaaaagtgaatttttgcttataatagtggccgaaggaagta 11796729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 465 - 519
Target Start/End: Original strand, 21208652 - 21208706
Alignment:
Q  465 tatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtg 519  Q
    ||||||||||| ||||||||||||  |||||||||||||||||||||||||||||    
T  21208652 tatatacatcacttattcaatgaacctaaaaaataattttttgcttataatagtg 21208706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 389 - 518
Target Start/End: Complemental strand, 5816677 - 5816548
Alignment:
Q  389 tccggtcactattataattaaaaacttactttttagattcattgaacgattgatatatgagatcattaatatagactatatacatcatttattcaatgaa 488  Q
    ||||||||||||||||| |||||  || | ||||||||||||| |   | ||||||||| ||||  ||||| |||  |||||||||||| ||| ||||||    
T  5816677 tccggtcactattataaataaaactttgcattttagattcattcattaaatgatatatgtgatctataataaagatcatatacatcattaattaaatgaa 5816578  T
Q  489 tttaaaaaataattttttgcttataatagt 518  Q
    ||||||| | ||  ||||||||||||||||    
T  5816577 tttaaaatacaaagttttgcttataatagt 5816548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 460 - 519
Target Start/End: Complemental strand, 3094334 - 3094275
Alignment:
Q  460 tagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtg 519  Q
    ||||| |||||||||||||||| ||||||| |||||||||| |||||| |||||||||||    
T  3094334 tagaccatatacatcatttattgaatgaatataaaaaataaatttttgtttataatagtg 3094275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 468 - 527
Target Start/End: Original strand, 54164894 - 54164953
Alignment:
Q  468 atacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggagg 527  Q
    |||||||||||||| ||||||| |||||||||  |||||||||||||||||| |||||||    
T  54164894 atacatcatttattgaatgaatctaaaaaatagatttttgcttataatagtgaccggagg 54164953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 388 - 434
Target Start/End: Complemental strand, 56257474 - 56257428
Alignment:
Q  388 ctccggtcactattataattaaaaacttactttttagattcattgaa 434  Q
    |||||||||||||||||| |||||| |||||||||||||||||||||    
T  56257474 ctccggtcactattataagtaaaaagttactttttagattcattgaa 56257428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 457 - 518
Target Start/End: Original strand, 2254023 - 2254084
Alignment:
Q  457 atatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagt 518  Q
    |||||||||| ||| |||||||||| ||||||||||||||||||  ||||| ||||||||||    
T  2254023 atatagactacatatatcatttattgaatgaatttaaaaaataaacttttgtttataatagt 2254084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 468 - 525
Target Start/End: Original strand, 6462793 - 6462850
Alignment:
Q  468 atacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccgga 525  Q
    |||||||||||||| ||||||| ||||||||||  ||||| |||||||||||||||||    
T  6462793 atacatcatttattgaatgaatctaaaaaataaaattttgtttataatagtggccgga 6462850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 468 - 525
Target Start/End: Complemental strand, 29006894 - 29006837
Alignment:
Q  468 atacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccgga 525  Q
    |||||||||||||| ||||||| |||||||||  |||||||||||||||||| |||||    
T  29006894 atacatcatttattgaatgaatctaaaaaatagatttttgcttataatagtgaccgga 29006837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 466 - 519
Target Start/End: Complemental strand, 38539539 - 38539486
Alignment:
Q  466 atatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtg 519  Q
    |||||||||||||||| ||| ||||||||| |||| ||||||||||||||||||    
T  38539539 atatacatcatttattgaataaatttaaaatataaatttttgcttataatagtg 38539486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 455 - 516
Target Start/End: Original strand, 38949750 - 38949811
Alignment:
Q  455 taatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataata 516  Q
    |||||||||||| |||||||||||||| ||| ||||||||||||| |||||| | |||||||    
T  38949750 taatatagactacatacatcatttattgaataaatttaaaaaatactttttttcatataata 38949811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 468 - 528
Target Start/End: Complemental strand, 38382035 - 38381975
Alignment:
Q  468 atacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggagga 528  Q
    |||||||||||| ||||||||| |||||  ||| |||||||||||||||||| ||||||||    
T  38382035 atacatcatttaatcaatgaatctaaaatgtaaatttttgcttataatagtgaccggagga 38381975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 468 - 528
Target Start/End: Original strand, 48402492 - 48402552
Alignment:
Q  468 atacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggagga 528  Q
    |||||||||||| | ||||||| ||||| |||  |||||||||||||||||||||||||||    
T  48402492 atacatcatttaatgaatgaatctaaaatatagatttttgcttataatagtggccggagga 48402552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 388 - 527
