View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5174-Insertion-3 (Length: 628)
Name: NF5174-Insertion-3
Description: NF5174
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5174-Insertion-3 |
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Alignment Details
Target: chr7 (Bit Score: 547; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 547; E-Value: 0
Query Start/End: Original strand, 67 - 625
Target Start/End: Complemental strand, 30215477 - 30214919
Alignment:
| Q |
67 |
cccttcacacattcattccaaaatcttcaaattcatccaccaagttcctatttttcatcttccaaagcttcaaattcttcttcatcttcataaaaatcac |
166 |
Q |
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| T |
30215477 |
cccttcacacattcattccaaaatcttcaaattcatccaccaagttcctatttttcatcttccaaagcttaaaattcttcttcatcttcataaaaatcac |
30215378 |
T |
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| Q |
167 |
acctttacaatgacccatcatcatttttgctattatctcacactcttttaccttattcttcactgtgtaaccctttctcactcaattgatattcacccac |
266 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30215377 |
acctttacaatgacccatcatcatttttgctattatctcacactcttttaccttattcttcactgtgtaaccctttctcactcaattgatattcacccac |
30215278 |
T |
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| Q |
267 |
aagacaaaaaatctcttttattgttcaaatcatcattgcatgaccctagccaaagtttaaccaactgggttggttcaaattgcactacatgggttggaat |
366 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30215277 |
aagacaaaaaatctcttttattgttcaaatcatcattgcatgaccctagccaaagtttaaccaactgggttggttcaaattgcactacatgggttggaat |
30215178 |
T |
|
| Q |
367 |
cacttgtgaaaatactactggtagagtggtttcaatcaacctaaacagtatgaatttgtcaggtcaaatccaccccaatttttgcaaccttttgtatctt |
466 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30215177 |
cacttgtgaaaatactactggtagagtggtttcaatcaacctaaacagtatgaatttgtcaggtcaaatccaccccaatttttgcaaccttttgtatctt |
30215078 |
T |
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| Q |
467 |
gaaaaagtggatttttcacacaataattttacatgcactctacctgtttgttttggagacttattgaaccttagagttattgatcttagtcataataggt |
566 |
Q |
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||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30215077 |
gaaaaagtggatttttcacacaataatttcacatgcactctacctgtttgttttggagacttattgaaccttagagttattgatcttagtcataataggt |
30214978 |
T |
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| Q |
567 |
ttcatggtggaataccaaagtctttcatgaggcttaagcatctcaccgagcttgttttg |
625 |
Q |
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| T |
30214977 |
ttcatggtggaataccaaactctttcatgaggcttaagcatctcaccgagcttgttttg |
30214919 |
T |
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