Target Start/End: Complemental strand, 54164952 - 54164813
Alignment:
Q  388 ctccggtcactattataattaaaaacttactttttagattcattgaacgattgatatatgagatc-attaatatagactatatacatcatttattcaatg 486  Q
    ||||||||||||||||||  |||||  || |||||||||||||| ||  | |||| |||| | || ||||| |||||| | |||||||||||||| ||||    
T  54164952 ctccggtcactattataagcaaaaatctattttttagattcattcaataaatgatgtatgtggtccattaa-atagaccacatacatcatttattgaatg 54164854  T
Q  487 aatttaaaaaataattttttgcttataatagtggccggagg 527  Q
    ||| |||||| |    ||||||||||||||||| |||||||    
T  54164853 aatctaaaaagtggaattttgcttataatagtgaccggagg 54164813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 468 - 519
Target Start/End: Original strand, 19934719 - 19934770
Alignment:
Q  468 atacatcatttattcaatgaatttaaaaaataattttttgcttataatagtg 519  Q
    |||||||||||||| ||||||| |||||||||  ||||||||||||||||||    
T  19934719 atacatcatttattgaatgaatctaaaaaatagatttttgcttataatagtg 19934770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 468 - 519
Target Start/End: Original strand, 26636521 - 26636572
Alignment:
Q  468 atacatcatttattcaatgaatttaaaaaataattttttgcttataatagtg 519  Q
    |||||||||||||| ||||||| |||||||||| ||||| ||||||||||||    
T  26636521 atacatcatttattgaatgaatctaaaaaataaatttttacttataatagtg 26636572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 468 - 519
Target Start/End: Complemental strand, 26863157 - 26863106
Alignment:
Q  468 atacatcatttattcaatgaatttaaaaaataattttttgcttataatagtg 519  Q
    |||||||| ||||||||||||||||||| |||| |||||| |||||||||||    
T  26863157 atacatcaattattcaatgaatttaaaatataaatttttgtttataatagtg 26863106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 457 - 519
Target Start/End: Complemental strand, 5535784 - 5535722
Alignment:
Q  457 atatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtg 519  Q
    ||||| |||| |||||||||||||| ||||||| |||||||| | |||||||||||| |||||    
T  5535784 atataaactacatacatcatttattgaatgaatctaaaaaatgagtttttgcttatactagtg 5535722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 457 - 519
Target Start/End: Original strand, 43616215 - 43616277
Alignment:
Q  457 atatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtg 519  Q
    ||||| |||| |||||||||||| | ||||||||||||||||   ||||||||||||||||||    
T  43616215 atatatactaaatacatcatttaataaatgaatttaaaaaattgatttttgcttataatagtg 43616277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 455 - 533
Target Start/End: Complemental strand, 44626234 - 44626156
Alignment:
Q  455 taatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggaggaagtac 533  Q
    |||||||||||| |||||| | |||||||||| || | ||||||||  ||||| ||||||||||| ||||||| |||||    
T  44626234 taatatagactagatacattagttattcaatgtatctgaaaaataaaattttgattataatagtgaccggagggagtac 44626156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 468 - 513
Target Start/End: Complemental strand, 12596735 - 12596690
Alignment:
Q  468 atacatcatttattcaatgaatttaaaaaataattttttgcttata 513  Q
    |||||| ||||||| |||||||||||||||||| ||||||||||||    
T  12596735 atacattatttattaaatgaatttaaaaaataaatttttgcttata 12596690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 394 - 506
Target Start/End: Original strand, 19936502 - 19936612
Alignment:
Q  394 tcactattataattaaaaacttactttttagattcattgaacgattgatatatgagatcattaatatagactatatacatcatttattcaatgaatttaa 493  Q
    ||||||||||||  |||||   |||||||||||||||||||  | | |||||  |  |||||| ||||||||| |||||||||||||||||| ||| |||    
T  19936502 tcactattataaacaaaaatcaactttttagattcattgaataaattatatacaa--tcattattatagactagatacatcatttattcaataaatctaa 19936599  T
Q  494 aaaataatttttt 506  Q
    ||| | |||||||    
T  19936600 aaagttatttttt 19936612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 468 - 516
Target Start/End: Original strand, 7740571 - 7740619
Alignment:
Q  468 atacatcatttattcaatgaatttaaaaaataattttttgcttataata 516  Q
    |||||||||| ||| ||||||||||||| |||| |||||||||||||||    
T  7740571 atacatcattaatttaatgaatttaaaatataaatttttgcttataata 7740619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 388 - 527
Target Start/End: Complemental strand, 19934777 - 19934638
Alignment:
Q  388 ctccggtcactattataattaaaaacttactttttagattcattgaacgattgatatatgagatc-attaatatagactatatacatcatttattcaatg 486  Q
    ||||| ||||||||||||  |||||  || |||||||||||||| ||  | |||| |||| | || ||||| |||||| | |||||||||||||| ||||    
T  19934777 ctccgatcactattataagcaaaaatctattttttagattcattcaataaatgatgtatgtggtccattaa-atagaccacatacatcatttattgaatg 19934679  T
Q  487 aatttaaaaaataattttttgcttataatagtggccggagg 527  Q
    ||| |||||| |    ||||||||||||||||| |||||||    
T  19934678 aatctaaaaagtggaattttgcttataatagtgaccggagg 19934638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 463 - 527
Target Start/End: Original strand, 23568456 - 23568520
Alignment:
Q  463 actatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggagg 527  Q
    ||||||||||||||||| | ||||||| |||||  | | |||||||||||||||||| |||||||    
T  23568456 actatatacatcatttaatgaatgaatctaaaatgttagtttttgcttataatagtgaccggagg 23568520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 468 - 516
Target Start/End: Original strand, 32645575 - 32645623
Alignment:
Q  468 atacatcatttattcaatgaatttaaaaaataattttttgcttataata 516  Q
    |||||||| ||||||||||||| ||||| || |||||||||||||||||    
T  32645575 atacatcaattattcaatgaatctaaaacattattttttgcttataata 32645623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 468 - 528
Target Start/End: Complemental strand, 47181618 - 47181558
Alignment:
Q  468 atacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggagga 528  Q
    |||||||||||| | |||||||||||||  ||  |||||||||||||||||| ||||||||    
T  47181618 atacatcatttaatgaatgaatttaaaatgtagatttttgcttataatagtgaccggagga 47181558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 468 - 512
Target Start/End: Complemental strand, 47234406 - 47234362
Alignment:
Q  468 atacatcatttattcaatgaatttaaaaaataattttttgcttat 512  Q
    |||||| ||||||| ||||||||||||||||||||||||| ||||    
T  47234406 atacataatttattaaatgaatttaaaaaataattttttgtttat 47234362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 390 - 526
Target Start/End: Complemental strand, 54106612 - 54106476
Alignment:
Q  390 ccggtcactattataattaaaaacttactttttagattcattgaacgattgatatatgagatcattaatatagactatatacatcatttattcaatgaat 489  Q
    |||||||| | |||||  ||||| |||  ||||||||||||| ||  | |||| |||| |||| ||| | ||||| | |||||||||||||| |||||||    
T  54106612 ccggtcacaaatataagcaaaaatttatgttttagattcattcaataaatgatgtatgtgatctttattgtagacaacatacatcatttattgaatgaat 54106513  T
Q  490 ttaaaaaataattttttgcttataatagtggccggag 526  Q
     ||||| || | |||||||||||| | ||| ||||||    
T  54106512 ctaaaatatgaatttttgcttatatttgtgaccggag 54106476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 389 - 488
Target Start/End: Complemental strand, 14351401 - 14351302
Alignment:
Q  389 tccggtcactattataattaaaaacttactttttagattcattgaacgattgatatatgagatcattaatatagactatatacatcatttattcaatgaa 488  Q
    |||| |||||||||||| |||||| | | || |||| |||||| ||  | ||||||||| |||||  ||||||||| | |||||||||||||| ||||||    
T  14351401 tccgatcactattataaataaaaattcatttgttaggttcattcaataaatgatatatgtgatcaacaatatagaccacatacatcatttattgaatgaa 14351302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 455 - 514
Target Start/End: Original strand, 17657975 - 17658034
Alignment:
Q  455 taatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataa 514  Q
    |||||||||||| ||| |||||||||| ||||||| ||||||||||  |||| |||||||    
T  17657975 taatatagactacatatatcatttattgaatgaatctaaaaaataaagttttacttataa 17658034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 478 - 533
Target Start/End: Complemental strand, 27990322 - 27990267
Alignment:
Q  478 tattcaatgaatttaaaaaataattttttgcttataatagtggccggaggaagtac 533  Q
    |||||||||||| |||||| |||||||||||||||||  ||| | |||||||||||    
T  27990322 tattcaatgaatctaaaaactaattttttgcttataaatgtgacgggaggaagtac 27990267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 388 - 519
Target Start/End: Original strand, 38381977 - 38382108
Alignment:
Q  388 ctccggtcactattataattaaaaacttactttttagattcattgaacgattgatatatgagatcattaatatagactatatacatcatttattcaatga 487  Q
    ||||||||||||||||||  ||||| |||| |||||||||||||||   | |||| |||| | |   ||||| |||||| |||||||||||| | ||||     
T  38381977 ctccggtcactattataagcaaaaatttacattttagattcattgattaaatgatgtatgtggtttataatacagactacatacatcatttaatgaatgt 38382076  T
Q  488 atttaaaaaataattttttgcttataatagtg 519  Q
    || |||||  |   ||||||||||||||||||    
T  38382077 atctaaaacgttgatttttgcttataatagtg 38382108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 457 - 516
Target Start/End: Complemental strand, 44171504 - 44171445
Alignment:
Q  457 atatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataata 516  Q
    ||||||| || |||||||||||||| |||||||||||||||| |  ||||| ||||||||    
T  44171504 atatagattacatacatcatttattgaatgaatttaaaaaattaacttttgtttataata 44171445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 478 - 516
Target Start/End: Complemental strand, 48002651 - 48002612
Alignment:
Q  478 tattcaatgaatttaaaaaata-attttttgcttataata 516  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  48002651 tattcaatgaatttaaaaaatatattttttgcttataata 48002612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 455 - 534
Target Start/End: Complemental strand, 55936059 - 55935981
Alignment:
Q  455 taatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggaggaagtact 534  Q
    ||||| |||| |||||||||||||| | ||||||| |||||  ||  |||||||||||||||||| |||||||| |||||    
T  55936059 taataaagacgatatacatcatttaatgaatgaatctaaaat-tatgtttttgcttataatagtgaccggaggatgtact 55935981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 457 - 515
Target Start/End: Original strand, 6087503 - 6087561
Alignment:
Q  457 atatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataat 515  Q
    |||||||||| |||||||||||||| ||| ||| | |||| ||| ||||||||||||||    
T  6087503 atatagactacatacatcatttattgaataaatctgaaaattaaatttttgcttataat 6087561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 419 - 513
Target Start/End: Complemental strand, 20598365 - 20598271
Alignment:
Q  419 ttttagattcattgaacgattgatatatgagatcattaatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttata 513  Q
    ||||||||||||| ||  | ||||||||| | || ||| | ||||| |||||||||||||||| |||| || ||||| || | ||||||||||||    
T  20598365 ttttagattcattcaataaatgatatatgtggtctttattgtagacaatatacatcatttattgaatgtatctaaaacatgaatttttgcttata 20598271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 469 - 519
Target Start/End: Original strand, 24798209 - 24798259
Alignment:
Q  469 tacatcatttattcaatgaatttaaaaaataattttttgcttataatagtg 519  Q
    ||||||||||| | ||||||||||||| || | ||||||||||||||||||    
T  24798209 tacatcatttaatgaatgaatttaaaatattaatttttgcttataatagtg 24798259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 457 - 519
Target Start/End: Complemental strand, 37255752 - 37255690
Alignment:
Q  457 atatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtg 519  Q
    |||||||| | |||||||||||||| ||||||| |||||||  |  |||||||||||||||||    
T  37255752 atatagaccacatacatcatttattgaatgaatctaaaaaaccaacttttgcttataatagtg 37255690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 457 - 519
Target Start/End: Original strand, 37255751 - 37255813
Alignment:
Q  457 atatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtg 519  Q
    ||||| |||| |||||| ||||||| |||||||||||||| | |  |||||||||||||||||    
T  37255751 atataaactacatacataatttattgaatgaatttaaaaagtgaacttttgcttataatagtg 37255813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 389 - 538
Target Start/End: Original strand, 40814670 - 40814820
Alignment:
Q  389 tccggtcactattataattaaaaacttact-ttttagattcattgaacgattgatatatgagatcattaatatagactatatacatcatttattcaatga 487  Q
    |||| ||||||||||||||||||  ||| | ||||||||||||| ||| | ||||||||  |||| ||| |||| || | ||| |||||||| | |||||    
T  40814670 tccgatcactattataattaaaatattaatattttagattcattcaactaatgatatatatgatctttattataaaccacatatatcatttaatgaatga 40814769  T
Q  488 atttaaaaaataattttttgcttataatagtggccggaggaagtactatat 538  Q
    || |||||  | | |||||| |||||| |||| ||| |||  |||||||||    
T  40814770 atctaaaatgttaatttttgtttataacagtgaccgaagggtgtactatat 40814820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 468 - 526
Target Start/End: Original strand, 56257416 - 56257474
Alignment:
Q  468 atacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggag 526  Q
    |||||| | ||||||||||||| |||||| ||| ||||| |||||||||||| ||||||    
T  56257416 atacatgagttattcaatgaatctaaaaagtaactttttacttataatagtgaccggag 56257474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 457 - 530
Target Start/End: Original strand, 3740378 - 3740451
Alignment:
Q  457 atatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggaggaag 530  Q
    |||||||||| || ||||||||||| ||||||  |||||| | |  ||||||||||| ||||| ||||||||||    
T  3740378 atatagactacatgcatcatttattgaatgaacctaaaaagtcaacttttgcttatattagtgaccggaggaag 3740451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 468 - 513
Target Start/End: Original strand, 16040042 - 16040086
Alignment:
Q  468 atacatcatttattcaatgaatttaaaaaataattttttgcttata 513  Q
    |||||||||||||| ||||||||| |||||||| ||||||||||||    
T  16040042 atacatcatttattgaatgaattt-aaaaataaatttttgcttata 16040086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 457 - 534
Target Start/End: Complemental strand, 16912509 - 16912432
Alignment:
Q  457 atatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggaggaagtact 534  Q
    |||||||||| |||||||||||||| ||||||| |||||| ||   |||| ||||||||| ||  |||||| ||||||    
T  16912509 atatagactacatacatcatttattgaatgaatctaaaaattacacttttacttataatattgatcggagggagtact 16912432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 455 - 516
Target Start/End: Original strand, 21142158 - 21142219
Alignment:
Q  455 taatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataata 516  Q
    ||||| |||| |||||||||||| ||| ||||||| ||||| ||||  ||||||||||||||    
T  21142158 taataaagaccatatacatcattaattaaatgaatctaaaatataaacttttgcttataata 21142219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 451 - 532
Target Start/End: Original strand, 21790170 - 21790250
Alignment:
Q  451 tcattaatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggaggaagta 532  Q
    ||||||||||| || | ||||||||||||||| || ||  ||||||    ||||||||||||||||||| ||||||||||||    
T  21790170 tcattaatata-accacatacatcatttattcgataaacctaaaaatagtttttttgcttataatagtgtccggaggaagta 21790250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 459 - 516
Target Start/End: Original strand, 31280405 - 31280462
Alignment:
Q  459 atagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataata 516  Q
    |||||||| || ||||||||||| ||||||  |||||||||| |||||| ||||||||    
T  31280405 atagactacattcatcatttattaaatgaacctaaaaaataaatttttgtttataata 31280462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 468 - 525
Target Start/End: Original strand, 35009100 - 35009157
Alignment:
Q  468 atacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccgga 525  Q
    |||||||| ||||| ||| || || ||||||||||||||| ||||||||||| |||||    
T  35009100 atacatcaattattgaataaacttcaaaaataattttttgtttataatagtgaccgga 35009157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 455 - 516
Target Start/End: Complemental strand, 36491097 - 36491037
Alignment:
Q  455 taatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataata 516  Q
    ||||||| |||| ||||||||  |||||||||||| |||||||| | |||||||||||||||    
T  36491097 taatataaactagatacatcaaatattcaatgaatgtaaaaaatga-tttttgcttataata 36491037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 458 - 519
Target Start/End: Original strand, 52914069 - 52914130
Alignment:
Q  458 tatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtg 519  Q
    ||||||| | |||||||||||| | ||||||| ||||| || | ||||||||||||||||||    
T  52914069 tatagaccacatacatcatttaatgaatgaatctaaaatattaatttttgcttataatagtg 52914130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 468 - 513
Target Start/End: Original strand, 54106556 - 54106601
Alignment:
Q  468 atacatcatttattcaatgaatttaaaaaataattttttgcttata 513  Q
    |||||||||||||| ||||||| ||||| |||| ||||||||||||    
T  54106556 atacatcatttattgaatgaatctaaaacataaatttttgcttata 54106601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 468 - 513
Target Start/End: Complemental strand, 54508228 - 54508183
Alignment:
Q  468 atacatcatttattcaatgaatttaaaaaataattttttgcttata 513  Q
    |||||||||||||| ||||||| ||||| |||| ||||||||||||    
T  54508228 atacatcatttattgaatgaatctaaaatataaatttttgcttata 54508183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 456 - 516
Target Start/End: Original strand, 1205155 - 1205215
Alignment:
Q  456 aatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataata 516  Q
    ||||||||||| |||||||| |||  |||||||| |||||||| | ||||| |||||||||    
T  1205155 aatatagactagatacatcacttagacaatgaatataaaaaatcaattttttcttataata 1205215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 468 - 516
Target Start/End: Complemental strand, 2401099 - 2401051
Alignment:
Q  468 atacatcatttattcaatgaatttaaaaaataattttttgcttataata 516  Q
    |||||||||||||| |||||||||||||| | |  ||||||||||||||    
T  2401099 atacatcatttattgaatgaatttaaaaagttaacttttgcttataata 2401051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 416 - 500
Target Start/End: Complemental strand, 3345432 - 3345348
Alignment:
Q  416 actttttagattcattgaacgattgatatatgagatcattaatatagactatatacatcatttattcaatgaatttaaaaaataa 500  Q
    ||||||||| |||||||||  |||||| |||  ||||  || || | || |||||||||| |||||||||||| |||||||||||    
T  3345432 actttttaggttcattgaataattgatgtatctgatccgtattacaaaccatatacatcaattattcaatgaacttaaaaaataa 3345348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 455 - 519
Target Start/End: Original strand, 5418583 - 5418647
Alignment:
Q  455 taatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtg 519  Q
    ||||| |||| | |||||||||| |||||||| || |||||| ||| |||||||||||| |||||    
T  5418583 taataaagaccacatacatcattaattcaatgtatctaaaaagtaaatttttgcttatattagtg 5418647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 454 - 498
Target Start/End: Complemental strand, 5924572 - 5924528
Alignment:
Q  454 ttaatatagactatatacatcatttattcaatgaatttaaaaaat 498  Q
    |||||||||| || |||||| ||||||| ||||||||||||||||    
T  5924572 ttaatatagattagatacattatttattgaatgaatttaaaaaat 5924528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 456 - 528
Target Start/End: Original strand, 20788104 - 20788176
Alignment:
Q  456 aatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggagga 528  Q
    ||||||||| | ||||| |||||| | ||||||  || ||||| | |||||||||||||||||| ||||||||    
T  20788104 aatatagaccacatacaacatttaatgaatgaacctagaaaatgaatttttgcttataatagtgaccggagga 20788176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 455 - 527
Target Start/End: Complemental strand, 28702133 - 28702061
Alignment:
Q  455 taatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggagg 527  Q
    ||||| |||||| |||||||||||| | ||||||| ||||||  ||  ||||||||||| ||||| |||||||    
T  28702133 taataaagactacatacatcatttaatgaatgaatctaaaaatcaaacttttgcttatattagtgaccggagg 28702061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 474 - 526
Target Start/End: Complemental strand, 31280386 - 31280334
Alignment:
Q  474 catttattcaatgaatttaaaaaataattttttgcttataatagtggccggag 526  Q
    |||||||| ||||||| ||||||||  | ||||||||||||||||| ||||||    
T  31280386 catttattgaatgaatctaaaaaatggtgttttgcttataatagtgaccggag 31280334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 464 - 516
Target Start/End: Original strand, 46543656 - 46543708
Alignment:
Q  464 ctatatacatcatttattcaatgaatttaaaaaataattttttgcttataata 516  Q
    |||||||||||||||||| ||||||| |||||||| | ||||  |||||||||    
T  46543656 ctatatacatcatttattaaatgaatctaaaaaattaattttgccttataata 46543708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 455 - 527
Target Start/End: Original strand, 56328518 - 56328590
Alignment:
Q  455 taatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggagg 527  Q
    ||||| ||||||||| ||||||| | | ||||||| |||||  || ||||||||||||| ||||| |||||||    
T  56328518 taataaagactatatgcatcattaaatgaatgaatctaaaatgtagttttttgcttatattagtgaccggagg 56328590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 391 - 527
Target Start/End: Original strand, 11073465 - 11073604
Alignment:
Q  391 cggtcactattataattaaaaacttactttttagattcattgaacgattgatatatgagatcattaatata----gactatatacatcatttattcaatg 486  Q
    ||||||||||||||| |||||  |||||| ||||||| || ||| || ||||||||| || ||||||||||    ||  | |||||||||||||| ||||    
T  11073465 cggtcactattataagtaaaatattacttgttagattaatagaatgagtgatatatgtgaccattaatatatatagatcaaatacatcatttatttaatg 11073564  T
Q  487 aatttaaaaaataattttttgcttataatagtggccggagg 527  Q
    ||  ||||| |||||||||||||||||||| || |||||||    
T  11073565 aacctaaaa-ataattttttgcttataataatgaccggagg 11073604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 466 - 514
Target Start/End: Complemental strand, 3846492 - 3846444
Alignment:
Q  466 atatacatcatttattcaatgaatttaaaaaataattttttgcttataa 514  Q
    |||||||| |||||||||||||| ||||||||| |||||||||||||||    
T  3846492 atatacattatttattcaatgaacttaaaaaattattttttgcttataa 3846444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 457 - 529
Target Start/End: Complemental strand, 8029579 - 8029507
Alignment:
Q  457 atatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggaggaa 529  Q
    |||||| ||| ||||||||||||||||||||||||||||  | |||| || ||||||||| || |||||||||    
T  8029579 atatagtctaaatacatcatttattcaatgaatttaaaatgtgatttgtttcttataataatgaccggaggaa 8029507  T

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Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 466 - 526
Target Start/End: Complemental strand, 11637231 - 11637171
Alignment:
Q  466 atatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggag 526  Q
    |||||||||||| ||| |||||||||||||  |||| ||||||||||||||||| ||||||    
T  11637231 atatacatcattaattgaatgaatttaaaatgtaatgttttgcttataatagtgaccggag 11637171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 415 - 519
Target Start/End: Complemental strand, 14173502 - 14173398
Alignment:
Q  415 tactttttagattcattgaacgattgatatatgagatcattaatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataa 514  Q
    ||||| ||||||||||| ||  | |||| |||| | ||| || ||||||||| |||| ||||||||| ||||||| |||||| ||  |||||||||||||    
T  14173502 tacttcttagattcattcaataaatgatgtatgtggtcaatattatagactacatacttcatttattgaatgaatctaaaaattagatttttgcttataa 14173403  T
Q  515 tagtg 519  Q
    |||||    
T  14173402 tagtg 14173398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 415 - 519
Target Start/End: Complemental strand, 14178038 - 14177934
Alignment:
Q  415 tactttttagattcattgaacgattgatatatgagatcattaatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataa 514  Q
    ||||| ||||||||||| ||  | |||| |||| | ||| || ||||||||| |||| ||||||||| ||||||| |||||| ||  |||||||||||||    
T  14178038 tacttcttagattcattcaataaatgatgtatgtggtcaatattatagactacatacttcatttattgaatgaatctaaaaattagatttttgcttataa 14177939  T
Q  515 tagtg 519  Q
    |||||    
T  14177938 tagtg 14177934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 468 - 534
Target Start/End: Complemental strand, 33472745 - 33472679
Alignment:
Q  468 atacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggaggaagtact 534  Q
    |||||||| | ||| |||||||||||||||||  ||||| |||||||||||||| ||||| ||||||    
T  33472745 atacatcactcatttaatgaatttaaaaaatatgtttttacttataatagtggcgggagggagtact 33472679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 395 - 485
Target Start/End: Original strand, 33472694 - 33472784
Alignment:
Q  395 cactattataattaaaaacttactttttagattcattgaacgattgatatatgagatcattaatatagactatatacatcatttattcaat 485  Q
    ||||||||||| ||||||| || |||||| ||||||| || || |||| |||| |||||||||||||||  | |||||| |||||| ||||    
T  33472694 cactattataagtaaaaacatattttttaaattcattaaatgagtgatgtatgtgatcattaatatagatcaaatacattatttatccaat 33472784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 457 - 518
Target Start/End: Complemental strand, 18491731 - 18491670
Alignment:
Q  457 atatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagt 518  Q
    |||||||||| ||||||||||| || ||||||| |||||| | ||||||| |||||||||||    
T  18491731 atatagactacatacatcatttgttaaatgaatctaaaaagtgatttttttcttataatagt 18491670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 456 - 532
Target Start/End: Complemental strand, 3203742 - 3203666
Alignment:
Q  456 aatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggaggaagta 532  Q
    ||||||||||  |||||||||| ||| ||||||  ||||||||   |||||||||||||||||| ||||||| ||||    
T  3203742 aatatagacttgatacatcattcattgaatgaacctaaaaaattgatttttgcttataatagtgaccggagggagta 3203666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 468 - 500
Target Start/End: Original strand, 12154066 - 12154098
Alignment:
Q  468 atacatcatttattcaatgaatttaaaaaataa 500  Q
    |||||||||||||||||||||||||||||||||    
T  12154066 atacatcatttattcaatgaatttaaaaaataa 12154098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 388 - 496
Target Start/End: Complemental strand, 16121104 - 16120996
Alignment:
Q  388 ctccggtcactattataattaaaaacttactttttagattcattgaacgattgatatatgagatcattaatatagactatatacatcatttattcaatga 487  Q
    ||||| ||||||||||||  |||||   |||||||||||||||| ||  | |||| |||  | ||| |||||||||| |  ||||||||||||| |||||    
T  16121104 ctccgatcactattataagcaaaaatcaactttttagattcattaaataaatgatgtatttggtcaataatatagaccaagtacatcatttattgaatga 16121005  T
Q  488 atttaaaaa 496  Q
    |||||||||    
T  16121004 atttaaaaa 16120996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 388 - 495
Target Start/End: Complemental strand, 10258443 - 10258336
Alignment:
Q  388 ctccggtcactattataattaaaaacttactttttagattcattgaacgattgatatatgagatcattaatatagactatatacatcatttattcaatga 487  Q
    ||||| ||| |||||||| |||||| | |||||||||||||||| ||  | |||| |||  | |||||| ||||||| || ||||||||||| | |||||    
T  10258443 ctccgatcattattataagtaaaaaataactttttagattcattcaattaatgatgtatatggtcattattatagaccatgtacatcatttaataaatga 10258344  T
Q  488 atttaaaa 495  Q
    || |||||    
T  10258343 atctaaaa 10258336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 468 - 519
Target Start/End: Original strand, 15718474 - 15718525
Alignment:
Q  468 atacatcatttattcaatgaatttaaaaaataattttttgcttataatagtg 519  Q
    |||||||||||||| ||||||||| |||| | | ||||||||||||||||||    
T  15718474 atacatcatttattgaatgaattttaaaagtgaatttttgcttataatagtg 15718525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 459 - 518
Target Start/End: Original strand, 30013830 - 30013889
Alignment:
Q  459 atagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagt 518  Q
    ||||||||||||||||| ||||||||||| ||||| || |  ||| ||||||||||||||    
T  30013830 atagactatatacatcaattattcaatgattttaacaagttgtttcttgcttataatagt 30013889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 466 - 528
Target Start/End: Original strand, 8449655 - 8449717
Alignment:
Q  466 atatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggagga 528  Q
    |||| ||||||| ||| ||||||| ||||| || | |||||||||||||||||| ||||||||    
T  8449655 atatgcatcattaattgaatgaatctaaaatattaatttttgcttataatagtgaccggagga 8449717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 466 - 528
Target Start/End: Original strand, 8458459 - 8458521
Alignment:
Q  466 atatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggagga 528  Q
    |||| ||||||| ||| ||||||| ||||| || | |||||||||||||||||| ||||||||    
T  8458459 atatgcatcattaattgaatgaatctaaaatattaatttttgcttataatagtgaccggagga 8458521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 389 - 519
Target Start/End: Complemental strand, 12383727 - 12383597
Alignment:
Q  389 tccggtcactattataattaaaaacttactttttagattcattgaacgattgatatatgagatcattaatatagactatatacatcatttattcaatgaa 488  Q
    |||||||||||||||||  |||||  ||| ||||||||| ||| ||  | |||| ||   |||| ||| ||||||||| |||||||||| |   ||||||    
T  12383727 tccggtcactattataaacaaaaatctacattttagattaattcaattaatgatgtacatgatctttattatagactacatacatcattaaccgaatgaa 12383628  T
Q  489 tttaaaaaataattttttgcttataatagtg 519  Q
    |||||||  ||| ||||| ||||||||||||    
T  12383627 tttaaaatgtaaatttttacttataatagtg 12383597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 468 - 513
Target Start/End: Original strand, 8030396 - 8030441
Alignment:
Q  468 atacatcatttattcaatgaatttaaaaaataattttttgcttata 513  Q
    |||||| ||||||| ||||||||||||| |||| ||||||||||||    
T  8030396 atacattatttattgaatgaatttaaaagataaatttttgcttata 8030441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 462 - 519
Target Start/End: Complemental strand, 29418999 - 29418942
Alignment:
Q  462 gactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtg 519  Q
    ||||| |||||||||| ||| ||| ||| |||||  ||||||||||||||||||||||    
T  29418999 gactacatacatcattaattgaattaatgtaaaatgtaattttttgcttataatagtg 29418942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 468 - 532
Target Start/End: Original strand, 3203752 - 3203816
Alignment:
Q  468 atacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggaggaagta 532  Q
    |||||||||||||| ||||||  |||||| |   |||||||||||||||||| | ||||||||||    
T  3203752 atacatcatttattaaatgaacctaaaaagttgatttttgcttataatagtgactggaggaagta 3203816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 455 - 527
Target Start/End: Original strand, 6560725 - 6560797
Alignment:
Q  455 taatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggagg 527  Q
    ||||| ||||||| | ||||||| | | ||||||| |||||  |||||||||||||||| ||||| |||||||    
T  6560725 taataaagactatgtgcatcattaaatgaatgaatctaaaatgtaattttttgcttatattagtgaccggagg 6560797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 458 - 514
Target Start/End: Complemental strand, 8051047 - 8050991
Alignment:
Q  458 tatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataa 514  Q
    |||||| ||||||||| | |||||||||  ||||||||||| |||||||| ||||||    
T  8051047 tatagattatatacattaattattcaatatatttaaaaaattattttttggttataa 8050991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 455 - 527
Target Start/End: Original strand, 8146017 - 8146089
Alignment:
Q  455 taatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggagg 527  Q
    ||||| |||| || ||||||||| | | ||||||| |||||  |||||||||||||||| ||||| |||||||    
T  8146017 taataaagaccatgtacatcattaaatgaatgaatctaaaatgtaattttttgcttatattagtgaccggagg 8146089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 455 - 527
Target Start/End: Complemental strand, 15517162 - 15517091
Alignment:
Q  455 taatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggagg 527  Q
    ||||| |||| |||||||||||||| | ||||||| |||||  ||  |||||||||||||||||| |||||||    
T  15517162 taataaagacgatatacatcatttaatgaatgaatctaaaat-tatgtttttgcttataatagtgaccggagg 15517091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 468 - 532
Target Start/End: Original strand, 16121046 - 16121110
Alignment:
Q  468 atacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggaggaagta 532  Q
    |||||||||||||| ||||||| |||||| |   ||||||||||||||||||  |||||| ||||    
T  16121046 atacatcatttatttaatgaatctaaaaagttgatttttgcttataatagtgatcggagggagta 16121110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 455 - 527
Target Start/End: Complemental strand, 34379807 - 34379736
Alignment:
Q  455 taatatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggagg 527  Q
    ||||| |||| |||||||||||||| | ||||||| |||||  ||  |||||||||||||||||| |||||||    
T  34379807 taataaagacgatatacatcatttaatgaatgaatctaaaat-tatgtttttgcttataatagtgaccggagg 34379736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0531 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0531
Description:

Target: scaffold0531; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 457 - 530
Target Start/End: Original strand, 6924 - 6997
Alignment:
Q  457 atatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggaggaag 530  Q
    |||||| ||| ||||||||||||||||||||||||||||  | |||| |||||||||||| || ||||||||||    
T  6924 atatagtctaaatacatcatttattcaatgaatttaaaatgtgatttgttgcttataataatgaccggaggaag 6997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 458 - 527
Target Start/End: Original strand, 24677 - 24746
Alignment:
Q  458 tatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagtggccggagg 527  Q
    ||||||| | |||||||||||| | ||||||| ||||| || | |||||||||||||||||| |||||||    
T  24677 tatagaccacatacatcatttaatgaatgaatctaaaatattaatttttgcttataatagtgaccggagg 24746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 458 - 518
Target Start/End: Original strand, 135847 - 135907
Alignment:
Q  458 tatagactatatacatcatttattcaatgaatttaaaaaataattttttgcttataatagt 518  Q
    ||||||||| |||||| | ||| ||||||| | |||||| ||||| |||||||||||||||    
T  135847 tatagactaaatacataagttaatcaatgagtctaaaaagtaattgtttgcttataatagt 135907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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